data_2DRX # _entry.id 2DRX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2DRX pdb_00002drx 10.2210/pdb2drx/pdb RCSB RCSB025770 ? ? WWPDB D_1000025770 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2DRT 'similar sequence with one LOG triplet' unspecified PDB 1V4F 'similar sequence with no LOG triplet' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2DRX _pdbx_database_status.recvd_initial_deposition_date 2006-06-16 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Okuyama, K.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Unique side chain conformation of a leu residue in a triple-helical structure' _citation.journal_abbrev Biopolymers _citation.journal_volume 86 _citation.page_first 212 _citation.page_last 221 _citation.year 2007 _citation.journal_id_ASTM BIPMAA _citation.country US _citation.journal_id_ISSN 0006-3525 _citation.journal_id_CSD 0161 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17373653 _citation.pdbx_database_id_DOI 10.1002/bip.20724 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Okuyama, K.' 1 ? primary 'Narita, H.' 2 ? primary 'Kawaguchi, T.' 3 ? primary 'Noguchi, K.' 4 ? primary 'Tanaka, Y.' 5 ? primary 'Nishino, N.' 6 ? # _cell.entry_id 2DRX _cell.length_a 29.894 _cell.length_b 22.751 _cell.length_c 46.372 _cell.angle_alpha 90.00 _cell.angle_beta 107.62 _cell.angle_gamma 90.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2DRX _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'collagen like peptide' 2722.914 3 ? ? ? ? 2 water nat water 18.015 170 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'P(HYP)GP(HYP)GP(HYP)GP(HYP)GL(HYP)GL(HYP)GP(HYP)GP(HYP)GP(HYP)GP(HYP)G' _entity_poly.pdbx_seq_one_letter_code_can PPGPPGPPGPPGLPGLPGPPGPPGPPGPPG _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 HYP n 1 3 GLY n 1 4 PRO n 1 5 HYP n 1 6 GLY n 1 7 PRO n 1 8 HYP n 1 9 GLY n 1 10 PRO n 1 11 HYP n 1 12 GLY n 1 13 LEU n 1 14 HYP n 1 15 GLY n 1 16 LEU n 1 17 HYP n 1 18 GLY n 1 19 PRO n 1 20 HYP n 1 21 GLY n 1 22 PRO n 1 23 HYP n 1 24 GLY n 1 25 PRO n 1 26 HYP n 1 27 GLY n 1 28 PRO n 1 29 HYP n 1 30 GLY n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'Two LEU-Hyp-Gly guest triplets sandwiched by host Pro-Hyp-Gly sequence; This host triplet is very popular in the collagen sequence.' # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 2DRX _struct_ref.pdbx_db_accession 2DRX _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2DRX A 1 ? 30 ? 2DRX 1 ? 30 ? 1 30 2 1 2DRX B 1 ? 30 ? 2DRX 1 ? 30 ? 1 30 3 1 2DRX C 1 ? 30 ? 2DRX 1 ? 30 ? 1 30 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 HYP 'L-peptide linking' n 4-HYDROXYPROLINE HYDROXYPROLINE 'C5 H9 N O3' 131.130 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 # _exptl.entry_id 2DRX _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.83 _exptl_crystal.density_percent_sol 32.95 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details '13.5% PEG 2000, 0.05M citrate buffer, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2004-06-25 _diffrn_detector.details mirror # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si (111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.978 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-6A' _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline BL-6A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.978 # _reflns.entry_id 2DRX _reflns.observed_criterion_sigma_F 1.0 _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 1.4 _reflns.d_resolution_low 50.0 _reflns.number_all 11974 _reflns.number_obs 10986 _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.043 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 10.5 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.4 _reflns_shell.d_res_low 1.45 _reflns_shell.percent_possible_all 99.7 _reflns_shell.Rmerge_I_obs 0.294 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 3.3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1183 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2DRX _refine.ls_number_reflns_obs 10911 _refine.ls_number_reflns_all 10254 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.00 _refine.ls_d_res_high 1.40 _refine.ls_percent_reflns_obs 85.5 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.16 _refine.ls_R_factor_R_free 0.214 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 657 _refine.ls_number_parameters 4655 _refine.ls_number_restraints 5584 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method 'FREE R' _refine.details 'ANISOTROPIC REFINEMENT REDUCED FREE R (NO CUTOFF) BY ?' _refine.pdbx_starting_model 'PDB ENTRY 1V4F' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model 'anisotropic for peptide, isotropic for water' _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2DRX _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 0 _refine_analyze.occupancy_sum_hydrogen 482.50 _refine_analyze.occupancy_sum_non_hydrogen 720.50 _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 558 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 170 _refine_hist.number_atoms_total 728 _refine_hist.d_res_high 1.40 _refine_hist.d_res_low 8.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.023 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.0255 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.046 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.052 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.009 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.003 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.027 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.038 ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.40 1.46 . 0.196 0.103 . . . . . . 1057 . 'X-RAY DIFFRACTION' . 1.46 1.53 . 0.206 0.100 . . . . . . 1030 . 'X-RAY DIFFRACTION' . 1.53 1.60 . 0.184 0.097 . . . . . . 1001 . 'X-RAY DIFFRACTION' . 1.60 1.69 . 0.164 0.102 . . . . . . 1041 . 'X-RAY DIFFRACTION' . 1.69 1.81 . 0.158 0.098 . . . . . . 1007 . 'X-RAY DIFFRACTION' . 1.81 1.95 . 0.157 0.101 . . . . . . 1032 . 'X-RAY DIFFRACTION' # _pdbx_refine.entry_id 2DRX _pdbx_refine.R_factor_all_no_cutoff 0.1595 _pdbx_refine.R_factor_obs_no_cutoff ? _pdbx_refine.free_R_factor_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ? _pdbx_refine.free_R_val_test_set_ct_no_cutoff ? _pdbx_refine.R_factor_all_4sig_cutoff 0.1521 _pdbx_refine.R_factor_obs_4sig_cutoff ? _pdbx_refine.free_R_factor_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff ? _pdbx_refine.number_reflns_obs_4sig_cutoff 8862 _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _struct.entry_id 2DRX _struct.title 'Structure Analysis of (POG)4-(LOG)2-(POG)4' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2DRX _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN' _struct_keywords.text 'collagen, triple helix, Leu, STRUCTURAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 2 ? F N N 2 ? # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A PRO 1 C ? ? ? 