data_2D7P # _entry.id 2D7P # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2D7P pdb_00002d7p 10.2210/pdb2d7p/pdb RCSB RCSB025090 ? ? WWPDB D_1000025090 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsk003000177.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2D7P _pdbx_database_status.recvd_initial_deposition_date 2005-11-24 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tomizawa, T.' 1 'Kigawa, T.' 2 'Koshiba, S.' 3 'Inoue, M.' 4 'Yokoyama, S.' 5 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 6 # _citation.id primary _citation.title 'Solution structure of the 22th Filamin domain from human Filamin C' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tomizawa, T.' 1 ? primary 'Kigawa, T.' 2 ? primary 'Koshiba, S.' 3 ? primary 'Inoue, M.' 4 ? primary 'Yokoyama, S.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description Filamin-C _entity.formula_weight 11670.751 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'Filamin domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Gamma-filamin, Filamin-2, Protein FLNc, Actin-binding-like protein, ABP-L, ABP-280-like protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGSDDARRLTVTSLQETGLKVNQPASFAVQLNGARGVIDARVHTPSGAVEECYVSELDSDKHTIRFIPHENGVHS IDVKFNGAHIPGSPFKIRVGEQSQAGSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGSDDARRLTVTSLQETGLKVNQPASFAVQLNGARGVIDARVHTPSGAVEECYVSELDSDKHTIRFIPHENGVHS IDVKFNGAHIPGSPFKIRVGEQSQAGSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsk003000177.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 SER n 1 9 ASP n 1 10 ASP n 1 11 ALA n 1 12 ARG n 1 13 ARG n 1 14 LEU n 1 15 THR n 1 16 VAL n 1 17 THR n 1 18 SER n 1 19 LEU n 1 20 GLN n 1 21 GLU n 1 22 THR n 1 23 GLY n 1 24 LEU n 1 25 LYS n 1 26 VAL n 1 27 ASN n 1 28 GLN n 1 29 PRO n 1 30 ALA n 1 31 SER n 1 32 PHE n 1 33 ALA n 1 34 VAL n 1 35 GLN n 1 36 LEU n 1 37 ASN n 1 38 GLY n 1 39 ALA n 1 40 ARG n 1 41 GLY n 1 42 VAL n 1 43 ILE n 1 44 ASP n 1 45 ALA n 1 46 ARG n 1 47 VAL n 1 48 HIS n 1 49 THR n 1 50 PRO n 1 51 SER n 1 52 GLY n 1 53 ALA n 1 54 VAL n 1 55 GLU n 1 56 GLU n 1 57 CYS n 1 58 TYR n 1 59 VAL n 1 60 SER n 1 61 GLU n 1 62 LEU n 1 63 ASP n 1 64 SER n 1 65 ASP n 1 66 LYS n 1 67 HIS n 1 68 THR n 1 69 ILE n 1 70 ARG n 1 71 PHE n 1 72 ILE n 1 73 PRO n 1 74 HIS n 1 75 GLU n 1 76 ASN n 1 77 GLY n 1 78 VAL n 1 79 HIS n 1 80 SER n 1 81 ILE n 1 82 ASP n 1 83 VAL n 1 84 LYS n 1 85 PHE n 1 86 ASN n 1 87 GLY n 1 88 ALA n 1 89 HIS n 1 90 ILE n 1 91 PRO n 1 92 GLY n 1 93 SER n 1 94 PRO n 1 95 PHE n 1 96 LYS n 1 97 ILE n 1 98 ARG n 1 99 VAL n 1 100 GLY n 1 101 GLU n 1 102 GLN n 1 103 SER n 1 104 GLN n 1 105 ALA n 1 106 GLY n 1 107 SER n 1 108 GLY n 1 109 PRO n 1 110 SER n 1 111 SER n 1 112 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene FLNC _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P050404-13 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code FLNC_HUMAN _struct_ref.pdbx_db_accession Q14315 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SDDARRLTVTSLQETGLKVNQPASFAVQLNGARGVIDARVHTPSGAVEECYVSELDSDKHTIRFIPHENGVHSIDVKFNG AHIPGSPFKIRVGEQSQAG ; _struct_ref.pdbx_align_begin 2402 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2D7P _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 106 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q14315 _struct_ref_seq.db_align_beg 2402 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 2500 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 106 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2D7P GLY A 1 ? UNP Q14315 ? ? 