data_2D85 # _entry.id 2D85 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2D85 pdb_00002d85 10.2210/pdb2d85/pdb RCSB RCSB025106 ? ? WWPDB D_1000025106 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hss001003823.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2D85 _pdbx_database_status.recvd_initial_deposition_date 2005-12-02 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tomizawa, T.' 1 'Kigawa, T.' 2 'Koshiba, S.' 3 'Inoue, M.' 4 'Yokoyama, S.' 5 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 6 # _citation.id primary _citation.title 'Solution structure of the fourth CH domain from human L-plastin' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tomizawa, T.' 1 ? primary 'Kigawa, T.' 2 ? primary 'Koshiba, S.' 3 ? primary 'Inoue, M.' 4 ? primary 'Yokoyama, S.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description L-plastin _entity.formula_weight 13380.201 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'CH domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Lymphocyte cytosolic protein 1, LCP-1, LC64P' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGNDDIIVNWVNETLREAEKSSSISSFKDPKISTSLPVLDLIDAIQPGSINYDLLKTENLNDDEKLNNAKYAISM ARKIGARVYALPEDLVEVNPKMVMTVFACLMGKGMKRVSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGNDDIIVNWVNETLREAEKSSSISSFKDPKISTSLPVLDLIDAIQPGSINYDLLKTENLNDDEKLNNAKYAISM ARKIGARVYALPEDLVEVNPKMVMTVFACLMGKGMKRVSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hss001003823.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 ASN n 1 9 ASP n 1 10 ASP n 1 11 ILE n 1 12 ILE n 1 13 VAL n 1 14 ASN n 1 15 TRP n 1 16 VAL n 1 17 ASN n 1 18 GLU n 1 19 THR n 1 20 LEU n 1 21 ARG n 1 22 GLU n 1 23 ALA n 1 24 GLU n 1 25 LYS n 1 26 SER n 1 27 SER n 1 28 SER n 1 29 ILE n 1 30 SER n 1 31 SER n 1 32 PHE n 1 33 LYS n 1 34 ASP n 1 35 PRO n 1 36 LYS n 1 37 ILE n 1 38 SER n 1 39 THR n 1 40 SER n 1 41 LEU n 1 42 PRO n 1 43 VAL n 1 44 LEU n 1 45 ASP n 1 46 LEU n 1 47 ILE n 1 48 ASP n 1 49 ALA n 1 50 ILE n 1 51 GLN n 1 52 PRO n 1 53 GLY n 1 54 SER n 1 55 ILE n 1 56 ASN n 1 57 TYR n 1 58 ASP n 1 59 LEU n 1 60 LEU n 1 61 LYS n 1 62 THR n 1 63 GLU n 1 64 ASN n 1 65 LEU n 1 66 ASN n 1 67 ASP n 1 68 ASP n 1 69 GLU n 1 70 LYS n 1 71 LEU n 1 72 ASN n 1 73 ASN n 1 74 ALA n 1 75 LYS n 1 76 TYR n 1 77 ALA n 1 78 ILE n 1 79 SER n 1 80 MET n 1 81 ALA n 1 82 ARG n 1 83 LYS n 1 84 ILE n 1 85 GLY n 1 86 ALA n 1 87 ARG n 1 88 VAL n 1 89 TYR n 1 90 ALA n 1 91 LEU n 1 92 PRO n 1 93 GLU n 1 94 ASP n 1 95 LEU n 1 96 VAL n 1 97 GLU n 1 98 VAL n 1 99 ASN n 1 100 PRO n 1 101 LYS n 1 102 MET n 1 103 VAL n 1 104 MET n 1 105 THR n 1 106 VAL n 1 107 PHE n 1 108 ALA n 1 109 CYS n 1 110 LEU n 1 111 MET n 1 112 GLY n 1 113 LYS n 1 114 GLY n 1 115 MET n 1 116 LYS n 1 117 ARG n 1 118 VAL n 1 119 SER n 1 120 GLY n 1 121 PRO n 1 122 SER n 1 123 SER n 1 