data_2DER # _entry.id 2DER # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2DER pdb_00002der 10.2210/pdb2der/pdb NDB PR0192 ? ? RCSB RCSB025331 ? ? WWPDB D_1000025331 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2DET 'The same protein/tRNA complex in the pre-reaction state' unspecified PDB 2DEU 'The same protein/tRNA complex in the adenylated intermediate state' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2DER _pdbx_database_status.recvd_initial_deposition_date 2006-02-17 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Numata, T.' 1 ? 'Ikeuchi, Y.' 2 ? 'Fukai, S.' 3 ? 'Suzuki, T.' 4 ? 'Nureki, O.' 5 ? # _citation.id primary _citation.title 'Snapshots of tRNA sulphuration via an adenylated intermediate' _citation.journal_abbrev Nature _citation.journal_volume 442 _citation.page_first 419 _citation.page_last 424 _citation.year 2006 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16871210 _citation.pdbx_database_id_DOI 10.1038/nature04896 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Numata, T.' 1 ? primary 'Ikeuchi, Y.' 2 ? primary 'Fukai, S.' 3 ? primary 'Suzuki, T.' 4 ? primary 'Nureki, O.' 5 ? # _cell.entry_id 2DER _cell.length_a 225.389 _cell.length_b 175.845 _cell.length_c 52.965 _cell.angle_alpha 90.00 _cell.angle_beta 101.62 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2DER _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn tRNA 24378.514 2 ? ? ? ? 2 polymer man 'tRNA-specific 2-thiouridylase mnmA' 42411.816 2 2.8.1.- ? ? ? 3 non-polymer syn 'PHOSPHATE ION' 94.971 4 ? ? ? ? 4 non-polymer syn 'SULFATE ION' 96.063 5 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'RNA sulfuration enzyme MnmA' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no GUCCCCUUCGUCUAGAGGCCCAGGACACCGCCCUUUCACGGCGGUAACAGGGGUUCGAAUCCCCUAGGGGACGCCA GUCCCCUUCGUCUAGAGGCCCAGGACACCGCCCUUUCACGGCGGUAACAGGGGUUCGAAUCCCCUAGGGGACGCCA C,D ? 2 'polypeptide(L)' no no ;MRGSHHHHHHGSMSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIE LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSN KDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDE IGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCTV KTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQRLPLPV ; ;MRGSHHHHHHGSMSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIE LHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSN KDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDE IGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCTV KTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQRLPLPV ; A,B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 U n 1 3 C n 1 4 C n 1 5 C n 1 6 C n 1 7 U n 1 8 U n 1 9 C n 1 10 G n 1 11 U n 1 12 C n 1 13 U n 1 14 A n 1 15 G n 1 16 A n 1 17 G n 1 18 G n 1 19 C n 1 20 C n 1 21 C n 1 22 A n 1 23 G n 1 24 G n 1 25 A n 1 26 C n 1 27 A n 1 28 C n 1 29 C n 1 30 G n 1 31 C n 1 32 C n 1 33 C n 1 34 U n 1 35 U n 1 36 U n 1 37 C n 1 38 A n 1 39 C n 1 40 G n 1 41 G n 1 42 C n 1 43 G n 1 44 G n 1 45 U n 1 46 A n 1 47 A n 1 48 C n 1 49 A n 1 50 G n 1 51 G n 1 52 G n 1 53 G n 1 54 U n 1 55 U n 1 56 C n 1 57 G n 1 58 A n 1 59 A n 1 60 U n 1 61 C n 1 62 C n 1 63 C n 1 64 C n 1 65 U n 1 66 A n 1 67 G n 1 68 G n 1 69 G n 1 70 G n 1 71 A n 1 72 C n 1 73 G n 1 74 C n 1 75 C n 1 76 A n 2 1 MET n 2 2 ARG n 2 3 GLY n 2 4 SER n 2 5 HIS n 2 6 HIS n 2 7 HIS n 2 8 HIS n 2 9 HIS n 2 10 HIS n 2 11 GLY n 2 12 SER n 2 13 MET n 2 14 SER n 2 15 GLU n 2 16 THR n 2 17 ALA n 2 18 LYS n 2 19 LYS n 2 20 VAL n 2 21 ILE n 2 22 VAL n 2 23 GLY n 2 24 MET n 2 25 SER n 2 26 GLY n 2 27 GLY n 2 28 VAL n 2 29 ASP n 2 30 SER n 2 31 SER n 2 32 VAL n 2 33 SER n 2 34 ALA n 2 35 TRP n 2 36 LEU n 2 37 LEU n 2 38 GLN n 2 39 GLN n 2 40 GLN n 2 41 GLY n 2 42 TYR n 2 43 GLN n 2 44 VAL n 2 45 GLU n 2 46 GLY n 2 47 LEU n 2 48 PHE n 2 49 MET n 2 50 LYS n 2 51 ASN n 2 52 TRP n 2 53 GLU n 2 54 GLU n 2 55 ASP n 2 56 ASP n 2 57 GLY n 2 58 GLU n 2 59 GLU n 2 60 TYR n 2 61 CYS n 2 62 THR n 2 63 ALA n 2 64 ALA n 2 65 ALA n 2 66 ASP n 2 67 LEU n 2 68 ALA n 2 69 ASP n 2 70 ALA n 2 71 GLN n 2 72 ALA n 2 73 VAL n 2 74 CYS n 2 75 ASP n 2 76 LYS n 2 77 LEU n 2 78 GLY n 2 79 ILE n 2 80 GLU n 2 81 LEU n 2 82 HIS n 2 83 THR n 2 84 VAL n 2 85 ASN n 2 86 PHE n 2 87 ALA n 2 88 ALA n 2 89 GLU n 2 90 TYR n 2 91 TRP n 2 92 ASP n 2 93 ASN n 2 94 VAL n 2 95 PHE n 2 96 GLU n 2 97 LEU n 2 98 PHE n 2 99 LEU n 2 100 ALA n 2 101 GLU n 2 102 TYR n 2 103 LYS n 2 104 ALA n 2 105 GLY n 2 106 ARG n 2 107 THR n 2 108 PRO n 2 109 ASN n 2 110 PRO n 2 111 ASP n 2 112 ILE n 2 113 LEU n 2 114 CYS n 2 115 ASN n 2 116 LYS n 2 117 GLU n 2 118 ILE n 2 119 LYS n 2 120 PHE n 2 121 LYS n 2 122 ALA n 2 123 PHE n 2 124 LEU n 2 125 GLU n 2 126 PHE n 2 127 ALA n 2 128 ALA n 2 129 GLU n 2 130 ASP n 2 131 LEU n 2 132 GLY n 2 133 ALA n 2 134 ASP n 2 135 TYR n 2 136 ILE n 2 137 ALA n 2 138 THR n 2 139 GLY n 2 140 HIS n 2 141 TYR n 2 142 VAL n 2 143 ARG n 2 144 ARG n 2 145 ALA n 2 146 ASP n 2 147 VAL n 2 148 ASP n 2 149 GLY n 2 150 LYS n 2 151 SER n 2 152 ARG n 2 153 LEU n 2 154 LEU n 2 155 ARG n 2 156 GLY n 2 157 LEU n 2 158 ASP n 2 159 SER n 2 160 ASN n 2 161 LYS n 2 162 ASP n 2 163 GLN n 2 164 SER n 2 165 TYR n 2 166 PHE n 2 167 LEU n 2 168 TYR n 2 169 THR n 2 170 LEU n 2 171 SER n 2 172 HIS n 2 173 GLU n 2 174 GLN n 2 175 ILE n 2 176 ALA n 2 177 GLN n 2 178 SER n 2 179 LEU n 2 180 PHE n 2 181 PRO n 2 182 VAL n 2 183 GLY n 2 184 GLU n 2 185 LEU n 2 186 GLU n 2 187 LYS n 2 188 PRO n 2 189 GLN n 2 190 VAL n 2 191 ARG n 2 192 LYS n 2 193 ILE n 2 194 ALA n 2 195 GLU n 2 196 ASP n 2 197 LEU n 2 198 GLY n 2 199 LEU n 2 200 VAL n 2 201 THR n 2 202 ALA n 2 203 LYS n 2 204 LYS n 2 205 LYS n 2 206 ASP n 2 207 SER n 2 208 THR n 2 209 GLY n 2 210 ILE n 2 211 CYS n 2 212 PHE n 2 213 ILE n 2 214 GLY n 2 215 GLU n 2 216 ARG n 2 217 LYS n 2 218 PHE n 2 219 ARG n 2 220 GLU n 2 221 PHE n 2 222 LEU n 2 223 GLY n 2 224 ARG n 2 225 TYR n 2 226 LEU n 2 227 PRO n 2 228 ALA n 2 229 GLN n 2 230 PRO n 2 231 GLY n 2 232 LYS n 2 233 ILE n 2 234 ILE n 2 235 THR n 2 236 VAL n 2 237 ASP n 2 238 GLY n 2 239 ASP n 2 240 GLU n 2 241 ILE n 2 242 GLY n 2 243 GLU n 2 244 HIS n 2 245 GLN n 2 246 GLY n 2 247 LEU n 2 248 MET n 2 249 TYR n 2 250 HIS n 2 251 THR n 2 252 LEU n 2 253 GLY n 2 254 GLN n 2 255 ARG n 2 256 LYS n 2 257 GLY n 2 258 LEU n 2 259 GLY n 2 260 ILE n 2 261 GLY n 2 262 GLY n 2 263 THR n 2 264 LYS n 2 265 GLU n 2 266 GLY n 2 267 THR n 2 268 GLU n 2 269 GLU n 2 270 PRO n 2 271 TRP n 2 272 TYR n 2 273 VAL n 2 274 VAL n 2 275 ASP n 2 276 LYS n 2 277 ASP n 2 278 VAL n 2 279 GLU n 2 280 ASN n 2 281 ASN n 2 282 ILE n 2 283 LEU n 2 284 VAL n 2 285 VAL n 2 286 ALA n 2 287 GLN n 2 288 GLY n 2 289 HIS n 2 290 GLU n 2 291 HIS n 2 292 PRO n 2 293 ARG n 2 294 LEU n 2 295 MET n 2 296 SER n 2 297 VAL n 2 298 GLY n 2 299 LEU n 2 300 ILE n 2 301 ALA n 2 302 GLN n 2 303 GLN n 2 304 LEU n 2 305 HIS n 2 306 TRP n 2 307 VAL n 2 308 ASP n 2 309 ARG n 2 310 GLU n 2 311 PRO n 2 312 PHE n 2 313 THR n 2 314 GLY n 2 315 THR n 2 316 MET n 2 317 ARG n 2 318 CYS n 2 319 THR n 2 320 VAL n 2 321 LYS n 2 322 THR n 2 323 ARG n 2 324 TYR n 2 325 ARG n 2 326 GLN n 2 327 THR n 2 328 ASP n 2 329 ILE n 2 330 PRO n 2 331 CYS n 2 332 THR n 2 333 VAL n 2 334 LYS n 2 335 ALA n 2 336 LEU n 2 337 ASP n 2 338 ASP n 2 339 ASP n 2 340 ARG n 2 341 ILE n 2 342 GLU n 2 343 VAL n 2 344 ILE n 2 345 PHE n 2 346 ASP n 2 347 GLU n 2 348 PRO n 2 349 VAL n 2 350 ALA n 2 351 ALA n 2 352 VAL n 2 353 THR n 2 354 PRO n 2 355 GLY n 2 356 GLN n 2 357 SER n 2 358 ALA n 2 359 VAL n 2 360 PHE n 2 361 TYR n 2 362 ASN n 2 363 GLY n 2 364 GLU n 2 365 VAL n 2 366 CYS n 2 367 LEU n 2 368 GLY n 2 369 GLY n 2 370 GLY n 2 371 ILE n 2 372 ILE n 2 373 GLU n 2 374 GLN n 2 375 ARG n 2 376 LEU n 2 377 PRO n 2 378 LEU n 2 379 PRO n 2 380 VAL n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'B834(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pQE80L _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'RNA was prepared by in vitro transcription.' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP MNMA_ECOLI P25745 2 ;MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWD NVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSH EQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTL GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCT VKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQRLPLPV ; 1 ? 2 PDB 2DER 2DER 1 GUCCCCUUCGUCUAGAGGCCCAGGACACCGCCCUUUCACGGCGGUAACAGGGGUUCGAAUCCCCUAGGGGACGCCA 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2DER A 13 ? 380 ? P25745 1 ? 368 ? 1 368 2 1 2DER B 13 ? 380 ? P25745 1 ? 368 ? 1 368 3 2 2DER C 1 ? 76 ? 2DER 1 ? 76 ? 1 76 4 2 2DER D 1 ? 76 ? 2DER 1 ? 76 ? 1 76 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2DER MET A 1 ? UNP P25745 ? ? 'expression tag' -11 1 1 2DER ARG A 2 ? UNP P25745 ? ? 'expression tag' -10 2 1 2DER GLY A 3 ? UNP P25745 ? ? 'expression tag' -9 3 1 2DER SER A 4 ? UNP P25745 ? ? 'expression tag' -8 4 1 2DER HIS A 5 ? UNP P25745 ? ? 'expression tag' -7 5 1 2DER HIS A 6 ? UNP P25745 ? ? 'expression tag' -6 6 1 2DER HIS A 7 ? UNP P25745 ? ? 'expression tag' -5 7 1 2DER HIS A 8 ? UNP P25745 ? ? 'expression tag' -4 8 1 2DER HIS A 9 ? UNP P25745 ? ? 'expression tag' -3 9 1 2DER HIS A 10 ? UNP P25745 ? ? 'expression tag' -2 10 1 2DER GLY A 11 ? UNP P25745 ? ? 'expression tag' -1 11 1 2DER SER A 12 ? UNP P25745 ? ? 'expression tag' 0 12 2 2DER MET B 1 ? UNP P25745 ? ? 'expression tag' -11 13 2 2DER ARG B 2 ? UNP P25745 ? ? 'expression tag' -10 14 2 2DER GLY B 3 ? UNP P25745 ? ? 'expression tag' -9 15 2 2DER SER B 4 ? UNP P25745 ? ? 'expression tag' -8 16 2 2DER HIS B 5 ? UNP P25745 ? ? 'expression tag' -7 17 2 2DER HIS B 6 ? UNP P25745 ? ? 'expression tag' -6 18 2 2DER HIS B 7 ? UNP P25745 ? ? 'expression tag' -5 19 2 2DER HIS B 8 ? UNP P25745 ? ? 'expression tag' -4 20 2 2DER HIS B 9 ? UNP P25745 ? ? 'expression tag' -3 21 2 2DER HIS B 10 ? UNP P25745 ? ? 'expression tag' -2 22 2 2DER GLY B 11 ? UNP P25745 ? ? 'expression tag' -1 23 2 2DER SER B 12 ? UNP P25745 ? ? 'expression tag' 0 24 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2DER _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.85 _exptl_crystal.density_percent_sol 68.03 _exptl_crystal.description 'THE STRUCTURE FACTOR FILE CONTAINS FRIEDEL PAIRS.' _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details ;90mM HEPES-Na buffer (pH 7.5), 40mM ammonium dihydrogen phosphate, 1.8% PEG400, 1.7-1.9M ammonium sulfate, VAPOR DIFFUSION, HANGING DROP, temperature 293K ; _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 PEG400 ? ? ? 1 2 1 HEPES-Na ? ? ? 1 3 1 'ammonium dihydrogen phosphate' ? ? ? 1 4 1 'ammonium sulfate' ? ? ? 1 5 1 HOH ? ? ? 1 6 2 PEG400 ? ? ? 1 7 2 HEPES-Na ? ? ? 1 8 2 'ammonium dihydrogen phosphate' ? ? ? 1 9 2 'ammonium sulfate' ? ? ? 1 10 2 HOH ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 30 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2004-12-07 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97927 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL41XU' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL41XU _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97927 # _reflns.entry_id 2DER _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 3.1 _reflns.number_obs 61680 _reflns.number_all ? _reflns.percent_possible_obs 89.8 _reflns.pdbx_Rmerge_I_obs 0.118 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 11.2 _reflns.B_iso_Wilson_estimate 0 _reflns.pdbx_redundancy 4.3 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 3.1 _reflns_shell.d_res_low 3.21 _reflns_shell.percent_possible_all 41.9 _reflns_shell.Rmerge_I_obs 0.363 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.8 _reflns_shell.pdbx_redundancy 1.