1_555 A HYP 2 N ? ? A PRO 1 A HYP 2 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale2 covale both ? A HYP 2 C ? ? ? 1_555 A GLY 3 N ? ? A HYP 2 A GLY 3 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale3 covale both ? A PRO 4 C ? ? ? 1_555 A HYP 5 N ? ? A PRO 4 A HYP 5 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale4 covale both ? A HYP 5 C ? ? ? 1_555 A GLY 6 N ? ? A HYP 5 A GLY 6 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale5 covale both ? A PRO 7 C ? ? ? 1_555 A HYP 8 N ? ? A PRO 7 A HYP 8 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale6 covale both ? A HYP 8 C ? ? ? 1_555 A GLY 9 N ? ? A HYP 8 A GLY 9 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale7 covale both ? A PRO 10 C ? ? ? 1_555 A HYP 11 N ? ? A PRO 10 A HYP 11 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale8 covale both ? A HYP 11 C ? ? ? 1_555 A GLY 12 N ? ? A HYP 11 A GLY 12 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale9 covale both ? A LEU 13 C ? ? ? 1_555 A HYP 14 N ? ? A LEU 13 A HYP 14 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale10 covale both ? A HYP 14 C ? ? ? 1_555 A GLY 15 N ? ? A HYP 14 A GLY 15 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale11 covale both ? A LEU 16 C ? ? ? 1_555 A HYP 17 N ? ? A LEU 16 A HYP 17 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale12 covale both ? A HYP 17 C ? ? ? 1_555 A GLY 18 N ? ? A HYP 17 A GLY 18 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale13 covale both ? A PRO 19 C ? ? ? 1_555 A HYP 20 N ? ? A PRO 19 A HYP 20 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale14 covale both ? A HYP 20 C ? ? ? 1_555 A GLY 21 N ? ? A HYP 20 A GLY 21 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale15 covale both ? A PRO 22 C ? ? ? 1_555 A HYP 23 N ? ? A PRO 22 A HYP 23 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale16 covale both ? A HYP 23 C ? ? ? 1_555 A GLY 24 N ? ? A HYP 23 A GLY 24 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale17 covale both ? A PRO 25 C ? ? ? 1_555 A HYP 26 N ? ? A PRO 25 A HYP 26 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale18 covale both ? A HYP 26 C ? ? ? 1_555 A GLY 27 N ? ? A HYP 26 A GLY 27 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale19 covale both ? B HYP 2 C ? ? ? 1_555 B GLY 3 N ? ? B HYP 2 B GLY 3 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale20 covale both ? B PRO 4 C ? ? ? 1_555 B HYP 5 N ? ? B PRO 4 B HYP 5 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale21 covale both ? B HYP 5 C ? ? ? 1_555 B GLY 6 N ? ? B HYP 5 B GLY 6 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale22 covale both ? B PRO 7 C ? ? ? 1_555 B HYP 8 N ? ? B PRO 7 B HYP 8 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale23 covale both ? B HYP 8 C ? ? ? 1_555 B GLY 9 N ? ? B HYP 8 B GLY 9 1_555 ? ? ? ? ? ? ? 1.344 ? ? covale24 covale both ? B PRO 10 C ? ? ? 1_555 B HYP 11 N ? ? B PRO 10 B HYP 11 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale25 covale both ? B HYP 11 C ? ? ? 