'cloning artifact' 1 1 1 2D7P SER A 2 ? UNP Q14315 ? ? 'cloning artifact' 2 2 1 2D7P SER A 3 ? UNP Q14315 ? ? 'cloning artifact' 3 3 1 2D7P GLY A 4 ? UNP Q14315 ? ? 'cloning artifact' 4 4 1 2D7P SER A 5 ? UNP Q14315 ? ? 'cloning artifact' 5 5 1 2D7P SER A 6 ? UNP Q14315 ? ? 'cloning artifact' 6 6 1 2D7P GLY A 7 ? UNP Q14315 ? ? 'cloning artifact' 7 7 1 2D7P SER A 107 ? UNP Q14315 ? ? 'cloning artifact' 107 8 1 2D7P GLY A 108 ? UNP Q14315 ? ? 'cloning artifact' 108 9 1 2D7P PRO A 109 ? UNP Q14315 ? ? 'cloning artifact' 109 10 1 2D7P SER A 110 ? UNP Q14315 ? ? 'cloning artifact' 110 11 1 2D7P SER A 111 ? UNP Q14315 ? ? 'cloning artifact' 111 12 1 2D7P GLY A 112 ? UNP Q14315 ? ? 'cloning artifact' 112 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 296 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.24mM Filamin domain U-15N,13C; 20mM d-Tris-HCl(pH 7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2D7P _pdbx_nmr_refine.method 'torsion angle dynamics, restrainted molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2D7P _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function,structures with the lowest energy,structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2D7P _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20030801 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.932 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 2D7P _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2D7P _struct.title 'Solution structure of the 22th Filamin domain from human Filamin C' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2D7P _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN' _struct_keywords.text ;beta-sandwich, immunoglobulin-like fold, filamin domain, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, STRUCTURAL PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id ASP _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 9 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id LEU _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 14 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id ASP _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 9 _struct_conf.end_auth_comp_id LEU _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 14 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 1 -0.01 2 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 2 -0.07 3 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 3 -0.11 4 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 4 -0.09 5 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 5 -0.04 6 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 6 -0.10 7 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 7 -0.07 