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2DER _refine.ls_number_reflns_obs 60663 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 75333.90 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 46.75 _refine.ls_d_res_high 3.10 _refine.ls_percent_reflns_obs 83.9 _refine.ls_R_factor_obs 0.219 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.219 _refine.ls_R_factor_R_free 0.269 _refine.ls_R_factor_R_free_error 0.005 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 2901 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 69.0 _refine.aniso_B[1][1] 5.32 _refine.aniso_B[2][2] -5.58 _refine.aniso_B[3][3] 0.25 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 12.37 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.283117 _refine.solvent_model_param_bsol 24.9515 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'THE STRUCTURE FACTOR FILE CONTAINS FRIEDEL PAIRS.' _refine.pdbx_starting_model 'PDB ENTRY 2DET' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2DER _refine_analyze.Luzzati_coordinate_error_obs 0.41 _refine_analyze.Luzzati_sigma_a_obs 0.80 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.51 _refine_analyze.Luzzati_sigma_a_free 0.85 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 5548 _refine_hist.pdbx_number_atoms_nucleic_acid 3082 _refine_hist.pdbx_number_atoms_ligand 45 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 8675 _refine_hist.d_res_high 3.10 _refine_hist.d_res_low 46.75 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.4 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 22.4 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.30 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 3.10 _refine_ls_shell.d_res_low 3.29 _refine_ls_shell.number_reflns_R_work 4404 _refine_ls_shell.R_factor_R_work 0.388 _refine_ls_shell.percent_reflns_obs 38.1 _refine_ls_shell.R_factor_R_free 0.422 _refine_ls_shell.R_factor_R_free_error 0.031 _refine_ls_shell.percent_reflns_R_free 4.1 _refine_ls_shell.number_reflns_R_free 187 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 dna-rna_rep.param dna-rna.top 'X-RAY DIFFRACTION' 3 ion.param ion.top 'X-RAY DIFFRACTION' # _struct.entry_id 2DER _struct.title 'Cocrystal structure of an RNA sulfuration enzyme MnmA and tRNA-Glu in the initial tRNA binding state' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2DER _struct_keywords.pdbx_keywords Transferase/RNA _struct_keywords.text 'Protein-RNA complex, Transferase-RNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 3 ? K N N 3 ? L N N 4 ? M N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER C 30 ? GLN C 39 ? SER A 18 GLN A 27 1 ? 10 HELX_P HELX_P2 2 ASP C 56 ? GLY C 78 ? ASP A 44 GLY A 66 1 ? 23 HELX_P HELX_P3 3 PHE C 86 ? VAL C 94 ? PHE A 74 VAL A 82 1 ? 9 HELX_P HELX_P4 4 VAL C 94 ? ALA C 104 ? VAL A 82 ALA A 92 1 ? 11 HELX_P HELX_P5 5 ASN C 109 ? ILE C 118 ? ASN A 97 ILE A 106 1 ? 10 HELX_P HELX_P6 6 LYS C 121 ? ASP C 130 ? LYS A 109 ASP A 118 1 ? 10 HELX_P HELX_P7 7 GLN C 163 ? TYR C 168 ? GLN A 151 TYR A 156 5 ? 6 HELX_P HELX_P8 8 SER C 171 ? GLN C 177 ? SER A 159 GLN A 165 1 ? 7 HELX_P HELX_P9 9 PRO C 181 ? LEU C 185 ? PRO A 169 LEU A 173 5 ? 5 HELX_P HELX_P10 10 GLU C 186 ? LEU C 197 ? GLU A 174 LEU A 185 1 ? 12 HELX_P HELX_P11 11 LYS C 217 ? ARG C 224 ? LYS A 205 ARG A 212 1 ? 8 HELX_P HELX_P12 12 VAL D 28 ? GLN D 39 ? VAL B 16 GLN B 27 1 ? 12 HELX_P HELX_P13 13 ALA D 63 ? LEU D 77 ? ALA B 51 LEU B 65 1 ? 15 HELX_P HELX_P14 14 ALA D 88 ? ALA D 104 ? ALA B 76 ALA B 92 1 ? 17 HELX_P HELX_P15 15 ASN D 109 ? ILE D 118 ? ASN B 97 ILE B 106 1 ? 10 HELX_P HELX_P16 16 LYS D 121 ? ASP D 130 ? LYS B 109 ASP B 118 1 ? 10 HELX_P HELX_P17 17 ASP D 158 ? ASP D 162 ? ASP B 146 ASP B 150 5 ? 5 HELX_P HELX_P18 18 GLN D 163 ? TYR D 168 ? GLN B 151 TYR B 156 5 ? 6 HELX_P HELX_P19 19 SER D 171 ? GLN D 177 ? SER B 159 GLN B 165 1 ? 7 HELX_P HELX_P20 20 PRO D 181 ? LEU D 185 ? PRO B 169 LEU B 173 5 ? 5 HELX_P HELX_P21 21 GLU D 186 ? ASP D 196 ? GLU B 174 ASP B 184 1 ? 11 HELX_P HELX_P22 22 GLY D 209 ? TYR D 225 ? GLY B 197 TYR B 213 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? D CYS 114 SG ? ? ? 1_555 D CYS 211 SG ? ? B CYS 102 B CYS 199 1_555 ? ? ? ? ? ? ? 2.032 ? ? hydrog1 hydrog ? ? A U 2 O2 ? ? ? 1_555 A C 72 N4 ? ? C U 2 C C 72 1_555 ? ? ? ? ? ? 'U-C MISPAIR' ? ? ? hydrog2 hydrog ? ? A C 5 N3 ? ? ? 1_555 A G 68 N1 ? ? C C 5 C G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A C 5 N4 ? ? ? 1_555 A G 68 O6 ? ? C C 5 C G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A C 5 O2 ? ? ? 1_555 A G 68 N2 ? ? C C 5 C G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A U 7 N3 ? ? ? 1_555 A A 66 N1 ? ? C U 7 C A 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A U 7 O4 ? ? ? 1_555 A A 66 N6 ? ? C U 7 C A 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A U 8 N3 ? ? ? 1_555 A A 14 N7 ? ? C U 8 C A 14 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog8 hydrog ? ? A U 8 O2 ? ? ? 1_555 A A 14 N6 ? ? C U 8 C A 14 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog9 hydrog ? ? A C 9 N4 ? ? ? 1_555 A G 24 O6 ? ? C C 9 C G 23 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog10 hydrog ? ? A G 10 N1 ? ? ? 1_555 A C 26 N3 ? ? C G 10 C C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 10 N2 ? ? ? 1_555 A C 26 O2 ? ? C G 10 C C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 10 O6 ? ? ? 1_555 A C 26 N4 ? ? C G 10 C C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A U 11 N3 ? ? ? 1_555 A A 25 N1 ? ? C U 11 C A 24 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog14 hydrog ? ? A C 12 N3 ? ? ? 1_555 A G 24 N1 ? ? C C 12 C G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A C 12 N4 ? ? ? 1_555 A G 24 O6 ? ? C C 12 C G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A C 12 O2 ? ? ? 1_555 A G 24 N2 ? ? C C 12 C G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A U 13 N3 ? ? ? 1_555 A G 23 O6 ? ? C U 13 C G 22 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog18 hydrog ? ? A U 13 O2 ? ? ? 1_555 A G 23 N1 ? ? C U 13 C G 22 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog19 hydrog ? ? A A 14 N6 ? ? ? 1_555 A A 22 N3 ? ? C A 14 C A 21 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog20 hydrog ? ? A G 15 N2 ? ? ? 1_555 A C 20 O2 ? ? C G 15 C C 20 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog21 hydrog ? ? A G 15 N1 ? ? ? 1_555 A C 48 O2 ? ? C G 15 C C 47 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog22 hydrog ? ? A G 15 N2 ? ? ? 1_555 A C 48 N3 ? ? C G 15 C C 47 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog23 hydrog ? ? A G 17 N1 ? ? ? 1_555 A U 55 O2 ? ? C G 17 C U 55 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog24 hydrog ? ? A G 18 N1 ? ? ? 1_555 A C 56 N3 ? ? C G 18 C C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 18 N2 ? ? ? 1_555 A C 56 O2 ? ? C G 18 C C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A G 18 O6 ? ? ? 1_555 A C 56 N4 ? ? C G 18 C C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A C 20 O2 ? ? ? 1_555 A C 48 N4 ? ? C C 20 C C 47 1_555 ? ? ? ? ? ? 'C-C MISPAIR' ? ? ? hydrog28 hydrog ? ? A G 23 N7 ? ? ? 1_555 A A 47 N6 ? ? C G 22 C A 46 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog29 hydrog ? ? A A 27 N6 ? ? ? 1_555 A U 45 O4 ? ? C A 26 C U 44 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog30 hydrog ? ? A C 28 N3 ? ? ? 1_555 A G 44 N1 ? ? C C 27 C G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A C 28 N4 ? ? ? 1_555 A G 44 O6 ? ? C C 27 C G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A C 28 O2 ? ? ? 1_555 A G 44 N2 ? ? C C 27 C G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A C 29 N3 ? ? ? 1_555 A G 43 N1 ? ? C C 28 C G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A C 29 N4 ? ? ? 1_555 A G 43 O6 ? ? C C 28 C G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A C 29 O2 ? ? ? 1_555 A G 43 N2 ? ? C C 28 C G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A G 30 N1 ? ? ? 1_555 A C 42 N3 ? ? C G 29 C C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A G 30 N2 ? ? ? 1_555 A C 42 O2 ? ? C G 29 C C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A G 30 O6 ? ? ? 1_555 A C 42 N4 ? ? C G 29 C C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A C 31 N3 ? ? ? 1_555 A G 41 N1 ? ? C C 30 C G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A C 31 N4 ? ? ? 1_555 A G 41 O6 ? ? C C 30 C G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A C 31 O2 ? ? ? 1_555 A G 41 N2 ? ? C C 30 C G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A C 32 N3 ? ? ? 1_555 A G 40 N1 ? ? C C 31 C G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A C 32 N4 ? ? ? 1_555 A G 40 O6 ? ? C C 31 C G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A C 32 O2 ? ? ? 1_555 A G 40 N2 ? ? C C 31 C G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A C 33 O2 ? ? ? 1_555 A C 39 N4 ? ? C C 32 C C 38 1_555 ? ? ? ? ? ? 'C-C MISPAIR' ? ? ? hydrog46 hydrog ? ? A A 49 N1 ? ? ? 1_555 A U 65 N3 ? ? C A 49 C U 65 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog47 hydrog ? ? A G 50 N1 ? ? ? 1_555 A C 64 N3 ? ? C G 50 C C 64 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog48 hydrog ? ? A G 51 N1 ? ? ? 1_555 A C 63 O2 ? ? C G 51 C C 63 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog49 hydrog ? ? A G 52 N1 ? ? ? 1_555 A C 62 N3 ? ? C G 52 C C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A G 52 N2 ? ? ? 1_555 A C 62 O2 ? ? C G 52 C C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A G 52 O6 ? ? ? 1_555 A C 62 N4 ? ? C G 52 C C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A G 53 N1 ? ? ? 1_555 A C 61 N3 ? ? C G 53 C C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A G 53 N2 ? ? ? 1_555 A C 61 O2 ? ? C G 53 C C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A G 53 O6 ? ? ? 1_555 A C 61 N4 ? ? C G 53 C C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A U 54 N3 ? ? ? 1_555 A A 58 N7 ? ? C U 54 C A 58 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog56 hydrog ? ? A U 54 O2 ? ? ? 1_555 A A 58 N6 ? ? C U 54 C A 58 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog57 hydrog ? ? B C 4 N3 ? ? ? 1_555 B G 69 N1 ? ? D C 4 D G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? B C 4 N4 ? ? ? 1_555 B G 69 O6 ? ? D C 4 D G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? B C 4 O2 ? ? ? 1_555 B G 69 N2 ? ? D C 4 D G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? B C 5 N3 ? ? ? 1_555 B G 68 N1 ? ? D C 5 D G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? B C 5 N4 ? ? ? 1_555 B G 68 O6 ? ? D C 5 D G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? B C 5 O2 ? ? ? 1_555 B G 68 N2 ? ? D C 5 D G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? B C 6 N4 ? ? ? 1_555 B G 67 O6 ? ? D C 6 D G 67 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog64 hydrog ? ? B U 7 N3 ? ? ? 1_555 B A 66 N1 ? ? D U 7 D A 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? B U 7 O4 ? ? ? 1_555 B A 66 N6 ? ? D U 7 D A 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? B U 8 N3 ? ? ? 1_555 B A 14 N7 ? ? D U 8 D A 14 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog67 hydrog ? ? B U 8 O2 ? ? ? 1_555 B A 14 N6 ? ? D U 8 D A 14 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog68 hydrog ? ? B C 9 N4 ? ? ? 1_555 B G 24 N7 ? ? D C 9 D G 23 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog69 hydrog ? ? B G 10 N1 ? ? ? 1_555 B C 26 N3 ? ? D G 10 D C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? B G 10 N2 ? ? ? 1_555 B C 26 O2 ? ? D G 10 D C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? B G 10 O6 ? ? ? 1_555 B C 26 N4 ? ? D G 10 D C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? B U 11 N3 ? ? ? 1_555 B A 25 N1 ? ? D U 11 D A 24 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog73 hydrog ? ? B C 12 N3 ? ? ? 1_555 B G 24 N1 ? ? D C 12 D G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? B C 12 N4 ? ? ? 1_555 B G 24 O6 ? ? D C 12 D G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? B C 12 O2 ? ? ? 1_555 B G 24 N2 ? ? D C 12 D G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? B U 13 N3 ? ? ? 1_555 B G 23 O6 ? ? D U 13 D G 22 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog77 hydrog ? ? B U 13 O2 ? ? ? 1_555 B G 23 N1 ? ? D U 13 D G 22 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog78 hydrog ? ? B A 14 N6 ? ? ? 1_555 B A 22 N3 ? ? D A 14 D A 21 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog79 hydrog ? ? B G 15 N2 ? ? ? 1_555 B C 20 O2 ? ? D G 15 D C 20 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog80 hydrog ? ? B G 15 N1 ? ? ? 1_555 B C 48 O2 ? ? D G 15 D C 47 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog81 hydrog ? ? B G 15 N2 ? ? ? 1_555 B C 48 N3 ? ? D G 15 D C 47 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog82 hydrog ? ? B G 17 N1 ? ? ? 1_555 B U 55 O2 ? ? D G 17 D U 55 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog83 hydrog ? ? B G 18 N1 ? ? ? 1_555 B C 56 N3 ? ? D G 18 D C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? B G 18 N2 ? ? ? 1_555 B C 56 O2 ? ? D G 18 D C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? B G 18 O6 ? ? ? 1_555 B C 56 N4 ? ? D G 18 D C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? B C 20 O2 ? ? ? 1_555 B C 48 N4 ? ? D C 20 D C 47 1_555 ? ? ? ? ? ? 'C-C MISPAIR' ? ? ? hydrog87 hydrog ? ? B G 23 N7 ? ? ? 1_555 B A 47 N6 ? ? D G 22 D A 46 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog88 hydrog ? ? B A 27 N6 ? ? ? 1_555 B U 45 O4 ? ? D A 26 D U 44 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog89 hydrog ? ? B C 28 N3 ? ? ? 1_555 B G 44 N1 ? ? D C 27 D G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? B C 28 N4 ? ? ? 