data_2D89 # _entry.id 2D89 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2D89 pdb_00002d89 10.2210/pdb2d89/pdb RCSB RCSB025110 ? ? WWPDB D_1000025110 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsk002100880.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2D89 _pdbx_database_status.recvd_initial_deposition_date 2005-12-02 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tomizawa, T.' 1 'Kigawa, T.' 2 'Koshiba, S.' 3 'Inoue, M.' 4 'Yokoyama, S.' 5 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 6 # _citation.id primary _citation.title 'Solution structure of the CH domain from human EH domain binding protein 1' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tomizawa, T.' 1 ? primary 'Kigawa, T.' 2 ? primary 'Koshiba, S.' 3 ? primary 'Inoue, M.' 4 ? primary 'Yokoyama, S.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'EHBP1 protein' _entity.formula_weight 13186.970 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'CH domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'EH domain binding protein 1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGPNASQSLLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHFRPDLIDYKSLNPQDIKENNKKAYDGFASIG ISRLLEPSDMVLLAIPDKLTVMTYLYQIRAHFSSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGPNASQSLLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHFRPDLIDYKSLNPQDIKENNKKAYDGFASIG ISRLLEPSDMVLLAIPDKLTVMTYLYQIRAHFSSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsk002100880.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 PRO n 1 9 ASN n 1 10 ALA n 1 11 SER n 1 12 GLN n 1 13 SER n 1 14 LEU n 1 15 LEU n 1 16 VAL n 1 17 TRP n 1 18 CYS n 1 19 LYS n 1 20 GLU n 1 21 VAL n 1 22 THR n 1 23 LYS n 1 24 ASN n 1 25 TYR n 1 26 ARG n 1 27 GLY n 1 28 VAL n 1 29 LYS n 1 30 ILE n 1 31 THR n 1 32 ASN n 1 33 PHE n 1 34 THR n 1 35 THR n 1 36 SER n 1 37 TRP n 1 38 ARG n 1 39 ASN n 1 40 GLY n 1 41 LEU n 1 42 SER n 1 43 PHE n 1 44 CYS n 1 45 ALA n 1 46 ILE n 1 47 LEU n 1 48 HIS n 1 49 HIS n 1 50 PHE n 1 51 ARG n 1 52 PRO n 1 53 ASP n 1 54 LEU n 1 55 ILE n 1 56 ASP n 1 57 TYR n 1 58 LYS n 1 59 SER n 1 60 LEU n 1 61 ASN n 1 62 PRO n 1 63 GLN n 1 64 ASP n 1 65 ILE n 1 66 LYS n 1 67 GLU n 1 68 ASN n 1 69 ASN n 1 70 LYS n 1 71 LYS n 1 72 ALA n 1 73 TYR n 1 74 ASP n 1 75 GLY n 1 76 PHE n 1 77 ALA n 1 78 SER n 1 79 ILE n 1 80 GLY n 1 81 ILE n 1 82 SER n 1 83 ARG n 1 84 LEU n 1 85 LEU n 1 86 GLU n 1 87 PRO n 1 88 SER n 1 89 ASP n 1 90 MET n 1 91 VAL n 1 92 LEU n 1 93 LEU n 1 94 ALA n 1 95 ILE n 1 96 PRO n 1 97 ASP n 1 98 LYS n 1 99 LEU n 1 100 THR n 1 101 VAL n 1 102 MET n 1 103 THR n 1 104 TYR n 1 105 LEU n 1 106 TYR n 1 107 GLN n 1 108 ILE n 1 109 ARG n 1 110 ALA n 1 111 HIS n 1 112 PHE n 1 113 SER n 1 114 SER n 1 115 GLY n 1 116 PRO n 1 117 SER n 1 118 SER n 1 119 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene EHBP1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P050725-07 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name GB _struct_ref.db_code AAH67215 _struct_ref.pdbx_db_accession 45501001 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PNASQSLLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHFRPDLIDYKSLNPQDIKENNKKAYDGFASIGISRLLEP SDMVLLAIPDKLTVMTYLYQIRAHFS ; _struct_ref.pdbx_align_begin 408 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2D89 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 113 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 45501001 _struct_ref_seq.db_align_beg 408 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 513 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 113 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2D89 GLY A 1 ? GB 45501001 ? ? 