8 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 8 0.04 9 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 9 -0.07 10 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 10 -0.02 11 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 11 -0.02 12 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 12 -0.08 13 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 13 -0.04 14 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 14 -0.01 15 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 15 -0.01 16 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 16 0.01 17 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 17 -0.03 18 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 18 0.00 19 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 19 0.01 20 SER 93 A . ? SER 93 A PRO 94 A ? PRO 94 A 20 -0.04 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 15 ? VAL A 16 ? THR A 15 VAL A 16 A 2 ALA A 30 ? GLN A 35 ? ALA A 30 GLN A 35 A 3 LYS A 66 ? PHE A 71 ? LYS A 66 PHE A 71 A 4 TYR A 58 ? VAL A 59 ? TYR A 58 VAL A 59 B 1 ILE A 43 ? HIS A 48 ? ILE A 43 HIS A 48 B 2 GLY A 77 ? PHE A 85 ? GLY A 77 PHE A 85 B 3 PHE A 95 ? VAL A 99 ? PHE A 95 VAL A 99 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 15 ? N THR A 15 O GLN A 35 ? O GLN A 35 A 2 3 N PHE A 32 ? N PHE A 32 O ILE A 69 ? O ILE A 69 A 3 4 O ARG A 70 ? O ARG A 70 N TYR A 58 ? N TYR A 58 B 1 2 N ARG A 46 ? N ARG A 46 O ASP A 82 ? O ASP A 82 B 2 3 N GLY A 77 ? N GLY A 77 O VAL A 99 ? O VAL A 99 # _database_PDB_matrix.entry_id 2D7P _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2D7P _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 SER 8 8 8 SER SER A . n A 1 9 ASP 9 9 9 ASP ASP A . n A 1 10 ASP 10 10 10 ASP ASP A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 ARG 12 12 12 ARG ARG A . n A 1 13 ARG 13 13 13 ARG ARG A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 THR 17 17 17 THR THR A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 GLN 20 20 20 GLN GLN A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 GLN 28 28 28 GLN GLN A . n A 1 29 PRO 29 29 29 PRO PRO A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 PHE 32 32 32 PHE PHE A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 VAL 34 34 34 VAL VAL A . n A 1 35 GLN 35 35 35 GLN GLN A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 ARG 40 40 40 ARG ARG A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 VAL 42 42 42 VAL VAL A . n A 1 43 ILE 43 43 43 ILE ILE A . n A 1 44 ASP 44 44 44 ASP ASP A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 ARG 46 46 46 ARG ARG A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 HIS 48 48 48 HIS HIS A . n A 1 49 THR 49 49 49 THR THR A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 VAL 54 54 54 VAL VAL A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 GLU 56 56 56 GLU GLU A . n A 1 57 CYS 57 57 57 CYS CYS A . n A 1 58 TYR 58 58 58 TYR TYR A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 SER 60 60 60 SER SER A . n A 1 61 GLU 61 61 61 GLU GLU A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 ASP 63 63 63 ASP ASP A . n A 1 