1_555 B G 44 O6 ? ? D C 27 D G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? B C 28 O2 ? ? ? 1_555 B G 44 N2 ? ? D C 27 D G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? B C 29 N3 ? ? ? 1_555 B G 43 N1 ? ? D C 28 D G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? B C 29 N4 ? ? ? 1_555 B G 43 O6 ? ? D C 28 D G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? B C 29 O2 ? ? ? 1_555 B G 43 N2 ? ? D C 28 D G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? B G 30 N1 ? ? ? 1_555 B C 42 N3 ? ? D G 29 D C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? B G 30 N2 ? ? ? 1_555 B C 42 O2 ? ? D G 29 D C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? B G 30 O6 ? ? ? 1_555 B C 42 N4 ? ? D G 29 D C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? B C 31 N3 ? ? ? 1_555 B G 41 N1 ? ? D C 30 D G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? B C 31 N4 ? ? ? 1_555 B G 41 O6 ? ? D C 30 D G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? B C 31 O2 ? ? ? 1_555 B G 41 N2 ? ? D C 30 D G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog101 hydrog ? ? B C 32 N3 ? ? ? 1_555 B G 40 N1 ? ? D C 31 D G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog102 hydrog ? ? B C 32 N4 ? ? ? 1_555 B G 40 O6 ? ? D C 31 D G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? B C 32 O2 ? ? ? 1_555 B G 40 N2 ? ? D C 31 D G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? B C 33 O2 ? ? ? 1_555 B C 39 N4 ? ? D C 32 D C 38 1_555 ? ? ? ? ? ? 'C-C MISPAIR' ? ? ? hydrog105 hydrog ? ? B G 50 N1 ? ? ? 1_555 B C 64 N3 ? ? D G 50 D C 64 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog106 hydrog ? ? B G 51 N1 ? ? ? 1_555 B C 63 O2 ? ? D G 51 D C 63 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog107 hydrog ? ? B G 52 N1 ? ? ? 1_555 B C 62 N3 ? ? D G 52 D C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog108 hydrog ? ? B G 52 N2 ? ? ? 1_555 B C 62 O2 ? ? D G 52 D C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog109 hydrog ? ? B G 52 O6 ? ? ? 1_555 B C 62 N4 ? ? D G 52 D C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog110 hydrog ? ? B G 53 N1 ? ? ? 1_555 B C 61 N3 ? ? D G 53 D C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? B G 53 N2 ? ? ? 1_555 B C 61 O2 ? ? D G 53 D C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? B G 53 O6 ? ? ? 1_555 B C 61 N4 ? ? D G 53 D C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog113 hydrog ? ? B U 54 N3 ? ? ? 1_555 B A 58 N7 ? ? D U 54 D A 58 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog114 hydrog ? ? B U 54 O2 ? ? ? 1_555 B A 58 N6 ? ? D U 54 D A 58 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 9 ? C ? 4 ? D ? 5 ? E ? 2 ? F ? 4 ? G ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel B 8 9 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? parallel C 3 4 ? anti-parallel D 1 2 ? parallel D 2 3 ? parallel D 3 4 ? parallel D 4 5 ? parallel E 1 2 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? parallel F 3 4 ? anti-parallel G 1 2 ? anti-parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel G 4 5 ? anti-parallel G 5 6 ? anti-parallel G 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU C 81 ? ASN C 85 ? LEU A 69 ASN A 73 A 2 GLN C 43 ? LYS C 50 ? GLN A 31 LYS A 38 A 3 LYS C 19 ? GLY C 23 ? LYS A 7 GLY A 11 A 4 TYR C 135 ? ALA C 137 ? TYR A 123 ALA A 125 A 5 SER C 178 ? LEU C 179 ? SER A 166 LEU A 167 B 1 ARG C 143 ? VAL C 147 ? ARG A 131 VAL A 135 B 2 LYS C 150 ? LEU C 154 ? LYS A 138 LEU A 142 B 3 VAL C 365 ? PRO C 377 ? VAL A 353 PRO A 365 B 4 SER C 357 ? ASN C 362 ? SER A 345 ASN A 350 B 5 THR C 315 ? LYS C 321 ? THR A 303 LYS A 309 B 6 ILE C 329 ? LYS C 334 ? ILE A 317 LYS A 322 B 7 ILE C 341 ? VAL C 349 ? ILE A 329 VAL A 337 B 8 SER C 296 ? TRP C 306 ? SER A 284 TRP A 294 B 9 VAL C 365 ? PRO C 377 ? VAL A 353 PRO A 365 C 1 GLU C 240 ? GLU C 243 ? GLU A 228 GLU A 231 C 2 LYS C 232 ? THR C 235 ? LYS A 220 THR A 223 C 3 ILE C 282 ? GLN C 287 ? ILE A 270 GLN A 275 C 4 TRP C 271 ? ASP C 277 ? TRP A 259 ASP A 265 D 1 LEU D 81 ? ASN D 85 ? LEU B 69 ASN B 73 D 2 GLN D 43 ? LYS D 50 ? GLN B 31 LYS B 38 D 3 LYS D 19 ? GLY D 23 ? LYS B 7 GLY B 11 D 4 TYR D 135 ? ALA D 137 ? TYR B 123 ALA B 125 D 5 SER D 178 ? LEU D 179 ? SER B 166 LEU B 167 E 1 ARG D 143 ? VAL D 147 ? ARG B 131 VAL B 135 E 2 LYS D 150 ? LEU D 154 ? LYS B 138 LEU B 142 F 1 GLU D 240 ? GLU D 243 ? GLU B 228 GLU B 231 F 2 LYS D 232 ? THR D 235 ? LYS B 220 THR B 223 F 3 ILE D 282 ? GLN D 287 ? ILE B 270 GLN B 275 F 4 TRP D 271 ? ASP D 277 ? TRP B 259 ASP B 265 G 1 SER D 296 ? TRP D 306 ? SER B 284 TRP B 294 G 2 ILE D 341 ? VAL D 349 ? ILE B 329 VAL B 337 G 3 ILE D 329 ? LYS D 334 ? ILE B 317 LYS B 322 G 4 THR D 315 ? LYS D 321 ? THR B 303 LYS B 309 G 5 SER D 357 ? ASN D 362 ? SER B 345 ASN B 350 G 6 VAL D 365 ? PRO D 377 ? VAL B 353 PRO B 365 G 7 SER D 296 ? TRP D 306 ? SER B 284 TRP B 294 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O HIS C 82 ? O HIS A 70 N GLY C 46 ? N GLY A 34 A 2 3 O GLN C 43 ? O GLN A 31 N VAL C 20 ? N VAL A 8 A 3 4 N ILE C 21 ? N ILE A 9 O TYR C 135 ? O TYR A 123 A 4 5 N ILE C 136 ? N ILE A 124 O LEU C 179 ? O LEU A 167 B 1 2 N ARG C 143 ? N ARG A 131 O LEU C 154 ? O LEU A 142 B 2 3 N LEU C 153 ? N LEU A 141 O CYS C 366 ? O CYS A 354 B 3 4 O GLY C 370 ? O GLY A 358 N ALA C 358 ? N ALA A 346 B 4 5 O VAL C 359 ? O VAL A 347 N LYS C 321 ? N LYS A 309 B 5 6 N MET C 316 ? N MET A 304 O VAL C 333 ? O VAL A 321 B 6 7 N LYS C 334 ? N LYS A 322 O GLU C 342 ? O GLU A 330 B 7 8 O PHE C 345 ? O PHE A 333 N VAL C 297 ? N VAL A 285 B 8 9 N VAL C 297 ? N VAL A 285 O LEU C 376 ? O LEU A 364 C 1 2 O GLY C 242 ? O GLY A 230 N ILE C 233 ? N ILE A 221 C 2 3 N ILE C 234 ? N ILE A 222 O LEU C 283 ? O LEU A 271 C 3 4 O ILE C 282 ? O ILE A 270 N ASP C 277 ? N ASP A 265 D 1 2 O VAL D 84 ? O VAL B 72 N LYS D 50 ? N LYS B 38 D 2 3 O GLU D 45 ? O GLU B 33 N VAL D 22 ? N VAL B 10 D 3 4 N ILE D 21 ? N ILE B 9 O TYR D 135 ? O TYR B 123 D 4 5 N ILE D 136 ? N ILE B 124 O LEU D 179 ? O LEU B 167 E 1 2 N ARG D 143 ? N ARG B 131 O LEU D 154 ? O LEU B 142 F 1 2 O GLY D 242 ? O GLY B 230 N ILE D 233 ? N ILE B 221 F 2 3 N ILE D 234 ? N ILE B 222 O LEU D 283 ? O LEU B 271 F 3 4 O ILE D 282 ? O ILE B 270 N ASP D 277 ? N ASP B 265 G 1 2 N SER D 296 ? N SER B 284 O VAL D 349 ? O VAL B 337 G 2 3 O GLU D 342 ? O GLU B 330 N LYS D 334 ? N LYS B 322 G 3 4 O VAL D 333 ? O VAL B 321 N MET D 316 ? N MET B 304 G 4 5 N LYS D 321 ? N LYS B 309 O VAL D 359 ? O VAL B 347 G 5 6 N ALA D 358 ? N ALA B 346 O GLY D 370 ? O GLY B 358 G 6 7 O GLU D 373 ? O GLU B 361 N ILE D 300 ? N ILE B 288 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B PO4 1001 ? 6 'BINDING SITE FOR RESIDUE PO4 B 1001' AC2 Software A PO4 1002 ? 7 'BINDING SITE FOR RESIDUE PO4 A 1002' AC3 Software B PO4 1003 ? 6 'BINDING SITE FOR RESIDUE PO4 B 1003' AC4 Software C PO4 1004 ? 1 'BINDING SITE FOR RESIDUE PO4 C 1004' AC5 Software A SO4 2001 ? 2 'BINDING SITE FOR RESIDUE SO4 A 2001' AC6 Software B SO4 2002 ? 2 'BINDING SITE FOR RESIDUE SO4 B 2002' AC7 Software A SO4 2003 ? 1 'BINDING SITE FOR RESIDUE SO4 A 2003' AC8 Software B SO4 2004 ? 3 'BINDING SITE FOR RESIDUE SO4 B 2004' AC9 Software A SO4 2005 ? 2 'BINDING SITE FOR RESIDUE SO4 A 2005' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 SER D 25 ? SER B 13 . ? 1_555 ? 2 AC1 6 GLY D 27 ? GLY B 15 . ? 1_555 ? 3 AC1 6 ASP D 29 ? ASP B 17 . ? 1_555 ? 4 AC1 6 SER D 30 ? SER B 18 . ? 1_555 ? 5 AC1 6 GLY D 139 ? GLY B 127 . ? 1_555 ? 6 AC1 6 U B 35 ? U D 34 . ? 1_555 ? 7 AC2 7 SER C 25 ? SER A 13 . ? 1_555 ? 8 AC2 7 GLY C 27 ? GLY A 15 . ? 1_555 ? 9 AC2 7 VAL C 28 ? VAL A 16 . ? 1_555 ? 10 AC2 7 ASP C 29 ? ASP A 17 . ? 1_555 ? 11 AC2 7 SER C 30 ? SER A 18 . ? 1_555 ? 12 AC2 7 GLY C 139 ? GLY A 127 . ? 1_555 ? 13 AC2 7 U A 35 ? U C 34 . ? 1_555 ? 14 AC3 6 LYS D 119 ? LYS B 107 . ? 1_555 ? 15 AC3 6 GLY D 209 ? GLY B 197 . ? 1_555 ? 16 AC3 6 ILE D 210 ? ILE B 198 . ? 1_555 ? 17 AC3 6 CYS D 211 ? CYS B 199 . ? 1_555 ? 18 AC3 6 PHE D 212 ? PHE B 200 . ? 1_555 ? 19 AC3 6 U B 35 ? U D 34 . ? 1_555 ? 20 AC4 1 U A 35 ? U C 34 . ? 1_555 ? 21 AC5 2 HIS C 82 ? HIS A 70 . ? 1_555 ? 22 AC5 2 THR C 83 ? THR A 71 . ? 1_555 ? 23 AC6 2 HIS D 82 ? HIS B 70 . ? 1_555 ? 24 AC6 2 THR D 83 ? THR B 71 . ? 1_555 ? 25 AC7 1 ASN C 85 ? ASN A 73 . ? 1_555 ? 26 AC8 3 ARG D 325 ? ARG B 313 . ? 1_555 ? 27 AC8 3 GLN D 326 ? GLN B 314 . ? 1_555 ? 28 AC8 3 THR D 327 ? THR B 315 . ? 1_555 ? 29 AC9 2 GLN C 326 ? GLN A 314 . ? 1_555 ? 30 AC9 2 THR C 327 ? THR A 315 . ? 1_555 ? # _database_PDB_matrix.entry_id 2DER _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2DER _atom_sites.fract_transf_matrix[1][1] 0.004437 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000912 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.005687 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019275 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G C . n A 1 2 U 2 2 2 U U C . n A 1 3 C 3 3 3 C C C . n A 1 4 C 4 4 4 C C C . n A 1 5 C 5 5 5 C C C . n A 1 6 C 6 6 6 C C C . n A 1 7 U 7 7 7 U U C . n A 1 8 U 8 8 8 U U C . n A 1 9 C 9 9 9 C C C . n A 1 10 G 10 10 10 G G C . n A 1 11 U 11 11 11 U U C . n A 1 12 C 12 12 12 C C C . n A 1 13 U 13 13 13 U U C . n A 1 14 A 14 14 14 A A C . n A 1 15 G 15 15 15 G G C . n A 1 16 A 16 16 16 A A C . n A 1 17 G 17 17 17 G G C . n A 1 18 G 18 18 18 G G C . n A 1 19 C 19 19 19 C C C . n A 1 20 C 20 20 20 C C C . n A 1 21 C 21 20 20 C C C A n A 1 22 A 22 21 21 A A C . n A 1 23 G 23 22 22 G G C . n A 1 24 G 24 23 23 G G C . n A 1 25 A 25 24 24 A A C . n A 1 26 C 26 25 25 C C C . n A 1 27 A 27 26 26 A A C . n A 1 28 C 28 27 27 C C C . n A 1 29 C 29 28 28 C C C . n A 1 30 G 30 29 29 G G C . n A 1 31 C 31 30 30 C C C . n A 1 32 C 32 31 31 C C C . n A 1 33 C 33 32 32 C C C . n A 1 34 U 34 33 33 U U C . n A 1 35 U 35 34 34 U U C . n A 1 36 U 36 35 35 U U C . n A 1 37 C 37 36 36 C C C . n A 1 38 A 38 37 37 A A C . n A 1 39 C 39 38 38 C C C . n A 1 40 G 40 39 39 G G C . n A 1 41 G 41 40 40 G G C . n A 1 42 C 42 41 41 C C C . n A 1 43 G 43 42 42 G G C . n A 1 44 G 44 43 43 G G C . n A 1 45 U 45 44 44 U U C . n A 1 46 A 46 45 45 A A C . n A 1 47 A 47 46 46 A A C . n A 1 48 C 48 47 47 C C C . n A 1 49 A 49 49 49 A A C . n A 1 50 G 50 50 50 G G C . n A 1 51 G 51 51 51 G G C . n A 1 52 G 52 52 52 G G C . n A 1 53 G 53 53 53 G G C . n A 1 54 U 54 54 54 U U C . n A 1 55 U 55 55 55 U U C . n A 1 56 C 56 56 56 C C C . n A 1 57 G 57 57 57 G G C . n A 1 58 A 58 58 58 A A C . n A 1 59 A 59 59 59 A A C . n A 1 60 U 60 60 60 U U C . n A 1 61 C 61 61 61 C C C . n A 1 62 C 62 62 62 C C C . n A 1 63 C 63 63 63 C C C . n A 1 64 C 64 64 64 C C C . n A 1 65 U 65 65 65 U U C . n A 1 66 A 66 66 66 A A C . n A 1 67 G 67 67 67 G G C . n A 1 68 G 68 68 68 G G C . n A 1 69 G 69 69 69 G G C . n A 1 70 G 70 70 70 G G C . n A 1 71 A 71 71 71 A A C . n A 1 72 C 72 72 72 C C C . n A 1 73 G 73 73 73 G G C . n A 1 74 C 74 74 74 C C C . n A 1 75 C 75 75 ? ? ? C . n A 1 76 A 76 76 ? ? ? C . n B 1 1 G 1 1 ? ? ? D . n B 1 2 U 2 2 ? ? ? D . n B 1 3 C 3 3 3 C C D . n B 1 4 C 4 4 4 C C D . n B 1 5 C 5 5 5 C C D . n B 1 6 C 6 6 6 C C D . n B 1 7 U 7 7 7 U U D . n B 1 8 U 8 8 8 U U D . n B 1 9 C 9 9 9 C C D . n B 1 10 G 10 10 10 G G D . n B 1 11 U 11 11 11 U U D . n B 1 12 C 12 12 12 C C D . n B 1 13 U 13 13 13 U U D . n B 1 14 A 14 14 14 A A D . n B 1 15 G 15 15 15 G G D . n B 1 16 A 16 16 16 A A D . n B 1 17 G 17 17 17 G G D . n B 1 18 G 18 18 18 G G D . n B 1 19 C 19 19 19 C C D . n B 1 20 C 20 20 20 C C D . n B 1 21 C 21 20 20 C C D A n B 1 22 A 22 21 21 A A D . n B 1 23 G 23 22 22 G G D . n B 1 24 G 24 23 23 G G D . n B 1 25 A 25 24 24 A A D . n B 1 26 C 26 25 25 C C D . n B 1 27 A 27 26 26 A A D . n B 1 28 C 28 27 27 C C D . n B 1 29 C 29 28 28 C C D . n B 1 30 G 30 29 29 G G D . n B 1 31 C 31 30 30 C C D . n B 1 32 C 32 31 31 C C D . n B 1 33 C 33 32 32 C C D . n B 1 34 U 34 33 33 U U D . n B 1 35 U 35 34 34 U U D . n B 1 36 U 36 35 35 U U D . n B 1 37 C 37 36 36 C C D . n B 1 38 A 38 37 37 A A D . n B 1 39 C 39 38 38 C C D . n B 1 40 G 40 39 39 G G D . n B 1 41 G 41 40 40 G G D . n B 1 42 C 42 41 41 C C D . n B 1 43 G 43 42 42 G G D . n B 1 44 G 44 43 43 G G D . n B 1 45 U 45 44 44 U U D . n B 1 46 A 46 45 45 A A D . n B 1 47 A 47 46 46 A A D . n B 1 48 C 48 47 47 C C D . n B 1 49 A 49 49 49 A A D . n B 1 50 G 50 50 50 G G D . n B 1 51 G 51 51 51 G G D . n B 1 52 G 52 52 52 G G D . n B 1 53 G 53 53 53 G G D . n B 1 54 U 54 54 54 U U D . n B 1 55 U 55 55 55 U U D . n B 1 56 C 56 56 56 C C D . n B 1 57 G 57 57 57 G G D . n B 1 58 A 58 58 58 A A D . n B 1 59 A 59 59 59 A A D . n B 1 60 U 60 60 60 U U D . n B 1 61 C 61 61 61 C C D . n B 1 62 C 62 62 62 C C D . n B 1 63 