data_2DB8 # _entry.id 2DB8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2DB8 pdb_00002db8 10.2210/pdb2db8/pdb RCSB RCSB025209 ? ? WWPDB D_1000025209 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsi002012704.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2DB8 _pdbx_database_status.recvd_initial_deposition_date 2005-12-15 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sato, M.' 1 'Koshiba, S.' 2 'Inoue, M.' 3 'Kigawa, T.' 4 'Yokoyama, S.' 5 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 6 # _citation.id primary _citation.title 'Solution structures of the fn3 domain of human Tripartite motif protein 9' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sato, M.' 1 ? primary 'Koshiba, S.' 2 ? primary 'Inoue, M.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Yokoyama, S.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Tripartite motif protein 9, isoform 2' _entity.formula_weight 11549.704 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'Fibronectin type III domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Tripartite motif protein 9' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGPVPATPILQLEECCTHNNSATLSWKQPPLSTVPADGYILELDDGNGGQFREVYVGKETMCTVDGLHFNSTYNA RVKAFNKTGVSPYSKTLVLQTSEGSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGPVPATPILQLEECCTHNNSATLSWKQPPLSTVPADGYILELDDGNGGQFREVYVGKETMCTVDGLHFNSTYNA RVKAFNKTGVSPYSKTLVLQTSEGSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsi002012704.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 PRO n 1 9 VAL n 1 10 PRO n 1 11 ALA n 1 12 THR n 1 13 PRO n 1 14 ILE n 1 15 LEU n 1 16 GLN n 1 17 LEU n 1 18 GLU n 1 19 GLU n 1 20 CYS n 1 21 CYS n 1 22 THR n 1 23 HIS n 1 24 ASN n 1 25 ASN n 1 26 SER n 1 27 ALA n 1 28 THR n 1 29 LEU n 1 30 SER n 1 31 TRP n 1 32 LYS n 1 33 GLN n 1 34 PRO n 1 35 PRO n 1 36 LEU n 1 37 SER n 1 38 THR n 1 39 VAL n 1 40 PRO n 1 41 ALA n 1 42 ASP n 1 43 GLY n 1 44 TYR n 1 45 ILE n 1 46 LEU n 1 47 GLU n 1 48 LEU n 1 49 ASP n 1 50 ASP n 1 51 GLY n 1 52 ASN n 1 53 GLY n 1 54 GLY n 1 55 GLN n 1 56 PHE n 1 57 ARG n 1 58 GLU n 1 59 VAL n 1 60 TYR n 1 61 VAL n 1 62 GLY n 1 63 LYS n 1 64 GLU n 1 65 THR n 1 66 MET n 1 67 CYS n 1 68 THR n 1 69 VAL n 1 70 ASP n 1 71 GLY n 1 72 LEU n 1 73 HIS n 1 74 PHE n 1 75 ASN n 1 76 SER n 1 77 THR n 1 78 TYR n 1 79 ASN n 1 80 ALA n 1 81 ARG n 1 82 VAL n 1 83 LYS n 1 84 ALA n 1 85 PHE n 1 86 ASN n 1 87 LYS n 1 88 THR n 1 89 GLY n 1 90 VAL n 1 91 SER n 1 92 PRO n 1 93 TYR n 1 94 SER n 1 95 LYS n 1 96 THR n 1 97 LEU n 1 98 VAL n 1 99 LEU n 1 100 GLN n 1 101 THR n 1 102 SER n 1 103 GLU n 1 104 GLY n 1 105 SER n 1 106 GLY n 1 107 PRO n 1 108 SER n 1 109 SER n 1 110 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene TRIM9 