1_555 B GLY 12 N ? ? B HYP 11 B GLY 12 1_555 ? ? ? ? ? ? ? 1.353 ? ? covale26 covale both ? B LEU 13 C ? ? ? 1_555 B HYP 14 N ? ? B LEU 13 B HYP 14 1_555 ? ? ? ? ? ? ? 1.316 ? ? covale27 covale both ? B HYP 14 C ? ? ? 1_555 B GLY 15 N ? ? B HYP 14 B GLY 15 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale28 covale both ? B LEU 16 C ? ? ? 1_555 B HYP 17 N ? ? B LEU 16 B HYP 17 1_555 ? ? ? ? ? ? ? 1.316 ? ? covale29 covale both ? B HYP 17 C ? ? ? 1_555 B GLY 18 N ? ? B HYP 17 B GLY 18 1_555 ? ? ? ? ? ? ? 1.312 ? ? covale30 covale both ? B PRO 19 C ? ? ? 1_555 B HYP 20 N ? ? B PRO 19 B HYP 20 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale31 covale both ? B HYP 20 C ? ? ? 1_555 B GLY 21 N ? ? B HYP 20 B GLY 21 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale32 covale both ? B PRO 22 C ? ? ? 1_555 B HYP 23 N ? ? B PRO 22 B HYP 23 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale33 covale both ? B HYP 23 C ? ? ? 1_555 B GLY 24 N ? ? B HYP 23 B GLY 24 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale34 covale both ? B PRO 25 C ? ? ? 1_555 B HYP 26 N ? ? B PRO 25 B HYP 26 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale35 covale both ? B HYP 26 C ? ? ? 1_555 B GLY 27 N ? ? B HYP 26 B GLY 27 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale36 covale both ? B PRO 28 C ? ? ? 1_555 B HYP 29 N ? ? B PRO 28 B HYP 29 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale37 covale both ? B HYP 29 C ? ? ? 1_555 B GLY 30 N ? ? B HYP 29 B GLY 30 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale38 covale both ? C PRO 1 C ? ? ? 1_555 C HYP 2 N ? ? C PRO 1 C HYP 2 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale39 covale both ? C HYP 2 C ? ? ? 1_555 C GLY 3 N ? ? C HYP 2 C GLY 3 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale40 covale both ? C PRO 4 C ? ? ? 1_555 C HYP 5 N ? ? C PRO 4 C HYP 5 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale41 covale both ? C HYP 5 C ? ? ? 1_555 C GLY 6 N ? ? C HYP 5 C GLY 6 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale42 covale both ? C PRO 7 C ? ? ? 1_555 C HYP 8 N ? ? C PRO 7 C HYP 8 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale43 covale both ? C HYP 8 C ? ? ? 1_555 C GLY 9 N ? ? C HYP 8 C GLY 9 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale44 covale both ? C PRO 10 C ? ? ? 1_555 C HYP 11 N ? ? C PRO 10 C HYP 11 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale45 covale both ? C HYP 11 C ? ? ? 1_555 C GLY 12 N ? ? C HYP 11 C GLY 12 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale46 covale both ? C LEU 13 C ? ? ? 1_555 C HYP 14 N ? ? C LEU 13 C HYP 14 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale47 covale both ? C HYP 14 C ? ? ? 1_555 C GLY 15 N ? ? C HYP 14 C GLY 15 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale48 covale both ? C LEU 16 C ? ? ? 1_555 C HYP 17 N ? ? C LEU 16 C HYP 17 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale49 covale both ? C HYP 17 C ? ? ? 1_555 C GLY 18 N ? ? C HYP 17 C GLY 18 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale50 covale both ? C PRO 19 C ? ? ? 1_555 C HYP 20 N ? ? C PRO 19 C HYP 20 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale51 covale both ? C HYP 20 C ? ? ? 