C 63 63 63 C C D . n B 1 64 C 64 64 64 C C D . n B 1 65 U 65 65 65 U U D . n B 1 66 A 66 66 66 A A D . n B 1 67 G 67 67 67 G G D . n B 1 68 G 68 68 68 G G D . n B 1 69 G 69 69 69 G G D . n B 1 70 G 70 70 70 G G D . n B 1 71 A 71 71 71 A A D . n B 1 72 C 72 72 72 C C D . n B 1 73 G 73 73 73 G G D . n B 1 74 C 74 74 ? ? ? D . n B 1 75 C 75 75 ? ? ? D . n B 1 76 A 76 76 ? ? ? D . n C 2 1 MET 1 -11 ? ? ? A . n C 2 2 ARG 2 -10 ? ? ? A . n C 2 3 GLY 3 -9 ? ? ? A . n C 2 4 SER 4 -8 ? ? ? A . n C 2 5 HIS 5 -7 ? ? ? A . n C 2 6 HIS 6 -6 ? ? ? A . n C 2 7 HIS 7 -5 ? ? ? A . n C 2 8 HIS 8 -4 ? ? ? A . n C 2 9 HIS 9 -3 ? ? ? A . n C 2 10 HIS 10 -2 ? ? ? A . n C 2 11 GLY 11 -1 ? ? ? A . n C 2 12 SER 12 0 ? ? ? A . n C 2 13 MET 13 1 ? ? ? A . n C 2 14 SER 14 2 ? ? ? A . n C 2 15 GLU 15 3 ? ? ? A . n C 2 16 THR 16 4 ? ? ? A . n C 2 17 ALA 17 5 5 ALA ALA A . n C 2 18 LYS 18 6 6 LYS LYS A . n C 2 19 LYS 19 7 7 LYS LYS A . n C 2 20 VAL 20 8 8 VAL VAL A . n C 2 21 ILE 21 9 9 ILE ILE A . n C 2 22 VAL 22 10 10 VAL VAL A . n C 2 23 GLY 23 11 11 GLY GLY A . n C 2 24 MET 24 12 12 MET MET A . n C 2 25 SER 25 13 13 SER SER A . n C 2 26 GLY 26 14 14 GLY GLY A . n C 2 27 GLY 27 15 15 GLY GLY A . n C 2 28 VAL 28 16 16 VAL VAL A . n C 2 29 ASP 29 17 17 ASP ASP A . n C 2 30 SER 30 18 18 SER SER A . n C 2 31 SER 31 19 19 SER SER A . n C 2 32 VAL 32 20 20 VAL VAL A . n C 2 33 SER 33 21 21 SER SER A . n C 2 34 ALA 34 22 22 ALA ALA A . n C 2 35 TRP 35 23 23 TRP TRP A . n C 2 36 LEU 36 24 24 LEU LEU A . n C 2 37 LEU 37 25 25 LEU LEU A . n C 2 38 GLN 38 26 26 GLN GLN A . n C 2 39 GLN 39 27 27 GLN GLN A . n C 2 40 GLN 40 28 28 GLN GLN A . n C 2 41 GLY 41 29 29 GLY GLY A . n C 2 42 TYR 42 30 30 TYR TYR A . n C 2 43 GLN 43 31 31 GLN GLN A . n C 2 44 VAL 44 32 32 VAL VAL A . n C 2 45 GLU 45 33 33 GLU GLU A . n C 2 46 GLY 46 34 34 GLY GLY A . n C 2 47 LEU 47 35 35 LEU LEU A . n C 2 48 PHE 48 36 36 PHE PHE A . n C 2 49 MET 49 37 37 MET MET A . n C 2 50 LYS 50 38 38 LYS LYS A . n C 2 51 ASN 51 39 39 ASN ASN A . n C 2 52 TRP 52 40 40 TRP TRP A . n C 2 53 GLU 53 41 41 GLU GLU A . n C 2 54 GLU 54 42 42 GLU GLU A . n C 2 55 ASP 55 43 43 ASP ASP A . n C 2 56 ASP 56 44 44 ASP ASP A . n C 2 57 GLY 57 45 45 GLY GLY A . n C 2 58 GLU 58 46 46 GLU GLU A . n C 2 59 GLU 59 47 47 GLU GLU A . n C 2 60 TYR 60 48 48 TYR TYR A . n C 2 61 CYS 61 49 49 CYS CYS A . n C 2 62 THR 62 50 50 THR THR A . n C 2 63 ALA 63 51 51 ALA ALA A . n C 2 64 ALA 64 52 52 ALA ALA A . n C 2 65 ALA 65 53 53 ALA ALA A . n C 2 66 ASP 66 54 54 ASP ASP A . n C 2 67 LEU 67 55 55 LEU LEU A . n C 2 68 ALA 68 56 56 ALA ALA A . n C 2 69 ASP 69 57 57 ASP ASP A . n C 2 70 ALA 70 58 58 ALA ALA A . n C 2 71 GLN 71 59 59 GLN GLN A . n C 2 72 ALA 72 60 60 ALA ALA A . n C 2 73 VAL 73 61 61 VAL VAL A . n C 2 74 CYS 74 62 62 CYS CYS A . n C 2 75 ASP 75 63 63 ASP ASP A . n C 2 76 LYS 76 64 64 LYS LYS A . n C 2 77 LEU 77 65 65 LEU LEU A . n C 2 78 GLY 78 66 66 GLY GLY A . n C 2 79 ILE 79 67 67 ILE ILE A . n C 2 80 GLU 80 68 68 GLU GLU A . n C 2 81 LEU 81 69 69 LEU LEU A . n C 2 82 HIS 82 70 70 HIS HIS A . n C 2 83 THR 83 71 71 THR THR A . n C 2 84 VAL 84 72 72 VAL VAL A . n C 2 85 ASN 85 73 73 ASN ASN A . n C 2 86 PHE 86 74 74 PHE PHE A . n C 2 87 ALA 87 75 75 ALA ALA A . n C 2 88 ALA 88 76 76 ALA ALA A . n C 2 89 GLU 89 77 77 GLU GLU A . n C 2 90 TYR 90 78 78 TYR TYR A . n C 2 91 TRP 91 79 79 TRP TRP A . n C 2 92 ASP 92 80 80 ASP ASP A . n C 2 93 ASN 93 81 81 ASN ASN A . n C 2 94 VAL 94 82 82 VAL VAL A . n C 2 95 PHE 95 83 83 PHE PHE A . n C 2 96 GLU 96 84 84 GLU GLU A . n C 2 97 LEU 97 85 85 LEU LEU A . n C 2 98 PHE 98 86 86 PHE PHE A . n C 2 99 LEU 99 87 87 LEU LEU A . n C 2 100 ALA 100 88 88 ALA ALA A . n C 2 101 GLU 101 89 89 GLU GLU A . n C 2 102 TYR 102 90 90 TYR TYR A . n C 2 103 LYS 103 91 91 LYS LYS A . n C 2 104 ALA 104 92 92 ALA ALA A . n C 2 105 GLY 105 93 93 GLY GLY A . n C 2 106 ARG 106 94 94 ARG ARG A . n C 2 107 THR 107 95 95 THR THR A . n C 2 108 PRO 108 96 96 PRO PRO A . n C 2 109 ASN 109 97 97 ASN ASN A . n C 2 110 PRO 110 98 98 PRO PRO A . n C 2 111 ASP 111 99 99 ASP ASP A . n C 2 112 ILE 112 100 100 ILE ILE A . n C 2 113 LEU 113 101 101 LEU LEU A . n C 2 114 CYS 114 102 102 CYS CYS A . n C 2 115 ASN 115 103 103 ASN ASN A . n C 2 116 LYS 116 104 104 LYS LYS A . n C 2 117 GLU 117 105 105 GLU GLU A . n C 2 118 ILE 118 106 106 ILE ILE A . n C 2 119 LYS 119 107 107 LYS LYS A . n C 2 120 PHE 120 108 108 PHE PHE A . n C 2 121 LYS 121 109 109 LYS LYS A . n C 2 122 ALA 122 110 110 ALA ALA A . n C 2 123 PHE 123 111 111 PHE PHE A . n C 2 124 LEU 124 112 112 LEU LEU A . n C 2 125 GLU 125 113 113 GLU GLU A . n C 2 126 PHE 126 114 114 PHE PHE A . n C 2 127 ALA 127 115 115 ALA ALA A . n C 2 128 ALA 128 116 116 ALA ALA A . n C 2 129 GLU 129 117 117 GLU GLU A . n C 2 130 ASP 130 118 118 ASP ASP A . n C 2 131 LEU 131 119 119 LEU LEU A . n C 2 132 GLY 132 120 120 GLY GLY A . n C 2 133 ALA 133 121 121 ALA ALA A . n C 2 134 ASP 134 122 122 ASP ASP A . n C 2 135 TYR 135 123 123 TYR TYR A . n C 2 136 ILE 136 124 124 ILE ILE A . n C 2 137 ALA 137 125 125 ALA ALA A . n C 2 138 THR 138 126 126 THR THR A . n C 2 139 GLY 139 127 127 GLY GLY A . n C 2 140 HIS 140 128 128 HIS HIS A . n C 2 141 TYR 141 129 129 TYR TYR A . n C 2 142 VAL 142 130 130 VAL VAL A . n C 2 143 ARG 143 131 131 ARG ARG A . n C 2 144 ARG 144 132 132 ARG ARG A . n C 2 145 ALA 145 133 133 ALA ALA A . n C 2 146 ASP 146 134 134 ASP ASP A . n C 2 147 VAL 147 135 135 VAL VAL A . n C 2 148 ASP 148 136 136 ASP ASP A . n C 2 149 GLY 149 137 137 GLY GLY A . n C 2 150 LYS 150 138 138 LYS LYS A . n C 2 151 SER 151 139 139 SER SER A . n C 2 152 ARG 152 140 140 ARG ARG A . n C 2 153 LEU 153 141 141 LEU LEU A . n C 2 154 LEU 154 142 142 LEU LEU A . n C 2 155 ARG 155 143 143 ARG ARG A . n C 2 156 GLY 156 144 144 GLY GLY A . n C 2 157 LEU 157 145 145 LEU LEU A . n C 2 158 ASP 158 146 146 ASP ASP A . n C 2 159 SER 159 147 147 SER SER A . n C 2 160 ASN 160 148 148 ASN ASN A . n C 2 161 LYS 161 149 149 LYS LYS A . n C 2 162 ASP 162 150 150 ASP ASP A . n C 2 163 GLN 163 151 151 GLN GLN A . n C 2 164 SER 164 152 152 SER SER A . n C 2 165 TYR 165 153 153 TYR TYR A . n C 2 166 PHE 166 154 154 PHE PHE A . n C 2 167 LEU 167 155 155 LEU LEU A . n C 2 168 TYR 168 156 156 TYR TYR A . n C 2 169 THR 169 157 157 THR THR A . n C 2 170 LEU 170 158 158 LEU LEU A . n C 2 171 SER 171 159 159 SER SER A . n C 2 172 HIS 172 160 160 HIS HIS A . n C 2 173 GLU 173 161 161 GLU GLU A . n C 2 174 GLN 174 162 162 GLN GLN A . n C 2 175 ILE 175 163 163 ILE ILE A . n C 2 176 ALA 176 164 164 ALA ALA A . n C 2 177 GLN 177 165 165 GLN GLN A . n C 2 178 SER 178 166 166 SER SER A . n C 2 179 LEU 179 167 167 LEU LEU A . n C 2 180 PHE 180 168 168 PHE PHE A . n C 2 181 PRO 181 169 169 PRO PRO A . n C 2 182 VAL 182 170 170 VAL VAL A . n C 2 183 GLY 183 171 171 GLY GLY A . n C 2 184 GLU 184 172 172 GLU GLU A . n C 2 185 LEU 185 173 173 LEU LEU A . n C 2 186 GLU 186 174 174 GLU GLU A . n C 2 187 LYS 187 175 175 LYS LYS A . n C 2 188 PRO 188 176 176 PRO PRO A . n C 2 189 GLN 189 177 177 GLN GLN A . n C 2 190 VAL 190 178 178 VAL VAL A . n C 2 191 ARG 191 179 179 ARG ARG A . n C 2 192 LYS 192 180 180 LYS LYS A . n C 2 193 ILE 193 181 181 ILE ILE A . n C 2 194 ALA 194 182 182 ALA ALA A . n C 2 195 GLU 195 183 183 GLU GLU A . n C 2 196 ASP 196 184 184 ASP ASP A . n C 2 197 LEU 197 185 185 LEU LEU A . n C 2 198 GLY 198 186 186 GLY GLY A . n C 2 199 LEU 199 187 187 LEU LEU A . n C 2 200 VAL 200 188 188 VAL VAL A . n C 2 201 THR 201 189 ? ? ? A . n C 2 202 ALA 202 190 ? ? ? A . n C 2 203 LYS 203 191 ? ? ? A . n C 2 204 LYS 204 192 ? ? ? A . n C 2 205 LYS 205 193 ? ? ? A . n C 2 206 ASP 206 194 ? ? ? A . n C 2 207 SER 207 195 ? ? ? A . n C 2 208 THR 208 196 ? ? ? A . n C 2 209 GLY 209 197 ? ? ? A . n C 2 210 ILE 210 198 ? ? ? A . n C 2 211 CYS 211 199 ? ? ? A . n C 2 212 PHE 212 200 ? ? ? A . n C 2 213 ILE 213 201 ? ? ? A . n C 2 214 GLY 214 202 ? ? ? A . n C 2 215 GLU 215 203 ? ? ? A . n C 2 216 ARG 216 204 ? ? ? A . n C 2 217 LYS 217 205 205 LYS LYS A . n C 2 218 PHE 218 206 206 PHE PHE A . n C 2 219 ARG 219 207 207 ARG ARG A . n C 2 220 GLU 220 208 208 GLU GLU A . n C 2 221 PHE 221 209 209 PHE PHE A . n C 2 222 LEU 222 210 210 LEU LEU A . n C 2 223 GLY 223 211 211 GLY GLY A . n C 2 224 ARG 224 212 212 ARG ARG A . n C 2 225 TYR 225 213 213 TYR TYR A . n C 2 226 LEU 226 214 214 LEU LEU A . n C 2 227 PRO 227 215 215 PRO PRO A . n C 2 228 ALA 228 216 216 ALA ALA A . n C 2 229 GLN 229 217 217 GLN GLN A . n C 2 230 PRO 230 218 218 PRO PRO A . n C 2 231 GLY 231 219 219 GLY GLY A . n C 2 232 LYS 232 220 220 LYS LYS A . n C 2 233 ILE 233 221 221 ILE ILE A . n C 2 234 ILE 234 222 222 ILE ILE A . n C 2 235 THR 235 223 223 THR THR A . n C 2 236 VAL 236 224 224 VAL VAL A . n C 2 237 ASP 237 225 225 ASP ASP A . n C 2 238 GLY 238 226 226 GLY GLY A . n C 2 239 ASP 239 227 227 ASP ASP A . n C 2 240 GLU 240 228 228 GLU GLU A . n C 2 241 ILE 241 229 229 ILE ILE A . n C 2 242 GLY 242 230 230 GLY GLY A . n C 2 243 GLU 243 231 231 GLU GLU A . n C 2 244 HIS 244 232 232 HIS HIS A . n C 2 245 GLN 245 233 233 GLN GLN A . n C 2 246 GLY 246 234 234 GLY GLY A . n C 2 247 LEU 247 235 235 LEU LEU A . n C 2 248 MET 248 236 236 MET MET A . n C 2 249 TYR 249 237 237 TYR TYR A . n C 2 250 HIS 250 238 238 HIS HIS A . n C 2 251 THR 251 239 239 THR THR A . n C 2 252 LEU 252 240 240 LEU LEU A . n C 2 253 GLY 253 241 241 GLY GLY A . n C 2 254 GLN 254 242 242 GLN GLN A . n C 2 255 ARG 255 243 243 ARG ARG A . n C 2 256 LYS 256 244 244 LYS LYS A . n C 2 257 GLY 257 245 245 GLY GLY A . n C 2 258 LEU 258 246 246 LEU LEU A . n C 2 259 GLY 259 247 247 GLY GLY A . n C 2 260 ILE 260 248 248 ILE ILE A . n C 2 261 GLY 261 249 249 GLY GLY A . n C 2 262 GLY 262 250 250 GLY GLY A . n C 2 263 THR 263 251 251 THR THR A . n C 2 264 LYS 264 252 252 LYS LYS A . n C 2 265 GLU 265 253 253 GLU GLU A . n C 2 266 GLY 266 254 254 GLY GLY A . n C 2 267 THR 267 255 255 THR THR A . n C 2 268 GLU 268 256 256 GLU GLU A . n C 2 269 GLU 269 257 257 GLU GLU A . n C 2 270 PRO 270 258 258 PRO PRO A . n C 2 271 TRP 271 259 259 TRP TRP A . n C 2 272 TYR 272 260 260 TYR TYR A . n C 2 273 VAL 273 261 261 VAL VAL A . n C 2 274 VAL 274 262 262 VAL VAL A . n C 2 275 ASP 275 263 263 ASP ASP A . n C 2 276 LYS 276 264 264 LYS LYS A . n C 2 277 ASP 277 265 265 ASP ASP A . n C 2 278 VAL 278 266 266 VAL VAL A . n C 2 279 GLU 279 267 267 GLU GLU A . n C 2 280 ASN 280 268 268 ASN ASN A . n C 2 281 ASN 281 269 269 ASN ASN A . n C 2 282 ILE 282 270 270 ILE ILE A . n C 2 283 LEU 283 271 271 LEU LEU A . n C 2 284 VAL 284 272 272 VAL VAL A . n C 2 285 VAL 285 273 273 VAL VAL A . n C 2 286 ALA 286 274 274 ALA ALA A . n C 2 287 GLN 287 275 275 GLN GLN A . n C 2 288 GLY 288 276 276 GLY GLY A . n C 2 289 HIS 289 277 277 HIS HIS A . n C 2 290 GLU 290 278 278 GLU GLU A . n C 2 291 HIS 291 279 279 HIS HIS A . n C 2 292 PRO 292 280 280 PRO PRO A . n C 2 293 ARG 293 281 281 ARG ARG A . n C 2 294 LEU 294 282 282 LEU LEU A . n C 2 295 MET 295 283 283 MET MET A . n C 2 296 SER 296 284 284 SER SER A . n C 2 297 VAL 297 285 285 VAL VAL A . n C 2 298 GLY 298 286 286 GLY GLY A . n C 2 299 LEU 299 287 287 LEU LEU A . n C 2 300 ILE 300 288 288 ILE ILE A . n C 2 301 ALA 301 289 289 ALA ALA A . n C 2 302 GLN 302 290 290 GLN GLN A . n C 2 303 GLN 303 291 291 GLN GLN A . n C 2 304 LEU 304 292 292 LEU LEU A . n C 2 305 HIS 305 293 293 HIS HIS A . n C 2 306 TRP 306 294 294 TRP TRP A . n C 2 307 VAL 307 295 295 VAL VAL A . n C 2 308 ASP 308 296 296 ASP ASP A . n C 2 309 ARG 309 297 297 ARG ARG A . n C 2 310 GLU 310 298 298 GLU GLU A . n C 2 311 PRO 311 299 299 PRO PRO A . n C 2 312 PHE 312 300 300 PHE PHE A . n C 2 313 THR 313 301 301 THR THR A . n C 2 314 GLY 314 302 302 GLY GLY A . n C 2 315 THR 315 303 303 THR THR A . n C 2 316 MET 316 304 304 MET MET A . n C 2 317 ARG 317 305 305 ARG ARG A . n C 2 318 CYS 318 306 306 CYS CYS A . n C 2 319 THR 319 307 307 THR THR A . n C 2 320 VAL 320 308 308 VAL VAL A . n C 2 321 LYS 321 309 309 LYS LYS A . n C 2 322 THR 322 310 310 THR THR A . n C 2 323 ARG 323 311 311 ARG ARG A . n C 2 324 TYR 324 312 312 TYR TYR A . n C 2 325 ARG 325 313 313 ARG ARG A . n C 2 326 GLN 326 314 314 GLN GLN A . n C 2 327 THR 327 315 315 THR THR A . n C 2 328 ASP 328 316 316 ASP ASP A . n C 2 329 ILE 329 317 317 ILE ILE A . n C 2 330 PRO 330 318 318 PRO PRO A . n C 2 331 CYS 331 319 319 CYS CYS A . n C 2 332 THR 332 320 320 THR THR A . n C 2 333 VAL 333 321 321 VAL VAL A . n C 2 334 LYS 334 322 322 LYS LYS A . n C 2 335 ALA 335 323 323 ALA ALA A . n C 2 336 LEU 336 324 324 LEU LEU A . n C 2 337 ASP 337 325 325 ASP ASP A . n C 2 338 ASP 338 326 326 ASP ASP A . n C 2 339 ASP 339 327 327 ASP ASP A . n C 2 340 ARG 340 328 328 ARG ARG A . n C 2 