'cloning artifact' 1 1 1 2D89 SER A 2 ? GB 45501001 ? ? 'cloning artifact' 2 2 1 2D89 SER A 3 ? GB 45501001 ? ? 'cloning artifact' 3 3 1 2D89 GLY A 4 ? GB 45501001 ? ? 'cloning artifact' 4 4 1 2D89 SER A 5 ? GB 45501001 ? ? 'cloning artifact' 5 5 1 2D89 SER A 6 ? GB 45501001 ? ? 'cloning artifact' 6 6 1 2D89 GLY A 7 ? GB 45501001 ? ? 'cloning artifact' 7 7 1 2D89 SER A 114 ? GB 45501001 ? ? 'cloning artifact' 114 8 1 2D89 GLY A 115 ? GB 45501001 ? ? 'cloning artifact' 115 9 1 2D89 PRO A 116 ? GB 45501001 ? ? 'cloning artifact' 116 10 1 2D89 SER A 117 ? GB 45501001 ? ? 'cloning artifact' 117 11 1 2D89 SER A 118 ? GB 45501001 ? ? 'cloning artifact' 118 12 1 2D89 GLY A 119 ? GB 45501001 ? ? 'cloning artifact' 119 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 296 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '0.85mM CH domain U-15N, 13C; 20mM d-Tris-HCl(pH 7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 10% D2' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2D89 _pdbx_nmr_refine.method 'torsion angle dynamics, restrainted molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2D89 _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function, structures with the lowest energy, structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2D89 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20030801 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.932 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 2D89 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2D89 _struct.title 'Solution structure of the CH domain from human EH domain binding protein 1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2D89 _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN, PROTEIN BINDING' _struct_keywords.text ;all alpha, calponin homology domain, actin binding, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, STRUCTURAL PROTEIN, PROTEIN BINDING ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 10 ? THR A 22 ? ALA A 10 THR A 22 1 ? 13 HELX_P HELX_P2 2 THR A 34 ? ASN A 39 ? THR A 34 ASN A 39 1 ? 6 HELX_P HELX_P3 3 GLY A 40 ? ARG A 51 ? GLY A 40 ARG A 51 1 ? 12 HELX_P HELX_P4 4 ASP A 56 ? LEU A 60 ? ASP A 56 LEU A 60 5 ? 5 HELX_P HELX_P5 5 ILE A 65 ? ALA A 77 ? ILE A 65 ALA A 77 1 ? 13 HELX_P HELX_P6 6 GLU A 86 ? LEU A 93 ? GLU A 86 LEU A 93 1 ? 