124 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene LCP1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P050111-01 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PLSL_HUMAN _struct_ref.pdbx_db_accession P13796 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;NDDIIVNWVNETLREAEKSSSISSFKDPKISTSLPVLDLIDAIQPGSINYDLLKTENLNDDEKLNNAKYAISMARKIGAR VYALPEDLVEVNPKMVMTVFACLMGKGMKRV ; _struct_ref.pdbx_align_begin 517 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2D85 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 118 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P13796 _struct_ref_seq.db_align_beg 517 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 627 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 118 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2D85 GLY A 1 ? UNP P13796 ? ? 'cloning artifact' 1 1 1 2D85 SER A 2 ? UNP P13796 ? ? 'cloning artifact' 2 2 1 2D85 SER A 3 ? UNP P13796 ? ? 'cloning artifact' 3 3 1 2D85 GLY A 4 ? UNP P13796 ? ? 'cloning artifact' 4 4 1 2D85 SER A 5 ? UNP P13796 ? ? 'cloning artifact' 5 5 1 2D85 SER A 6 ? UNP P13796 ? ? 'cloning artifact' 6 6 1 2D85 GLY A 7 ? UNP P13796 ? ? 'cloning artifact' 7 7 1 2D85 SER A 119 ? UNP P13796 ? ? 'cloning artifact' 119 8 1 2D85 GLY A 120 ? UNP P13796 ? ? 'cloning artifact' 120 9 1 2D85 PRO A 121 ? UNP P13796 ? ? 'cloning artifact' 121 10 1 2D85 SER A 122 ? UNP P13796 ? ? 'cloning artifact' 122 11 1 2D85 SER A 123 ? UNP P13796 ? ? 'cloning artifact' 123 12 1 2D85 GLY A 124 ? UNP P13796 ? ? 'cloning artifact' 124 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 296 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 220mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.14mM CH domain U-15N,13C; 20mM d-Tris-HCl(pH 7.0); 200mM NaCl; 1mM d-DTT; 0.02% NaN3; 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2D85 _pdbx_nmr_refine.method 'torsion angle dynamics, restrainted molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2D85 _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function,structures with the lowest energy,structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2D85 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 2.6 Bruker 1 processing NMRPipe 20030801 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.932 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 2D85 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2D85 _struct.title 'Solution structure of the fourth CH domain from human L-plastin' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2D85 _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN, PROTEIN BINDING' _struct_keywords.text ;all alpha, calponin homology domain, actin binding, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, STRUCTURAL PROTEIN, PROTEIN BINDING ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 10 ? GLU A 24 ? ASP A 10 GLU A 24 1 ? 