HEADER ISOMERASE 09-DEC-05 2D9F TITLE SOLUTION STRUCTURE OF RUH-047, AN FKBP DOMAIN FROM HUMAN CDNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: FK506-BINDING PROTEIN 8 VARIANT; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 8-129; COMPND 5 SYNONYM: FK506-BINDING DOMAIN, FKBP; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 6 EXPRESSION_SYSTEM_PLASMID: P040614-07; SOURCE 7 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS FKBP, FK506 BINDING PROTEIN, RAPAMYCIN, STRUCTURAL GENOMICS, NPPSFA, KEYWDS 2 NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, KEYWDS 3 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, ISOMERASE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.Z.M.RUHUL MOMEN,H.HIROTA,S.KOSHIBA,T.KIGAWA,S.YOKOYAMA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 09-MAR-22 2D9F 1 REMARK SEQADV REVDAT 2 24-FEB-09 2D9F 1 VERSN REVDAT 1 09-JUN-06 2D9F 0 JRNL AUTH A.Z.M.RUHUL MOMEN,H.HIROTA,S.KOSHIBA,T.KIGAWA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF RUH-047, AN FKBP DOMAIN FROM HUMAN JRNL TITL 2 CDNA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.6, CYANA 2.0.17 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUNTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2D9F COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-DEC-05. REMARK 100 THE DEPOSITION ID IS D_1000025150. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM NACL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.01MM DOMAIN U-15N, 13C; 20MM D REMARK 210 -TRIS-HCL (PH7.0); 100MM NACL; REMARK 210 1MM D-DTT; 0.02% NAN3; 90%H2O, REMARK 210 10%D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20031121, NMRVIEW 5.04, REMARK 210 KUJIRA 0.9295 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION,STRUCTURES WITH REMARK 210 THE LOWEST ENERGY,STRUCTURES REMARK 210 WITH THE LEAST RESTRAINT REMARK 210 VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 TRP A 10 161.20 -40.68 REMARK 500 1 LEU A 18 -71.02 -60.08 REMARK 500 1 PRO A 34 -170.09 -69.76 REMARK 500 1 GLU A 59 73.51 -112.39 REMARK 500 1 PRO A 78 2.95 -69.76 REMARK 500 1 CYS A 95 -71.22 -77.19 REMARK 500 1 PRO A 98 2.81 -69.78 REMARK 500 1 ARG A 102 -69.79 -107.14 REMARK 500 1 HIS A 109 26.40 48.43 REMARK 500 1 ALA A 111 159.44 -46.56 REMARK 500 1 LYS A 119 -61.03 -93.74 REMARK 500 1 MET A 129 51.71 34.76 REMARK 500 2 GLU A 8 40.30 -107.61 REMARK 500 2 ARG A 33 139.84 -37.78 REMARK 500 2 PRO A 34 -170.20 -69.75 REMARK 500 2 PRO A 78 3.13 -69.78 REMARK 500 2 ARG A 102 -65.01 -105.59 REMARK 500 2 HIS A 109 27.49 43.52 REMARK 500 2 ALA A 111 160.50 -48.39 REMARK 500 2 SER A 130 173.40 -53.34 REMARK 500 3 SER A 2 107.06 -41.76 REMARK 500 3 LEU A 18 -70.27 -62.00 REMARK 500 3 SER A 32 136.27 -171.71 REMARK 500 3 ARG A 33 137.42 -39.22 REMARK 500 3 PRO A 34 -164.04 -69.73 REMARK 500 3 GLU A 59 74.06 -110.17 REMARK 500 3 PRO A 78 4.28 -69.76 REMARK 500 3 SER A 92 -36.38 -36.71 REMARK 500 3 CYS A 95 -72.54 -78.82 REMARK 500 3 SER A 103 105.38 -160.13 REMARK 500 3 HIS A 109 25.24 45.45 REMARK 500 3 ALA A 111 159.09 -46.66 REMARK 500 3 GLU A 128 77.50 -65.29 REMARK 500 4 LEU A 18 -70.16 -64.79 REMARK 500 4 SER A 31 170.19 -57.88 REMARK 500 4 PRO A 34 -172.89 -69.80 REMARK 