data_2D3H # _entry.id 2D3H # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2D3H pdb_00002d3h 10.2210/pdb2d3h/pdb RCSB RCSB024940 ? ? WWPDB D_1000024940 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2CUO 'Collagen Model Peptide (Pro-Pro-Gly)9' unspecified PDB 1X1K 'Host-Guest Peptide (Pro-Pro-Gly)4-(Pro-Allohyp-Gly)-(Pro- Pro-Gly)4' unspecified PDB 1V4F 'Crystal Structures Of Collagen Model Peptides With Pro-Hyp-Gly Sequence At 1.3A' unspecified PDB 1V6Q 'Crystal Structures Of Collagen Model Peptides With Pro-Hyp-Gly Sequence At 1.3A' unspecified PDB 1V7H 'Crystal Structures Of Collagen Model Peptides With Pro-Hyp-Gly Sequence At 1.26A' unspecified PDB 1YM8 'Crystal Structure Of Gzz Shows Up Puckering Of The Proline Ring In The Xaa Position' unspecified PDB 2D3F 'CRYSTAL STRUCTURES OF COLLAGEN MODEL PEPTIDES (PRO-PRO-GLY)4-PRO-HYP-GLY-(PRO-PRO-GLY)4' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2D3H _pdbx_database_status.recvd_initial_deposition_date 2005-09-28 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wu, G.' 1 'Noguchi, K.' 2 'Okuyama, K.' 3 'Mizuno, K.' 4 'Bachinger, H.P.' 5 # _citation.id primary _citation.title ;High-resolution structures of collagen-like peptides [(Pro-Pro-Gly)(4)-Xaa-Yaa-Gly-(Pro-Pro-Gly)(4)]: Implications for triple-helix hydration and Hyp(X) puckering. ; _citation.journal_abbrev Biopolymers _citation.journal_volume 91 _citation.page_first 361 _citation.page_last 372 _citation.year 2009 _citation.journal_id_ASTM BIPMAA _citation.country US _citation.journal_id_ISSN 0006-3525 _citation.journal_id_CSD 0161 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19137577 _citation.pdbx_database_id_DOI 10.1002/bip.21138 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Okuyama, K.' 1 ? primary 'Hongo, C.' 2 ? primary 'Wu, G.' 3 ? primary 'Mizuno, K.' 4 ? primary 'Noguchi, K.' 5 ? primary 'Ebisuzaki, S.' 6 ? primary 'Tanaka, Y.' 7 ? primary 'Nishino, N.' 8 ? primary 'Bachinger, H.P.' 9 ? # _cell.entry_id 2D3H _cell.length_a 25.987 _cell.length_b 26.668 _cell.length_c 79.843 _cell.angle_alpha 90.00 _cell.angle_beta 90.03 _cell.angle_gamma 90.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2D3H _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'COLLAGEN MODEL PEPTIDES (PRO-PRO-GLY)4-HYP-HYP-GLY-(PRO-PRO-GLY)4' 2311.547 6 ? ? ? ? 2 water nat water 18.015 263 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'PPGPPGPPGPPG(HYP)(HYP)GPPGPPGPPGPPG' _entity_poly.pdbx_seq_one_letter_code_can PPGPPGPPGPPGPPGPPGPPGPPGPPG _entity_poly.pdbx_strand_id A,B,C,D,E,F _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 PRO n 1 3 GLY n 1 4 PRO n 1 5 PRO n 1 6 GLY n 1 7 PRO n 1 8 PRO n 1 9 GLY n 1 10 PRO n 1 11 PRO n 1 12 GLY n 1 13 HYP n 1 14 HYP n 1 15 GLY n 1 16 PRO n 1 17 PRO n 1 18 GLY n 1 19 PRO n 1 20 PRO n 1 21 GLY n 1 22 PRO n 1 23 PRO n 1 24 GLY n 1 25 PRO n 1 26 PRO n 1 27 GLY n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'THIS COLLAGEN MODEL TRIPLETT WAS CHEMICALLY SYSTHESIZED. Hyp-Hyp-Gly guest in Pro-Pro-Gly host peptide.' # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 2D3H _struct_ref.pdbx_db_accession 2D3H _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2D3H A 1 ? 27 ? 2D3H 1 ? 27 ? 1 27 2 1 2D3H B 1 ? 27 ? 2D3H 1 ? 27 ? 1 27 3 1 2D3H C 1 ? 27 ? 2D3H 1 ? 27 ? 1 27 4 1 2D3H D 1 ? 27 ? 2D3H 1 ? 27 ? 1 27 5 1 2D3H E 1 ? 27 ? 2D3H 1 ? 27 ? 1 27 6 1 2D3H F 1 ? 27 ? 2D3H 1 ? 27 ? 