15 HELX_P HELX_P2 2 PRO A 35 ? THR A 39 ? PRO A 35 THR A 39 5 ? 5 HELX_P HELX_P3 3 SER A 40 ? GLN A 51 ? SER A 40 GLN A 51 1 ? 12 HELX_P HELX_P4 4 ASN A 66 ? GLY A 85 ? ASN A 66 GLY A 85 1 ? 20 HELX_P HELX_P5 5 LEU A 91 ? VAL A 96 ? LEU A 91 VAL A 96 1 ? 6 HELX_P HELX_P6 6 ASN A 99 ? MET A 104 ? ASN A 99 MET A 104 1 ? 6 HELX_P HELX_P7 7 THR A 105 ? GLY A 112 ? THR A 105 GLY A 112 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _database_PDB_matrix.entry_id 2D85 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2D85 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 ASN 8 8 8 ASN ASN A . n A 1 9 ASP 9 9 9 ASP ASP A . n A 1 10 ASP 10 10 10 ASP ASP A . n A 1 11 ILE 11 11 11 ILE ILE A . n A 1 12 ILE 12 12 12 ILE ILE A . n A 1 13 VAL 13 13 13 VAL VAL A . n A 1 14 ASN 14 14 14 ASN ASN A . n A 1 15 TRP 15 15 15 TRP TRP A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 ASN 17 17 17 ASN ASN A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 THR 19 19 19 THR THR A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 GLU 24 24 24 GLU GLU A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 SER 27 27 27 SER SER A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 ILE 29 29 29 ILE ILE A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 PHE 32 32 32 PHE PHE A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 ASP 34 34 34 ASP ASP A . n A 1 35 PRO 35 35 35 PRO PRO A . n A 1 36 LYS 36 36 36 LYS LYS A . n A 1 37 ILE 37 37 37 ILE ILE A . n A 1 38 SER 38 38 38 SER SER A . n A 1 39 THR 39 39 39 THR THR A . n A 1 40 SER 40 40 40 SER SER A . n A 1 41 LEU 41 41 41 LEU LEU A . n A 1 42 PRO 42 42 42 PRO PRO A . n A 1 43 VAL 43 43 43 VAL VAL A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 ASP 45 45 45 ASP ASP A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 ILE 47 47 47 ILE ILE A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 GLN 51 51 51 GLN GLN A . n A 1 52 PRO 52 52 52 PRO PRO A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 SER 54 54 54 SER SER A . n A 1 55 ILE 55 55 55 ILE ILE A . n A 1 56 ASN 56 56 56 ASN ASN A . n A 1 57 TYR 57 57 57 TYR TYR A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 LEU 59 59 59 LEU LEU A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 THR 62 62 62 THR THR A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 ASN 64 64 64 ASN ASN A . n A 1 65 LEU 65 65 65 LEU LEU A . n A 1 66 ASN 66 66 66 ASN ASN A . n A 1 67 ASP 67 67 67 ASP ASP A . n A 1 68 ASP 68 68 68 ASP ASP A . n A 1 69 GLU 69 69 69 GLU GLU A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 ASN 72 72 72 ASN ASN A . n A 1 73 ASN 73 73 73 ASN ASN A . n A 1 74 ALA 74 74 74 ALA ALA A . n A 1 75 LYS 75 75 75 LYS LYS A . n A 1 76 TYR 76 76 76 TYR TYR A . n A 1 77 ALA 77 77 77 ALA ALA