8 HELX_P HELX_P7 7 ASP A 97 ? SER A 113 ? ASP A 97 SER A 113 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _database_PDB_matrix.entry_id 2D89 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2D89 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 PRO 8 8 8 PRO PRO A . n A 1 9 ASN 9 9 9 ASN ASN A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 SER 11 11 11 SER SER A . n A 1 12 GLN 12 12 12 GLN GLN A . n A 1 13 SER 13 13 13 SER SER A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 TRP 17 17 17 TRP TRP A . n A 1 18 CYS 18 18 18 CYS CYS A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 GLU 20 20 20 GLU GLU A . n A 1 21 VAL 21 21 21 VAL VAL A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 LYS 23 23 23 LYS LYS A . n A 1 24 ASN 24 24 24 ASN ASN A . n A 1 25 TYR 25 25 25 TYR TYR A . n A 1 26 ARG 26 26 26 ARG ARG A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 ASN 32 32 32 ASN ASN A . n A 1 33 PHE 33 33 33 PHE PHE A . n A 1 34 THR 34 34 34 THR THR A . n A 1 35 THR 35 35 35 THR THR A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 TRP 37 37 37 TRP TRP A . n A 1 38 ARG 38 38 38 ARG ARG A . n A 1 39 ASN 39 39 39 ASN ASN A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 LEU 41 41 41 LEU LEU A . n A 1 42 SER 42 42 42 SER SER A . n A 1 43 PHE 43 43 43 PHE PHE A . n A 1 44 CYS 44 44 44 CYS CYS A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 ILE 46 46 46 ILE ILE A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 HIS 48 48 48 HIS HIS A . n A 1 49 HIS 49 49 49 HIS HIS A . n A 1 50 PHE 50 50 50 PHE PHE A . n A 1 51 ARG 51 51 51 ARG ARG A . n A 1 52 PRO 52 52 52 PRO PRO A . n A 1 53 ASP 53 53 53 ASP ASP A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 ILE 55 55 55 ILE ILE A . n A 1 56 ASP 56 56 56 ASP ASP A . n A 1 57 TYR 57 57 57 TYR TYR A . n A 1 58 LYS 58 58 58 LYS LYS A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 ASN 61 61 61 ASN ASN A . n A 1 62 PRO 62 62 62 PRO PRO A . n A 1 63 GLN 63 63 63 GLN GLN A . n A 1 64 ASP 64 64 64 ASP ASP A . n A 1 65 ILE 65 65 65 ILE ILE A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 GLU 67 67 67 GLU GLU A . n A 1 68 ASN 68 68 68 ASN ASN A . n A 1 69 ASN 69 69 69 ASN ASN A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 LYS 71 71 71 LYS LYS A . n A 1 72 ALA 72 72 72 ALA ALA A . n A 1 73 TYR 73 73 73 TYR TYR A . n A 1 74 ASP 74 74 74 ASP ASP A . n A 1 75 GLY 75 75 75 GLY GLY A . n A 1 76 PHE 76 76 76 PHE PHE A . n A 1 77 ALA 77 77 77 ALA ALA A . n A 1 78 SER 78 78 78 SER SER A . n A 1 79 ILE 79 79 79 ILE ILE A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 SER 82 82 82 SER SER A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 LEU 85 85 85 LEU LEU A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 PRO 87 87 87 PRO PRO A . n A 1 88 SER 88 88 88 SER SER A . n A 1 89 ASP 89 89 89 ASP ASP A . n A 1 90 MET 90 90 90 MET MET A . n A 1 91 VAL 91 91 91 VAL VAL A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 ALA 94 94 94 ALA ALA A . n A 1 95 ILE 95 95 95 ILE ILE A . n A 1 96 PRO 96 96 96 PRO PRO A . n A 1 97 ASP 97 97 97 ASP ASP A . n A 1 98 LYS 98 98 98 LYS LYS A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 THR 100 100 100 THR THR A . n A 1 101 VAL 101 101 101 VAL VAL A . n A 1 102 MET 102 102 102 MET MET A . n A 1 103 THR 103 103 103 THR THR A . n A 1 104 TYR 104 104 104 TYR TYR A . n A 1 105 LEU 105 105 105 LEU LEU A . n A 1 106 TYR 106 106 106 TYR TYR A . n A 1 107 GLN 107 107 107 GLN GLN A . n A 1 108 ILE 108 108 108 ILE ILE A . n A 1 109 ARG 109 109 109 ARG ARG A . n A 1 110 ALA 110 110 110 ALA ALA A . n A 1 111 HIS 111 111 111 HIS HIS A . n A 1 112 PHE 112 112 112 PHE PHE A . n A 1 113 SER 113 113 113 SER SER A . n A 1 114 SER 114 114 114 SER SER A . n A 1 115 GLY 115 115 115 GLY GLY A . n A 1 116 PRO 116 116 116 PRO PRO A . n A 1 117 SER 117 117 117 SER SER A . n A 1 118 SER 118 118 118 SER SER A . n A 1 119 GLY 119 119 119 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-06-02 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 15 ? ? -37.57 -30.51 2 1 ASN A 24 ? ? -102.28 46.13 3 1 ILE A 30 ? ? -64.96 73.38 4 1 THR A 34 ? ? -107.32 -60.81 5 1 SER A 36 ? ? -37.34 -31.91 6 1 PRO A 62 ? ? -69.75 3.26 7 1 ALA A 94 ? ? -96.43 -66.75 8 1 PRO A 96 ? ? -69.76 -178.53 9 1 SER A 114 ? ? -42.37 153.04 10 2 PRO A 8 ? ? -69.76 93.05 11 2 ALA A 10 ? ? -49.33 93.54 12 2 SER A 11 ? ? 39.07 42.97 13 2 ASN A 24 ? ? -105.93 47.37 14 2 ILE A 30 ? ? -68.84 74.35 15 2 THR A 34 ? ? -124.70 -71.63 16 2 PRO A 62 ? ? -69.79 3.28 17 2 TYR A 73 ? ? -38.22 -29.06 18 2 SER A 82 ? ? -37.38 135.83 19 2 ASP A 97 ? ? -69.35 99.93 20 2 THR A 100 ? ? -58.60 -72.42 21 2 SER A 118 ? ? -79.02 48.48 22 3 THR A 34 ? ? -117.44 -73.31 23 3 PRO A 52 ? ? -69.79 3.53 24 3 PRO A 62 ? ? -69.86 2.97 25 3 ALA A 94 ? ? -96.42 -65.42 26 3 TYR A 106 ? ? -38.43 -37.26 27 4 THR A 34 ? ? -131.59 -67.08 28 4 SER A 36 ? ? -38.89 -27.72 29 4 PRO A 52 ? ? -69.77 2.97 30 4 PRO A 62 ? ? -69.75 3.29 31 4 ALA A 72 ? ? -48.48 -71.60 32 4 PRO A 96 ? ? -69.76 -170.18 33 5 ALA A 10 ? ? -174.32 127.56 34 5 ASN A 24 ? ? -114.48 56.89 35 5 THR A 34 ? ? -126.76 -70.72 36 5 PRO A 52 ? ? -69.77 3.29 37 5 PRO A 62 ? ? -69.75 3.39 38 5 TYR A 73 ? ? -37.83 -28.52 39 5 THR A 100 ? ? -59.32 -73.09 40 5 SER A 114 ? ? -39.70 129.04 41 5 PRO A 116 ? ? -69.78 90.73 42 6 SER A 2 ? ? -130.67 -55.18 43 6 ASN A 9 ? ? -41.79 -74.82 44 6 ASN A 24 ? ? -102.74 42.55 45 6 ILE A 30 ? ? -118.57 56.74 46 6 THR A 34 ? ? -134.50 -69.08 47 6 PRO A 52 ? ? -69.77 0.58 48 6 PRO A 62 ? ? -69.74 3.83 49 6 TYR A 73 ? ? -37.85 -39.06 50 6 SER A 82 ? ? -47.94 107.00 51 6 LEU A 84 ? ? -131.48 -49.44 52 6 MET A 90 ? ? -49.00 -19.57 53 6 ALA A 94 ? ? -90.57 -66.35 54 6 PRO A 96 ? ? -69.80 -171.14 55 6 LYS A 98 ? ? -38.19 -39.59 56 7 PRO A 8 ? ? -69.72 2.87 57 7 GLN A 12 ? ? -35.79 -38.55 58 7 PHE A 33 ? ? -105.41 40.57 59 7 THR A 34 ? ? -133.33 -74.41 60 7 PRO A 52 ? ? -69.77 3.18 61 7 PRO A 62 ? ? -69.81 3.50 62 7 ILE A 81 ? ? -52.44 98.72 63 7 SER A 82 ? ? -48.50 177.65 64 7 ARG A 83 ? ? -106.79 76.27 65 8 ALA A 10 ? ? -45.92 158.20 66 8 SER A 11 ? ? -39.64 -35.17 67 8 LEU A 15 ? ? -37.42 -39.62 68 8 THR A 34 ? ? -127.78 -62.01 69 8 PRO A 52 ? ? -69.77 3.42 70 8 PRO A 62 ? ? -69.75 2.95 71 8 TYR A 73 ? ? -36.47 -38.17 72 8 ILE A 81 ? ? -61.10 91.09 73 8 PRO A 116 ? ? -69.75 93.42 74 9 ASN A 24 ? ? 75.00 34.02 75 9 ILE A 30 ? ? -61.27 77.10 76 9 THR A 34 ? ? -128.31 -62.69 77 9 ALA A 45 ? ? -35.01 -34.16 78 9 PRO A 52 ? ? -69.70 3.36 79 9 PRO A 62 ? ? -69.82 7.63 80 9 ALA A 72 ? ? -56.65 -70.73 81 9 ALA A 94 ? ? -74.49 -72.73 82 9 SER A 118 ? ? -67.75 81.38 83 10 SER A 2 ? ? 