HEADER TRANSPORT PROTEIN 20-MAY-05 2CRF TITLE SOLUTION STRUCTURE OF THE RAN_BP1 DOMAIN OF RAN-BINDING PROTEIN-3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: RAN BINDING PROTEIN 3; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RAN_BP1 DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RANBP3; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P041004-03; SOURCE 8 OTHER_DETAILS: CELL FREE PROTEIN SYNTHESIS KEYWDS RAN_BP1 DOMAIN, RAN-BINDING PROTEIN 3, RANBP3, STRUCTURAL GENOMICS, KEYWDS 2 NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL KEYWDS 3 ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, KEYWDS 4 TRANSPORT PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR H.P.ZHANG,T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 09-MAR-22 2CRF 1 REMARK SEQADV SHEET REVDAT 2 24-FEB-09 2CRF 1 VERSN REVDAT 1 20-NOV-05 2CRF 0 JRNL AUTH H.P.ZHANG,T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE RAN_BP1 DOMAIN OF RAN-BINDING JRNL TITL 2 PROTEIN-3 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMR 6.1C, CYANA 2.0.17 REMARK 3 AUTHORS : VARIAN (VNMR), GUNTERT,P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2CRF COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-MAY-05. REMARK 100 THE DEPOSITION ID IS D_1000024541. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.37MM 13C, 15N-LABELED PROTEIN; REMARK 210 20MM D-TRIS-HCL (PH7.0); 200MM REMARK 210 NACL; 1MM D-DTT; 0.02% NAN3 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 900 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20031121, NMRVIEW 5.04, REMARK 210 KUJIRA 0.9296, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES WITH REMARK 210 THE LOWEST ENERGY, STRUCTURES REMARK 210 WITH THE LEAST RESTRAINT REMARK 210 VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 3 118.24 -163.32 REMARK 500 1 THR A 8 109.30 -44.41 REMARK 500 1 ALA A 9 41.52 -84.64 REMARK 500 1 GLU A 23 33.45 35.04 REMARK 500 1 ALA A 25 39.26 36.40 REMARK 500 1 VAL A 29 -74.71 -55.16 REMARK 500 1 LYS A 41 -29.63 -37.69 REMARK 500 1 LEU A 67 99.38 -68.39 REMARK 500 1 SER A 78 39.69 -97.32 REMARK 500 1 LEU A 79 30.75 36.49 REMARK 500 1 LYS A 99 -31.46 -130.25 REMARK 500 1 ARG A 135 -31.34 -37.27 REMARK 500 2 GLU A 15 35.97 -83.79 REMARK 500 2 ALA A 25 41.29 -97.66 REMARK 500 2 VAL A 29 -70.61 -58.68 REMARK 500 2 LYS A 41 -27.15 -38.09 REMARK 500 2 LEU A 67 99.72 -68.87 REMARK 500 2 ASN A 84 105.69 -161.97 REMARK 500 2 GLN A 90 32.30 -84.05 REMARK 500 2 GLN A 111 35.99 39.41 REMARK 500 2 ALA A 131 -70.19 -64.88 REMARK 500 2 LEU A 132 -70.13 -37.91 REMARK 500 2 LEU A 137 -31.39 -37.70 REMARK 500 3 ALA A 9 145.34 -172.24 REMARK 500 3 CYS A 12 168.04 -47.79 REMARK 500 3 ALA A 25 43.94 -94.96 REMARK 500 3 LYS A 41 -35.16 -33.87 REMARK 500 