500 4 PRO A 78 4.90 -69.79 REMARK 500 4 CYS A 95 -73.42 -78.94 REMARK 500 4 PRO A 98 2.77 -69.73 REMARK 500 4 ARG A 102 -65.02 -105.79 REMARK 500 4 ALA A 111 160.34 -43.06 REMARK 500 4 LEU A 127 96.18 -57.46 REMARK 500 4 SER A 133 163.13 -43.52 REMARK 500 5 SER A 2 165.79 -48.79 REMARK 500 5 GLU A 8 31.83 -93.73 REMARK 500 5 SER A 31 170.91 -52.40 REMARK 500 5 PRO A 34 -165.17 -69.75 REMARK 500 5 PRO A 78 3.25 -69.76 REMARK 500 5 CYS A 95 -71.42 -74.46 REMARK 500 5 PRO A 98 1.33 -69.80 REMARK 500 REMARK 500 THIS ENTRY HAS 207 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSS001001573.1 RELATED DB: TARGETDB DBREF 2D9F A 8 129 GB 62897235 BAD96558 50 171 SEQADV 2D9F GLY A 1 GB 62897235 CLONING ARTIFACT SEQADV 2D9F SER A 2 GB 62897235 CLONING ARTIFACT SEQADV 2D9F SER A 3 GB 62897235 CLONING ARTIFACT SEQADV 2D9F GLY A 4 GB 62897235 CLONING ARTIFACT SEQADV 2D9F SER A 5 GB 62897235 CLONING ARTIFACT SEQADV 2D9F SER A 6 GB 62897235 CLONING ARTIFACT SEQADV 2D9F GLY A 7 GB 62897235 CLONING ARTIFACT SEQADV 2D9F SER A 130 GB 62897235 CLONING ARTIFACT SEQADV 2D9F GLY A 131 GB 62897235 CLONING ARTIFACT SEQADV 2D9F PRO A 132 GB 62897235 CLONING ARTIFACT SEQADV 2D9F SER A 133 GB 62897235 CLONING ARTIFACT SEQADV 2D9F SER A 134 GB 62897235 CLONING ARTIFACT SEQADV 2D9F GLY A 135 GB 62897235 CLONING ARTIFACT SEQRES 1 A 135 GLY SER SER GLY SER SER GLY GLU GLU TRP LEU ASP ILE SEQRES 2 A 135 LEU GLY ASN GLY LEU LEU ARG LYS LYS THR LEU VAL PRO SEQRES 3 A 135 GLY PRO PRO GLY SER SER ARG PRO VAL LYS GLY GLN VAL SEQRES 4 A 135 VAL THR VAL HIS LEU GLN THR SER LEU GLU ASN GLY THR SEQRES 5 A 135 ARG VAL GLN GLU GLU PRO GLU LEU VAL PHE THR LEU GLY SEQRES 6 A 135 ASP CYS ASP VAL ILE GLN ALA LEU ASP LEU SER VAL PRO SEQRES 7 A 135 LEU MET ASP VAL GLY GLU THR ALA MET VAL THR ALA ASP SEQRES 8 A 135 SER LYS TYR CYS TYR GLY PRO GLN GLY SER ARG SER PRO SEQRES 9 A 135 TYR ILE PRO PRO HIS ALA ALA LEU CYS LEU GLU VAL THR SEQRES 10 A 135 LEU LYS THR ALA VAL ASP ARG PRO ASP LEU GLU MET SER SEQRES 11 A 135 GLY PRO SER SER GLY HELIX 1 1 SER A 76 MET A 80 5 5 HELIX 2 2 ASP A 91 TYR A 96 1 6 SHEET 1 A 6 LEU A 11 ASP A 12 0 SHEET 2 A 6 ARG A 20 VAL A 25 -1 O LYS A 21 N LEU A 11 SHEET 3 A 6 THR A 85 ALA A 90 -1 O MET A 87 N LYS A 22 SHEET 4 A 6 LEU A 112 VAL A 122 -1 O LEU A 114 N VAL A 88 SHEET 5 A 6 VAL A 39 LEU A 48 -1 N SER A 47 O CYS A 113 SHEET 6 A 6 ARG A 53 THR A 63 -1 O LEU A 60 N VAL A 42 CISPEP 1 SER A 103 PRO A 104 1 -0.01 CISPEP 2 SER A 103 PRO A 104 2 0.01 CISPEP 3 SER A 103 PRO A 104 3 -0.06 CISPEP 4 SER A 103 PRO A 104 4 -0.03 CISPEP 5 SER A 103 PRO A 104 5 -0.04 CISPEP 6 SER A 103 PRO A 104 6 0.00 CISPEP 7 SER A 103 PRO A 104 7 -0.12 CISPEP 8 SER A 103 PRO A 104 8 -0.04 CISPEP 9 SER A 103 PRO A 104 9 -0.10 CISPEP 10 SER A 103 PRO A 104 10 0.03 CISPEP 11 SER A 103 PRO A 104 11 -0.05 CISPEP 12 SER A 103 PRO A 104 12 0.04 CISPEP 13 SER A 103 PRO A 104 13 -0.03 CISPEP 14 SER A 103 PRO A 104 14 -0.06 CISPEP 15 SER A 103 PRO A 104 15 -0.04 CISPEP 16 SER A 103 PRO A 104 16 -0.06 CISPEP 17 SER A 103 PRO A 104 17 -0.01 CISPEP 18 SER A 103 PRO A 104 18 0.05 CISPEP 19 SER A 103 PRO A 104 19 -0.02 CISPEP 20 SER A 103 PRO A 104 20 -0.08 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1