341 ILE 341 329 329 ILE ILE A . n C 2 342 GLU 342 330 330 GLU GLU A . n C 2 343 VAL 343 331 331 VAL VAL A . n C 2 344 ILE 344 332 332 ILE ILE A . n C 2 345 PHE 345 333 333 PHE PHE A . n C 2 346 ASP 346 334 334 ASP ASP A . n C 2 347 GLU 347 335 335 GLU GLU A . n C 2 348 PRO 348 336 336 PRO PRO A . n C 2 349 VAL 349 337 337 VAL VAL A . n C 2 350 ALA 350 338 338 ALA ALA A . n C 2 351 ALA 351 339 339 ALA ALA A . n C 2 352 VAL 352 340 340 VAL VAL A . n C 2 353 THR 353 341 341 THR THR A . n C 2 354 PRO 354 342 342 PRO PRO A . n C 2 355 GLY 355 343 343 GLY GLY A . n C 2 356 GLN 356 344 344 GLN GLN A . n C 2 357 SER 357 345 345 SER SER A . n C 2 358 ALA 358 346 346 ALA ALA A . n C 2 359 VAL 359 347 347 VAL VAL A . n C 2 360 PHE 360 348 348 PHE PHE A . n C 2 361 TYR 361 349 349 TYR TYR A . n C 2 362 ASN 362 350 350 ASN ASN A . n C 2 363 GLY 363 351 351 GLY GLY A . n C 2 364 GLU 364 352 352 GLU GLU A . n C 2 365 VAL 365 353 353 VAL VAL A . n C 2 366 CYS 366 354 354 CYS CYS A . n C 2 367 LEU 367 355 355 LEU LEU A . n C 2 368 GLY 368 356 356 GLY GLY A . n C 2 369 GLY 369 357 357 GLY GLY A . n C 2 370 GLY 370 358 358 GLY GLY A . n C 2 371 ILE 371 359 359 ILE ILE A . n C 2 372 ILE 372 360 360 ILE ILE A . n C 2 373 GLU 373 361 361 GLU GLU A . n C 2 374 GLN 374 362 362 GLN GLN A . n C 2 375 ARG 375 363 363 ARG ARG A . n C 2 376 LEU 376 364 364 LEU LEU A . n C 2 377 PRO 377 365 365 PRO PRO A . n C 2 378 LEU 378 366 366 LEU LEU A . n C 2 379 PRO 379 367 367 PRO PRO A . n C 2 380 VAL 380 368 368 VAL VAL A . n D 2 1 MET 1 -11 ? ? ? B . n D 2 2 ARG 2 -10 ? ? ? B . n D 2 3 GLY 3 -9 ? ? ? B . n D 2 4 SER 4 -8 ? ? ? B . n D 2 5 HIS 5 -7 ? ? ? B . n D 2 6 HIS 6 -6 ? ? ? B . n D 2 7 HIS 7 -5 ? ? ? B . n D 2 8 HIS 8 -4 ? ? ? B . n D 2 9 HIS 9 -3 ? ? ? B . n D 2 10 HIS 10 -2 ? ? ? B . n D 2 11 GLY 11 -1 ? ? ? B . n D 2 12 SER 12 0 ? ? ? B . n D 2 13 MET 13 1 ? ? ? B . n D 2 14 SER 14 2 ? ? ? B . n D 2 15 GLU 15 3 ? ? ? B . n D 2 16 THR 16 4 4 THR THR B . n D 2 17 ALA 17 5 5 ALA ALA B . n D 2 18 LYS 18 6 6 LYS LYS B . n D 2 19 LYS 19 7 7 LYS LYS B . n D 2 20 VAL 20 8 8 VAL VAL B . n D 2 21 ILE 21 9 9 ILE ILE B . n D 2 22 VAL 22 10 10 VAL VAL B . n D 2 23 GLY 23 11 11 GLY GLY B . n D 2 24 MET 24 12 12 MET MET B . n D 2 25 SER 25 13 13 SER SER B . n D 2 26 GLY 26 14 14 GLY GLY B . n D 2 27 GLY 27 15 15 GLY GLY B . n D 2 28 VAL 28 16 16 VAL VAL B . n D 2 29 ASP 29 17 17 ASP ASP B . n D 2 30 SER 30 18 18 SER SER B . n D 2 31 SER 31 19 19 SER SER B . n D 2 32 VAL 32 20 20 VAL VAL B . n D 2 33 SER 33 21 21 SER SER B . n D 2 34 ALA 34 22 22 ALA ALA B . n D 2 35 TRP 35 23 23 TRP TRP B . n D 2 36 LEU 36 24 24 LEU LEU B . n D 2 37 LEU 37 25 25 LEU LEU B . n D 2 38 GLN 38 26 26 GLN GLN B . n D 2 39 GLN 39 27 27 GLN GLN B . n D 2 40 GLN 40 28 28 GLN GLN B . n D 2 41 GLY 41 29 29 GLY GLY B . n D 2 42 TYR 42 30 30 TYR TYR B . n D 2 43 GLN 43 31 31 GLN GLN B . n D 2 44 VAL 44 32 32 VAL VAL B . n D 2 45 GLU 45 33 33 GLU GLU B . n D 2 46 GLY 46 34 34 GLY GLY B . n D 2 47 LEU 47 35 35 LEU LEU B . n D 2 48 PHE 48 36 36 PHE PHE B . n D 2 49 MET 49 37 37 MET MET B . n D 2 50 LYS 50 38 38 LYS LYS B . n D 2 51 ASN 51 39 39 ASN ASN B . n D 2 52 TRP 52 40 40 TRP TRP B . n D 2 53 GLU 53 41 41 GLU GLU B . n D 2 54 GLU 54 42 42 GLU GLU B . n D 2 55 ASP 55 43 43 ASP ASP B . n D 2 56 ASP 56 44 44 ASP ASP B . n D 2 57 GLY 57 45 45 GLY GLY B . n D 2 58 GLU 58 46 46 GLU GLU B . n D 2 59 GLU 59 47 47 GLU GLU B . n D 2 60 TYR 60 48 48 TYR TYR B . n D 2 61 CYS 61 49 49 CYS CYS B . n D 2 62 THR 62 50 50 THR THR B . n D 2 63 ALA 63 51 51 ALA ALA B . n D 2 64 ALA 64 52 52 ALA ALA B . n D 2 65 ALA 65 53 53 ALA ALA B . n D 2 66 ASP 66 54 54 ASP ASP B . n D 2 67 LEU 67 55 55 LEU LEU B . n D 2 68 ALA 68 56 56 ALA ALA B . n D 2 69 ASP 69 57 57 ASP ASP B . n D 2 70 ALA 70 58 58 ALA ALA B . n D 2 71 GLN 71 59 59 GLN GLN B . n D 2 72 ALA 72 60 60 ALA ALA B . n D 2 73 VAL 73 61 61 VAL VAL B . n D 2 74 CYS 74 62 62 CYS CYS B . n D 2 75 ASP 75 63 63 ASP ASP B . n D 2 76 LYS 76 64 64 LYS LYS B . n D 2 77 LEU 77 65 65 LEU LEU B . n D 2 78 GLY 78 66 66 GLY GLY B . n D 2 79 ILE 79 67 67 ILE ILE B . n D 2 80 GLU 80 68 68 GLU GLU B . n D 2 81 LEU 81 69 69 LEU LEU B . n D 2 82 HIS 82 70 70 HIS HIS B . n D 2 83 THR 83 71 71 THR THR B . n D 2 84 VAL 84 72 72 VAL VAL B . n D 2 85 ASN 85 73 73 ASN ASN B . n D 2 86 PHE 86 74 74 PHE PHE B . n D 2 87 ALA 87 75 75 ALA ALA B . n D 2 88 ALA 88 76 76 ALA ALA B . n D 2 89 GLU 89 77 77 GLU GLU B . n D 2 90 TYR 90 78 78 TYR TYR B . n D 2 91 TRP 91 79 79 TRP TRP B . n D 2 92 ASP 92 80 80 ASP ASP B . n D 2 93 ASN 93 81 81 ASN ASN B . n D 2 94 VAL 94 82 82 VAL VAL B . n D 2 95 PHE 95 83 83 PHE PHE B . n D 2 96 GLU 96 84 84 GLU GLU B . n D 2 97 LEU 97 85 85 LEU LEU B . n D 2 98 PHE 98 86 86 PHE PHE B . n D 2 99 LEU 99 87 87 LEU LEU B . n D 2 100 ALA 100 88 88 ALA ALA B . n D 2 101 GLU 101 89 89 GLU GLU B . n D 2 102 TYR 102 90 90 TYR TYR B . n D 2 103 LYS 103 91 91 LYS LYS B . n D 2 104 ALA 104 92 92 ALA ALA B . n D 2 105 GLY 105 93 93 GLY GLY B . n D 2 106 ARG 106 94 94 ARG ARG B . n D 2 107 THR 107 95 95 THR THR B . n D 2 108 PRO 108 96 96 PRO PRO B . n D 2 109 ASN 109 97 97 ASN ASN B . n D 2 110 PRO 110 98 98 PRO PRO B . n D 2 111 ASP 111 99 99 ASP ASP B . n D 2 112 ILE 112 100 100 ILE ILE B . n D 2 113 LEU 113 101 101 LEU LEU B . n D 2 114 CYS 114 102 102 CYS CYS B . n D 2 115 ASN 115 103 103 ASN ASN B . n D 2 116 LYS 116 104 104 LYS LYS B . n D 2 117 GLU 117 105 105 GLU GLU B . n D 2 118 ILE 118 106 106 ILE ILE B . n D 2 119 LYS 119 107 107 LYS LYS B . n D 2 120 PHE 120 108 108 PHE PHE B . n D 2 121 LYS 121 109 109 LYS LYS B . n D 2 122 ALA 122 110 110 ALA ALA B . n D 2 123 PHE 123 111 111 PHE PHE B . n D 2 124 LEU 124 112 112 LEU LEU B . n D 2 125 GLU 125 113 113 GLU GLU B . n D 2 126 PHE 126 114 114 PHE PHE B . n D 2 127 ALA 127 115 115 ALA ALA B . n D 2 128 ALA 128 116 116 ALA ALA B . n D 2 129 GLU 129 117 117 GLU GLU B . n D 2 130 ASP 130 118 118 ASP ASP B . n D 2 131 LEU 131 119 119 LEU LEU B . n D 2 132 GLY 132 120 120 GLY GLY B . n D 2 133 ALA 133 121 121 ALA ALA B . n D 2 134 ASP 134 122 122 ASP ASP B . n D 2 135 TYR 135 123 123 TYR TYR B . n D 2 136 ILE 136 124 124 ILE ILE B . n D 2 137 ALA 137 125 125 ALA ALA B . n D 2 138 THR 138 126 126 THR THR B . n D 2 139 GLY 139 127 127 GLY GLY B . n D 2 140 HIS 140 128 128 HIS HIS B . n D 2 141 TYR 141 129 129 TYR TYR B . n D 2 142 VAL 142 130 130 VAL VAL B . n D 2 143 ARG 143 131 131 ARG ARG B . n D 2 144 ARG 144 132 132 ARG ARG B . n D 2 145 ALA 145 133 133 ALA ALA B . n D 2 146 ASP 146 134 134 ASP ASP B . n D 2 147 VAL 147 135 135 VAL VAL B . n D 2 148 ASP 148 136 136 ASP ASP B . n D 2 149 GLY 149 137 137 GLY GLY B . n D 2 150 LYS 150 138 138 LYS LYS B . n D 2 151 SER 151 139 139 SER SER B . n D 2 152 ARG 152 140 140 ARG ARG B . n D 2 153 LEU 153 141 141 LEU LEU B . n D 2 154 LEU 154 142 142 LEU LEU B . n D 2 155 ARG 155 143 143 ARG ARG B . n D 2 156 GLY 156 144 144 GLY GLY B . n D 2 157 LEU 157 145 145 LEU LEU B . n D 2 158 ASP 158 146 146 ASP ASP B . n D 2 159 SER 159 147 147 SER SER B . n D 2 160 ASN 160 148 148 ASN ASN B . n D 2 161 LYS 161 149 149 LYS LYS B . n D 2 162 ASP 162 150 150 ASP ASP B . n D 2 163 GLN 163 151 151 GLN GLN B . n D 2 164 SER 164 152 152 SER SER B . n D 2 165 TYR 165 153 153 TYR TYR B . n D 2 166 PHE 166 154 154 PHE PHE B . n D 2 167 LEU 167 155 155 LEU LEU B . n D 2 168 TYR 168 156 156 TYR TYR B . n D 2 169 THR 169 157 157 THR THR B . n D 2 170 LEU 170 158 158 LEU LEU B . n D 2 171 SER 171 159 159 SER SER B . n D 2 172 HIS 172 160 160 HIS HIS B . n D 2 173 GLU 173 161 161 GLU GLU B . n D 2 174 GLN 174 162 162 GLN GLN B . n D 2 175 ILE 175 163 163 ILE ILE B . n D 2 176 ALA 176 164 164 ALA ALA B . n D 2 177 GLN 177 165 165 GLN GLN B . n D 2 178 SER 178 166 166 SER SER B . n D 2 179 LEU 179 167 167 LEU LEU B . n D 2 180 PHE 180 168 168 PHE PHE B . n D 2 181 PRO 181 169 169 PRO PRO B . n D 2 182 VAL 182 170 170 VAL VAL B . n D 2 183 GLY 183 171 171 GLY GLY B . n D 2 184 GLU 184 172 172 GLU GLU B . n D 2 185 LEU 185 173 173 LEU LEU B . n D 2 186 GLU 186 174 174 GLU GLU B . n D 2 187 LYS 187 175 175 LYS LYS B . n D 2 188 PRO 188 176 176 PRO PRO B . n D 2 189 GLN 189 177 177 GLN GLN B . n D 2 190 VAL 190 178 178 VAL VAL B . n D 2 191 ARG 191 179 179 ARG ARG B . n D 2 192 LYS 192 180 180 LYS LYS B . n D 2 193 ILE 193 181 181 ILE ILE B . n D 2 194 ALA 194 182 182 ALA ALA B . n D 2 195 GLU 195 183 183 GLU GLU B . n D 2 196 ASP 196 184 184 ASP ASP B . n D 2 197 LEU 197 185 185 LEU LEU B . n D 2 198 GLY 198 186 186 GLY GLY B . n D 2 199 LEU 199 187 187 LEU LEU B . n D 2 200 VAL 200 188 188 VAL VAL B . n D 2 201 THR 201 189 189 THR THR B . n D 2 202 ALA 202 190 ? ? ? B . n D 2 203 LYS 203 191 ? ? ? B . n D 2 204 LYS 204 192 ? ? ? B . n D 2 205 LYS 205 193 ? ? ? B . n D 2 206 ASP 206 194 ? ? ? B . n D 2 207 SER 207 195 ? ? ? B . n D 2 208 THR 208 196 196 THR THR B . n D 2 209 GLY 209 197 197 GLY GLY B . n D 2 210 ILE 210 198 198 ILE ILE B . n D 2 211 CYS 211 199 199 CYS CYS B . n D 2 212 PHE 212 200 200 PHE PHE B . n D 2 213 ILE 213 201 201 ILE ILE B . n D 2 214 GLY 214 202 202 GLY GLY B . n D 2 215 GLU 215 203 203 GLU GLU B . n D 2 216 ARG 216 204 204 ARG ARG B . n D 2 217 LYS 217 205 205 LYS LYS B . n D 2 218 PHE 218 206 206 PHE PHE B . n D 2 219 ARG 219 207 207 ARG ARG B . n D 2 220 GLU 220 208 208 GLU GLU B . n D 2 221 PHE 221 209 209 PHE PHE B . n D 2 222 LEU 222 210 210 LEU LEU B . n D 2 223 GLY 223 211 211 GLY GLY B . n D 2 224 ARG 224 212 212 ARG ARG B . n D 2 225 TYR 225 213 213 TYR TYR B . n D 2 226 LEU 226 214 214 LEU LEU B . n D 2 227 PRO 227 215 215 PRO PRO B . n D 2 228 ALA 228 216 216 ALA ALA B . n D 2 229 GLN 229 217 217 GLN GLN B . n D 2 230 PRO 230 218 218 PRO PRO B . n D 2 231 GLY 231 219 219 GLY GLY B . n D 2 232 LYS 232 220 220 LYS LYS B . n D 2 233 ILE 233 221 221 ILE ILE B . n D 2 234 ILE 234 222 222 ILE ILE B . n D 2 235 THR 235 223 223 THR THR B . n D 2 236 VAL 236 224 224 VAL VAL B . n D 2 237 ASP 237 225 225 ASP ASP B . n D 2 238 GLY 238 226 226 GLY GLY B . n D 2 239 ASP 239 227 227 ASP ASP B . n D 2 240 GLU 240 228 228 GLU GLU B . n D 2 241 ILE 241 229 229 ILE ILE B . n D 2 242 GLY 242 230 230 GLY GLY B . n D 2 243 GLU 243 231 231 GLU GLU B . n D 2 244 HIS 244 232 232 HIS HIS B . n D 2 245 GLN 245 233 233 GLN GLN B . n D 2 246 GLY 246 234 234 GLY GLY B . n D 2 247 LEU 247 235 235 LEU LEU B . n D 2 248 MET 248 236 236 MET MET B . n D 2 249 TYR 249 237 237 TYR TYR B . n D 2 250 HIS 250 238 238 HIS HIS B . n D 2 251 THR 251 239 239 THR THR B . n D 2 252 LEU 252 240 240 LEU LEU B . n D 2 253 GLY 253 241 241 GLY GLY B . n D 2 254 GLN 254 242 242 GLN GLN B . n D 2 255 ARG 255 243 243 ARG ARG B . n D 2 256 LYS 256 244 244 LYS LYS B . n D 2 257 GLY 257 245 245 GLY GLY B . n D 2 258 LEU 258 246 246 LEU LEU B . n D 2 259 GLY 259 247 247 GLY GLY B . n D 2 260 ILE 260 248 248 ILE ILE B . n D 2 261 GLY 261 249 249 GLY GLY B . n D 2 262 GLY 262 250 250 GLY GLY B . n D 2 263 THR 263 251 251 THR THR B . n D 2 264 LYS 264 252 252 LYS LYS B . n D 2 265 GLU 265 253 253 GLU GLU B . n D 2 266 GLY 266 254 254 GLY GLY B . n D 2 267 THR 267 255 255 THR THR B . n D 2 268 GLU 268 256 256 GLU GLU B . n D 2 269 GLU 269 257 257 GLU GLU B . n D 2 270 PRO 270 258 258 PRO PRO B . n D 2 271 TRP 271 259 259 TRP TRP B . n D 2 272 TYR 272 260 260 TYR TYR B . n D 2 273 VAL 273 261 261 VAL VAL B . n D 2 274 VAL 274 262 262 VAL VAL B . n D 2 275 ASP 275 263 263 ASP ASP B . n D 2 276 LYS 276 264 264 LYS LYS B . n D 2 277 ASP 277 265 265 ASP ASP B . n D 2 278 VAL 278 266 266 VAL VAL B . n D 2 279 GLU 279 267 267 GLU GLU B . n D 2 280 ASN 280 268 268 ASN ASN B . n D 2 281 ASN 281 269 269 ASN ASN B . n D 2 282 ILE 282 270 270 ILE ILE B . n D 2 283 LEU 283 271 271 LEU LEU B . n D 2 284 VAL 284 272 272 VAL VAL B . n D 2 285 VAL 285 273 273 VAL VAL B . n D 2 286 ALA 286 274 274 ALA ALA B . n D 2 287 GLN 287 275 275 GLN GLN B . n D 2 288 GLY 288 276 276 GLY GLY B . n D 2 289 HIS 289 277 277 HIS HIS B . n D 2 290 GLU 290 278 278 GLU GLU B . n D 2 291 HIS 291 279 279 HIS HIS B . n D 2 292 PRO 292 280 280 PRO PRO B . n D 2 293 ARG 293 281 281 ARG ARG B . n D 2 294 LEU 294 282 282 LEU LEU B . n D 2 295 MET 295 283 283 MET MET B . n D 2 296 SER 296 284 284 SER SER B . n D 2 297 VAL 297 285 285 VAL VAL B . n D 2 298 GLY 298 286 286 GLY GLY B . n D 2 299 LEU 299 287 287 LEU LEU B . n D 2 300 ILE 300 288 288 ILE ILE B . n D 2 301 ALA 301 289 289 ALA ALA B . n D 2 302 GLN 302 290 290 GLN GLN B . n D 2 303 GLN 303 291 291 GLN GLN B . n D 2 304 LEU 304 292 292 LEU LEU B . n D 2 305 HIS 305 293 293 HIS HIS B . n D 2 306 TRP 306 294 294 TRP TRP B . n D 2 307 VAL 307 295 295 VAL VAL B . n D 2 308 ASP 308 296 296 ASP ASP B . n D 2 309 ARG 309 297 297 