3 GLN A 90 31.95 -84.37 REMARK 500 3 LEU A 128 -70.32 -50.58 REMARK 500 4 SER A 3 42.41 70.41 REMARK 500 4 CYS A 12 98.40 -39.15 REMARK 500 4 GLU A 15 73.12 -69.14 REMARK 500 4 GLU A 18 -36.70 -36.33 REMARK 500 4 THR A 21 153.51 -45.85 REMARK 500 4 ALA A 25 42.36 -83.14 REMARK 500 4 GLN A 44 43.03 36.86 REMARK 500 4 THR A 62 -60.62 -98.76 REMARK 500 4 GLN A 76 40.08 -81.84 REMARK 500 4 GLN A 90 31.51 -83.72 REMARK 500 4 GLN A 111 43.79 38.92 REMARK 500 4 SER A 122 -33.61 -36.30 REMARK 500 4 LEU A 132 -70.90 -53.76 REMARK 500 5 SER A 3 -49.01 -133.24 REMARK 500 5 GLU A 15 37.19 -91.82 REMARK 500 5 LYS A 41 -34.02 -33.21 REMARK 500 5 GLN A 44 48.38 38.03 REMARK 500 5 LEU A 79 75.71 -61.73 REMARK 500 5 GLN A 90 32.78 -82.87 REMARK 500 5 GLN A 111 49.00 38.87 REMARK 500 5 SER A 122 -31.94 -35.80 REMARK 500 REMARK 500 THIS ENTRY HAS 201 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR DETERMINED REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSS001002253.1 RELATED DB: TARGETDB DBREF 2CRF A 8 144 UNP Q9H6Z4 RANB3_HUMAN 375 511 SEQADV 2CRF GLY A 1 UNP Q9H6Z4 CLONING ARTIFACT SEQADV 2CRF SER A 2 UNP Q9H6Z4 CLONING ARTIFACT SEQADV 2CRF SER A 3 UNP Q9H6Z4 CLONING ARTIFACT SEQADV 2CRF GLY A 4 UNP Q9H6Z4 CLONING ARTIFACT SEQADV 2CRF SER A 5 UNP Q9H6Z4 CLONING ARTIFACT SEQADV 2CRF SER A 6 UNP Q9H6Z4 CLONING ARTIFACT SEQADV 2CRF GLY A 7 UNP Q9H6Z4 CLONING ARTIFACT SEQADV 2CRF SER A 145 UNP Q9H6Z4 CLONING ARTIFACT SEQADV 2CRF GLY A 146 UNP Q9H6Z4 CLONING ARTIFACT SEQADV 2CRF PRO A 147 UNP Q9H6Z4 CLONING ARTIFACT SEQADV 2CRF SER A 148 UNP Q9H6Z4 CLONING ARTIFACT SEQADV 2CRF SER A 149 UNP Q9H6Z4 CLONING ARTIFACT SEQADV 2CRF GLY A 150 UNP Q9H6Z4 CLONING ARTIFACT SEQRES 1 A 150 GLY SER SER GLY SER SER GLY THR ALA ARG LYS CYS LEU SEQRES 2 A 150 LEU GLU LYS VAL GLU VAL ILE THR GLY GLU GLU ALA GLU SEQRES 3 A 150 SER ASN VAL LEU GLN MET GLN CYS LYS LEU PHE VAL PHE SEQRES 4 A 150 ASP LYS THR SER GLN SER TRP VAL GLU ARG GLY ARG GLY SEQRES 5 A 150 LEU LEU ARG LEU ASN ASP MET ALA SER THR ASP ASP GLY SEQRES 6 A 150 THR LEU GLN SER ARG LEU VAL MET ARG THR GLN GLY SER SEQRES 7 A 150 LEU ARG LEU ILE LEU ASN THR LYS LEU TRP ALA GLN MET SEQRES 8 A 150 GLN ILE ASP LYS ALA SER GLU LYS SER ILE HIS ILE THR SEQRES 9 A 150 ALA MET ASP THR GLU ASP GLN GLY VAL LYS VAL PHE LEU SEQRES 10 A 150 ILE SER ALA SER SER LYS ASP THR GLY GLN LEU TYR ALA SEQRES 11 A 150 ALA LEU HIS HIS ARG ILE LEU ALA LEU ARG SER ARG VAL SEQRES 12 A 150 GLU SER GLY PRO SER SER GLY HELIX 1 1 ASP A 124 VAL A 143 1 20 SHEET 1 A 6 SER A 27 ASP A 40 0 SHEET 2 A 6 SER A 45 ALA A 60 -1 SHEET 3 A 6 LEU A 67 THR A 75 -1 SHEET 4 A 6 LEU A 81 LYS A 86 -1 SHEET 5 A 6 SER A 100 MET A 106 -1 SHEET 6 A 6 VAL A 113 SER A 119 -1 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1