data_2D7N # _entry.id 2D7N # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2D7N pdb_00002d7n 10.2210/pdb2d7n/pdb RCSB RCSB025088 ? ? WWPDB D_1000025088 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsk003000177.3 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2D7N _pdbx_database_status.recvd_initial_deposition_date 2005-11-24 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tomizawa, T.' 1 'Kigawa, T.' 2 'Koshiba, S.' 3 'Inoue, M.' 4 'Yokoyama, S.' 5 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 6 # _citation.id primary _citation.title 'Solution structure of the 16th Filamin domain from human Filamin C' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tomizawa, T.' 1 ? primary 'Kigawa, T.' 2 ? primary 'Koshiba, S.' 3 ? primary 'Inoue, M.' 4 ? primary 'Yokoyama, S.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description Filamin-C _entity.formula_weight 9881.043 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'Filamin domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Gamma-filamin, Filamin-2, Protein FLNc, Actin-binding-like protein, ABP-L, ABP-280-like protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGLRPFNLVIPFAVQKGELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQFYV DAINSRHSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGLRPFNLVIPFAVQKGELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQFYV DAINSRHSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsk003000177.3 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 LEU n 1 9 ARG n 1 10 PRO n 1 11 PHE n 1 12 ASN n 1 13 LEU n 1 14 VAL n 1 15 ILE n 1 16 PRO n 1 17 PHE n 1 18 ALA n 1 19 VAL n 1 20 GLN n 1 21 LYS n 1 22 GLY n 1 23 GLU n 1 24 LEU n 1 25 THR n 1 26 GLY n 1 27 GLU n 1 28 VAL n 1 29 ARG n 1 30 MET n 1 31 PRO n 1 32 SER n 1 33 GLY n 1 34 LYS n 1 35 THR n 1 36 ALA n 1 37 ARG n 1 38 PRO n 1 39 ASN n 1 40 ILE n 1 41 THR n 1 42 ASP n 1 43 ASN n 1 44 LYS n 1 45 ASP n 1 46 GLY n 1 47 THR n 1 48 ILE n 1 49 THR n 1 50 VAL n 1 51 ARG n 1 52 TYR n 1 53 ALA n 1 54 PRO n 1 55 THR n 1 56 GLU n 1 57 LYS n 1 58 GLY n 1 59 LEU n 1 60 HIS n 1 61 GLN n 1 62 MET n 1 63 GLY n 1 64 ILE n 1 65 LYS n 1 66 TYR n 1 67 ASP n 1 68 GLY n 1 69 ASN n 1 70 HIS n 1 71 ILE n 1 72 PRO n 1 73 GLY n 1 74 SER n 1 75 PRO n 1 76 LEU n 1 77 GLN n 1 78 PHE n 1 79 TYR n 1 80 VAL n 1 81 ASP n 1 82 ALA n 1 83 ILE n 1 84 ASN n 1 85 SER n 1 86 ARG n 1 87 HIS n 1 88 SER n 1 89 GLY n 1 90 PRO n 1 91 SER n 1 92 SER n 1 93 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene FLNC _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P050404-02 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code FLNC_HUMAN _struct_ref.pdbx_db_accession Q14315 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LRPFNLVIPFAVQKGELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQFYVDAINSRH ; _struct_ref.pdbx_align_begin 1782 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2D7N _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 87 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q14315 _struct_ref_seq.db_align_beg 1782 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1861 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 87 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2D7N GLY A 1 ? UNP Q14315 ? ? 