1_555 C GLY 21 N ? ? C HYP 20 C GLY 21 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale52 covale both ? C PRO 22 C ? ? ? 1_555 C HYP 23 N ? ? C PRO 22 C HYP 23 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale53 covale both ? C HYP 23 C ? ? ? 1_555 C GLY 24 N ? ? C HYP 23 C GLY 24 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale54 covale both ? C PRO 25 C ? ? ? 1_555 C HYP 26 N ? ? C PRO 25 C HYP 26 1_555 ? ? ? ? ? ? ? 1.313 ? ? covale55 covale both ? C HYP 26 C ? ? ? 1_555 C GLY 27 N ? ? C HYP 26 C GLY 27 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale56 covale both ? C PRO 28 C ? ? ? 1_555 C HYP 29 N ? ? C PRO 28 C HYP 29 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale57 covale both ? C HYP 29 C ? ? ? 1_555 C GLY 30 N ? ? C HYP 29 C GLY 30 1_555 ? ? ? ? ? ? ? 1.331 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 2DRX _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _atom_sites.entry_id 2DRX _atom_sites.fract_transf_matrix[1][1] 0.033452 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.010624 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.043954 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022626 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 1 1 PRO PRO A . n A 1 2 HYP 2 2 2 HYP HYP A . n A 1 3 GLY 3 3 3 GLY GLY A . n A 1 4 PRO 4 4 4 PRO PRO A . n A 1 5 HYP 5 5 5 HYP HYP A . n A 1 6 GLY 6 6 6 GLY GLY A . n A 1 7 PRO 7 7 7 PRO PRO A . n A 1 8 HYP 8 8 8 HYP HYP A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 HYP 11 11 11 HYP HYP A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 HYP 14 14 14 HYP HYP A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 HYP 17 17 17 HYP HYP A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 HYP 20 20 20 HYP HYP A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 PRO 22 22 22 PRO PRO A . n A 1 23 HYP 23 23 23 HYP HYP A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 PRO 25 25 25 PRO PRO A . n A 1 26 HYP 26 26 26 HYP HYP A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 PRO 28 28 28 PRO PRO A . n A 1 29 HYP 29 29 ? ? ? A . n A 1 30 GLY 30 30 ? ? ? A . n B 1 1 PRO 1 1 ? ? ? B . n B 1 2 HYP 2 2 2 HYP HYP B . n B 1 3 GLY 3 3 3 GLY GLY B . n B 1 4 PRO 4 4 4 PRO PRO B . n B 1 5 HYP 5 5 5 HYP HYP B . n B 1 6 GLY 6 6 6 GLY GLY B . n B 1 7 PRO 7 7 7 PRO PRO B . n B 1 8 HYP 8 8 8 HYP HYP B . n B 1 9 GLY 9 9 9 GLY GLY B . n B 1 10 PRO 10 10 10 PRO PRO B . n B 1 11 HYP 11 11 11 HYP HYP B . n B 1 12 GLY 12 12 12 GLY GLY B . n B 1 13 LEU 13 13 13 LEU LEU B . n B 1 14 HYP 14 14 14 HYP HYP B . n B 1 15 GLY 15 15 15 GLY GLY B . n B 1 16 LEU 16 16 16 LEU LEU B . n B 1 17 HYP 17 17 17 HYP HYP B . n B 1 18 GLY 18 18 18 GLY GLY B . n B 1 19 PRO 19 19 19 PRO PRO B . n B 1 20 HYP 20 20 20 HYP HYP B . n B 1 21 GLY 21 21 21 GLY GLY B . n B 1 22 PRO 22 22 22 PRO PRO B . n B 1 23 HYP 23 23 23 HYP HYP B . n B 1 24 GLY 24 24 24 GLY GLY B . n B 1 25 PRO 25 25 25 PRO PRO B . n B 1 26 HYP 26 26 26 HYP HYP B . n B 1 27 GLY 27 27 27 GLY GLY B . n B 1 28 PRO 28 28 28 PRO PRO B . n B 1 29 HYP 29 29 29 HYP HYP B . n B 1 30 GLY 30 30 30 GLY GLY B . n C 1 1 PRO 1 1 1 PRO PRO C . n C 1 2 HYP 2 2 2 HYP HYP C . n C 1 3 GLY 3 3 3 GLY GLY C . n C 1 4 PRO 4 4 4 PRO PRO C . n C 1 5 HYP 5 5 5 HYP HYP C . n C 1 6 GLY 6 6 6 GLY GLY C . n C 1 7 PRO 