64 SER 64 64 64 SER SER A . n A 1 65 ASP 65 65 65 ASP ASP A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 HIS 67 67 67 HIS HIS A . n A 1 68 THR 68 68 68 THR THR A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 ARG 70 70 70 ARG ARG A . n A 1 71 PHE 71 71 71 PHE PHE A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 PRO 73 73 73 PRO PRO A . n A 1 74 HIS 74 74 74 HIS HIS A . n A 1 75 GLU 75 75 75 GLU GLU A . n A 1 76 ASN 76 76 76 ASN ASN A . n A 1 77 GLY 77 77 77 GLY GLY A . n A 1 78 VAL 78 78 78 VAL VAL A . n A 1 79 HIS 79 79 79 HIS HIS A . n A 1 80 SER 80 80 80 SER SER A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 ASP 82 82 82 ASP ASP A . n A 1 83 VAL 83 83 83 VAL VAL A . n A 1 84 LYS 84 84 84 LYS LYS A . n A 1 85 PHE 85 85 85 PHE PHE A . n A 1 86 ASN 86 86 86 ASN ASN A . n A 1 87 GLY 87 87 87 GLY GLY A . n A 1 88 ALA 88 88 88 ALA ALA A . n A 1 89 HIS 89 89 89 HIS HIS A . n A 1 90 ILE 90 90 90 ILE ILE A . n A 1 91 PRO 91 91 91 PRO PRO A . n A 1 92 GLY 92 92 92 GLY GLY A . n A 1 93 SER 93 93 93 SER SER A . n A 1 94 PRO 94 94 94 PRO PRO A . n A 1 95 PHE 95 95 95 PHE PHE A . n A 1 96 LYS 96 96 96 LYS LYS A . n A 1 97 ILE 97 97 97 ILE ILE A . n A 1 98 ARG 98 98 98 ARG ARG A . n A 1 99 VAL 99 99 99 VAL VAL A . n A 1 100 GLY 100 100 100 GLY GLY A . n A 1 101 GLU 101 101 101 GLU GLU A . n A 1 102 GLN 102 102 102 GLN GLN A . n A 1 103 SER 103 103 103 SER SER A . n A 1 104 GLN 104 104 104 GLN GLN A . n A 1 105 ALA 105 105 105 ALA ALA A . n A 1 106 GLY 106 106 106 GLY GLY A . n A 1 107 SER 107 107 107 SER SER A . n A 1 108 GLY 108 108 108 GLY GLY A . n A 1 109 PRO 109 109 109 PRO PRO A . n A 1 110 SER 110 110 110 SER SER A . n A 1 111 SER 111 111 111 SER SER A . n A 1 112 GLY 112 112 112 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-05-24 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 17 ? ? -120.30 -58.47 2 1 ASN A 86 ? ? 37.29 50.73 3 1 ALA A 88 ? ? -161.61 114.47 4 1 SER A 103 ? ? -52.37 106.58 5 2 SER A 6 ? ? -88.87 49.57 6 2 LEU A 19 ? ? -39.14 154.36 7 2 PRO A 29 ? ? -69.74 92.54 8 2 ASP A 63 ? ? -121.05 -57.28 9 2 SER A 64 ? ? -110.18 58.60 10 2 ASP A 65 ? ? 38.35 41.06 11 2 PRO A 73 ? ? -69.76 98.05 12 2 PRO A 109 ? ? -69.70 -169.80 13 3 SER A 5 ? ? -69.06 83.43 14 3 THR A 17 ? ? -108.95 -60.68 15 3 PRO A 29 ? ? -69.75 98.77 16 3 ASP A 63 ? ? -104.02 -72.08 17 3 ASP A 65 ? ? 39.57 39.77 18 3 ASN A 76 ? ? -41.65 155.87 19 3 GLN A 104 ? ? -35.46 150.07 20 3 SER A 107 ? ? -126.41 -58.29 21 4 SER A 6 ? ? -61.42 90.76 22 4 ASP A 10 ? ? -82.98 37.85 23 4 THR A 17 ? ? -125.75 -55.03 24 4 GLN A 20 ? ? -102.37 77.72 25 4 PRO A 29 ? ? -69.72 89.25 26 4 SER A 60 ? ? -63.25 -179.18 27 4 ASP A 63 ? ? -105.80 -66.89 28 4 SER A 64 ? ? -115.88 50.06 29 5 THR A 17 ? ? -128.78 -61.34 30 5 PRO A 29 ? ? -69.77 90.27 31 5 ASP A 63 ? ? -133.13 -39.31 32 5 PRO A 73 ? ? -69.72 82.89 33 5 ASN A 86 ? ? 35.50 43.48 34 6 THR A 17 ? ? -126.85 -65.61 35 6 SER A 18 ? ? -34.39 -36.92 36 6 PRO A 29 ? ? -69.72 88.62 37 6 ASP A 63 ? ? -128.30 -54.34 38 6 PRO A 73 ? ? -69.71 83.63 39 6 SER A 107 ? ? -49.25 167.14 40 6 SER A 111 ? ? 