1 27 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 HYP 'L-peptide linking' n 4-HYDROXYPROLINE HYDROXYPROLINE 'C5 H9 N O3' 131.130 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 # _exptl.entry_id 2D3H _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.83 _exptl_crystal.density_percent_sol 32.6 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_details 'PEG 1000, ACETATE BUFFER, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 95 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2004-09-30 _diffrn_detector.details '1.1-M-LONG BENT-PLANE MIRROR' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Trianglualr Si(111) with an asymmetric angle of 7.8' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.978 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-6A' _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline BL-6A _diffrn_source.pdbx_wavelength 0.978 _diffrn_source.pdbx_wavelength_list 0.978 # _reflns.entry_id 2D3H _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F 1.0 _reflns.d_resolution_low 26.61 _reflns.d_resolution_high 1.22 _reflns.number_obs 32577 _reflns.number_all ? _reflns.percent_possible_obs 98.7 _reflns.pdbx_Rmerge_I_obs 0.082 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 4.5 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.52 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.22 _reflns_shell.d_res_low 1.26 _reflns_shell.percent_possible_all 99.8 _reflns_shell.Rmerge_I_obs 0.287 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.2 _reflns_shell.pdbx_redundancy 3.79 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2D3H _refine.ls_number_reflns_obs 32044 _refine.ls_number_reflns_all 32044 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.00 _refine.ls_d_res_high 1.22 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.1964 _refine.ls_R_factor_all 0.1964 _refine.ls_R_factor_R_work 0.1934 _refine.ls_R_factor_R_free 0.2548 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1627 _refine.ls_number_parameters 10425 _refine.ls_number_restraints 12967 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;THE POLYMER STRUCTURE CAN BE GENERATED FROM THE SUBMITTED ASYMMETRIC UNIT BY APPLYING THE (0 0 1) TRANSLATION USING FRACTIONAL COORDINATES. BOTH UP- AND DOWN- PUCKERINGS WERE OBSERVED FOR PROLINE RING AT THE X POSITION OF THE GLY-X-Y SEQUENCE. ANISOTROPIC REFINEMENT REDUCED FREE R. ; _refine.pdbx_starting_model 'PDB 2CUO' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2D3H _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 0 _refine_analyze.occupancy_sum_hydrogen 823.00 _refine_analyze.occupancy_sum_non_hydrogen 1158.00 _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 895 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 263 _refine_hist.number_atoms_total 1158 _refine_hist.d_res_high 1.22 _refine_hist.d_res_low 8.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.010 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.024 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.0282 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.059 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.047 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.145 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.004 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.046 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.076 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.entry_id 2D3H _pdbx_refine.R_factor_all_no_cutoff 0.1964 _pdbx_refine.R_factor_obs_no_cutoff 0.1934 _pdbx_refine.free_R_factor_no_cutoff 0.2548 _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 5.1 _pdbx_refine.free_R_val_test_set_ct_no_cutoff 1627 _pdbx_refine.R_factor_all_4sig_cutoff 0.1905 _pdbx_refine.R_factor_obs_4sig_cutoff 0.1875 _pdbx_refine.free_R_factor_4sig_cutoff 0.2483 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 5.1 _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 1431 _pdbx_refine.number_reflns_obs_4sig_cutoff 28103 _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _struct.entry_id 2D3H _struct.title 'Crystal structures of collagen model peptides (Pro-Pro-Gly)4-Hyp-Hyp-Gly-(Pro-Pro-Gly)4' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2D3H _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN' _struct_keywords.text 'COLLAGEN, TRIPLE-HELIX, HYDROXYPROLINE, STRUCTURAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 2 ? K N N 2 ? L N N 2 ? # loop_ _struct_biol.id _struct_biol.pdbx_parent_biol_id _struct_biol.details 1 ? ? 2 ? ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLY 12 C ? ? ? 1_555 A HYP 13 N ? ? A GLY 12 A HYP 13 1_555 ? ? ? ? ? ? ? 1.344 ? ? covale2 covale both ? A HYP 13 C ? ? ? 1_555 A HYP 14 N ? ? A HYP 13 A HYP 14 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale3 covale both ? A HYP 14 C ? ? ? 1_555 A GLY 15 N ? ? A HYP 14 A GLY 15 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale4 covale both ? B GLY 12 C ? ? ? 1_555 B HYP 13 N ? ? B GLY 12 B HYP 13 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale5 covale both ? B HYP 13 C ? ? ? 1_555 B HYP 14 N ? ? B HYP 13 B HYP 14 1_555 ? ? ? ? ? ? ? 1.307 ? ? covale6 covale both ? B HYP 14 C ? ? ? 1_555 B GLY 15 N ? ? B HYP 14 B GLY 15 1_555 ? ? ? ? ? ? ? 1.305 ? ? covale7 covale both ? C GLY 12 C ? ? ? 1_555 C HYP 13 N ? ? C GLY 12 C HYP 13 1_555 ? ? ? ? ? ? ? 1.317 ? ? covale8 covale both ? C HYP 13 C ? ? ? 1_555 C HYP 14 N ? ? C HYP 13 C HYP 14 1_555 ? ? ? ? ? ? ? 1.306 ? ? covale9 covale both ? C HYP 14 C ? ? ? 1_555 C GLY 15 N ? ? C HYP 14 C GLY 15 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale10 covale both ? D GLY 12 C ? ? ? 1_555 D HYP 13 N ? ? D GLY 12 D HYP 13 1_555 ? ? ? ? ? ? ? 1.347 ? ? covale11 covale both ? D HYP 13 C ? ? ? 1_555 D HYP 14 N ? ? D HYP 13 D HYP 14 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale12 covale both ? D HYP 14 C ? ? ? 1_555 D GLY 15 N ? ? D HYP 14 D GLY 15 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale13 covale both ? E GLY 12 C ? ? ? 1_555 E HYP 13 N ? ? E GLY 12 E HYP 13 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale14 covale both ? E HYP 13 C ? ? ? 1_555 E HYP 14 N ? ? E HYP 13 E HYP 14 1_555 ? ? ? ? ? ? ? 1.310 ? ? covale15 covale both ? E HYP 14 C ? ? ? 1_555 E GLY 15 N ? ? E HYP 14 E GLY 15 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale16 covale both ? F GLY 12 C ? ? ? 1_555 F HYP 13 N ? ? F GLY 12 F HYP 13 1_555 ? ? ? ? ? ? ? 1.304 ? ? covale17 covale both ? F HYP 13 C ? ? ? 1_555 F HYP 14 N ? ? F HYP 13 F HYP 14 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale18 covale both ? F HYP 14 C ? ? ? 1_555 F GLY 15 N ? ? F HYP 14 F GLY 15 1_555 ? ? ? ? ? ? ? 