A . n A 1 78 ILE 78 78 78 ILE ILE A . n A 1 79 SER 79 79 79 SER SER A . n A 1 80 MET 80 80 80 MET MET A . n A 1 81 ALA 81 81 81 ALA ALA A . n A 1 82 ARG 82 82 82 ARG ARG A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 GLY 85 85 85 GLY GLY A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 ARG 87 87 87 ARG ARG A . n A 1 88 VAL 88 88 88 VAL VAL A . n A 1 89 TYR 89 89 89 TYR TYR A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 PRO 92 92 92 PRO PRO A . n A 1 93 GLU 93 93 93 GLU GLU A . n A 1 94 ASP 94 94 94 ASP ASP A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 VAL 96 96 96 VAL VAL A . n A 1 97 GLU 97 97 97 GLU GLU A . n A 1 98 VAL 98 98 98 VAL VAL A . n A 1 99 ASN 99 99 99 ASN ASN A . n A 1 100 PRO 100 100 100 PRO PRO A . n A 1 101 LYS 101 101 101 LYS LYS A . n A 1 102 MET 102 102 102 MET MET A . n A 1 103 VAL 103 103 103 VAL VAL A . n A 1 104 MET 104 104 104 MET MET A . n A 1 105 THR 105 105 105 THR THR A . n A 1 106 VAL 106 106 106 VAL VAL A . n A 1 107 PHE 107 107 107 PHE PHE A . n A 1 108 ALA 108 108 108 ALA ALA A . n A 1 109 CYS 109 109 109 CYS CYS A . n A 1 110 LEU 110 110 110 LEU LEU A . n A 1 111 MET 111 111 111 MET MET A . n A 1 112 GLY 112 112 112 GLY GLY A . n A 1 113 LYS 113 113 113 LYS LYS A . n A 1 114 GLY 114 114 114 GLY GLY A . n A 1 115 MET 115 115 115 MET MET A . n A 1 116 LYS 116 116 116 LYS LYS A . n A 1 117 ARG 117 117 117 ARG ARG A . n A 1 118 VAL 118 118 118 VAL VAL A . n A 1 119 SER 119 119 119 SER SER A . n A 1 120 GLY 120 120 120 GLY GLY A . n A 1 121 PRO 121 121 121 PRO PRO A . n A 1 122 SER 122 122 122 SER SER A . n A 1 123 SER 123 123 123 SER SER A . n A 1 124 GLY 124 124 124 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-06-02 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 2 ? ? -81.75 42.50 2 1 ASN A 8 ? ? -41.42 162.21 3 1 LEU A 65 ? ? -50.74 176.84 4 1 ASP A 67 ? ? -37.61 -34.35 5 1 ASN A 72 ? ? -39.73 -38.23 6 1 ARG A 87 ? ? -34.50 99.41 7 1 VAL A 98 ? ? 33.77 51.71 8 1 VAL A 106 ? ? -66.17 -72.62 9 1 PRO A 121 ? ? -69.74 83.70 10 2 LYS A 33 ? ? -94.59 40.15 11 2 ASN A 64 ? ? 34.70 38.21 12 2 LEU A 65 ? ? -41.79 150.85 13 2 ASP A 67 ? ? -34.19 -34.24 14 2 ARG A 87 ? ? -57.38 98.04 15 2 TYR A 89 ? ? -119.34 59.02 16 2 VAL A 98 ? ? 36.64 54.55 17 2 MET A 115 ? ? -52.18 88.75 18 2 SER A 119 ? ? -36.00 127.20 19 2 SER A 122 ? ? 35.52 42.17 20 3 ASN A 8 ? ? -51.11 178.32 21 3 GLU A 24 ? ? 72.43 43.59 22 3 LYS A 61 ? ? -93.73 -60.63 23 3 THR A 62 ? ? 40.43 27.25 24 3 LEU A 65 ? ? -45.46 153.34 25 3 ASP A 67 ? ? -34.46 -33.40 26 3 LYS A 70 ? ? -37.77 -39.99 27 3 ALA A 86 ? ? -175.06 130.95 28 3 TYR A 89 ? ? 36.12 43.85 29 3 GLU A 93 ? ? -39.43 -32.19 30 3 VAL A 98 ? ? 