'cloning artifact' 1 1 1 2D7N SER A 2 ? UNP Q14315 ? ? 'cloning artifact' 2 2 1 2D7N SER A 3 ? UNP Q14315 ? ? 'cloning artifact' 3 3 1 2D7N GLY A 4 ? UNP Q14315 ? ? 'cloning artifact' 4 4 1 2D7N SER A 5 ? UNP Q14315 ? ? 'cloning artifact' 5 5 1 2D7N SER A 6 ? UNP Q14315 ? ? 'cloning artifact' 6 6 1 2D7N GLY A 7 ? UNP Q14315 ? ? 'cloning artifact' 7 7 1 2D7N SER A 88 ? UNP Q14315 ? ? 'cloning artifact' 88 8 1 2D7N GLY A 89 ? UNP Q14315 ? ? 'cloning artifact' 89 9 1 2D7N PRO A 90 ? UNP Q14315 ? ? 'cloning artifact' 90 10 1 2D7N SER A 91 ? UNP Q14315 ? ? 'cloning artifact' 91 11 1 2D7N SER A 92 ? UNP Q14315 ? ? 'cloning artifact' 92 12 1 2D7N GLY A 93 ? UNP Q14315 ? ? 'cloning artifact' 93 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 296 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.19mM Filamin domain U-15N,13C; 20mM d-Tris-HCl(pH 7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2D7N _pdbx_nmr_refine.method 'torsion angle dynamics, restrainted molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2D7N _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function,structures with the lowest energy,structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2D7N _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20030801 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.932 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 2D7N _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2D7N _struct.title 'Solution structure of the 16th Filamin domain from human Filamin C' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2D7N _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN' _struct_keywords.text ;beta-sandwich, immunoglobulin-like fold, filamin domain, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, STRUCTURAL PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 74 A . ? SER 74 A PRO 75 A ? PRO 75 A 1 0.00 2 SER 74 A . ? SER 74 A PRO 75 A ? PRO 75 A 2 -0.04 3 SER 74 A . ? SER 74 A PRO 75 A ? PRO 75 A 3 -0.06 4 SER 74 A . ? SER 74 A PRO 75 A ? PRO 75 A 4 -0.02 5 SER 74 A . ? SER 74 A PRO 75 A ? PRO 75 A 5 0.01 6 SER 74 A . ? SER 74 A PRO 75 A ? PRO 75 A 6 0.02 7 SER 74 A . ? SER 74 A PRO 75 A ? PRO 75 A 7 0.03 8 SER 74 A . ? SER 74 A PRO 75 A ? PRO 75 A 8 -0.04 9 SER 74 A . ? SER 74 A PRO 75 A ? PRO 75 A 9 0.01 10 SER 74 A . ? SER 74 A PRO 75 A ? PRO 75 A 10 0.04 11 SER 74 A . ? SER 74 A PRO 75 A ? PRO 75 A 11 0.00 12 SER 74 A . ? SER 74 A PRO 75 A ? PRO 75 A 12 0.04 13 SER 74 A . ? SER 74 A PRO 75 A ? PRO 75 A 13 0.01 14 SER 74 A . ? SER 74 A PRO 75 A ? PRO 75 A 14 0.02 15 SER 74 A . ? SER 74 A PRO 75 A ? PRO 75 A 15 0.01 16 SER 74 A . ? SER 74 A PRO 75 A ? PRO 75 A 16 0.02 17 SER 