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Cell free synthesis' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P040921-16 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TRIM9_HUMAN _struct_ref.pdbx_db_accession Q9C026 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 437 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2DB8 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 104 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9C026 _struct_ref_seq.db_align_beg 437 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 534 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 104 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2DB8 GLY A 1 ? UNP Q9C026 ? ? 'cloning artifact' 1 1 1 2DB8 SER A 2 ? UNP Q9C026 ? ? 'cloning artifact' 2 2 1 2DB8 SER A 3 ? UNP Q9C026 ? ? 'cloning artifact' 3 3 1 2DB8 GLY A 4 ? UNP Q9C026 ? ? 'cloning artifact' 4 4 1 2DB8 SER A 5 ? UNP Q9C026 ? ? 'cloning artifact' 5 5 1 2DB8 SER A 6 ? UNP Q9C026 ? ? 'cloning artifact' 6 6 1 2DB8 GLY A 7 ? UNP Q9C026 ? ? 'cloning artifact' 7 7 1 2DB8 SER A 105 ? UNP Q9C026 ? ? 'cloning artifact' 105 8 1 2DB8 GLY A 106 ? UNP Q9C026 ? ? 'cloning artifact' 106 9 1 2DB8 PRO A 107 ? UNP Q9C026 ? ? 'cloning artifact' 107 10 1 2DB8 SER A 108 ? UNP Q9C026 ? ? 'cloning artifact' 108 11 1 2DB8 SER A 109 ? UNP Q9C026 ? ? 'cloning artifact' 109 12 1 2DB8 GLY A 110 ? UNP Q9C026 ? ? 'cloning artifact' 110 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_13C-separated_NOESY 1 2 1 3D_15N-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 296 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents ;1mM fn3 domain U-15N,13C; 20mM d-Tris HCl; 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O ; _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2DB8 _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2DB8 _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function, structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2DB8 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 2.6 Bruker 1 processing NMRPipe 20031121 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.932 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 2DB8 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2DB8 _struct.title 'Solution structures of the fn3 domain of human Tripartite motif protein 9' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2DB8 _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text ;RING finger protein 91, TRIM9, KIAA0282, RNF91, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, PROTEIN BINDING ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 26 ? LEU A 29 ? SER A 26 LEU A 29 A 2 CYS A 67 ? ASP A 70 ? CYS A 67 ASP A 70 B 1 ARG A 57 ? GLY A 62 ? ARG A 57 GLY A 62 B 2 GLY A 43 ? LEU A 48 ? GLY A 43 LEU A 48 B 3 ASN A 79 ? PHE A 85 ? ASN A 79 PHE A 85 B 4 LEU A 97 ? VAL A 98 ? LEU A 97 VAL A 98 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 29 ? N LEU A 29 O CYS A 67 ? O CYS A 67 B 1 2 O TYR A 60 ? O TYR A 60 N LEU A 46 ? N LEU A 46 B 2 3 N GLY A 43 ? N GLY A 43 O PHE A 85 ? O PHE A 85 B 3 4 N ALA A 80 ? N ALA A 80 O LEU A 97 ? O LEU A 97 # _database_PDB_matrix.entry_id 2DB8 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2DB8 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 PRO 8 8 8 PRO PRO A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 PRO 13 13 13 PRO PRO A . n A 1 14 ILE 14 14 14 ILE ILE A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 GLN 16 16 16 GLN GLN A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 CYS 20 20 20 CYS CYS A . n A 1 21 CYS 21 21 21 CYS CYS A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 HIS 23 23 23 HIS HIS A . n A 1 24 ASN 24 24 24 ASN ASN A . n A 1 25 ASN 25 25 25 ASN ASN A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 TRP 31 31 31 TRP TRP A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 GLN 33 33 33 GLN GLN A . n A 1 34 PRO 34 34 34 PRO PRO A . n A 1 35 PRO 35 35 35 PRO PRO A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 SER 37 37 37 SER SER A . n A 1 38 THR 38 38 38 THR THR A . n A 1 39 VAL 39 39 39 VAL VAL A . n A 1 40 PRO 40 40 40 PRO PRO A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 ASP 42 42 42 ASP ASP A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 TYR 44 44 44 TYR TYR A . n A 1 45 ILE 45 45 45 ILE ILE A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 GLU 47 47 47 GLU GLU A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 ASP 49 49 49 ASP ASP A . n A 1 50 ASP 50 50 50 ASP ASP A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 ASN 52 52 52 ASN ASN A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 GLY 54 54 54 GLY GLY A . n A 1 55 GLN 55 55 55 GLN GLN A . n A 1 56 PHE 56 56 56 PHE PHE A . n A 1 57 ARG 57 57 57 ARG ARG A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 TYR 60 60 60 TYR TYR A . n A 1 61 VAL 61 61 61 VAL VAL A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 THR 65 65 65 THR THR A . n A 1 66 MET 66 66 66 MET MET A . n A 1 67 CYS 67 67 67 CYS CYS A . n A 1 68 THR 68 68 68 THR THR A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 ASP 70 70 70 ASP ASP A . n A 1 71 GLY 71 71 71 GLY GLY A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 HIS 73 73 73 HIS HIS A . n A 1 74 PHE 74 74 74 PHE PHE A . n A 1 75 ASN 75 75 75 ASN ASN A . n A 1 76 SER 76 76 76 SER SER A . n A 1 77 THR 77 77 77 THR THR A . n A 1 78 TYR 78 78 78 TYR TYR A . n A 1 79 ASN 79 79 79 ASN