33.93 48.62 31 4 SER A 6 ? ? -36.65 127.58 32 4 ASN A 8 ? ? -115.48 62.59 33 4 THR A 19 ? ? -39.90 -37.62 34 4 ASP A 67 ? ? -38.16 -31.59 35 4 ALA A 86 ? ? -34.44 103.60 36 4 ARG A 87 ? ? -55.81 171.60 37 5 SER A 5 ? ? -48.63 159.32 38 5 ASN A 8 ? ? -61.71 -175.05 39 5 GLU A 24 ? ? 74.00 37.34 40 5 LYS A 33 ? ? -105.94 43.58 41 5 LYS A 61 ? ? -104.94 -60.72 42 5 ASN A 64 ? ? 36.06 47.47 43 5 ASP A 67 ? ? -38.70 -32.30 44 5 ALA A 86 ? ? -173.55 129.63 45 5 ASN A 99 ? ? -37.93 99.82 46 6 GLU A 24 ? ? 71.46 42.83 47 6 PHE A 32 ? ? -38.17 -29.04 48 6 LYS A 33 ? ? -99.04 43.13 49 6 LYS A 61 ? ? -91.12 -62.14 50 6 ASN A 64 ? ? 35.16 36.81 51 6 LEU A 65 ? ? -42.96 151.11 52 6 ASP A 67 ? ? -34.46 -32.75 53 6 ALA A 86 ? ? -174.55 115.09 54 6 TYR A 89 ? ? -114.23 51.20 55 6 PRO A 100 ? ? -69.84 0.33 56 7 SER A 5 ? ? -37.92 139.08 57 7 SER A 6 ? ? -120.50 -52.55 58 7 LYS A 33 ? ? -103.97 47.09 59 7 THR A 62 ? ? 39.30 27.94 60 7 LEU A 65 ? ? -42.63 160.82 61 7 ASP A 67 ? ? -36.22 -30.46 62 7 ALA A 86 ? ? -174.88 107.15 63 7 TYR A 89 ? ? -103.96 55.95 64 7 GLU A 97 ? ? -98.61 41.98 65 7 VAL A 98 ? ? 33.61 47.80 66 7 SER A 119 ? ? -174.97 136.77 67 8 GLU A 24 ? ? 70.15 44.45 68 8 LYS A 33 ? ? -103.14 43.80 69 8 LYS A 61 ? ? -97.75 -65.02 70 8 ASN A 64 ? ? 38.72 46.94 71 8 LEU A 65 ? ? -49.62 174.74 72 8 ASP A 67 ? ? -34.63 -38.02 73 8 ASP A 68 ? ? -73.22 -71.35 74 8 VAL A 98 ? ? 34.89 47.54 75 8 PRO A 100 ? ? -69.71 0.75 76 9 THR A 19 ? ? -39.36 -37.03 77 9 GLU A 24 ? ? 74.97 47.01 78 9 LYS A 33 ? ? -102.54 44.44 79 9 SER A 54 ? ? -131.08 -57.63 80 9 THR A 62 ? ? 42.43 28.61 81 9 ASN A 64 ? ? 36.28 39.29 82 9 LEU A 65 ? ? -45.76 159.89 83 9 ARG A 87 ? ? -164.78 114.66 84 9 GLU A 97 ? ? -90.01 38.44 85 9 VAL A 98 ? ? 33.78 53.96 86 9 LEU A 110 ? ? -69.09 -70.80 87 9 SER A 119 ? ? 38.16 52.16 88 10 THR A 19 ? ? -39.35 -38.23 89 10 ASN A 64 ? ? 38.03 52.46 90 10 ASP A 67 ? ? -38.82 -31.78 91 10 ALA A 86 ? ? -43.96 104.74 92 10 ALA A 90 ? ? -171.81 -179.64 93 10 VAL A 103 ? ? -49.36 -19.60 94 10 MET A 111 ? ? -48.56 -19.14 95 10 MET A 115 ? ? -60.53 84.44 96 10 PRO A 121 ? ? -69.72 2.03 97 11 SER A 3 ? ? -50.45 99.36 98 11 ASN A 8 ? ? -92.72 59.81 99 11 GLU A 24 ? ? 72.40 46.85 100 11 LYS A 33 ? ? -101.67 40.48 101 11 THR A 62 ? ? 42.89 26.13 102 11 ASN A 64 ? ? 34.34 46.41 103 11 ALA A 86 ? ? -36.36 123.96 104 11 TYR A 89 ? ? -95.16 49.39 105 11 MET A 111 ? ? -47.28 -20.00 106 11 ARG A 117 ? ? -63.36 -178.07 107 12 SER A 6 ? ? -96.20 39.07 108 12 GLU A 24 ? ? 74.74 41.38 109 12 LYS A 33 ? ? -100.34 43.37 110 12 ASN A 64 ? ? 37.58 46.36 111 12 ASP A 67 ? ? -39.56 -28.42 112 12 MET A 115 ? ? -45.29 154.22 113 13 GLU A 24 ? ? 72.29 44.75 114 13 LYS A 33 ? ? -96.77 40.33 115 13 LYS A 61 ? ? -104.42 -60.55 116 13 THR A 62 ? ? 43.43 27.65 117 13 ASN A 64 ? ? 37.66 47.30 118 13 ASP A 67 ? ? -34.62 -38.89 119 13 ASP A 68 ? ? -72.68 -70.77 120 13 ALA A 86 ? ? -173.90 109.09 121 13 TYR A 89 ? ? -119.68 52.13 122 13 LEU A 110 ? ? -83.35 -70.98 123 13 LYS A 116 ? ? 