7 7 7 PRO PRO C . n C 1 8 HYP 8 8 8 HYP HYP C . n C 1 9 GLY 9 9 9 GLY GLY C . n C 1 10 PRO 10 10 10 PRO PRO C . n C 1 11 HYP 11 11 11 HYP HYP C . n C 1 12 GLY 12 12 12 GLY GLY C . n C 1 13 LEU 13 13 13 LEU LEU C . n C 1 14 HYP 14 14 14 HYP HYP C . n C 1 15 GLY 15 15 15 GLY GLY C . n C 1 16 LEU 16 16 16 LEU LEU C . n C 1 17 HYP 17 17 17 HYP HYP C . n C 1 18 GLY 18 18 18 GLY GLY C . n C 1 19 PRO 19 19 19 PRO PRO C . n C 1 20 HYP 20 20 20 HYP HYP C . n C 1 21 GLY 21 21 21 GLY GLY C . n C 1 22 PRO 22 22 22 PRO PRO C . n C 1 23 HYP 23 23 23 HYP HYP C . n C 1 24 GLY 24 24 24 GLY GLY C . n C 1 25 PRO 25 25 25 PRO PRO C . n C 1 26 HYP 26 26 26 HYP HYP C . n C 1 27 GLY 27 27 27 GLY GLY C . n C 1 28 PRO 28 28 28 PRO PRO C . n C 1 29 HYP 29 29 29 HYP HYP C . n C 1 30 GLY 30 30 30 GLY GLY C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 HOH 1 106 106 HOH HOH A . D 2 HOH 2 110 110 HOH HOH A . D 2 HOH 3 112 112 HOH HOH A . D 2 HOH 4 113 113 HOH HOH A . D 2 HOH 5 116 116 HOH HOH A . D 2 HOH 6 124 124 HOH HOH A . D 2 HOH 7 126 126 HOH HOH A . D 2 HOH 8 128 128 HOH HOH A . D 2 HOH 9 129 129 HOH HOH A . D 2 HOH 10 136 136 HOH HOH A . D 2 HOH 11 138 138 HOH HOH A . D 2 HOH 12 142 142 HOH HOH A . D 2 HOH 13 146 146 HOH HOH A . D 2 HOH 14 148 148 HOH HOH A . D 2 HOH 15 151 151 HOH HOH A . D 2 HOH 16 158 158 HOH HOH A . D 2 HOH 17 160 160 HOH HOH A . D 2 HOH 18 162 162 HOH HOH A . D 2 HOH 19 163 163 HOH HOH A . D 2 HOH 20 164 164 HOH HOH A . D 2 HOH 21 166 166 HOH HOH A . D 2 HOH 22 167 167 HOH HOH A . D 2 HOH 23 170 170 HOH HOH A . D 2 HOH 24 172 172 HOH HOH A . D 2 HOH 25 173 173 HOH HOH A . D 2 HOH 26 177 177 HOH HOH A . D 2 HOH 27 181 181 HOH HOH A . D 2 HOH 28 183 183 HOH HOH A . D 2 HOH 29 186 186 HOH HOH A . D 2 HOH 30 192 192 HOH HOH A . D 2 HOH 31 194 194 HOH HOH A . D 2 HOH 32 199 199 HOH HOH A . D 2 HOH 33 206 206 HOH HOH A . D 2 HOH 34 1110 1110 HOH HOH A . D 2 HOH 35 1113 1113 HOH HOH A . D 2 HOH 36 1114 1114 HOH HOH A . D 2 HOH 37 1116 1116 HOH HOH A . D 2 HOH 38 1124 1124 HOH HOH A . D 2 HOH 39 1126 1126 HOH HOH A . D 2 HOH 40 1127 1127 HOH HOH A . D 2 HOH 41 1130 1130 HOH HOH A . D 2 HOH 42 1136 1136 HOH HOH A . D 2 HOH 43 1138 1138 HOH HOH A . D 2 HOH 44 1140 1140 HOH HOH A . D 2 HOH 45 1142 1142 HOH HOH A . D 2 HOH 46 1145 1145 HOH HOH A . D 2 HOH 47 1146 1146 HOH HOH A . D 2 HOH 48 1157 1157 HOH HOH A . D 2 HOH 49 1158 1158 HOH HOH A . D 2 HOH 50 1162 1162 HOH HOH A . E 2 HOH 1 102 102 HOH HOH B . E 2 HOH 2 105 105 HOH HOH B . E 2 HOH 3 108 108 HOH HOH B . E 2 HOH 4 109 109 HOH HOH B . E 2 HOH 5 111 111 HOH HOH B . E 2 HOH 6 114 114 HOH HOH B . E 2 HOH 7 115 115 HOH HOH B . E 2 HOH 8 117 117 HOH HOH B . E 2 HOH 9 119 119 HOH HOH B . E 2 HOH 10 120 120 HOH HOH B . E 2 HOH 11 122 122 HOH HOH B . E 2 HOH 12 125 125 HOH HOH B . E 2 HOH 13 127 127 HOH HOH B . E 2 HOH 14 131 131 HOH HOH B . E 2 HOH 15 135 135 HOH HOH B . E 2 HOH 16 137 137 HOH HOH B . E 2 HOH 17 141 141 HOH HOH B . E 2 HOH 18 144 144 HOH HOH B . E 2 HOH 19 145 145 HOH HOH B . E 2 HOH 20 147 147 HOH HOH B . E 2 HOH 21 149 149 HOH HOH B . E 2 HOH 22 150 150 HOH HOH B . E 2 HOH 23 161 161 HOH HOH B . E 2 HOH 24 168 168 HOH HOH B . E 2 HOH 25 171 171 HOH HOH B . E 2 HOH 26 174 174 HOH HOH B . E 2 HOH 27 176 176 HOH HOH B . E 2 HOH 28 178 178 HOH HOH B . E 2 HOH 29 179 179 HOH HOH