ARG ARG B . n D 2 310 GLU 310 298 298 GLU GLU B . n D 2 311 PRO 311 299 299 PRO PRO B . n D 2 312 PHE 312 300 300 PHE PHE B . n D 2 313 THR 313 301 301 THR THR B . n D 2 314 GLY 314 302 302 GLY GLY B . n D 2 315 THR 315 303 303 THR THR B . n D 2 316 MET 316 304 304 MET MET B . n D 2 317 ARG 317 305 305 ARG ARG B . n D 2 318 CYS 318 306 306 CYS CYS B . n D 2 319 THR 319 307 307 THR THR B . n D 2 320 VAL 320 308 308 VAL VAL B . n D 2 321 LYS 321 309 309 LYS LYS B . n D 2 322 THR 322 310 310 THR THR B . n D 2 323 ARG 323 311 311 ARG ARG B . n D 2 324 TYR 324 312 312 TYR TYR B . n D 2 325 ARG 325 313 313 ARG ARG B . n D 2 326 GLN 326 314 314 GLN GLN B . n D 2 327 THR 327 315 315 THR THR B . n D 2 328 ASP 328 316 316 ASP ASP B . n D 2 329 ILE 329 317 317 ILE ILE B . n D 2 330 PRO 330 318 318 PRO PRO B . n D 2 331 CYS 331 319 319 CYS CYS B . n D 2 332 THR 332 320 320 THR THR B . n D 2 333 VAL 333 321 321 VAL VAL B . n D 2 334 LYS 334 322 322 LYS LYS B . n D 2 335 ALA 335 323 323 ALA ALA B . n D 2 336 LEU 336 324 324 LEU LEU B . n D 2 337 ASP 337 325 325 ASP ASP B . n D 2 338 ASP 338 326 326 ASP ASP B . n D 2 339 ASP 339 327 327 ASP ASP B . n D 2 340 ARG 340 328 328 ARG ARG B . n D 2 341 ILE 341 329 329 ILE ILE B . n D 2 342 GLU 342 330 330 GLU GLU B . n D 2 343 VAL 343 331 331 VAL VAL B . n D 2 344 ILE 344 332 332 ILE ILE B . n D 2 345 PHE 345 333 333 PHE PHE B . n D 2 346 ASP 346 334 334 ASP ASP B . n D 2 347 GLU 347 335 335 GLU GLU B . n D 2 348 PRO 348 336 336 PRO PRO B . n D 2 349 VAL 349 337 337 VAL VAL B . n D 2 350 ALA 350 338 338 ALA ALA B . n D 2 351 ALA 351 339 339 ALA ALA B . n D 2 352 VAL 352 340 340 VAL VAL B . n D 2 353 THR 353 341 341 THR THR B . n D 2 354 PRO 354 342 342 PRO PRO B . n D 2 355 GLY 355 343 343 GLY GLY B . n D 2 356 GLN 356 344 344 GLN GLN B . n D 2 357 SER 357 345 345 SER SER B . n D 2 358 ALA 358 346 346 ALA ALA B . n D 2 359 VAL 359 347 347 VAL VAL B . n D 2 360 PHE 360 348 348 PHE PHE B . n D 2 361 TYR 361 349 349 TYR TYR B . n D 2 362 ASN 362 350 350 ASN ASN B . n D 2 363 GLY 363 351 351 GLY GLY B . n D 2 364 GLU 364 352 352 GLU GLU B . n D 2 365 VAL 365 353 353 VAL VAL B . n D 2 366 CYS 366 354 354 CYS CYS B . n D 2 367 LEU 367 355 355 LEU LEU B . n D 2 368 GLY 368 356 356 GLY GLY B . n D 2 369 GLY 369 357 357 GLY GLY B . n D 2 370 GLY 370 358 358 GLY GLY B . n D 2 371 ILE 371 359 359 ILE ILE B . n D 2 372 ILE 372 360 360 ILE ILE B . n D 2 373 GLU 373 361 361 GLU GLU B . n D 2 374 GLN 374 362 362 GLN GLN B . n D 2 375 ARG 375 363 363 ARG ARG B . n D 2 376 LEU 376 364 364 LEU LEU B . n D 2 377 PRO 377 365 365 PRO PRO B . n D 2 378 LEU 378 366 366 LEU LEU B . n D 2 379 PRO 379 367 367 PRO PRO B . n D 2 380 VAL 380 368 368 VAL VAL B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 PO4 1 1004 1004 PO4 PO4 C . F 3 PO4 1 1002 1002 PO4 PO4 A . G 4 SO4 1 2001 2001 SO4 SO4 A . H 4 SO4 1 2003 2003 SO4 SO4 A . I 4 SO4 1 2005 2005 SO4 SO4 A . J 3 PO4 1 1001 1001 PO4 PO4 B . K 3 PO4 1 1003 1003 PO4 PO4 B . L 4 SO4 1 2002 2002 SO4 SO4 B . M 4 SO4 1 2004 2004 SO4 SO4 B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 author_defined_assembly ? dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E,F,G,H,I 2 1 B,D,J,K,L,M # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-08-15 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_ref_seq_dif 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal _software.date _software.type _software.location _software.language HKL-2000 'data collection' . ? 1 ? ? ? ? SCALEPACK 'data scaling' . ? 2 ? ? ? ? CNS refinement . ? 3 ? ? ? ? HKL-2000 'data reduction' . ? 4 ? ? ? ? CNS phasing . ? 5 ? ? ? ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 "O2'" _pdbx_validate_close_contact.auth_asym_id_1 C _pdbx_validate_close_contact.auth_comp_id_1 A _pdbx_validate_close_contact.auth_seq_id_1 16 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 "O2'" _pdbx_validate_close_contact.auth_asym_id_2 C _pdbx_validate_close_contact.auth_comp_id_2 U _pdbx_validate_close_contact.auth_seq_id_2 60 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.15 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 C _pdbx_validate_rmsd_bond.auth_comp_id_1 G _pdbx_validate_rmsd_bond.auth_seq_id_1 1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 C _pdbx_validate_rmsd_bond.auth_comp_id_2 G _pdbx_validate_rmsd_bond.auth_seq_id_2 1 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.519 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.088 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N9 C G 18 ? ? "C1'" C G 18 ? ? "C2'" C G 18 ? ? 124.15 114.00 10.15 1.30 N 2 1 "C2'" C U 34 ? ? "C3'" C U 34 ? ? "O3'" C U 34 ? ? 127.23 113.70 13.53 1.60 N 3 1 N9 D G 18 ? ? "C1'" D G 18 ? ? "C2'" D G 18 ? ? 124.05 114.00 10.05 1.30 N 4 1 "C2'" D U 34 ? ? "C3'" D U 34 ? ? "O3'" D U 34 ? ? 127.48 113.70 13.78 1.60 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 6 ? ? -2.32 117.31 2 1 SER A 19 ? ? -61.20 -70.95 3 1 GLU A 42 ? ? -38.73 152.64 4 1 ASP A 43 ? ? -134.55 -33.79 5 1 CYS A 49 ? ? -57.37 13.87 6 1 THR A 50 ? ? -123.34 -60.09 7 1 ALA A 60 ? ? -31.54 -39.99 8 1 VAL A 82 ? ? -141.60 -26.57 9 1 ASN A 97 ? ? -109.92 79.01 10 1 ILE A 106 ? ? -90.63 -90.60 11 1 LYS A 107 ? ? -28.18 -37.53 12 1 LYS A 109 ? ? -156.24 -73.88 13 1 PHE A 114 ? ? -50.60 -77.37 14 1 ALA A 115 ? ? -32.10 -38.11 15 1 ASP A 118 ? ? -110.07 -83.44 16 1 LEU A 119 ? ? -48.92 3.13 17 1 ARG A 143 ? ? -69.06 -74.44 18 1 LEU A 145 ? ? -24.07 143.83 19 1 ASP A 146 ? ? 71.50 61.26 20 1 LEU A 158 ? ? -46.79 160.10 21 1 VAL A 178 ? ? -40.64 -75.08 22 1 LEU A 187 ? ? -118.78 -148.41 23 1 TYR A 213 ? ? -135.34 -55.24 24 1 ILE A 229 ? ? -162.03 -7.86 25 1 GLU A 231 ? ? -110.79 -159.88 26 1 HIS A 232 ? ? -123.96 -70.54 27 1 GLN A 233 ? ? 90.26 -1.58 28 1 ARG A 243 ? ? -90.60 -66.44 29 1 THR A 251 ? ? -149.67 -123.47 30 1 GLU A 253 ? ? 157.18 170.30 31 1 THR A 255 ? ? 53.20 17.28 32 1 GLU A 256 ? ? 66.59 -22.66 33 1 ALA A 274 ? ? -147.30 -158.50 34 1 HIS A 277 ? ? -52.89 2.09 35 1 VAL A 295 ? ? -28.97 -34.92 36 1 ARG A 297 ? ? 40.26 22.73 37 1 CYS A 306 ? ? -138.62 -148.09 38 1 ARG A 313 ? ? 60.94 -0.84 39 1 ALA A 323 ? ? -62.33 78.38 40 1 ASP A 325 ? ? 174.46 -173.76 41 1 ASP A 326 ? ? 8.44 -85.27 42 1 ALA A 338 ? ? -64.49 -129.74 43 1 LYS B 6 ? ? -31.13 126.33 44 1 ASN B 39 ? ? -104.60 -146.70 45 1 TRP B 40 ? ? -60.41 -161.28 46 1 GLU B 41 ? ? -130.81 -35.42 47 1 ASP B 43 ? ? -143.48 -139.55 48 1 GLU B 46 ? ? -63.87 34.33 49 1 GLU B 47 ? ? 88.10 17.17 50 1 TYR B 48 ? ? 28.48 54.49 51 1 CYS B 49 ? ? -60.70 17.32 52 1 PHE B 74 ? ? -12.72 135.98 53 1 ALA B 75 ? ? -67.29 41.74 54 1 ALA B 76 ? ? 61.15 -11.43 55 1 GLU B 77 ? ? -42.95 -19.61 56 1 TYR B 78 ? ? -61.83 -78.27 57 1 ASP B 80 ? ? -13.26 -58.33 58 1 ALA B 88 ? ? -39.95 -35.53 59 1 ASN B 97 ? ? -116.42 70.30 60 1 PRO B 98 ? ? -39.62 -23.97 61 1 ILE B 106 ? ? -94.56 -82.95 62 1 LYS B 109 ? ? -163.39 -68.28 63 1 PHE B 114 ? ? -58.86 -70.38 64 1 ALA B 116 ? ? -70.91 -71.71 65 1 ASP B 118 ? ? -102.13 -84.35 66 1 LEU B 119 ? ? -50.08 -0.88 67 1 LEU B 145 ? ? -33.69 158.90 68 1 VAL B 178 ? ? -45.18 -77.73 69 1 ASP B 184 ? ? -50.14 -5.89 70 1 CYS B 199 ? ? -61.11 1.04 71 1 TYR B 213 ? ? -63.27 -111.26 72 1 ILE B 229 ? ? -162.81 -4.86 73 1 GLU B 231 ? ? -113.22 -164.57 74 1 HIS B 232 ? ? -127.68 -70.12 75 1 GLN B 233 ? ? 90.87 -4.34 76 1 ARG B 243 ? ? -104.66 -60.59 77 1 THR B 251 ? ? -145.84 -130.05 78 1 GLU B 253 ? ? 158.68 175.82 79 1 THR B 255 ? ? 58.47 17.13 80 1 GLU B 256 ? ? 69.77 -17.14 81 1 HIS B 277 ? ? -51.23 -1.10 82 1 VAL B 295 ? ? -32.78 -26.81 83 1 ARG B 297 ? ? 33.01 23.26 84 1 CYS B 306 ? ? -150.62 -153.30 85 1 ARG B 313 ? ? 67.42 -8.24 86 1 ALA B 323 ? ? -66.05 94.26 87 1 ASP B 325 ? ? -172.32 -168.58 88 1 ASP B 326 ? ? -13.89 -69.09 89 1 ALA B 338 ? ? -55.82 -126.74 90 1 PRO B 365 ? ? -44.36 151.44 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 G C 17 ? ? 0.058 'SIDE CHAIN' 2 1 G C 18 ? ? 0.106 'SIDE CHAIN' 3 1 G D 17 ? ? 0.061 'SIDE CHAIN' 4 1 G D 18 ? ? 0.076 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 C C 75 ? A C 75 2 1 Y 1 C A 76 ? A A 76 3 1 Y 1 D G 1 ? B G 1 4 1 Y 1 D U 2 ? B U 2 5 1 Y 1 D C 74 ? B C 74 6 1 Y 1 D C 75 ? B C 75 7 1 Y 1 D A 76 ? B A 76 8 1 Y 1 A MET -11 ? C MET 1 9 1 Y 1 A ARG -10 ? C ARG 2 10 1 Y 1 A GLY -9 ? C GLY 3 11 1 Y 1 A SER -8 ? C SER 4 12 1 Y 1 A HIS -7 ? C HIS 5 13 1 Y 1 A HIS -6 ? C HIS 6 14 1 Y 1 A HIS -5 ? C HIS 7 15 1 Y 1 A HIS -4 ? C HIS 8 16 1 Y 1 A HIS -3 ? C HIS 9 17 1 Y 1 A HIS -2 ? C HIS 10 18 1 Y 1 A GLY -1 ? C GLY 11 19 1 Y 1 A SER 0 ? C SER 12 20 1 Y 1 A MET 1 ? C MET 13 21 1 Y 1 A SER 2 ? C SER 14 22 1 Y 1 A GLU 3 ? C GLU 15 23 1 Y 1 A THR 4 ? C THR 16 24 1 Y 1 A THR 189 ? C THR 201 25 1 Y 1 A ALA 190 ? C ALA 202 26 1 Y 1 A LYS 191 ? C LYS 203 27 1 Y 1 A LYS 192 ? C LYS 204 28 1 Y 1 A LYS 193 ? C LYS 205 29 1 Y 1 A ASP 194 ? C ASP 206 30 1 Y 1 A SER 195 ? C SER 207 31 1 Y 1 A THR 196 ? C THR 208 32 1 Y 1 A GLY 197 ? C GLY 209 33 1 Y 1 A ILE 198 ? C ILE 210 34 1 Y 1 A CYS 199 ? C CYS 211 35 1 Y 1 A PHE 200 ? C PHE 212 36 1 Y 1 A ILE 201 ? C ILE 213 37 1 Y 1 A GLY 202 ? C GLY 214 38 1 Y 1 A GLU 203 ? C GLU 215 39 1 Y 1 A ARG 204 ? C ARG 216 40 1 Y 1 B MET -11 ? D MET 1 41 1 Y 1 B ARG -10 ? D ARG 2 42 1 Y 1 B GLY -9 ? D GLY 3 43 1 Y 1 B SER -8 ? D SER 4 44 1 Y 1 B HIS -7 ? D HIS 5 45 1 Y 1 B HIS -6 ? D HIS 6 46 1 Y 1 B HIS -5 ? D HIS 7 47 1 Y 1 B HIS -4 ? D HIS 8 48 1 Y 1 B HIS -3 ? D HIS 9 49 1 Y 1 B HIS -2 ? D HIS 10 50 1 Y 1 B GLY -1 ? D GLY 11 51 1 Y 1 B SER 0 ? D SER 12 52 1 Y 1 B MET 1 ? D MET 13 53 1 Y 1 B SER 2 ? D SER 14 54 1 Y 1 B GLU 3 ? D GLU 15 55 1 Y 1 B ALA 190 ? D ALA 202 56 1 Y 1 B LYS 191 ? D LYS 203 57 1 Y 1 B LYS 192 ? D LYS 204 58 1 Y 1 B LYS 193 ? D LYS 205 59 1 Y 1 B ASP 194 ? D ASP 206 60 1 Y 1 B SER 195 ? D SER 207 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 G OP3 O N N 160 G P P N N 161 G OP1 O N N 162 G OP2 O N N 163 G "O5'" O N N 164 G "C5'" C N N 165 G "C4'" C N R 166 G "O4'" O N N 167 G "C3'" C N S 168 G "O3'" O N N 169 G "C2'" C N R 170 G "O2'" O N N 171 G "C1'" C N R 172 G N9 N Y N 173 G C8 C Y N 174 G N7 N Y N 175 G C5 C Y N 176 G C6 C N N 177 G O6 O N N 178 G N1 N N N 179 G C2 C N N 180 G N2 N N N 181 G N3 N N N 182 G C4 C Y N 183 G HOP3 H N N 184 G HOP2 H N N 185 G "H5'" H N N 186 G "H5''" H N N 187 G "H4'" H N N 188 G "H3'" H N N 189 G "HO3'" H N N 190 G "H2'" H N N 191 G "HO2'" H N N 192 G "H1'" H N N 193 G H8 H N N 194 G H1 H N N 195 G H21 H N N 196 G H22 H N N 197 GLN N N N N 198 GLN CA C N S 199 GLN C C N N 200 GLN O O N N 201 GLN CB C N N 202 GLN CG C N N 203 GLN CD C N N 204 GLN OE1 O N N 205 GLN NE2 N N N 206 GLN OXT O N N 207 GLN H H N N 208 GLN H2 H N N 209 GLN HA H N N 210 GLN HB2 H N N 211 GLN HB3 H N N 212 GLN HG2 H N N 213 GLN HG3 H N N 214 GLN HE21 H N N 215 GLN HE22 H N N 216 GLN HXT H N N 217 GLU N N N N 218 GLU CA C N S 219 GLU C C N N 220 GLU O O N N 221 GLU CB C N N 222 GLU CG C N N 223 GLU CD C N N 224 GLU OE1 O N N 225 GLU OE2 O N N 226 GLU OXT O N N 227 GLU H H N N 228 GLU H2 H N N 229 GLU HA H N N 230 GLU HB2 H N N 231 GLU HB3 H N N 232 GLU HG2 H N N 233 GLU HG3 H N N 234 GLU HE2 H N N 235 GLU HXT H N N 236 GLY N N N N 237 GLY CA C N N 238 GLY C C N N 239 GLY O O N N 240 GLY OXT O N N 241 GLY H H N N 242 GLY H2 H N N 243 GLY HA2 H N N 244 GLY HA3 H N N 245 GLY HXT H N N 246 HIS N N N N 247 HIS CA C N S 248 HIS C C N N 249 HIS O O N N 250 HIS CB C N N 251 HIS CG C Y N 252 HIS ND1 N Y N 253 HIS CD2 C Y N 254 HIS CE1 C Y N 255 HIS NE2 N Y N 256 HIS OXT O N N 257 HIS H H N N 258 HIS H2 H N N 259 HIS HA H N N 260 HIS HB2 H N N 261 HIS HB3 H N N 262 HIS HD1 H N N 263 HIS HD2 H N N 264 HIS HE1 H N N 265 HIS HE2 H N N 266 HIS HXT H N N 267 ILE N N N N 268 ILE CA C N S 269 ILE C C N N 270 ILE O O N N 271 ILE CB C N S 272 ILE CG1 C N N 273 ILE CG2 C N N 274 ILE CD1 C N N 275 ILE OXT O N N 276 ILE H H N N 277 ILE H2 H N N 278 ILE HA H N N 279 ILE HB H N N 280 ILE HG12 H N N 281 ILE HG13 H N N 282 ILE HG21 H N N 283 ILE HG22 H N N 284 ILE HG23 H N N 285 ILE HD11 H N N 286 ILE HD12 H N N 287 ILE HD13 H N N 288 ILE HXT H N N 289 LEU N N N N 290 LEU CA C N S 291 LEU C C N N 292 LEU O O N N 293 LEU CB C N N 294 LEU CG C N N 295 LEU CD1 C N N 296 LEU CD2 C N N 297 LEU OXT O N N 298 LEU H H N N 299 LEU H2 H N N 300 LEU HA H N N 301 LEU HB2 H N N 302 LEU HB3 H N N 303 LEU HG H N N 304 LEU HD11 H N N 305 LEU HD12 H N N 306 LEU HD13 H N N 307 LEU HD21 H N N 308 LEU HD22 H N N 309 LEU HD23 H N N 310 LEU HXT H N N 311 LYS N N N N 312 LYS CA C N S 313 LYS C C N N 314 LYS O O N N 315 LYS CB C N N 316 LYS CG C N N 317 LYS CD C N N 318 LYS CE C N N 319 LYS NZ N N N 320 LYS OXT O N N 321 LYS H H N N 322 LYS H2 H N N 323 LYS HA H N N 324 LYS HB2 H N N 325 LYS HB3 H N