39.61 40.23 124 13 PRO A 121 ? ? -69.72 -174.46 125 14 SER A 2 ? ? -49.92 161.96 126 14 SER A 28 ? ? -175.07 -176.55 127 14 LYS A 33 ? ? -107.59 46.30 128 14 SER A 54 ? ? -123.15 -59.92 129 14 LYS A 61 ? ? -107.50 -60.07 130 14 ASN A 64 ? ? 34.52 42.62 131 14 ASP A 67 ? ? -37.42 -33.36 132 14 ALA A 86 ? ? -174.84 144.33 133 14 TYR A 89 ? ? 36.35 40.91 134 14 VAL A 98 ? ? 39.42 51.98 135 14 MET A 104 ? ? -38.97 -39.08 136 14 MET A 115 ? ? -174.29 119.42 137 14 VAL A 118 ? ? -39.48 127.94 138 14 SER A 119 ? ? -98.66 46.27 139 15 TRP A 15 ? ? -45.97 -70.30 140 15 SER A 28 ? ? -174.71 -178.08 141 15 LYS A 33 ? ? -107.76 43.90 142 15 LYS A 61 ? ? -91.88 -62.22 143 15 THR A 62 ? ? 47.46 29.83 144 15 TYR A 89 ? ? -91.72 48.08 145 15 VAL A 98 ? ? 34.37 53.37 146 15 MET A 104 ? ? -37.48 -33.75 147 15 PRO A 121 ? ? -69.78 -171.78 148 16 GLU A 24 ? ? 72.81 43.81 149 16 LYS A 33 ? ? -109.35 51.59 150 16 SER A 54 ? ? -126.40 -61.54 151 16 LYS A 61 ? ? -79.51 -70.42 152 16 LEU A 65 ? ? -42.80 167.38 153 16 ASP A 68 ? ? -91.90 -71.01 154 16 ALA A 86 ? ? -163.21 106.74 155 16 TYR A 89 ? ? -107.89 57.00 156 16 ASN A 99 ? ? -42.50 102.61 157 16 PRO A 100 ? ? -69.80 0.37 158 16 LEU A 110 ? ? -83.96 -70.92 159 17 SER A 6 ? ? -57.69 175.35 160 17 LYS A 33 ? ? -100.00 44.79 161 17 THR A 62 ? ? 41.63 27.84 162 17 LEU A 65 ? ? -52.95 174.24 163 17 ASP A 67 ? ? -38.57 -32.76 164 17 ALA A 90 ? ? -35.83 152.92 165 17 GLU A 97 ? ? -94.96 33.58 166 17 VAL A 98 ? ? 35.17 48.94 167 17 PRO A 100 ? ? -69.74 0.50 168 17 SER A 122 ? ? -49.05 104.03 169 18 GLU A 24 ? ? 72.10 45.69 170 18 LYS A 33 ? ? -103.38 43.26 171 18 LYS A 61 ? ? -77.69 -75.54 172 18 ASP A 67 ? ? -35.34 -31.24 173 18 ALA A 86 ? ? -169.99 114.66 174 18 ARG A 87 ? ? -63.85 93.93 175 18 TYR A 89 ? ? -92.67 51.42 176 18 GLU A 97 ? ? -90.70 37.37 177 18 VAL A 98 ? ? 33.82 53.11 178 18 MET A 104 ? ? -35.59 -33.90 179 19 GLU A 24 ? ? 75.05 35.56 180 19 LYS A 33 ? ? -96.75 39.40 181 19 LEU A 60 ? ? -51.69 171.13 182 19 THR A 62 ? ? 33.42 33.37 183 19 ASN A 64 ? ? 37.36 40.33 184 19 LEU A 65 ? ? -43.01 164.96 185 19 ASP A 67 ? ? -39.00 -27.38 186 19 ALA A 86 ? ? -174.14 109.08 187 19 TYR A 89 ? ? -118.92 72.35 188 19 GLU A 97 ? ? -93.65 37.64 189 19 VAL A 98 ? ? 34.92 52.88 190 19 LEU A 110 ? ? -79.52 -70.28 191 19 MET A 115 ? ? -49.33 174.55 192 20 THR A 19 ? ? -39.13 -36.99 193 20 GLU A 24 ? ? 72.95 48.03 194 20 LYS A 33 ? ? -102.98 42.01 195 20 LEU A 60 ? ? -56.97 173.69 196 20 LYS A 61 ? ? -109.34 -64.94 197 20 THR A 62 ? ? 44.87 27.85 198 20 ASN A 64 ? ? 39.79 39.27 199 20 LEU A 65 ? ? -45.88 167.10 200 20 ASP A 67 ? ? -35.37 -32.90 201 20 ASP A 68 ? ? -76.66 -70.03 202 20 ALA A 86 ? ? -170.61 120.39 203 20 MET A 115 ? ? -45.84 163.34 204 20 SER A 122 ? ? -134.54 -44.05 205 20 SER A 123 ? ? -39.11 115.28 #