74 A . ? SER 74 A PRO 75 A ? PRO 75 A 17 -0.09 18 SER 74 A . ? SER 74 A PRO 75 A ? PRO 75 A 18 -0.03 19 SER 74 A . ? SER 74 A PRO 75 A ? PRO 75 A 19 -0.07 20 SER 74 A . ? SER 74 A PRO 75 A ? PRO 75 A 20 -0.06 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 11 ? ILE A 15 ? PHE A 11 ILE A 15 A 2 ILE A 48 ? TYR A 52 ? ILE A 48 TYR A 52 A 3 ASN A 39 ? ASP A 42 ? ASN A 39 ASP A 42 B 1 THR A 35 ? ALA A 36 ? THR A 35 ALA A 36 B 2 LEU A 24 ? ARG A 29 ? LEU A 24 ARG A 29 B 3 GLY A 58 ? TYR A 66 ? GLY A 58 TYR A 66 B 4 LEU A 76 ? VAL A 80 ? LEU A 76 VAL A 80 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 13 ? N LEU A 13 O VAL A 50 ? O VAL A 50 A 2 3 O ARG A 51 ? O ARG A 51 N ASN A 39 ? N ASN A 39 B 1 2 O ALA A 36 ? O ALA A 36 N VAL A 28 ? N VAL A 28 B 2 3 N THR A 25 ? N THR A 25 O LYS A 65 ? O LYS A 65 B 3 4 N MET A 62 ? N MET A 62 O LEU A 76 ? O LEU A 76 # _database_PDB_matrix.entry_id 2D7N _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2D7N _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 ARG 9 9 9 ARG ARG A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 PHE 11 11 11 PHE PHE A . n A 1 12 ASN 12 12 12 ASN ASN A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 PRO 16 16 16 PRO PRO A . n A 1 17 PHE 17 17 17 PHE PHE A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 VAL 19 19 19 VAL VAL A . n A 1 20 GLN 20 20 20 GLN GLN A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 GLU 23 23 23 GLU GLU A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 THR 25 25 25 THR THR A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 GLU 27 27 27 GLU GLU A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 ARG 29 29 29 ARG ARG A . n A 1 30 MET 30 30 30 MET MET A . n A 1 31 PRO 31 31 31 PRO PRO A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 LYS 34 34 34 LYS LYS A . n A 1 35 THR 35 35 35 THR THR A . n A 1 36 ALA 36 36 36 ALA ALA A . n A 1 37 ARG 37 37 37 ARG ARG A . n A 1 38 PRO 38 38 38 PRO PRO A . n A 1 39 ASN 39 39 39 ASN ASN A . n A 1 40 ILE 40 40 40 ILE ILE A . n A 1 41 THR 41 41 41 THR THR A . n A 1 42 ASP 42 42 42 ASP ASP A . n A 1 43 ASN 43 43 43 ASN ASN A . n A 1 44 LYS 44 44 44 LYS LYS A . n A 1 45 ASP 45 45 45 ASP ASP A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 ILE 48 48 48 ILE ILE A . n A 1 49 THR 49 49 49 THR THR A . n A 1 50 VAL 50 50 50 VAL VAL A . n A 1 51 ARG 51 51 51 ARG ARG A . n A 1 52 TYR 52 52 52 TYR TYR A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 PRO 54 54 54 PRO PRO A . n A 1 55 THR 55 55 55 THR THR A . n A 1 56 GLU 56 56 56 GLU GLU A . n A 1 57 LYS 57 57 57 LYS LYS A . n A 1 58 GLY 58 58 58 GLY GLY A . n A 1 59 LEU 59 59 59 LEU LEU A . n A 1 60 HIS 60 60 60 HIS HIS A . n A 1 61 GLN 61 61 61 GLN GLN A . n A 1 62 MET 62 62 62 MET MET A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 ILE 64 64 64 ILE ILE A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 TYR 66 66 66 TYR TYR A . n A 1 67 ASP 67 67 67 ASP ASP A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 