1.327 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 2D3H _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _atom_sites.entry_id 2D3H _atom_sites.fract_transf_matrix[1][1] 0.038481 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000020 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.037498 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012525 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 1 1 PRO PRO A . n A 1 2 PRO 2 2 2 PRO PRO A . n A 1 3 GLY 3 3 3 GLY GLY A . n A 1 4 PRO 4 4 4 PRO PRO A . n A 1 5 PRO 5 5 5 PRO PRO A . n A 1 6 GLY 6 6 6 GLY GLY A . n A 1 7 PRO 7 7 7 PRO PRO A . n A 1 8 PRO 8 8 8 PRO PRO A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 PRO 11 11 11 PRO PRO A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 HYP 13 13 13 HYP HYP A . n A 1 14 HYP 14 14 14 HYP HYP A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 PRO 16 16 16 PRO PRO A . n A 1 17 PRO 17 17 17 PRO PRO A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 PRO 20 20 20 PRO PRO A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 PRO 22 22 22 PRO PRO A . n A 1 23 PRO 23 23 23 PRO PRO A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 PRO 25 25 ? ? ? A . n A 1 26 PRO 26 26 ? ? ? A . n A 1 27 GLY 27 27 ? ? ? A . n B 1 1 PRO 1 1 1 PRO PRO B . n B 1 2 PRO 2 2 2 PRO PRO B . n B 1 3 GLY 3 3 3 GLY GLY B . n B 1 4 PRO 4 4 4 PRO PRO B . n B 1 5 PRO 5 5 5 PRO PRO B . n B 1 6 GLY 6 6 6 GLY GLY B . n B 1 7 PRO 7 7 7 PRO PRO B . n B 1 8 PRO 8 8 8 PRO PRO B . n B 1 9 GLY 9 9 9 GLY GLY B . n B 1 10 PRO 10 10 10 PRO PRO B . n B 1 11 PRO 11 11 11 PRO PRO B . n B 1 12 GLY 12 12 12 GLY GLY B . n B 1 13 HYP 13 13 13 HYP HYP B . n B 1 14 HYP 14 14 14 HYP HYP B . n B 1 15 GLY 15 15 15 GLY GLY B . n B 1 16 PRO 16 16 16 PRO PRO B . n B 1 17 PRO 17 17 17 PRO PRO B . n B 1 18 GLY 18 18 18 GLY GLY B . n B 1 19 PRO 19 19 19 PRO PRO B . n B 1 20 PRO 20 20 20 PRO PRO B . n B 1 21 GLY 21 21 21 GLY GLY B . n B 1 22 PRO 22 22 22 PRO PRO B . n B 1 23 PRO 23 23 23 PRO PRO B . n B 1 24 GLY 24 24 24 GLY GLY B . n B 1 25 PRO 25 25 ? ? ? B . n B 1 26 PRO 26 26 ? ? ? B . n B 1 27 GLY 27 27 ? ? ? B . n C 1 1 PRO 1 1 1 PRO PRO C . n C 1 2 PRO 2 2 2 PRO PRO C . n C 1 3 GLY 3 3 3 GLY GLY C . n C 1 4 PRO 4 4 4 PRO PRO C . n C 1 5 PRO 5 5 5 PRO PRO C . n C 1 6 GLY 6 6 6 GLY GLY C . n C 1 7 PRO 7 7 7 PRO PRO C . n C 1 8 PRO 8 8 8 PRO PRO C . n C 1 9 GLY 9 9 9 GLY GLY C . n C 1 10 PRO 10 10 10 PRO PRO C . n C 1 11 PRO 11 11 11 PRO PRO C . n C 1 12 GLY 12 12 12 GLY GLY C . n C 1 13 HYP 13 13 13 HYP HYP C . n C 1 14 HYP 14 14 14 HYP HYP C . n C 1 15 GLY 15 15 15 GLY GLY C . n C 1 16 PRO 16 16 16 PRO PRO C . n C 1 17 PRO 17 17 17 PRO PRO C . n C 1 18 GLY 18 18 18 GLY GLY C . n C 1 19 PRO 19 19 19 PRO PRO C . n C 1 20 PRO 20 20 20 PRO PRO C . n C 1 21 GLY 21 21 21 GLY GLY C . n C 1 22 PRO 22 22 22 PRO PRO C . n C 1 23 PRO 23 23 23 PRO PRO C . n C 1 24 GLY 24 24 24 GLY GLY C . n C 1 25 PRO 25 25 25 PRO PRO C . n C 1 26 PRO 26 26 ? ? ? C . n C 1 27 GLY 27 27 ? ? ? C . n D 1 1 PRO 1 1 ? ? ? D . n D 1 2 PRO 2 2 ? ? ? D . n D 1 3 GLY 3 3 3 GLY GLY D . n D 1 4 PRO 4 4 4 PRO PRO D . n D 1 5 PRO 5 5 5 PRO PRO D . n D 1 6 GLY 6 6 6 GLY GLY D . n D 1 7 PRO 7 7 7 PRO PRO D . n D 1 8 PRO 8 8 8 PRO PRO D . n D 1 9 GLY 9 9 9 GLY GLY D . n D 1 10 PRO 10 10 10 PRO PRO D . n D 1 11 PRO 11 11 11 PRO PRO D . n D 1 12 GLY 12 12 12 GLY GLY D . n D 1 13 HYP 13 13 13 HYP HYP D . n D 1 14 HYP 14 14 14 HYP HYP D . n D 1 15 GLY 15 15 15 GLY GLY D . n D 1 16 PRO 16 16 16 PRO PRO D . n D 1 17 PRO 17 17 17 PRO PRO D . n D 1 18 GLY 18 18 18 GLY GLY D . n D 1 19 PRO 19 19 19 PRO PRO D . n D 1 20 PRO 20 20 20 PRO PRO D . n D 1 21 GLY 21 21 21 GLY GLY D . n D 1 22 PRO 22 22 22 PRO PRO D . n D 1 23 PRO 23 23 23 PRO PRO D . n D 1 24 GLY 24 24 24 GLY GLY D . n D 1 25 PRO 25 25 25 PRO PRO D . n D 1 26 PRO 26 26 26 PRO PRO D . n D 1 27 GLY 27 27 27 GLY GLY D . n E 1 1 PRO 1 1 ? ? ? E . n E 1 2 PRO 2 2 2 PRO PRO E . n E 1 3 GLY 3 3 3 GLY GLY E . n E 1 4 PRO 4 4 4 PRO PRO E . n E 1 5 PRO 5 5 5 PRO PRO E . n E 1 6 GLY 6 6 6 GLY GLY E . n E 