ASN A . n A 1 80 ALA 80 80 80 ALA ALA A . n A 1 81 ARG 81 81 81 ARG ARG A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 PHE 85 85 85 PHE PHE A . n A 1 86 ASN 86 86 86 ASN ASN A . n A 1 87 LYS 87 87 87 LYS LYS A . n A 1 88 THR 88 88 88 THR THR A . n A 1 89 GLY 89 89 89 GLY GLY A . n A 1 90 VAL 90 90 90 VAL VAL A . n A 1 91 SER 91 91 91 SER SER A . n A 1 92 PRO 92 92 92 PRO PRO A . n A 1 93 TYR 93 93 93 TYR TYR A . n A 1 94 SER 94 94 94 SER SER A . n A 1 95 LYS 95 95 95 LYS LYS A . n A 1 96 THR 96 96 96 THR THR A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 VAL 98 98 98 VAL VAL A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 GLN 100 100 100 GLN GLN A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 SER 102 102 102 SER SER A . n A 1 103 GLU 103 103 103 GLU GLU A . n A 1 104 GLY 104 104 104 GLY GLY A . n A 1 105 SER 105 105 105 SER SER A . n A 1 106 GLY 106 106 106 GLY GLY A . n A 1 107 PRO 107 107 107 PRO PRO A . n A 1 108 SER 108 108 108 SER SER A . n A 1 109 SER 109 109 109 SER SER A . n A 1 110 GLY 110 110 110 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-06-15 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 16 ? ? -109.64 47.84 2 1 LEU A 17 ? ? -38.59 124.91 3 1 CYS A 20 ? ? -130.21 -46.66 4 1 ASN A 25 ? ? -110.34 58.31 5 1 TRP A 31 ? ? -60.44 -177.68 6 1 SER A 37 ? ? -56.96 103.81 7 1 ASP A 50 ? ? -86.92 40.38 8 1 MET A 66 ? ? -166.15 115.44 9 1 ASN A 75 ? ? 34.57 44.27 10 1 THR A 88 ? ? -52.26 -72.51 11 1 THR A 96 ? ? -34.03 113.94 12 1 SER A 108 ? ? -131.84 -59.87 13 2 SER A 6 ? ? -101.46 50.46 14 2 PRO A 8 ? ? -69.74 -174.69 15 2 GLU A 18 ? ? -102.20 -66.59 16 2 GLU A 19 ? ? -46.84 107.10 17 2 ASN A 25 ? ? -108.46 41.42 18 2 TRP A 31 ? ? -48.33 175.54 19 2 PRO A 35 ? ? -69.74 0.62 20 2 ASP A 50 ? ? -89.47 39.37 21 2 ASN A 75 ? ? 38.69 44.86 22 2 THR A 88 ? ? -44.78 -71.37 23 2 SER A 94 ? ? -64.94 -177.36 24 2 THR A 96 ? ? -35.69 118.15 25 3 LEU A 15 ? ? -54.18 90.59 26 3 GLN A 16 ? ? -119.96 54.33 27 3 LEU A 17 ? ? -47.82 167.72 28 3 GLU A 19 ? ? -37.71 106.21 29 3 CYS A 20 ? ? -104.75 -63.43 30 3 HIS A 23 ? ? -131.19 -47.82 31 3 ASP A 50 ? ? -86.06 35.34 32 3 LYS A 63 ? ? -117.08 52.96 33 3 THR A 96 ? ? -35.87 125.73 34 3 LEU A 99 ? ? -113.05 77.01 35 3 SER A 108 ? ? -59.31 94.36 36 3 SER A 109 ? ? -49.73 165.20 37 4 ALA A 11 ? ? -35.43 130.29 38 4 GLN A 16 ? ? -111.57 75.87 39 4 CYS A 21 ? ? -170.98 112.84 40 4 ASN A 24 ? ? -61.47 -71.12 41 4 ASP A 50 ? ? -81.30 44.47 42 4 ASN A 75 ? ? 38.01 52.60 43 4 LYS A 95 ? ? -35.70 103.93 44 4 THR A 96 ? ? -34.66 114.88 45 4 THR A 101 ? ? -37.51 154.21 46 5 CYS A 20 ? ? -122.85 -55.58 47 5 ASN A 25 ? ? -94.81 49.09 48 5 SER A 30 ? ? -113.55 58.12 49 5 TRP A 31 ? ? -46.81 155.03 50 5 ASP A 50 ? ? -82.36 44.28 51 5 ASN A 75 ? ? 