ASN 69 69 69 ASN ASN A . n A 1 70 HIS 70 70 70 HIS HIS A . n A 1 71 ILE 71 71 71 ILE ILE A . n A 1 72 PRO 72 72 72 PRO PRO A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 SER 74 74 74 SER SER A . n A 1 75 PRO 75 75 75 PRO PRO A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 GLN 77 77 77 GLN GLN A . n A 1 78 PHE 78 78 78 PHE PHE A . n A 1 79 TYR 79 79 79 TYR TYR A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 ASP 81 81 81 ASP ASP A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 ILE 83 83 83 ILE ILE A . n A 1 84 ASN 84 84 84 ASN ASN A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 ARG 86 86 86 ARG ARG A . n A 1 87 HIS 87 87 87 HIS HIS A . n A 1 88 SER 88 88 88 SER SER A . n A 1 89 GLY 89 89 89 GLY GLY A . n A 1 90 PRO 90 90 90 PRO PRO A . n A 1 91 SER 91 91 91 SER SER A . n A 1 92 SER 92 92 92 SER SER A . n A 1 93 GLY 93 93 93 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-05-24 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 16 ? ? -69.75 82.68 2 1 GLN A 20 ? ? -127.66 -66.98 3 1 LYS A 21 ? ? -102.05 47.61 4 1 PRO A 38 ? ? -69.70 -163.87 5 1 ASP A 67 ? ? 49.66 25.67 6 1 HIS A 70 ? ? -59.23 103.56 7 1 ILE A 71 ? ? -46.80 153.10 8 1 PRO A 72 ? ? -69.73 82.31 9 1 PRO A 75 ? ? -69.72 -178.39 10 1 HIS A 87 ? ? -174.57 130.88 11 2 PRO A 16 ? ? -69.71 87.16 12 2 LYS A 21 ? ? 34.26 39.24 13 2 PRO A 38 ? ? -69.75 -163.70 14 2 HIS A 70 ? ? -58.95 98.22 15 2 ILE A 71 ? ? -42.70 152.18 16 2 PRO A 72 ? ? -69.79 88.64 17 3 PRO A 16 ? ? -69.83 83.94 18 3 GLN A 20 ? ? -111.73 -71.64 19 3 PRO A 38 ? ? -69.78 -163.74 20 3 ASP A 67 ? ? 49.02 27.79 21 3 HIS A 70 ? ? -59.04 99.68 22 3 ILE A 71 ? ? -40.39 153.14 23 3 PRO A 72 ? ? -69.70 82.94 24 3 PRO A 75 ? ? -69.73 -179.28 25 3 HIS A 87 ? ? -52.66 102.09 26 3 PRO A 90 ? ? -69.76 2.84 27 4 PRO A 16 ? ? -69.81 83.16 28 4 PRO A 38 ? ? -69.75 -163.94 29 4 HIS A 70 ? ? -52.17 100.39 30 4 ILE A 71 ? ? -44.98 152.23 31 4 PRO A 72 ? ? -69.75 88.31 32 4 PRO A 75 ? ? -69.76 -178.63 33 4 SER A 85 ? ? -134.01 -42.24 34 4 ARG A 86 ? ? -58.20 81.22 35 4 HIS A 87 ? ? -35.11 118.03 36 5 PRO A 16 ? ? -69.79 82.63 37 5 GLN A 20 ? ? -117.55 -71.29 38 5 PRO A 38 ? ? -69.83 -163.71 39 5 HIS A 70 ? ? -55.47 101.42 40 5 ILE A 71 ? ? -45.36 152.05 41 5 PRO A 72 ? ? -69.81 90.68 42 6 PRO A 16 ? ? -69.77 81.07 43 6 LYS A 21 ? ? 37.51 40.91 44 6 PRO A 38 ? ? -69.85 -163.68 45 6 HIS A 70 ? ? -55.56 100.98 46 6 ILE A 71 ? ? -45.64 152.74 47 6 PRO A 72 ? ? -69.79 94.81 48 6 ARG A 86 ? ? -121.28 -60.76 49 7 SER A 2 ? ? -36.58 117.19 50 7 PRO A 16 ? ? -69.69 80.06 51 7 LYS A 21 ? ? 36.16 40.41 52 7 PRO A 38 ? ? -69.81 -163.73 53 7 HIS A 70 ? ? -55.39 100.86 54 7 ILE A 71 ? ? -44.97 152.21 55 7 PRO A 72 ? ? -69.74 90.02 56 8 PRO A 16 ? ? -69.73 80.02 57 8 LYS A 21 ? ? 37.07 40.28 58 8 PRO A 38 ? ? -69.78 -163.71 59 8 HIS A 70 ? ? -56.35 97.57 60 8 ILE A 71 ? ? -41.04 152.26 61 8 PRO A 72 ? ? -69.71 91.15 62 8 ASN A 84 ? ? -104.91 47.50 63 9 PRO A 16 ? ? -69.73 80.83 64 9 GLN A 20 ? ? -100.59 -74.97 65 9 PRO A 38 ? ? -69.76 -163.80 66 9 ILE A 71 ? ? -49.46 152.83 67 9 PRO A 72 ? ? -69.72 88.17 68 10 SER A 3 ? ? 