1 7 PRO 7 7 7 PRO PRO E . n E 1 8 PRO 8 8 8 PRO PRO E . n E 1 9 GLY 9 9 9 GLY GLY E . n E 1 10 PRO 10 10 10 PRO PRO E . n E 1 11 PRO 11 11 11 PRO PRO E . n E 1 12 GLY 12 12 12 GLY GLY E . n E 1 13 HYP 13 13 13 HYP HYP E . n E 1 14 HYP 14 14 14 HYP HYP E . n E 1 15 GLY 15 15 15 GLY GLY E . n E 1 16 PRO 16 16 16 PRO PRO E . n E 1 17 PRO 17 17 17 PRO PRO E . n E 1 18 GLY 18 18 18 GLY GLY E . n E 1 19 PRO 19 19 19 PRO PRO E . n E 1 20 PRO 20 20 20 PRO PRO E . n E 1 21 GLY 21 21 21 GLY GLY E . n E 1 22 PRO 22 22 22 PRO PRO E . n E 1 23 PRO 23 23 23 PRO PRO E . n E 1 24 GLY 24 24 24 GLY GLY E . n E 1 25 PRO 25 25 25 PRO PRO E . n E 1 26 PRO 26 26 26 PRO PRO E . n E 1 27 GLY 27 27 ? ? ? E . n F 1 1 PRO 1 1 ? ? ? F . n F 1 2 PRO 2 2 ? ? ? F . n F 1 3 GLY 3 3 ? ? ? F . n F 1 4 PRO 4 4 4 PRO PRO F . n F 1 5 PRO 5 5 5 PRO PRO F . n F 1 6 GLY 6 6 6 GLY GLY F . n F 1 7 PRO 7 7 7 PRO PRO F . n F 1 8 PRO 8 8 8 PRO PRO F . n F 1 9 GLY 9 9 9 GLY GLY F . n F 1 10 PRO 10 10 10 PRO PRO F . n F 1 11 PRO 11 11 11 PRO PRO F . n F 1 12 GLY 12 12 12 GLY GLY F . n F 1 13 HYP 13 13 13 HYP HYP F . n F 1 14 HYP 14 14 14 HYP HYP F . n F 1 15 GLY 15 15 15 GLY GLY F . n F 1 16 PRO 16 16 16 PRO PRO F . n F 1 17 PRO 17 17 17 PRO PRO F . n F 1 18 GLY 18 18 18 GLY GLY F . n F 1 19 PRO 19 19 19 PRO PRO F . n F 1 20 PRO 20 20 20 PRO PRO F . n F 1 21 GLY 21 21 21 GLY GLY F . n F 1 22 PRO 22 22 22 PRO PRO F . n F 1 23 PRO 23 23 23 PRO PRO F . n F 1 24 GLY 24 24 24 GLY GLY F . n F 1 25 PRO 25 25 25 PRO PRO F . n F 1 26 PRO 26 26 26 PRO PRO F . n F 1 27 GLY 27 27 27 GLY GLY F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 HOH 1 1001 1001 HOH HOH A . G 2 HOH 2 1002 1002 HOH HOH A . G 2 HOH 3 1003 1003 HOH HOH A . G 2 HOH 4 1004 1004 HOH HOH A . G 2 HOH 5 1005 1005 HOH HOH A . G 2 HOH 6 1006 1006 HOH HOH A . G 2 HOH 7 1007 1007 HOH HOH A . G 2 HOH 8 1008 1008 HOH HOH A . G 2 HOH 9 1009 1009 HOH HOH A . G 2 HOH 10 1010 1010 HOH HOH A . G 2 HOH 11 1011 1011 HOH HOH A . G 2 HOH 12 1012 1012 HOH HOH A . G 2 HOH 13 1013 1013 HOH HOH A . G 2 HOH 14 1014 1014 HOH HOH A . G 2 HOH 15 1015 1015 HOH HOH A . G 2 HOH 16 1016 1016 HOH HOH A . G 2 HOH 17 1017 1017 HOH HOH A . G 2 HOH 18 1018 1018 HOH HOH A . G 2 HOH 19 1019 1019 HOH HOH A . G 2 HOH 20 1020 1020 HOH HOH A . G 2 HOH 21 1021 1021 HOH HOH A . G 2 HOH 22 1022 1022 HOH HOH A . G 2 HOH 23 1023 1023 HOH HOH A . G 2 HOH 24 1024 1024 HOH HOH A . G 2 HOH 25 1025 1025 HOH HOH A . G 2 HOH 26 1026 1026 HOH HOH A . G 2 HOH 27 1143 1143 HOH HOH A . G 2 HOH 28 1154 1154 HOH HOH A . G 2 HOH 29 1157 1157 HOH HOH A . G 2 HOH 30 1168 1168 HOH HOH A . G 2 HOH 31 1175 1175 HOH HOH A . G 2 HOH 32 1186 1186 HOH HOH A . G 2 HOH 33 1201 1201 HOH HOH A . G 2 HOH 34 1202 1202 HOH HOH A . G 2 HOH 35 1207 1207 HOH HOH A . G 2 HOH 36 1210 1210 HOH HOH A . G 2 HOH 37 1225 1225 HOH HOH A . G 2 HOH 38 1227 1227 HOH HOH A . G 2 HOH 39 1228 1228 HOH HOH A . G 2 HOH 40 1229 1229 HOH HOH A . G 2 HOH 41 1230 1230 HOH HOH A . G 2 HOH 42 1234 1234 HOH HOH A . G 2 HOH 43 1236 1236 HOH HOH A . G 2 HOH 44 1239 1239 HOH HOH A . G 2 HOH 45 1242 1242 HOH HOH A . G 2 HOH 46 1246 1246 HOH HOH A . G 2 HOH 47 1249 1249 HOH HOH A . G 2 HOH 48 1254 1254 HOH HOH A . G 2 HOH 49 1259 1259 HOH HOH A . G 2 HOH 50 1260 1260 HOH HOH A . H 2 HOH 1 1027 1027 HOH HOH B . H 2 HOH 2 1028 1028 HOH HOH B . H 2 HOH 3 1029 1029 HOH HOH B . H 2 HOH 4 1030 1030 HOH HOH B . H 2 HOH 5 1031 1031 HOH HOH B . H 2 HOH 6 1032 1032 HOH HOH B . H 2 HOH 7 1033 1033 HOH HOH B . H 2 HOH 8 1034 1034 HOH HOH B . H 2 HOH 9 1035 1035 HOH HOH B . H 2 HOH 10 1036 1036 HOH HOH B . H 2 HOH 11 1037 1037 HOH HOH B . H 2 HOH 12 1038 1038 HOH HOH B . H 2 HOH 13 1039 1039 HOH HOH B . H 2 HOH 14 1040 1040 HOH HOH B . H 2 HOH 15 1041 1041 HOH HOH B . H 2 HOH 16 1042 1042 HOH HOH B . H 2 HOH 17 1043 1043 HOH HOH B . H 2 HOH 18 1044 1044 HOH HOH B . H 2 HOH 19 1045 1045 HOH HOH B . H 2 HOH 20 1046 1046 HOH HOH B . H 2 HOH 21 1047 1047 HOH HOH B . H 2 HOH 22 1048 1048 HOH HOH B . H 2 HOH 23 1049 1049 HOH HOH B . H 2 HOH 24 1050 1050 HOH HOH B . H 2 HOH 25 1145 1145 HOH HOH B . H 2 HOH 26 1146 1146 HOH HOH B . H 2 HOH 27 1148 1148 HOH HOH B . H 2 HOH 28 1153 1153 HOH HOH B . H 2 HOH 29 1156 1156 HOH HOH B . H 2 HOH 30 1159 1159 HOH HOH B . H 2 HOH 31 1164 1164 HOH HOH B . H 2 HOH 32 1171 1171 HOH HOH B . H 2 HOH 33 1172 1172 HOH HOH B . H 2 HOH 34 1173 1173 HOH HOH B . H 2 HOH 35 1182 1182 HOH HOH B . H 2 HOH 36 1191 1191 HOH HOH B . H 2 HOH 37 1194 1194 HOH HOH B . H 2 HOH 38 1197 1197 HOH HOH B . H 2 HOH 39 1204 1204 HOH HOH B . H 2 HOH 40 1206 1206 HOH HOH B . H 2 HOH 41 1218 1218 HOH HOH B . H 2 HOH 42 1232 1232 HOH HOH B . H 2 HOH 43 1235 1235 HOH HOH B . H 2 HOH 44 1262 1262 HOH HOH B . H 2 HOH 45 1263 1263 HOH HOH B . I 2 HOH 1 1051 1051 HOH HOH C . I 2 HOH 2 1052 1052 HOH HOH C . I 2 HOH 3 1053 1053 HOH HOH C . I 2 HOH 4 1054 1054 HOH HOH C . I 2 HOH 5 1055 1055 HOH HOH C . I 2 HOH 6 1056 1056 HOH HOH C . I 2 HOH 7 1057 1057 HOH HOH C . I 2 HOH 8 1058 1058 HOH HOH C . I 2 HOH 9 1059 1059 HOH HOH C . I 2 HOH 10 1060 1060 HOH HOH C . I 2 HOH 11 1061 1061 HOH HOH C . I 2 HOH 12 1062 1062 HOH HOH C . I 2 HOH 13 1063 1063 HOH HOH C . I 2 HOH 14 1064 1064 HOH HOH C . I 2 HOH 15 1065 1065 HOH HOH C . I 2 HOH 16 1066 1066 HOH HOH C . I 2 HOH 17 1067 1067 HOH HOH C . I 2 HOH 18 1068 1068 HOH HOH C . I 2 HOH 19 1069 1069 HOH HOH C . I 2 HOH 20 1070 1070 HOH HOH C . I 2 HOH 21 1144 1144 HOH HOH C . I 2 HOH 22 1161 1161 HOH HOH C . I 2 HOH 23 1170 1170 HOH HOH C . I 2 HOH 24 1185 1185 HOH HOH C . I 2 HOH 25 1187 1187 HOH HOH C . I 2 HOH 26 1211 1211 HOH HOH C . I 2 HOH 27 1212 1212 HOH HOH C . I 2 HOH 28 1215 1215 HOH HOH C . I 2 HOH 29 1220 1220 HOH HOH C . I 2 HOH 30 1247 1247 HOH HOH C . I 2 HOH 31 1251 1251 HOH HOH C . I 2 HOH 32 1252 1252 HOH HOH C . I 2 HOH 33 1257 1257 HOH HOH C . I 2 HOH 34 1261 1261 HOH HOH C . J 2 HOH 1 1071 1071 HOH HOH D . J 2 HOH 2 1072 1072 HOH HOH D . J 2 HOH 3 1073 1073 HOH HOH D . J 2 HOH 4 1074 1074 HOH HOH D . J 2 HOH 5 1075 1075 HOH HOH D . J 2 HOH 6 1076 1076 HOH HOH D . J 2 HOH 7 1077 1077 HOH HOH D . J 2 HOH 8 1078 1078 HOH HOH D . J 2 HOH 9 1079 1079 HOH HOH D . J 2 HOH 10 1080 1080 HOH HOH D . J 2 HOH 11 1081 1081 HOH HOH D . J 2 HOH 12 1082 1082 HOH HOH D . J 2 HOH 13 1083 1083 HOH HOH D . J 2 HOH 14 1084 1084 HOH HOH D . J 2 HOH 15 1085 1085 HOH HOH D . J 2 HOH 16 1086 1086 HOH HOH D . J 2 HOH 17 1087 1087 HOH HOH D . J 2 HOH 18 1088 1088 HOH HOH D . J 2 HOH 19 1089 1089 HOH HOH D . J 2 HOH 20 1090 1090 HOH HOH D . J 2 HOH 21 1091 1091 HOH HOH D . J 2 HOH 22 1092 1092 HOH HOH D . J 2 HOH 23 1093 1093 HOH HOH D . J 2 HOH 24 1149 1149 HOH HOH D . J 2 HOH 25 1162 1162 HOH HOH D . J 2 HOH 26 1165 1165 HOH HOH D . J 2 HOH 27 1166 1166 HOH HOH D . J 2 HOH 28 1177 1177 HOH HOH D . J 2 HOH 29 1179 1179 HOH HOH D . J 2 HOH 30 1181 1181 HOH HOH D . J 2 HOH 31 1198 1198 HOH HOH D . J 2 HOH 32 1200 1200 HOH HOH D . J 2 HOH 33 1208 1208 HOH HOH D . J 2 HOH 34 1216 1216 HOH HOH D . J 2 HOH 35 1237 1237 HOH HOH D . J 2 HOH 36 1238 1238 HOH HOH D . J 2 HOH 37 1240 1240 HOH HOH D . J 2 HOH 38 1255 1255 HOH