N 326 LYS HG2 H N N 327 LYS HG3 H N N 328 LYS HD2 H N N 329 LYS HD3 H N N 330 LYS HE2 H N N 331 LYS HE3 H N N 332 LYS HZ1 H N N 333 LYS HZ2 H N N 334 LYS HZ3 H N N 335 LYS HXT H N N 336 MET N N N N 337 MET CA C N S 338 MET C C N N 339 MET O O N N 340 MET CB C N N 341 MET CG C N N 342 MET SD S N N 343 MET CE C N N 344 MET OXT O N N 345 MET H H N N 346 MET H2 H N N 347 MET HA H N N 348 MET HB2 H N N 349 MET HB3 H N N 350 MET HG2 H N N 351 MET HG3 H N N 352 MET HE1 H N N 353 MET HE2 H N N 354 MET HE3 H N N 355 MET HXT H N N 356 PHE N N N N 357 PHE CA C N S 358 PHE C C N N 359 PHE O O N N 360 PHE CB C N N 361 PHE CG C Y N 362 PHE CD1 C Y N 363 PHE CD2 C Y N 364 PHE CE1 C Y N 365 PHE CE2 C Y N 366 PHE CZ C Y N 367 PHE OXT O N N 368 PHE H H N N 369 PHE H2 H N N 370 PHE HA H N N 371 PHE HB2 H N N 372 PHE HB3 H N N 373 PHE HD1 H N N 374 PHE HD2 H N N 375 PHE HE1 H N N 376 PHE HE2 H N N 377 PHE HZ H N N 378 PHE HXT H N N 379 PO4 P P N N 380 PO4 O1 O N N 381 PO4 O2 O N N 382 PO4 O3 O N N 383 PO4 O4 O N N 384 PRO N N N N 385 PRO CA C N S 386 PRO C C N N 387 PRO O O N N 388 PRO CB C N N 389 PRO CG C N N 390 PRO CD C N N 391 PRO OXT O N N 392 PRO H H N N 393 PRO HA H N N 394 PRO HB2 H N N 395 PRO HB3 H N N 396 PRO HG2 H N N 397 PRO HG3 H N N 398 PRO HD2 H N N 399 PRO HD3 H N N 400 PRO HXT H N N 401 SER N N N N 402 SER CA C N S 403 SER C C N N 404 SER O O N N 405 SER CB C N N 406 SER OG O N N 407 SER OXT O N N 408 SER H H N N 409 SER H2 H N N 410 SER HA H N N 411 SER HB2 H N N 412 SER HB3 H N N 413 SER HG H N N 414 SER HXT H N N 415 SO4 S S N N 416 SO4 O1 O N N 417 SO4 O2 O N N 418 SO4 O3 O N N 419 SO4 O4 O N N 420 THR N N N N 421 THR CA C N S 422 THR C C N N 423 THR O O N N 424 THR CB C N R 425 THR OG1 O N N 426 THR CG2 C N N 427 THR OXT O N N 428 THR H H N N 429 THR H2 H N N 430 THR HA H N N 431 THR HB H N N 432 THR HG1 H N N 433 THR HG21 H N N 434 THR HG22 H N N 435 THR HG23 H N N 436 THR HXT H N N 437 TRP N N N N 438 TRP CA C N S 439 TRP C C N N 440 TRP O O N N 441 TRP CB C N N 442 TRP CG C Y N 443 TRP CD1 C Y N 444 TRP CD2 C Y N 445 TRP NE1 N Y N 446 TRP CE2 C Y N 447 TRP CE3 C Y N 448 TRP CZ2 C Y N 449 TRP CZ3 C Y N 450 TRP CH2 C Y N 451 TRP OXT O N N 452 TRP H H N N 453 TRP H2 H N N 454 TRP HA H N N 455 TRP HB2 H N N 456 TRP HB3 H N N 457 TRP HD1 H N N 458 TRP HE1 H N N 459 TRP HE3 H N N 460 TRP HZ2 H N N 461 TRP HZ3 H N N 462 TRP HH2 H N N 463 TRP HXT H N N 464 TYR N N N N 465 TYR CA C N S 466 TYR C C N N 467 TYR O O N N 468 TYR CB C N N 469 TYR CG C Y N 470 TYR CD1 C Y N 471 TYR CD2 C Y N 472 TYR CE1 C Y N 473 TYR CE2 C Y N 474 TYR CZ C Y N 475 TYR OH O N N 476 TYR OXT O N N 477 TYR H H N N 478 TYR H2 H N N 479 TYR HA H N N 480 TYR HB2 H N N 481 TYR HB3 H N N 482 TYR HD1 H N N 483 TYR HD2 H N N 484 TYR HE1 H N N 485 TYR HE2 H N N 486 TYR HH H N N 487 TYR HXT H N N 488 U OP3 O N N 489 U P P N N 490 U OP1 O N N 491 U OP2 O N N 492 U "O5'" O N N 493 U "C5'" C N N 494 U "C4'" C N R 495 U "O4'" O N N 496 U "C3'" C N S 497 U "O3'" O N N 498 U "C2'" C N R 499 U "O2'" O N N 500 U "C1'" C N R 501 U N1 N N N 502 U C2 C N N 503 U O2 O N N 504 U N3 N N N 505 U C4 C N N 506 U O4 O N N 507 U C5 C N N 508 U C6 C N N 509 U HOP3 H N N 510 U HOP2 H N N 511 U "H5'" H N N 512 U "H5''" H N N 513 U "H4'" H N N 514 U "H3'" H N N 515 U "HO3'" H N N 516 U "H2'" H N N 517 U "HO2'" H N N 518 U "H1'" H N N 519 U H3 H N N 520 U H5 H N N 521 U H6 H N N 522 VAL N N N N 523 VAL CA C N S 524 VAL C C N N 525 VAL O O N N 526 VAL CB C N N 527 VAL CG1 C N N 528 VAL CG2 C N N 529 VAL OXT O N N 530 VAL H H N N 531 VAL H2 H N N 532 VAL HA H N N 533 VAL HB H N N 534 VAL HG11 H N N 535 VAL HG12 H N N 536 VAL HG13 H N N 537 VAL HG21 H N N 538 VAL HG22 H N N 539 VAL HG23 H N N 540 VAL HXT H N N 541 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 G OP3 P sing N N 158 G OP3 HOP3 sing N N 159 G P OP1 doub N N 160 G P OP2 sing N N 161 G P "O5'" sing N N 162 G OP2 HOP2 sing N N 163 G "O5'" "C5'" sing N N 164 G "C5'" "C4'" sing N N 165 G "C5'" "H5'" sing N N 166 G "C5'" "H5''" sing N N 167 G "C4'" "O4'" sing N N 168 G "C4'" "C3'" sing N N 169 G "C4'" "H4'" sing N N 170 G "O4'" "C1'" sing N N 171 G "C3'" "O3'" sing N N 172 G "C3'" "C2'" sing N N 173 G "C3'" "H3'" sing N N 174 G "O3'" "HO3'" sing N N 175 G "C2'" "O2'" sing N N 176 G "C2'" "C1'" sing N N 177 G "C2'" "H2'" sing N N 178 G "O2'" "HO2'" sing N N 179 G "C1'" N9 sing N N 180 G "C1'" "H1'" sing N N 181 G N9 C8 sing Y N 182 G N9 C4 sing Y N 183 G C8 N7 doub Y N 184 G C8 H8 sing N N 185 G N7 C5 sing Y N 186 G C5 C6 sing N N 187 G C5 C4 doub Y N 188 G C6 O6 doub N N 189 G C6 N1 sing N N 190 G N1 C2 sing N N 191 G N1 H1 sing N N 192 G C2 N2 sing N N 193 G C2 N3 doub N N 194 G N2 H21 sing N N 195 G N2 H22 sing N N 196 G N3 C4 sing N N 197 GLN N CA sing N N 198 GLN N H sing N N 199 GLN N H2 sing N N 200 GLN CA C sing N N 201 GLN CA CB sing N N 202 GLN CA HA sing N N 203 GLN C O doub N N 204 GLN C OXT sing N N 205 GLN CB CG sing N N 206 GLN CB HB2 sing N N 207 GLN CB HB3 sing N N 208 GLN CG CD sing N N 209 GLN CG HG2 sing N N 210 GLN CG HG3 sing N N 211 GLN CD OE1 doub N N 212 GLN CD NE2 sing N N 213 GLN NE2 HE21 sing N N 214 GLN NE2 HE22 sing N N 215 GLN OXT HXT sing N N 216 GLU N CA sing N N 217 GLU N H sing N N 218 GLU N H2 sing N N 219 GLU CA C sing N N 220 GLU CA CB sing N N 221 GLU CA HA sing N N 222 GLU C O doub N N 223 GLU C OXT sing N N 224 GLU CB CG sing N N 225 GLU CB HB2 sing N N 226 GLU CB HB3 sing N N 227 GLU CG CD sing N N 228 GLU CG HG2 sing N N 229 GLU CG HG3 sing N N 230 GLU CD OE1 doub N N 231 GLU CD OE2 sing N N 232 GLU OE2 HE2 sing N N 233 GLU OXT HXT sing N N 234 GLY N CA sing N N 235 GLY N H sing N N 236 GLY N H2 sing N N 237 GLY CA C sing N N 238 GLY CA HA2 sing N N 239 GLY CA HA3 sing N N 240 GLY C O doub N N 241 GLY C OXT sing N N 242 GLY OXT HXT sing N N 243 HIS N CA sing N N 244 HIS N H sing N N 245 HIS N H2 sing N N 246 HIS CA C sing N N 247 HIS CA CB sing N N 248 HIS CA HA sing N N 249 HIS C O doub N N 250 HIS C OXT sing N N 251 HIS CB CG sing N N 252 HIS CB HB2 sing N N 253 HIS CB HB3 sing N N 254 HIS CG ND1 sing Y N 255 HIS CG CD2 doub Y N 256 HIS ND1 CE1 doub Y N 257 HIS ND1 HD1 sing N N 258 HIS CD2 NE2 sing Y N 259 HIS CD2 HD2 sing N N 260 HIS CE1 NE2 sing Y N 261 HIS CE1 HE1 sing N N 262 HIS NE2 HE2 sing N N 263 HIS OXT HXT sing N N 264 ILE N CA sing N N 265 ILE N H sing N N 266 ILE N H2 sing N N 267 ILE CA C sing N N 268 ILE CA CB sing N N 269 ILE CA HA sing N N 270 ILE C O doub N N 271 ILE C OXT sing N N 272 ILE CB CG1 sing N N 273 ILE CB CG2 sing N N 274 ILE CB HB sing N N 275 ILE CG1 CD1 sing N N 276 ILE CG1 HG12 sing N N 277 ILE CG1 HG13 sing N N 278 ILE CG2 HG21 sing N N 279 ILE CG2 HG22 sing N N 280 ILE CG2 HG23 sing N N 281 ILE CD1 HD11 sing N N 282 ILE CD1 HD12 sing N N 283 ILE CD1 HD13 sing N N 284 ILE OXT HXT sing N N 285 LEU N CA sing N N 286 LEU N H sing N N 287 LEU N H2 sing N N 288 LEU CA C sing N N 289 LEU CA CB sing N N 290 LEU CA HA sing N N 291 LEU C O doub N N 292 LEU C OXT sing N N 293 LEU CB CG sing N N 294 LEU CB HB2 sing N N 295 LEU CB HB3 sing N N 296 LEU CG CD1 sing N N 297 LEU CG CD2 sing N N 298 LEU CG HG sing N N 299 LEU CD1 HD11 sing N N 300 LEU CD1 HD12 sing N N 301 LEU CD1 HD13 sing N N 302 LEU CD2 HD21 sing N N 303 LEU CD2 HD22 sing N N 304 LEU CD2 HD23 sing N N 305 LEU OXT HXT sing N N 306 LYS N CA sing N N 307 LYS N H sing N N 308 LYS N H2 sing N N 309 LYS CA C sing N N 310 LYS CA CB sing N N 311 LYS CA HA sing N N 312 LYS C O doub N N 313 LYS C OXT sing N N 314 LYS CB CG sing N N 315 LYS CB HB2 sing N N 316 LYS CB HB3 sing N N 317 LYS CG CD sing N N 318 LYS CG HG2 sing N N 319 LYS CG HG3 sing N N 320 LYS CD CE sing N N 321 LYS CD HD2 sing N N 322 LYS CD HD3 sing N N 323 LYS CE NZ sing N N 324 LYS CE HE2 sing N N 325 LYS CE HE3 sing N N 326 LYS NZ HZ1 sing N N 327 LYS NZ HZ2 sing N N 328 LYS NZ HZ3 sing N N 329 LYS OXT HXT sing N N 330 MET N CA sing N N 331 MET N H sing N N 332 MET N H2 sing N N 333 MET CA C sing N N 334 MET CA CB sing N N 335 MET CA HA sing N N 336 MET C O doub N N 337 MET C OXT sing N N 338 MET CB CG sing N N 339 MET CB HB2 sing N N 340 MET CB HB3 sing N N 341 MET CG SD sing N N 342 MET CG HG2 sing N N 343 MET CG HG3 sing N N 344 MET SD CE sing N N 345 MET CE HE1 sing N N 346 MET CE HE2 sing N N 347 MET CE HE3 sing N N 348 MET OXT HXT sing N N 349 PHE N CA sing N N 350 PHE N H sing N N 351 PHE N H2 sing N N 352 PHE CA C sing N N 353 PHE CA CB sing N N 354 PHE CA HA sing N N 355 PHE C O doub N N 356 PHE C OXT sing N N 357 PHE CB CG sing N N 358 PHE CB HB2 sing N N 359 PHE CB HB3 sing N N 360 PHE CG CD1 doub Y N 361 PHE CG CD2 sing Y N 362 PHE CD1 CE1 sing Y N 363 PHE CD1 HD1 sing N N 364 PHE CD2 CE2 doub Y N 365 PHE CD2 HD2 sing N N 366 PHE CE1 CZ doub Y N 367 PHE CE1 HE1 sing N N 368 PHE CE2 CZ sing Y N 369 PHE CE2 HE2 sing N N 370 PHE CZ HZ sing N N 371 PHE OXT HXT sing N N 372 PO4 P O1 doub N N 373 PO4 P O2 sing N N 374 PO4 P O3 sing N N 375 PO4 P O4 sing N N 376 PRO N CA sing N N 377 PRO N CD sing N N 378 PRO N H sing N N 379 PRO CA C sing N N 380 PRO CA CB sing N N 381 PRO CA HA sing N N 382 PRO C O doub N N 383 PRO C OXT sing N N 384 PRO CB CG sing N N 385 PRO CB HB2 sing N N 386 PRO CB HB3 sing N N 387 PRO CG CD sing N N 388 PRO CG HG2 sing N N 389 PRO CG HG3 sing N N 390 PRO CD HD2 sing N N 391 PRO CD HD3 sing N N 392 PRO OXT HXT sing N N 393 SER N CA sing N N 394 SER N H sing N N 395 SER N H2 sing N N 396 SER CA C sing N N 397 SER CA CB sing N N 398 SER CA HA sing N N 399 SER C O doub N N 400 SER C OXT sing N N 401 SER CB OG sing N N 402 SER CB HB2 sing N N 403 SER CB HB3 sing N N 404 SER OG HG sing N N 405 SER OXT HXT sing N N 406 SO4 S O1 doub N N 407 SO4 S O2 doub N N 408 SO4 S O3 sing N N 409 SO4 S O4 sing N N 410 THR N CA sing N N 411 THR N H sing N N 412 THR N H2 sing N N 413 THR CA C sing N N 414 THR CA CB sing N N 415 THR CA HA sing N N 416 THR C O doub N N 417 THR C OXT sing N N 418 THR CB OG1 sing N N 419 THR CB CG2 sing N N 420 THR CB HB sing N N 421 THR OG1 HG1 sing N N 422 THR CG2 HG21 sing N N 423 THR CG2 HG22 sing N N 424 THR CG2 HG23 sing N N 425 THR OXT HXT sing N N 426 TRP N CA sing N N 427 TRP N H sing N N 428 TRP N H2 sing N N 429 TRP CA C sing N N 430 TRP CA CB sing N N 431 TRP CA HA sing N N 432 TRP C O doub N N 433 TRP C OXT sing N N 434 TRP CB CG sing N N 435 TRP CB HB2 sing N N 436 TRP CB HB3 sing N N 437 TRP CG CD1 doub Y N 438 TRP CG CD2 sing Y N 439 TRP CD1 NE1 sing Y N 440 TRP CD1 HD1 sing N N 441 TRP CD2 CE2 doub Y N 442 TRP CD2 CE3 sing Y N 443 TRP NE1 CE2 sing Y N 444 TRP NE1 HE1 sing N N 445 TRP CE2 CZ2 sing Y N 446 TRP CE3 CZ3 doub Y N 447 TRP CE3 HE3 sing N N 448 TRP CZ2 CH2 doub Y N 449 TRP CZ2 HZ2 sing N N 450 TRP CZ3 CH2 sing Y N 451 TRP CZ3 HZ3 sing N N 452 TRP CH2 HH2 sing N N 453 TRP OXT HXT sing N N 454 TYR N CA sing N N 455 TYR N H sing N N 456 TYR N H2 sing N N 457 TYR CA C sing N N 458 TYR CA CB sing N N 459 TYR CA HA sing N N 460 TYR C O doub N N 461 TYR C OXT sing N N 462 TYR CB CG sing N N 463 TYR CB HB2 sing N N 464 TYR CB HB3 sing N N 465 TYR CG CD1 doub Y N 466 TYR CG CD2 sing Y N 467 TYR CD1 CE1 sing Y N 468 TYR CD1 HD1 sing N N 469 TYR CD2 CE2 doub Y N 470 TYR CD2 HD2 sing N N 471 TYR CE1 CZ doub Y N 472 TYR CE1 HE1 sing N N 473 TYR CE2 CZ sing Y N 474 TYR CE2 HE2 sing N N 475 TYR CZ OH sing N N 476 TYR OH HH sing N N 477 TYR OXT HXT sing N N 478 U OP3 P sing N N 479 U OP3 HOP3 sing N N 480 U P OP1 doub N N 481 U P OP2 sing N N 482 U P "O5'" sing N N 483 U OP2 HOP2 sing N N 484 U "O5'" "C5'" sing N N 485 U "C5'" "C4'" sing N N 486 U "C5'" "H5'" sing N N 487 U "C5'" "H5''" sing N N 488 U "C4'" "O4'" sing N N 489 U "C4'" "C3'" sing N N 490 U "C4'" "H4'" sing N N 491 U "O4'" "C1'" sing N N 492 U "C3'" "O3'" sing N N 493 U "C3'" "C2'" sing N N 494 U "C3'" "H3'" sing N N 495 U "O3'" "HO3'" sing N N 496 U "C2'" "O2'" sing N N 497 U "C2'" "C1'" sing N N 498 U "C2'" "H2'" sing N N 499 U "O2'" "HO2'" sing N N 500 U "C1'" N1 sing N N 501 U "C1'" "H1'" sing N N 502 U N1 C2 sing N N 503 U N1 C6 sing N N 504 U C2 O2 doub N N 505 U C2 N3 sing N N 506 U N3 C4 sing N N 507 U N3 H3 sing N N 508 U C4 O4 doub N N 509 U C4 C5 sing N N 510 U C5 C6 doub N N 511 U C5 H5 sing N N 512 U C6 H6 sing N N 513 VAL N CA sing N N 514 VAL N H sing N N 515 VAL N H2 sing N N 516 VAL CA C sing N N 517 VAL CA CB sing N N 518 VAL CA HA sing N N 519 VAL C O doub N N 520 VAL C OXT sing N N 521 VAL CB CG1 sing N N 522 VAL CB CG2 sing N N 523 VAL CB HB sing N N 524 VAL CG1 HG11 sing N N 525 VAL CG1 HG12 sing N N 526 VAL CG1 HG13 sing N N 527 VAL CG2 HG21 sing N N 528 VAL CG2 HG22 sing N N 529 VAL CG2 HG23 sing N N 530 VAL OXT HXT sing N N 531 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2DER 'double helix' 2DER 'a-form double helix' 2DER 'parallel strands' 2DER 'hairpin loop' 2DER 'mismatched base pair' 2DER 'four-way junction' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A U 2 1_555 A C 72 1_555 2.756 -2.174 -1.518 31.744 19.239 -11.598 1 C_U2:C72_C C 2 ? C 72 ? ? ? 