38.98 47.51 41 7 ASP A 63 ? ? -98.46 -67.90 42 7 SER A 64 ? ? -114.18 66.97 43 7 ASP A 65 ? ? 43.04 28.15 44 7 ASN A 76 ? ? -52.91 -177.88 45 7 ALA A 105 ? ? 38.00 49.47 46 7 SER A 111 ? ? -39.70 119.50 47 8 LEU A 19 ? ? -39.18 147.57 48 8 GLU A 21 ? ? -37.06 -36.93 49 8 ASN A 27 ? ? 40.05 28.64 50 8 PRO A 29 ? ? -69.73 96.01 51 8 LEU A 62 ? ? -48.40 103.16 52 9 PRO A 29 ? ? -69.74 92.14 53 9 SER A 51 ? ? -90.25 -72.93 54 9 ASP A 63 ? ? -104.86 -68.95 55 9 SER A 64 ? ? -114.61 67.97 56 9 ASP A 65 ? ? 37.34 36.76 57 9 ASN A 76 ? ? -40.56 161.15 58 10 SER A 2 ? ? -66.57 98.09 59 10 SER A 6 ? ? -97.80 43.39 60 10 SER A 8 ? ? -97.72 37.30 61 10 PRO A 29 ? ? -69.75 93.18 62 10 PRO A 73 ? ? -69.71 81.27 63 10 PRO A 109 ? ? -69.75 94.50 64 10 SER A 110 ? ? -38.82 116.78 65 11 ASP A 10 ? ? -100.24 40.38 66 11 THR A 17 ? ? -125.63 -64.59 67 11 PRO A 29 ? ? -69.79 87.91 68 11 ASN A 76 ? ? -42.53 154.75 69 11 ASN A 86 ? ? 71.95 40.77 70 12 THR A 17 ? ? -126.36 -63.13 71 12 PRO A 29 ? ? -69.77 91.59 72 12 PRO A 73 ? ? -69.74 97.96 73 13 SER A 18 ? ? -35.90 -35.12 74 13 PRO A 29 ? ? -69.76 90.50 75 13 SER A 60 ? ? -68.30 -176.16 76 13 GLU A 61 ? ? -59.91 170.58 77 13 ASP A 65 ? ? 35.42 37.07 78 13 PRO A 73 ? ? -69.71 84.86 79 13 ALA A 88 ? ? -161.00 117.21 80 13 SER A 103 ? ? -47.47 151.19 81 13 ALA A 105 ? ? -66.40 89.80 82 14 SER A 6 ? ? -42.45 150.32 83 14 PRO A 29 ? ? -69.79 90.34 84 14 ASP A 63 ? ? -121.72 -70.75 85 14 SER A 64 ? ? -109.96 68.40 86 14 ASP A 65 ? ? 35.91 38.32 87 14 PRO A 73 ? ? -69.81 88.46 88 14 ALA A 105 ? ? -91.33 -62.15 89 14 SER A 110 ? ? -54.13 175.34 90 15 SER A 5 ? ? -47.65 99.82 91 15 SER A 6 ? ? -82.00 42.71 92 15 THR A 17 ? ? -129.45 -59.22 93 15 PRO A 29 ? ? -69.81 97.95 94 15 SER A 60 ? ? -47.56 -73.83 95 15 GLU A 61 ? ? -174.14 -177.28 96 15 PRO A 73 ? ? -69.84 89.87 97 15 SER A 103 ? ? -66.93 83.69 98 15 PRO A 109 ? ? -69.81 81.45 99 16 SER A 3 ? ? -55.30 107.78 100 16 SER A 6 ? ? -58.17 171.32 101 16 THR A 17 ? ? -120.23 -54.63 102 16 PRO A 29 ? ? -69.77 91.68 103 16 SER A 60 ? ? -56.25 174.29 104 16 GLU A 61 ? ? -56.57 173.03 105 16 SER A 64 ? ? 49.81 29.14 106 16 PRO A 73 ? ? -69.77 95.71 107 16 GLN A 104 ? ? 36.09 32.56 108 17 PRO A 29 ? ? -69.66 94.14 109 17 ALA A 39 ? ? -49.12 156.55 110 17 ASP A 63 ? ? -133.43 -54.31 111 17 ASP A 65 ? ? 70.10 31.71 112 17 PRO A 73 ? ? -69.72 86.04 113 17 PRO A 109 ? ? -69.79 89.18 114 18 PRO A 29 ? ? -69.74 86.45 115 18 SER A 60 ? ? -62.74 -175.73 116 18 ASP A 63 ? ? -131.34 -71.50 117 18 SER A 64 ? ? -92.63 38.06 118 18 PRO A 73 ? ? -69.80 82.38 119 19 THR A 17 ? ? -124.33 -57.86 120 19 PRO A 29 ? ? -69.72 94.08 121 19 ARG A 40 ? ? -160.63 109.11 122 19 SER A 60 ? ? -84.31 -73.37 123 19 ASP A 63 ? ? -130.74 -49.08 124 19 PRO A 73 ? ? -69.72 89.45 125 19 SER A 103 ? ? -35.95 139.91 126 20 THR A 17 ? ? -108.42 -67.66 127 20 LEU A 19 ? ? -36.39 154.18 128 20 PRO A 29 ? ? -69.78 81.35 129 20 SER A 60 ? ? -55.55 -178.37 130 20 SER A 64 ? ? -52.19 94.05 131 20 ASP A 65 ? ? 37.04 34.50 132 20 PRO A 73 ? ? -69.78 81.90 133 20 GLN A 104 ? ? -62.49 92.72 134 20 ALA A 105 ? ? -51.80 101.06 135 20 PRO A 109 ? ? -69.78 93.63 #