38.11 40.33 69 10 PRO A 16 ? ? -69.75 83.36 70 10 GLN A 20 ? ? -109.31 -72.59 71 10 PRO A 38 ? ? -69.78 -163.65 72 10 HIS A 70 ? ? -58.44 100.95 73 10 ILE A 71 ? ? -44.44 152.26 74 10 PRO A 72 ? ? -69.72 90.84 75 10 PRO A 90 ? ? -69.68 89.47 76 11 SER A 5 ? ? -48.79 107.26 77 11 PRO A 16 ? ? -69.73 87.52 78 11 GLN A 20 ? ? -96.76 -72.58 79 11 PRO A 38 ? ? -69.73 -163.79 80 11 HIS A 70 ? ? -55.69 97.81 81 11 ILE A 71 ? ? -41.68 152.27 82 11 PRO A 72 ? ? -69.70 88.96 83 11 ALA A 82 ? ? -41.49 160.30 84 11 ARG A 86 ? ? -36.16 109.48 85 11 PRO A 90 ? ? -69.67 2.53 86 11 SER A 91 ? ? -35.25 131.77 87 12 PRO A 16 ? ? -69.79 85.01 88 12 PRO A 38 ? ? -69.73 -165.25 89 12 HIS A 70 ? ? -52.79 102.66 90 12 ILE A 71 ? ? -48.64 152.73 91 12 PRO A 72 ? ? -69.74 89.43 92 12 PRO A 90 ? ? -69.72 89.19 93 13 PRO A 16 ? ? -69.68 82.24 94 13 LYS A 21 ? ? 36.66 43.60 95 13 PRO A 38 ? ? -69.76 -163.88 96 13 HIS A 70 ? ? -49.05 101.61 97 13 ILE A 71 ? ? -46.53 152.32 98 13 PRO A 72 ? ? -69.69 92.87 99 13 SER A 85 ? ? -36.09 137.57 100 13 SER A 92 ? ? -36.64 98.87 101 14 PRO A 16 ? ? -69.75 80.15 102 14 LYS A 21 ? ? 39.09 39.84 103 14 PRO A 38 ? ? -69.78 -164.22 104 14 HIS A 70 ? ? -47.64 106.85 105 14 ILE A 71 ? ? -49.68 153.36 106 14 PRO A 72 ? ? -69.75 90.23 107 15 PRO A 16 ? ? -69.73 80.64 108 15 PRO A 38 ? ? -69.78 -163.91 109 15 ASP A 67 ? ? 45.06 29.40 110 15 ILE A 71 ? ? -44.08 152.46 111 15 PRO A 72 ? ? -69.80 87.55 112 15 ALA A 82 ? ? -38.86 148.59 113 15 HIS A 87 ? ? 39.54 40.32 114 16 PRO A 16 ? ? -69.75 81.02 115 16 PRO A 38 ? ? -69.81 -166.04 116 16 HIS A 70 ? ? -57.97 98.76 117 16 ILE A 71 ? ? -43.24 152.40 118 16 PRO A 72 ? ? -69.76 89.89 119 16 PRO A 75 ? ? -69.79 -177.21 120 16 ILE A 83 ? ? -40.16 97.71 121 16 SER A 92 ? ? -67.80 84.59 122 17 PRO A 16 ? ? -69.74 85.51 123 17 PRO A 38 ? ? -69.76 -164.51 124 17 ILE A 71 ? ? -43.99 152.45 125 17 PRO A 72 ? ? -69.76 92.07 126 17 SER A 92 ? ? -61.46 99.35 127 18 PRO A 16 ? ? -69.78 81.67 128 18 GLN A 20 ? ? -85.24 -71.78 129 18 PRO A 38 ? ? -69.73 -163.73 130 18 HIS A 70 ? ? -56.57 95.57 131 18 ILE A 71 ? ? -40.48 152.33 132 18 PRO A 72 ? ? -69.76 93.63 133 18 ASN A 84 ? ? -89.64 42.85 134 19 PRO A 16 ? ? -69.72 81.24 135 19 GLN A 20 ? ? -121.51 -71.51 136 19 LYS A 21 ? ? -109.34 59.14 137 19 PRO A 38 ? ? -69.77 -163.80 138 19 HIS A 70 ? ? -52.56 101.09 139 19 ILE A 71 ? ? -45.81 152.42 140 19 PRO A 72 ? ? -69.75 87.46 141 19 HIS A 87 ? ? -64.21 94.67 142 19 PRO A 90 ? ? -69.73 2.59 143 20 PRO A 16 ? ? -69.79 82.43 144 20 GLN A 20 ? ? -119.34 -70.02 145 20 PRO A 38 ? ? -69.76 -163.75 146 20 HIS A 70 ? ? -57.96 97.64 147 20 ILE A 71 ? ? -41.02 153.54 148 20 PRO A 72 ? ? -69.77 82.49 149 20 PRO A 75 ? ? -69.76 -178.64 150 20 ILE A 83 ? ? -57.94 91.38 151 20 HIS A 87 ? ? -82.09 40.09 152 20 SER A 88 ? ? -55.38 88.38 #