36.86 42.91 84 10 SER A 5 ? ? -96.94 46.20 85 10 ASN A 9 ? ? -50.89 87.09 86 10 ALA A 10 ? ? -172.78 143.10 87 10 LEU A 15 ? ? -39.78 -26.12 88 10 THR A 34 ? ? -131.64 -72.38 89 10 SER A 36 ? ? -39.73 -25.62 90 10 PRO A 62 ? ? -69.72 3.40 91 10 TYR A 73 ? ? -38.13 -28.33 92 10 LEU A 99 ? ? -46.49 -75.51 93 10 SER A 117 ? ? -39.17 156.18 94 11 SER A 2 ? ? -175.02 113.66 95 11 PRO A 8 ? ? -69.77 2.91 96 11 ALA A 10 ? ? -174.56 118.47 97 11 LEU A 15 ? ? -37.21 -35.79 98 11 ASN A 24 ? ? -94.62 45.54 99 11 LYS A 29 ? ? -132.67 -34.34 100 11 THR A 34 ? ? -130.66 -70.15 101 11 PRO A 62 ? ? -69.82 4.14 102 11 ALA A 72 ? ? -61.47 -71.67 103 12 ALA A 10 ? ? -51.78 177.01 104 12 ASN A 24 ? ? -92.39 36.47 105 12 THR A 34 ? ? -127.84 -72.08 106 12 SER A 36 ? ? -36.42 -34.89 107 12 PRO A 62 ? ? -69.72 3.93 108 12 ALA A 72 ? ? -44.47 -73.21 109 12 PRO A 96 ? ? -69.74 -179.24 110 13 SER A 11 ? ? -98.68 -74.94 111 13 GLN A 12 ? ? -38.68 -30.19 112 13 THR A 34 ? ? -128.70 -72.01 113 13 SER A 36 ? ? -38.23 -34.55 114 13 PRO A 52 ? ? -69.79 1.93 115 13 PRO A 62 ? ? -69.79 4.19 116 13 SER A 82 ? ? -46.53 151.58 117 14 ASN A 24 ? ? -113.79 68.33 118 14 ARG A 26 ? ? -55.63 104.54 119 14 THR A 34 ? ? -131.71 -72.10 120 14 PRO A 52 ? ? -69.76 3.07 121 14 PRO A 62 ? ? -69.74 4.90 122 14 SER A 82 ? ? -42.58 157.42 123 14 PRO A 96 ? ? -69.70 -176.44 124 14 PRO A 116 ? ? -69.80 -172.80 125 15 ALA A 10 ? ? -45.86 165.09 126 15 ARG A 26 ? ? -39.65 -74.24 127 15 THR A 34 ? ? -127.35 -68.76 128 15 PRO A 62 ? ? -69.80 3.95 129 15 ALA A 72 ? ? -46.24 -72.35 130 15 ALA A 94 ? ? -90.72 -61.53 131 15 PRO A 96 ? ? -69.82 -178.62 132 15 TYR A 106 ? ? -36.18 -39.25 133 16 ASN A 9 ? ? -34.48 95.97 134 16 ILE A 30 ? ? -69.60 79.81 135 16 THR A 34 ? ? -126.90 -56.14 136 16 SER A 36 ? ? -37.42 -32.51 137 16 PRO A 62 ? ? -69.79 4.51 138 16 TYR A 73 ? ? -34.95 -39.47 139 16 SER A 82 ? ? -44.45 109.74 140 16 LEU A 84 ? ? -122.46 -52.25 141 16 PRO A 96 ? ? -69.71 -172.44 142 16 TYR A 106 ? ? -34.73 -39.62 143 16 PRO A 116 ? ? -69.74 2.31 144 16 SER A 117 ? ? -34.49 102.35 145 17 PRO A 8 ? ? -69.74 -170.66 146 17 ALA A 10 ? ? -171.00 122.83 147 17 GLU A 20 ? ? -55.97 -70.23 148 17 ASN A 24 ? ? -118.13 50.17 149 17 SER A 36 ? ? -38.33 -27.56 150 17 PRO A 52 ? ? -69.74 2.37 151 17 PRO A 62 ? ? -69.69 3.32 152 17 ALA A 72 ? ? -55.48 -74.02 153 17 ALA A 94 ? ? -92.84 -68.02 154 18 ALA A 10 ? ? -47.72 176.49 155 18 ILE A 30 ? ? -60.49 75.72 156 18 SER A 36 ? ? -37.96 -31.24 157 18 PRO A 52 ? ? -69.76 4.07 158 18 PRO A 62 ? ? -69.76 3.42 159 18 SER A 82 ? ? -38.81 139.11 160 18 THR A 100 ? ? -51.49 -71.09 161 19 SER A 6 ? ? -66.30 96.04 162 19 PRO A 8 ? ? -69.73 2.53 163 19 ASN A 9 ? ? -54.90 82.97 164 19 CYS A 18 ? ? -64.72 -71.30 165 19 LYS A 19 ? ? -38.81 -31.57 166 19 ASN A 24 ? ? -107.44 43.03 167 19 ILE A 30 ? ? -60.16 76.76 168 19 THR A 34 ? ? -127.40 -62.61 169 19 LEU A 41 ? ? -73.81 -71.30 170 19 PRO A 52 ? ? -69.72 3.04 171 19 PRO A 62 ? ? -69.74 3.48 172 19 ALA A 72 ? ? -57.04 -70.24 173 19 PRO A 96 ? ? -69.77 -164.63 174 19 THR A 100 ? ? -57.73 -70.86 175 19 TYR A 106 ? ? -37.54 -32.79 176 19 PRO A 116 ? ? -69.77 91.44 177 19 SER A 118 ? ? -37.29 150.53 178 20 ASN A 24 ? ? -94.41 44.37 179 20 PHE A 33 ? ? -80.37 39.83 180 20 THR A 34 ? ? -128.84 -68.61 181 20 PRO A 52 ? ? -69.78 0.60 182 20 PRO A 62 ? ? -69.85 3.17 183 20 TYR A 73 ? ? -39.09 -35.99 184 20 ILE A 81 ? ? -57.37 90.87 185 20 SER A 82 ? ? -47.04 171.14 186 20 TYR A 106 ? ? -36.84 -34.07 #