35.04 47.11 52 5 SER A 94 ? ? -57.70 -178.95 53 5 LEU A 99 ? ? -102.80 72.41 54 5 GLN A 100 ? ? -59.81 107.51 55 6 PRO A 8 ? ? -69.78 -174.03 56 6 PRO A 13 ? ? -69.74 -179.37 57 6 LEU A 17 ? ? -58.51 101.62 58 6 GLU A 19 ? ? -36.55 128.07 59 6 ASP A 50 ? ? -84.74 33.52 60 6 ARG A 81 ? ? -166.69 116.60 61 6 LYS A 87 ? ? -39.79 -39.62 62 6 THR A 88 ? ? -52.54 -72.66 63 6 GLN A 100 ? ? -38.48 122.66 64 6 SER A 105 ? ? -166.77 110.58 65 6 PRO A 107 ? ? -69.76 96.25 66 7 PRO A 8 ? ? -69.74 -171.05 67 7 LEU A 17 ? ? -43.92 152.73 68 7 GLU A 19 ? ? -35.33 102.62 69 7 THR A 22 ? ? -35.67 132.91 70 7 HIS A 23 ? ? -50.10 170.18 71 7 TRP A 31 ? ? -55.08 -174.64 72 7 ASP A 50 ? ? -87.95 40.95 73 7 THR A 88 ? ? -44.76 -74.94 74 7 LEU A 99 ? ? -106.21 56.70 75 8 SER A 6 ? ? -75.60 -75.09 76 8 PRO A 8 ? ? -69.76 -176.42 77 8 LEU A 15 ? ? -57.61 93.74 78 8 LEU A 17 ? ? -57.54 -178.97 79 8 GLU A 19 ? ? -41.84 152.34 80 8 CYS A 21 ? ? -87.96 45.52 81 8 SER A 37 ? ? -40.58 97.84 82 8 ASP A 50 ? ? -97.59 43.53 83 8 ASN A 75 ? ? 72.40 31.55 84 8 THR A 88 ? ? -49.15 -73.63 85 8 THR A 96 ? ? -34.07 113.27 86 9 VAL A 9 ? ? -42.76 153.77 87 9 GLU A 18 ? ? -128.55 -62.96 88 9 CYS A 21 ? ? -78.64 46.79 89 9 ASN A 25 ? ? -86.02 41.62 90 9 SER A 30 ? ? -118.00 52.44 91 9 TRP A 31 ? ? -40.38 159.93 92 9 ASP A 50 ? ? -87.29 40.67 93 9 ASN A 75 ? ? 36.91 38.10 94 9 THR A 88 ? ? -52.41 -70.93 95 9 LEU A 99 ? ? -109.05 74.38 96 9 GLN A 100 ? ? -57.26 108.04 97 10 VAL A 9 ? ? -49.77 155.26 98 10 ALA A 11 ? ? -36.29 138.70 99 10 LEU A 15 ? ? -64.88 91.99 100 10 GLN A 16 ? ? -107.57 56.94 101 10 SER A 30 ? ? -118.94 57.58 102 10 TRP A 31 ? ? -46.56 172.65 103 10 ASP A 50 ? ? -92.70 43.32 104 10 ASN A 75 ? ? 39.40 48.58 105 10 THR A 88 ? ? -46.07 -71.18 106 10 THR A 96 ? ? -34.05 111.03 107 10 PRO A 107 ? ? -69.78 2.66 108 10 SER A 108 ? ? 74.36 51.32 109 10 SER A 109 ? ? -167.59 110.97 110 11 PRO A 8 ? ? -69.74 -176.85 111 11 ASN A 25 ? ? -82.03 47.11 112 11 SER A 30 ? ? -112.86 71.88 113 11 ASP A 50 ? ? -87.93 36.77 114 11 HIS A 73 ? ? -58.14 172.87 115 11 THR A 88 ? ? -48.94 -74.41 116 11 THR A 96 ? ? -39.71 120.55 117 11 GLN A 100 ? ? -61.67 97.57 118 11 SER A 105 ? ? -51.80 98.17 119 12 VAL A 9 ? ? -49.69 153.43 120 12 GLU A 19 ? ? -42.55 101.59 121 12 THR A 22 ? ? -82.99 39.59 122 12 HIS A 23 ? ? -93.06 39.55 123 12 ASN A 25 ? ? -91.61 44.76 124 12 TRP A 31 ? ? -35.38 137.41 125 12 ASP A 50 ? ? -90.83 42.75 126 12 ARG A 81 ? ? -170.68 134.33 127 12 LEU A 99 ? ? -117.80 72.21 128 12 SER A 109 ? ? -86.86 42.23 129 13 SER A 2 ? ? -172.48 122.52 130 13 SER A 30 ? ? -109.67 67.15 131 13 LEU A 36 ? ? -97.93 33.24 132 13 ASP A 50 ? ? -89.19 39.25 133 13 LEU A 99 ? ? -111.21 64.15 134 14 SER A 2 ? ? -48.53 168.00 135 14 VAL A 9 ? ? -47.99 154.40 136 14 LEU A 17 ? ? -34.63 125.33 137 14 CYS A 21 ? ? 