1 A C 5 1_555 A G 68 1_555 -0.223 -1.139 -1.723 -16.019 24.669 -21.897 2 C_C5:G68_C C 5 ? C 68 ? 19 1 1 A U 7 1_555 A A 66 1_555 0.946 -0.547 0.468 10.684 -15.522 -2.959 3 C_U7:A66_C C 7 ? C 66 ? 20 1 1 A A 49 1_555 A U 65 1_555 -0.061 0.523 0.313 1.451 2.274 3.477 4 C_A49:U65_C C 49 ? C 65 ? ? ? 1 A G 50 1_555 A C 64 1_555 1.042 -0.134 -1.315 -8.297 -11.294 -12.028 5 C_G50:C64_C C 50 ? C 64 ? ? 1 1 A G 51 1_555 A C 63 1_555 -1.173 0.069 0.101 -7.348 -21.372 17.446 6 C_G51:C63_C C 51 ? C 63 ? ? 1 1 A G 52 1_555 A C 62 1_555 -2.121 -0.854 0.102 -5.728 -13.872 -5.321 7 C_G52:C62_C C 52 ? C 62 ? 19 1 1 A G 53 1_555 A C 61 1_555 -0.671 -0.468 0.449 -7.877 -17.915 -6.925 8 C_G53:C61_C C 53 ? C 61 ? 19 1 1 A U 54 1_555 A A 58 1_555 3.486 -1.340 0.534 -5.014 1.468 -94.822 9 C_U54:A58_C C 54 ? C 58 ? 24 4 1 A U 55 1_555 A G 17 1_555 0.331 -5.610 0.115 16.839 15.001 -96.862 10 C_U55:G17_C C 55 ? C 17 ? ? 2 1 A G 18 1_555 A C 56 1_555 0.488 0.373 -0.193 -35.994 -29.374 -1.290 11 C_G18:C56_C C 18 ? C 56 ? 19 1 1 A C 39 1_555 A C 33 1_555 -2.467 0.655 -1.261 23.766 -7.269 87.623 12 C_C38:C32_C C 38 ? C 32 ? ? ? 1 A G 40 1_555 A C 32 1_555 -0.090 -0.165 0.454 10.831 -12.232 3.890 13 C_G39:C31_C C 39 ? C 31 ? 19 1 1 A G 41 1_555 A C 31 1_555 -0.586 -0.398 -0.200 -4.310 -22.425 -0.760 14 C_G40:C30_C C 40 ? C 30 ? 19 1 1 A C 42 1_555 A G 30 1_555 -0.133 -0.382 -0.220 3.925 -20.694 1.995 15 C_C41:G29_C C 41 ? C 29 ? 19 1 1 A G 43 1_555 A C 29 1_555 -0.388 -0.223 0.009 -9.094 -13.804 -2.982 16 C_G42:C28_C C 42 ? C 28 ? 19 1 1 A G 44 1_555 A C 28 1_555 -0.176 -0.186 0.060 -15.987 -15.685 -0.576 17 C_G43:C27_C C 43 ? C 27 ? 19 1 1 A U 45 1_555 A A 27 1_555 -0.024 0.851 0.197 -19.735 -7.726 -33.285 18 C_U44:A26_C C 44 ? C 26 ? ? ? 1 A G 10 1_555 A C 26 1_555 -0.605 -0.386 0.399 -1.668 -11.930 2.604 19 C_G10:C25_C C 10 ? C 25 ? 19 1 1 A U 11 1_555 A A 25 1_555 -0.351 0.128 0.727 -19.741 -23.927 21.146 20 C_U11:A24_C C 11 ? C 24 ? ? 1 1 A C 12 1_555 A G 24 1_555 0.708 -0.036 0.209 -15.660 -1.333 -1.891 21 C_C12:G23_C C 12 ? C 23 ? 19 1 1 A U 13 1_555 A G 23 1_555 2.750 -0.757 0.037 5.942 -4.537 5.096 22 C_U13:G22_C C 13 ? C 22 ? 28 1 1 A A 14 1_555 A U 8 1_555 -3.760 -1.312 0.556 5.840 13.332 -105.391 23 C_A14:U8_C C 14 ? C 8 ? 24 4 1 A C 20 1_555 A C 48 1_555 0.441 -3.177 -0.219 -3.972 18.013 -121.558 24 C_C20:C47_C C 20 ? C 47 ? ? 6 1 B C 4 1_555 B G 69 1_555 -1.182 -0.277 1.002 19.056 -17.280 -6.537 25 D_C4:G69_D D 4 ? D 69 ? 19 1 1 B C 5 1_555 B G 68 1_555 -1.256 -0.349 -0.927 10.576 -26.824 -3.124 26 D_C5:G68_D D 5 ? D 68 ? 19 1 1 B C 6 1_555 B G 67 1_555 1.180 -0.196 0.455 -6.735 -25.684 -8.036 27 D_C6:G67_D D 6 ? D 67 ? ? 1 1 B U 7 1_555 B A 66 1_555 0.750 -0.119 1.187 -17.887 -24.127 -6.748 28 D_U7:A66_D D 7 ? D 66 ? 20 1 1 B G 50 1_555 B C 64 1_555 0.998 -0.111 -1.120 -6.875 -8.541 -11.349 29 D_G50:C64_D D 50 ? D 64 ? ? 1 1 B G 51 1_555 B C 63 1_555 -0.917 0.055 -0.038 -5.019 -16.688 16.329 30 D_G51:C63_D D 51 ? D 63 ? ? 1 1 B G 52 1_555 B C 62 1_555 -2.140 -0.848 0.095 -5.485 -13.433 -5.915 31 D_G52:C62_D D 52 ? D 62 ? 19 1 1 B G 53 1_555 B C 61 1_555 -0.726 -0.389 0.607 -6.583 -17.725 -5.671 32 D_G53:C61_D D 53 ? D 61 ? 19 1 1 B U 54 1_555 B A 58 1_555 3.541 -1.254 0.814 -9.375 5.516 -96.896 33 D_U54:A58_D D 54 ? D 58 ? 24 4 1 B U 55 1_555 B G 17 1_555 0.251 -5.630 0.459 12.977 21.893 -98.891 34 D_U55:G17_D D 55 ? D 17 ? ? 2 1 B G 18 1_555 B C 56 1_555 0.566 0.433 -0.065 -32.745 -28.636 1.361 35 D_G18:C56_D D 18 ? D 56 ? 19 1 1 B C 39 1_555 B C 33 1_555 -2.614 0.536 -1.490 28.931 -4.711 85.130 36 D_C38:C32_D D 38 ? D 32 ? ? ? 1 B G 40 1_555 B C 32 1_555 -0.080 -0.225 0.063 7.394 -11.064 2.801 37 D_G39:C31_D D 39 ? D 31 ? 19 1 1 B G 41 1_555 B C 31 1_555 -0.617 -0.377 -0.226 -3.841 -24.769 1.048 38 D_G40:C30_D D 40 ? D 30 ? 19 1 1 B C 42 1_555 B G 30 1_555 -0.037 -0.440 -0.416 4.244 -20.911 1.958 39 D_C41:G29_D D 41 ? D 29 ? 19 1 1 B G 43 1_555 B C 29 1_555 -0.441 -0.300 0.016 -5.282 -14.589 -3.154 40 D_G42:C28_D D 42 ? D 28 ? 19 1 1 B G 44 1_555 B C 28 1_555 -0.180 -0.159 0.136 -14.038 -19.629 -0.790 41 D_G43:C27_D D 43 ? D 27 ? 19 1 1 B U 45 1_555 B A 27 1_555 0.154 0.864 0.228 -17.956 -5.037 -30.790 42 D_U44:A26_D D 44 ? D 26 ? ? ? 1 B G 10 1_555 B C 26 1_555 -0.683 -0.303 0.714 1.230 -5.857 5.485 43 D_G10:C25_D D 10 ? D 25 ? 19 1 1 B U 11 1_555 B A 25 1_555 -0.243 0.087 0.850 -15.088 -20.662 22.401 44 D_U11:A24_D D 11 ? D 24 ? ? 1 1 B C 12 1_555 B G 24 1_555 0.540 -0.118 0.609 -20.384 2.691 -3.866 45 D_C12:G23_D D 12 ? D 23 ? 19 1 1 B U 13 1_555 B G 23 1_555 2.873 -0.737 -0.166 5.958 -10.370 6.249 46 D_U13:G22_D D 13 ? D 22 ? 28 ? 1 B A 14 1_555 B U 8 1_555 -3.662 -1.268 0.306 3.815 13.573 -104.814 47 D_A14:U8_D D 14 ? D 8 ? 24 4 1 B C 20 1_555 B C 48 1_555 0.535 -3.188 -0.706 0.206 21.078 -120.426 48 D_C20:C47_D D 20 ? D 47 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A U 7 1_555 A A 66 1_555 A A 49 1_555 A U 65 1_555 -0.014 -1.521 2.995 2.248 24.223 29.592 -4.671 0.239 1.396 39.993 -3.711 38.134 1 CC_U7A49:U65A66_CC C 7 ? C 66 ? C 49 ? C 65 ? 1 A A 49 1_555 A U 65 1_555 A G 50 1_555 A C 64 1_555 -0.809 -2.140 3.493 7.634 10.767 44.972 -3.573 1.641 2.773 13.729 -9.735 46.772 2 CC_A49G50:C64U65_CC C 49 ? C 65 ? C 50 ? C 64 ? 1 A G 50 1_555 A C 64 1_555 A G 51 1_555 A C 63 1_555 1.411 -1.061 3.158 -8.664 10.645 18.762 -5.579 -5.900 1.555 28.261 23.004 23.210 3 CC_G50G51:C63C64_CC C 50 ? C 64 ? C 51 ? C 63 ? 1 A G 51 1_555 A C 63 1_555 A G 52 1_555 A C 62 1_555 -0.322 -2.416 3.359 -1.292 0.469 23.551 -6.071 0.347 3.323 1.147 3.163 23.591 4 CC_G51G52:C62C63_CC C 51 ? C 63 ? C 52 ? C 62 ? 1 A G 52 1_555 A C 62 1_555 A G 53 1_555 A C 61 1_555 1.101 -1.368 3.329 1.951 -0.252 39.678 -1.983 -1.387 3.386 -0.371 -2.872 39.724 5 CC_G52G53:C61C62_CC C 52 ? C 62 ? C 53 ? C 61 ? 1 A G 53 1_555 A C 61 1_555 A U 54 1_555 A A 58 1_555 -1.710 -2.354 3.246 4.184 -0.674 82.907 -1.760 1.390 3.188 -0.509 -3.158 82.996 6 CC_G53U54:A58C61_CC C 53 ? C 61 ? C 54 ? C 58 ? 1 A U 54 1_555 A A 58 1_555 A U 55 1_555 A G 17 1_555 2.065 -2.287 3.524 12.320 -2.121 48.951 -2.508 -1.399 3.991 -2.512 -14.594 50.427 7 CC_U54U55:G17A58_CC C 54 ? C 58 ? C 55 ? C 17 ? 1 A C 39 1_555 A C 33 1_555 A G 40 1_555 A C 32 1_555 -1.626 -2.581 -1.822 105.907 -122.689 81.862 -1.706 0.468 -0.532 -63.663 -54.955 166.483 8 CC_C38G39:C31C32_CC C 38 ? C 32 ? C 39 ? C 31 ? 1 A G 40 1_555 A C 32 1_555 A G 41 1_555 A C 31 1_555 -0.976 -1.626 3.572 0.026 8.023 31.473 -4.364 1.751 3.074 14.498 -0.046 32.454 9 CC_G39G40:C30C31_CC C 39 ? C 31 ? C 40 ? C 30 ? 1 A G 41 1_555 A C 31 1_555 A C 42 1_555 A G 30 1_555 0.182 -1.363 3.109 1.509 0.563 32.124 -2.556 -0.073 3.090 1.016 -2.725 32.163 10 CC_G40C41:G29C30_CC C 40 ? C 30 ? C 41 ? C 29 ? 1 A C 42 1_555 A G 30 1_555 A G 43 1_555 A C 29 1_555 0.220 -1.707 3.684 -3.175 13.417 26.864 -6.039 -1.075 2.523 26.757 6.333 30.137 11 CC_C41G42:C28G29_CC C 41 ? C 29 ? C 42 ? C 28 ? 1 A G 43 1_555 A C 29 1_555 A G 44 1_555 A C 28 1_555 0.407 -1.336 3.399 0.985 4.202 38.355 -2.551 -0.492 3.249 6.371 -1.493 38.588 12 CC_G42G43:C27C28_CC C 42 ? C 28 ? C 43 ? C 27 ? 1 A G 44 1_555 A C 28 1_555 A U 45 1_555 A A 27 1_555 -2.007 -1.421 3.336 -0.265 7.353 36.873 -3.146 3.083 3.021 11.485 0.413 37.575 13 CC_G43U44:A26C27_CC C 43 ? C 27 ? C 44 ? C 26 ? 1 A U 45 1_555 A A 27 1_555 A G 10 1_555 A C 26 1_555 -1.671 -3.155 2.713 7.733 2.840 56.044 -3.450 2.098 2.334 3.004 -8.181 56.597 14 CC_U44G10:C25A26_CC C 44 ? C 26 ? C 10 ? C 25 ? 1 A G 10 1_555 A C 26 1_555 A U 11 1_555 A A 25 1_555 0.483 -1.215 3.582 -0.991 6.666 37.552 -2.756 -0.873 3.313 10.253 1.525 38.131 15 CC_G10U11:A24C25_CC C 10 ? C 25 ? C 11 ? C 24 ? 1 A U 11 1_555 A A 25 1_555 A C 12 1_555 A G 24 1_555 -1.384 -1.047 3.077 -1.375 8.497 36.040 -2.692 2.011 2.816 13.498 2.184 37.020 16 CC_U11C12:G23A24_CC C 11 ? C 24 ? C 12 ? C 23 ? 1 A C 12 1_555 A G 24 1_555 A U 13 1_555 A G 23 1_555 1.651 -2.169 2.851 2.928 -3.137 29.165 -3.640 -2.664 3.209 -6.188 -5.775 29.473 17 CC_C12U13:G22G23_CC C 12 ? C 23 ? C 13 ? C 22 ? 1 A U 13 1_555 A G 23 1_555 A A 14 1_555 A U 8 1_555 -1.102 -1.106 3.199 5.203 -0.694 73.243 -0.903 1.084 3.135 -0.581 -4.355 73.405 18 CC_U13A14:U8G22_CC C 13 ? C 22 ? C 14 ? C 8 ? 1 A A 14 1_555 A U 8 1_555 A C 20 1_555 A C 48 1_555 -2.600 1.859 4.007 3.807 -2.010 147.104 0.980 1.376 3.972 -1.048 -1.985 147.128 19 CC_A14C20:C47U8_CC C 14 ? C 8 ? C 20 ? C 47 ? 1 B C 4 1_555 B G 69 1_555 B C 5 1_555 B G 68 1_555 0.881 -1.871 3.152 19.318 4.891 32.785 -3.477 1.101 2.917 7.830 -30.926 38.224 20 DD_C4C5:G68G69_DD D 4 ? D 69 ? D 5 ? D 68 ? 1 B C 5 1_555 B G 68 1_555 B C 6 1_555 B G 67 1_555 -0.061 -1.563 4.026 -12.704 19.470 42.326 -3.684 -1.076 2.983 24.852 16.216 48.032 21 DD_C5C6:G67G68_DD D 5 ? D 68 ? D 6 ? D 67 ? 1 B C 6 1_555 B G 67 1_555 B U 7 1_555 B A 66 1_555 -0.453 -1.157 3.356 -5.954 14.796 33.827 -3.712 -0.057 2.678 23.853 9.598 37.298 22 DD_C6U7:A66G67_DD D 6 ? D 67 ? D 7 ? D 66 ? 1 B U 7 1_555 B A 66 1_555 B G 50 1_555 B C 64 1_555 -2.656 -3.164 5.884 1.705 11.140 69.718 -3.414 2.404 5.334 9.681 -1.482 70.509 23 DD_U7G50:C64A66_DD D 7 ? D 66 ? D 50 ? D 64 ? 1 B G 50 1_555 B C 64 1_555 B G 51 1_555 B C 63 1_555 1.385 -1.153 3.113 -7.034 11.038 20.395 -5.567 -5.098 1.711 27.781 17.704 24.196 24 DD_G50G51:C63C64_DD D 50 ? D 64 ? D 51 ? D 63 ? 1 B G 51 1_555 B C 63 1_555 B G 52 1_555 B C 62 1_555 -0.314 -2.562 3.333 -1.353 1.184 22.187 -7.081 0.305 3.207 3.069 3.509 22.259 25 DD_G51G52:C62C63_DD D 51 ? D 63 ? D 52 ? D 62 ? 1 B G 52 1_555 B C 62 1_555 B G 53 1_555 B C 61 1_555 1.105 -1.489 3.269 0.993 -0.224 39.775 -2.163 -1.508 3.303 -0.329 -1.459 39.787 26 DD_G52G53:C61C62_DD D 52 ? D 62 ? D 53 ? D 61 ? 1 B G 53 1_555 B C 61 1_555 B U 54 1_555 B A 58 1_555 -1.871 -2.369 3.484 3.793 -2.076 83.571 -1.723 1.499 3.460 -1.556 -2.845 83.662 27 DD_G53U54:A58C61_DD D 53 ? D 61 ? D 54 ? D 58 ? 1 B U 54 1_555 B A 58 1_555 B U 55 1_555 B G 17 1_555 1.893 -2.351 3.527 11.611 -0.363 48.468 -2.764 -1.274 3.872 -0.435 -13.912 49.759 28 DD_U54U55:G17A58_DD D 54 ? D 58 ? D 55 ? D 17 ? 1 B C 39 1_555 B C 33 1_555 B G 40 1_555 B C 32 1_555 -1.562 -2.664 -1.774 104.246 -118.845 93.147 -1.703 0.473 -0.638 -61.643 -54.070 164.985 29 DD_C38G39:C31C32_DD D 38 ? D 32 ? D 39 ? D 31 ? 1 B G 40 1_555 B C 32 1_555 B G 41 1_555 B C 31 1_555 -0.881 -1.487 3.548 -1.493 6.660 30.905 -4.015 1.327 3.203 12.309 2.759 31.631 30 DD_G39G40:C30C31_DD D 39 ? D 31 ? D 40 ? D 30 ? 1 B G 41 1_555 B C 31 1_555 B C 42 1_555 B G 30 1_555 0.216 -1.297 3.149 1.830 0.781 33.260 -2.387 -0.085 3.125 1.363 -3.193 33.318 31 DD_G40C41:G29C30_DD D 40 ? D 30 ? D 41 ? D 29 ? 1 B C 42 1_555 B G 30 1_555 B G 43 1_555 B C 29 1_555 0.215 -1.654 3.543 -3.388 14.271 25.941 -6.083 -1.099 2.295 29.024 6.890 29.739 32 DD_C41G42:C28G29_DD D 41 ? D 29 ? D 42 ? D 28 ? 1 B G 43 1_555 B C 29 1_555 B G 44 1_555 B C 28 1_555 0.451 -1.333 3.461 1.691 4.372 38.309 -2.579 -0.466 3.311 6.632 -2.565 38.584 33 DD_G42G43:C27C28_DD D 42 ? D 28 ? D 43 ? D 27 ? 1 B G 44 1_555 B C 28 1_555 B U 45 1_555 B A 27 1_555 -1.838 -1.384 3.371 1.024 7.605 37.343 -3.068 2.943 2.992 11.725 -1.579 38.096 34 DD_G43U44:A26C27_DD D 43 ? D 27 ? D 44 ? D 26 ? 1 B U 45 1_555 B A 27 1_555 B G 10 1_555 B C 26 1_555 -1.627 -3.015 2.651 5.620 2.183 55.056 -3.344 2.004 2.376 2.353 -6.059 55.359 35 DD_U44G10:C25A26_DD D 44 ? D 26 ? D 10 ? D 25 ? 1 B G 10 1_555 B C 26 1_555 B U 11 1_555 B A 25 1_555 0.471 -1.300 3.521 1.199 4.026 37.847 -2.533 -0.561 3.383 6.183 -1.842 38.071 36 DD_G10U11:A24C25_DD D 10 ? D 25 ? D 11 ? D 24 ? 1 B U 11 1_555 B A 25 1_555 B C 12 1_555 B G 24 1_555 -1.396 -1.217 3.258 -2.684 10.004 35.083 -3.272 1.870 2.909 16.166 4.336 36.534 37 DD_U11C12:G23A24_DD D 11 ? D 24 ? D 12 ? D 23 ? 1 B C 12 1_555 B G 24 1_555 B U 13 1_555 B G 23 1_555 1.676 -2.155 2.624 7.815 -4.381 31.202 -3.159 -1.751 3.205 -7.943 -14.167 32.432 38 DD_C12U13:G22G23_DD D 12 ? D 23 ? D 13 ? D 22 ? 1 B U 13 1_555 B G 23 1_555 B A 14 1_555 B U 8 1_555 -1.154 -1.059 3.419 3.417 1.610 72.657 -0.947 1.088 3.349 1.358 -2.882 72.742 39 DD_U13A14:U8G22_DD D 13 ? D 22 ? D 14 ? D 8 ? 1 B A 14 1_555 B U 8 1_555 B C 20 1_555 B C 48 1_555 -2.570 1.954 4.100 4.413 -3.627 147.075 1.039 1.364 4.052 -1.891 -2.301 147.118 40 DD_A14C20:C47U8_DD D 14 ? D 8 ? D 20 ? D 47 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'PHOSPHATE ION' PO4 4 'SULFATE ION' SO4 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2DET _pdbx_initial_refinement_model.details 'PDB ENTRY 2DET' #