HOH D . K 2 HOH 1 1094 1094 HOH HOH E . K 2 HOH 2 1095 1095 HOH HOH E . K 2 HOH 3 1096 1096 HOH HOH E . K 2 HOH 4 1097 1097 HOH HOH E . K 2 HOH 5 1098 1098 HOH HOH E . K 2 HOH 6 1099 1099 HOH HOH E . K 2 HOH 7 1100 1100 HOH HOH E . K 2 HOH 8 1101 1101 HOH HOH E . K 2 HOH 9 1102 1102 HOH HOH E . K 2 HOH 10 1103 1103 HOH HOH E . K 2 HOH 11 1104 1104 HOH HOH E . K 2 HOH 12 1105 1105 HOH HOH E . K 2 HOH 13 1106 1106 HOH HOH E . K 2 HOH 14 1107 1107 HOH HOH E . K 2 HOH 15 1108 1108 HOH HOH E . K 2 HOH 16 1109 1109 HOH HOH E . K 2 HOH 17 1110 1110 HOH HOH E . K 2 HOH 18 1111 1111 HOH HOH E . K 2 HOH 19 1112 1112 HOH HOH E . K 2 HOH 20 1113 1113 HOH HOH E . K 2 HOH 21 1114 1114 HOH HOH E . K 2 HOH 22 1115 1115 HOH HOH E . K 2 HOH 23 1116 1116 HOH HOH E . K 2 HOH 24 1117 1117 HOH HOH E . K 2 HOH 25 1118 1118 HOH HOH E . K 2 HOH 26 1151 1151 HOH HOH E . K 2 HOH 27 1158 1158 HOH HOH E . K 2 HOH 28 1174 1174 HOH HOH E . K 2 HOH 29 1180 1180 HOH HOH E . K 2 HOH 30 1184 1184 HOH HOH E . K 2 HOH 31 1188 1188 HOH HOH E . K 2 HOH 32 1189 1189 HOH HOH E . K 2 HOH 33 1190 1190 HOH HOH E . K 2 HOH 34 1192 1192 HOH HOH E . K 2 HOH 35 1196 1196 HOH HOH E . K 2 HOH 36 1205 1205 HOH HOH E . K 2 HOH 37 1209 1209 HOH HOH E . K 2 HOH 38 1213 1213 HOH HOH E . K 2 HOH 39 1214 1214 HOH HOH E . K 2 HOH 40 1219 1219 HOH HOH E . K 2 HOH 41 1233 1233 HOH HOH E . K 2 HOH 42 1243 1243 HOH HOH E . K 2 HOH 43 1244 1244 HOH HOH E . K 2 HOH 44 1245 1245 HOH HOH E . K 2 HOH 45 1248 1248 HOH HOH E . K 2 HOH 46 1253 1253 HOH HOH E . K 2 HOH 47 1256 1256 HOH HOH E . K 2 HOH 48 1258 1258 HOH HOH E . L 2 HOH 1 1119 1119 HOH HOH F . L 2 HOH 2 1120 1120 HOH HOH F . L 2 HOH 3 1121 1121 HOH HOH F . L 2 HOH 4 1122 1122 HOH HOH F . L 2 HOH 5 1123 1123 HOH HOH F . L 2 HOH 6 1124 1124 HOH HOH F . L 2 HOH 7 1125 1125 HOH HOH F . L 2 HOH 8 1126 1126 HOH HOH F . L 2 HOH 9 1127 1127 HOH HOH F . L 2 HOH 10 1128 1128 HOH HOH F . L 2 HOH 11 1129 1129 HOH HOH F . L 2 HOH 12 1130 1130 HOH HOH F . L 2 HOH 13 1131 1131 HOH HOH F . L 2 HOH 14 1132 1132 HOH HOH F . L 2 HOH 15 1133 1133 HOH HOH F . L 2 HOH 16 1134 1134 HOH HOH F . L 2 HOH 17 1135 1135 HOH HOH F . L 2 HOH 18 1136 1136 HOH HOH F . L 2 HOH 19 1137 1137 HOH HOH F . L 2 HOH 20 1138 1138 HOH HOH F . L 2 HOH 21 1139 1139 HOH HOH F . L 2 HOH 22 1140 1140 HOH HOH F . L 2 HOH 23 1141 1141 HOH HOH F . L 2 HOH 24 1142 1142 HOH HOH F . L 2 HOH 25 1147 1147 HOH HOH F . L 2 HOH 26 1150 1150 HOH HOH F . L 2 HOH 27 1152 1152 HOH HOH F . L 2 HOH 28 1155 1155 HOH HOH F . L 2 HOH 29 1160 1160 HOH HOH F . L 2 HOH 30 1163 1163 HOH HOH F . L 2 HOH 31 1167 1167 HOH HOH F . L 2 HOH 32 1169 1169 HOH HOH F . L 2 HOH 33 1176 1176 HOH HOH F . L 2 HOH 34 1178 1178 HOH HOH F . L 2 HOH 35 1183 1183 HOH HOH F . L 2 HOH 36 1193 1193 HOH HOH F . L 2 HOH 37 1195 1195 HOH HOH F . L 2 HOH 38 1199 1199 HOH HOH F . L 2 HOH 39 1203 1203 HOH HOH F . L 2 HOH 40 1217 1217 HOH HOH F . L 2 HOH 41 1221 1221 HOH HOH F . L 2 HOH 42 1222 1222 HOH HOH F . L 2 HOH 43 1223 1223 HOH HOH F . L 2 HOH 44 1224 1224 HOH HOH F . L 2 HOH 45 1226 1226 HOH HOH F . L 2 HOH 46 1231 1231 HOH HOH F . L 2 HOH 47 1241 1241 HOH HOH F . L 2 HOH 48 1250 1250 HOH HOH F . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A HYP 13 A HYP 13 ? PRO 4-HYDROXYPROLINE 2 A HYP 14 A HYP 14 ? PRO 4-HYDROXYPROLINE 3 B HYP 13 B HYP 13 ? PRO 4-HYDROXYPROLINE 4 B HYP 14 B HYP 14 ? PRO 4-HYDROXYPROLINE 5 C HYP 13 C HYP 13 ? PRO 4-HYDROXYPROLINE 6 C HYP 14 C HYP 14 ? PRO 4-HYDROXYPROLINE 7 D HYP 13 D HYP 13 ? PRO 4-HYDROXYPROLINE 8 D HYP 14 D HYP 14 ? PRO 4-HYDROXYPROLINE 9 E HYP 13 E HYP 13 ? PRO 4-HYDROXYPROLINE 10 E HYP 14 E HYP 14 ? PRO 4-HYDROXYPROLINE 11 F HYP 13 F HYP 13 ? PRO 4-HYDROXYPROLINE 12 F HYP 14 F HYP 14 ? PRO 4-HYDROXYPROLINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA trimeric 3 2 author_and_software_defined_assembly PISA trimeric 3 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,G,H,I 2 1 D,E,F,J,K,L # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4110 ? 1 MORE -26 ? 1 'SSA (A^2)' 3950 ? 2 'ABSA (A^2)' 4230 ? 2 MORE -26 ? 2 'SSA (A^2)' 3890 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-09-19 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CrystalClear 'data collection' . ? 1 CrystalClear 'data reduction' . ? 2 X-PLOR 'model building' . ? 3 SHELXL-97 refinement . ? 4 HKL-2000 'data reduction' . ? 5 CrystalClear 'data scaling' . ? 6 X-PLOR phasing . ? 7 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id PRO _pdbx_validate_torsion.auth_asym_id C _pdbx_validate_torsion.auth_seq_id 2 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -49.54 _pdbx_validate_torsion.psi 158.30 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A PRO 25 ? A PRO 25 2 1 Y 1 A PRO 26 ? A PRO 26 3 1 Y 1 A GLY 27 ? A GLY 27 4 1 Y 1 B PRO 25 ? B PRO 25 5 1 Y 1 B PRO 26 ? B PRO 26 6 1 Y 1 B GLY 27 ? B GLY 27 7 1 Y 1 C PRO 26 ? C PRO 26 8 1 Y 1 C GLY 27 ? C GLY 27 9 1 Y 1 D PRO 1 ? D PRO 1 10 1 Y 1 D PRO 2 ? D PRO 2 11 1 Y 1 E PRO 1 ? E PRO 1 12 1 Y 1 E GLY 27 ? E GLY 27 13 1 Y 1 F PRO 1 ? F PRO 1 14 1 Y 1 F PRO 2 ? F PRO 2 15 1 Y 1 F GLY 3 ? F GLY 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal GLY N N N N 1 GLY CA C N N 2 GLY C C N N 3 GLY O O N N 4 GLY OXT O N N 5 GLY H H N N 6 GLY H2 H N N 7 GLY HA2 H N N 8 GLY HA3 H N N 9 GLY HXT H N N 10 HOH O O N N 11 HOH H1 H N N 12 HOH H2 H N N 13 HYP N N N N 14 HYP CA C N S 15 HYP C C N N 16 HYP O O N N 17 HYP CB C N N 18 HYP CG C N R 19 HYP CD C N N 20 HYP OD1 O N N 21 HYP OXT O N N 22 HYP H H N N 23 HYP HA H N N 24 HYP HB2 H N N 25 HYP HB3 H N N 26 HYP HG H N N 27 HYP HD22 H N N 28 HYP HD23 H N N 29 HYP HD1 H N N 30 HYP HXT H N N 31 PRO N N N N 32 PRO CA C N S 33 PRO C C N N 34 PRO O O N N 35 PRO CB C N N 36 PRO CG C N N 37 PRO CD C N N 38 PRO OXT O N N 39 PRO H H N N 40 PRO HA H N N 41 PRO HB2 H N N 42 PRO HB3 H N N 43 PRO HG2 H N N 44 PRO HG3 H N N 45 PRO HD2 H N N 46 PRO HD3 H N N 47 PRO HXT H N N 48 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GLY N CA sing N N 1 GLY N H sing N N 2 GLY N H2 sing N N 3 GLY CA C sing N N 4 GLY CA HA2 sing N N 5 GLY CA HA3 sing N N 6 GLY C O doub N N 7 GLY C OXT sing N N 8 GLY OXT HXT sing N N 9 HOH O H1 sing N N 10 HOH O H2 sing N N 11 HYP N CA sing N N 12 HYP N CD sing N N 13 HYP N H sing N N 14 HYP CA C sing N N 15 HYP CA CB sing N N 16 HYP CA HA sing N N 17 HYP C O doub N N 18 HYP C OXT sing N N 19 HYP CB CG sing N N 20 HYP CB HB2 sing N N 21 HYP CB HB3 sing N N 22 HYP CG CD sing N N 23 HYP CG OD1 sing N N 24 HYP CG HG sing N N 25 HYP CD HD22 sing N N 26 HYP CD HD23 sing N N 27 HYP OD1 HD1 sing N N 28 HYP OXT HXT sing N N 29 PRO N CA sing N N 30 PRO N CD sing N N 31 PRO N H sing N N 32 PRO CA C sing N N 33 PRO CA CB sing N N 34 PRO CA HA sing N N 35 PRO C O doub N N 36 PRO C OXT sing N N 37 PRO CB CG sing N N 38 PRO CB HB2 sing N N 39 PRO CB HB3 sing N N 40 PRO CG CD sing N N 41 PRO CG HG2 sing N N 42 PRO CG HG3 sing N N 43 PRO CD HD2 sing N N 44 PRO CD HD3 sing N N 45 PRO OXT HXT sing N N 46 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2CUO _pdbx_initial_refinement_model.details 'PDB 2CUO' #