34.97 48.25 138 14 HIS A 23 ? ? -82.02 46.82 139 14 ASN A 25 ? ? -104.65 42.81 140 14 TRP A 31 ? ? -48.80 157.95 141 14 THR A 38 ? ? 34.85 33.95 142 14 ASP A 50 ? ? -95.23 40.58 143 14 MET A 66 ? ? -161.44 119.69 144 14 ARG A 81 ? ? -170.92 129.77 145 14 THR A 96 ? ? -65.53 94.65 146 14 LEU A 99 ? ? -106.23 74.72 147 15 CYS A 21 ? ? -44.85 105.00 148 15 ASP A 50 ? ? -86.59 34.08 149 15 ARG A 81 ? ? -170.93 123.11 150 15 THR A 96 ? ? -35.97 124.50 151 15 GLU A 103 ? ? -39.63 139.07 152 15 SER A 108 ? ? -54.92 103.20 153 16 SER A 2 ? ? -95.68 41.50 154 16 PRO A 8 ? ? -69.74 -170.98 155 16 ALA A 11 ? ? -38.39 125.06 156 16 LEU A 17 ? ? -46.28 89.40 157 16 GLU A 19 ? ? -37.60 110.33 158 16 HIS A 23 ? ? -34.96 115.23 159 16 ASN A 25 ? ? -48.55 -19.93 160 16 TRP A 31 ? ? -62.05 -177.64 161 16 SER A 37 ? ? -45.93 153.31 162 16 ASP A 50 ? ? -86.62 38.42 163 16 MET A 66 ? ? -169.09 116.92 164 16 THR A 88 ? ? -45.27 -70.28 165 16 SER A 94 ? ? -53.02 174.66 166 16 LYS A 95 ? ? -45.79 163.79 167 16 GLN A 100 ? ? -62.16 97.56 168 16 PRO A 107 ? ? -69.76 3.27 169 17 LEU A 17 ? ? -38.84 133.75 170 17 GLU A 19 ? ? -40.45 94.30 171 17 CYS A 21 ? ? -37.48 95.33 172 17 HIS A 23 ? ? -59.02 100.06 173 17 TRP A 31 ? ? -66.10 -175.13 174 17 ASP A 50 ? ? -89.94 37.26 175 17 ARG A 81 ? ? -170.27 129.77 176 17 LYS A 95 ? ? -36.61 111.33 177 17 THR A 96 ? ? -34.53 116.14 178 17 SER A 108 ? ? -49.26 109.91 179 18 SER A 6 ? ? -175.01 122.86 180 18 LEU A 15 ? ? -62.78 99.51 181 18 LEU A 17 ? ? -34.58 151.04 182 18 CYS A 21 ? ? -87.10 40.16 183 18 ASN A 25 ? ? -90.32 52.01 184 18 TRP A 31 ? ? -67.97 -176.02 185 18 THR A 38 ? ? -99.49 41.78 186 18 ASP A 50 ? ? -97.75 43.84 187 18 THR A 88 ? ? -46.50 -70.78 188 18 THR A 96 ? ? -52.81 107.35 189 18 SER A 108 ? ? 39.50 46.02 190 19 VAL A 9 ? ? -43.71 155.04 191 19 LEU A 17 ? ? -35.06 121.86 192 19 ASN A 25 ? ? -105.86 41.64 193 19 PRO A 35 ? ? -69.76 2.09 194 19 ASP A 50 ? ? -79.45 44.46 195 19 HIS A 73 ? ? -57.10 170.63 196 19 LEU A 99 ? ? -115.76 78.76 197 19 PRO A 107 ? ? -69.70 96.24 198 19 SER A 108 ? ? -58.69 107.05 199 20 SER A 5 ? ? -63.21 96.34 200 20 PRO A 8 ? ? -69.75 -167.38 201 20 LEU A 15 ? ? -55.03 98.65 202 20 GLN A 16 ? ? -113.76 54.26 203 20 THR A 22 ? ? -33.90 99.39 204 20 ASN A 24 ? ? -90.02 -74.87 205 20 PRO A 35 ? ? -69.78 2.84 206 20 ASP A 50 ? ? -81.15 43.18 207 20 ASN A 75 ? ? 37.35 47.06 208 20 LYS A 95 ? ? -39.43 136.03 209 20 THR A 96 ? ? -56.93 104.49 210 20 LEU A 99 ? ? -116.48 59.64 211 20 GLN A 100 ? ? -44.76 104.62 212 20 SER A 105 ? ? -82.55 41.66 213 20 PRO A 107 ? ? -69.78 0.34 #