B . E 2 HOH 30 180 180 HOH HOH B . E 2 HOH 31 182 182 HOH HOH B . E 2 HOH 32 184 184 HOH HOH B . E 2 HOH 33 185 185 HOH HOH B . E 2 HOH 34 188 188 HOH HOH B . E 2 HOH 35 190 190 HOH HOH B . E 2 HOH 36 195 195 HOH HOH B . E 2 HOH 37 198 198 HOH HOH B . E 2 HOH 38 200 200 HOH HOH B . E 2 HOH 39 202 202 HOH HOH B . E 2 HOH 40 204 204 HOH HOH B . E 2 HOH 41 205 205 HOH HOH B . E 2 HOH 42 1102 1102 HOH HOH B . E 2 HOH 43 1103 1103 HOH HOH B . E 2 HOH 44 1105 1105 HOH HOH B . E 2 HOH 45 1106 1106 HOH HOH B . E 2 HOH 46 1108 1108 HOH HOH B . E 2 HOH 47 1109 1109 HOH HOH B . E 2 HOH 48 1111 1111 HOH HOH B . E 2 HOH 49 1112 1112 HOH HOH B . E 2 HOH 50 1115 1115 HOH HOH B . E 2 HOH 51 1117 1117 HOH HOH B . E 2 HOH 52 1118 1118 HOH HOH B . E 2 HOH 53 1119 1119 HOH HOH B . E 2 HOH 54 1120 1120 HOH HOH B . E 2 HOH 55 1121 1121 HOH HOH B . E 2 HOH 56 1122 1122 HOH HOH B . E 2 HOH 57 1123 1123 HOH HOH B . E 2 HOH 58 1125 1125 HOH HOH B . E 2 HOH 59 1128 1128 HOH HOH B . E 2 HOH 60 1131 1131 HOH HOH B . E 2 HOH 61 1132 1132 HOH HOH B . E 2 HOH 62 1133 1133 HOH HOH B . E 2 HOH 63 1134 1134 HOH HOH B . E 2 HOH 64 1135 1135 HOH HOH B . E 2 HOH 65 1143 1143 HOH HOH B . E 2 HOH 66 1144 1144 HOH HOH B . E 2 HOH 67 1147 1147 HOH HOH B . E 2 HOH 68 1149 1149 HOH HOH B . E 2 HOH 69 1150 1150 HOH HOH B . E 2 HOH 70 1152 1152 HOH HOH B . E 2 HOH 71 1153 1153 HOH HOH B . E 2 HOH 72 1154 1154 HOH HOH B . E 2 HOH 73 1155 1155 HOH HOH B . E 2 HOH 74 1159 1159 HOH HOH B . E 2 HOH 75 2101 2101 HOH HOH B . E 2 HOH 76 2102 2102 HOH HOH B . F 2 HOH 1 101 101 HOH HOH C . F 2 HOH 2 103 103 HOH HOH C . F 2 HOH 3 104 104 HOH HOH C . F 2 HOH 4 107 107 HOH HOH C . F 2 HOH 5 118 118 HOH HOH C . F 2 HOH 6 121 121 HOH HOH C . F 2 HOH 7 123 123 HOH HOH C . F 2 HOH 8 130 130 HOH HOH C . F 2 HOH 9 132 132 HOH HOH C . F 2 HOH 10 133 133 HOH HOH C . F 2 HOH 11 134 134 HOH HOH C . F 2 HOH 12 139 139 HOH HOH C . F 2 HOH 13 140 140 HOH HOH C . F 2 HOH 14 143 143 HOH HOH C . F 2 HOH 15 152 152 HOH HOH C . F 2 HOH 16 153 153 HOH HOH C . F 2 HOH 17 154 154 HOH HOH C . F 2 HOH 18 155 155 HOH HOH C . F 2 HOH 19 156 156 HOH HOH C . F 2 HOH 20 157 157 HOH HOH C . F 2 HOH 21 159 159 HOH HOH C . F 2 HOH 22 165 165 HOH HOH C . F 2 HOH 23 169 169 HOH HOH C . F 2 HOH 24 175 175 HOH HOH C . F 2 HOH 25 187 187 HOH HOH C . F 2 HOH 26 189 189 HOH HOH C . F 2 HOH 27 191 191 HOH HOH C . F 2 HOH 28 193 193 HOH HOH C . F 2 HOH 29 196 196 HOH HOH C . F 2 HOH 30 197 197 HOH HOH C . F 2 HOH 31 201 201 HOH HOH C . F 2 HOH 32 203 203 HOH HOH C . F 2 HOH 33 1101 1101 HOH HOH C . F 2 HOH 34 1104 1104 HOH HOH C . F 2 HOH 35 1107 1107 HOH HOH C . F 2 HOH 36 1129 1129 HOH HOH C . F 2 HOH 37 1137 1137 HOH HOH C . F 2 HOH 38 1139 1139 HOH HOH C . F 2 HOH 39 1141 1141 HOH HOH C . F 2 HOH 40 1148 1148 HOH HOH C . F 2 HOH 41 1151 1151 HOH HOH C . F 2 HOH 42 1156 1156 HOH HOH C . F 2 HOH 43 1160 1160 HOH HOH C . F 2 HOH 44 1161 1161 HOH HOH C . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A HYP 2 A HYP 2 ? PRO 4-HYDROXYPROLINE 2 A HYP 5 A HYP 5 ? PRO 4-HYDROXYPROLINE 3 A HYP 8 A HYP 8 ? PRO 4-HYDROXYPROLINE 4 A HYP 11 A HYP 11 ? PRO 4-HYDROXYPROLINE 5 A HYP 14 A HYP 14 ? PRO 4-HYDROXYPROLINE 6 A HYP 17 A HYP 17 ? PRO 4-HYDROXYPROLINE 7 A HYP 20 A HYP 20 ? PRO 4-HYDROXYPROLINE 8 A HYP 23 A HYP 23 ? PRO 4-HYDROXYPROLINE 9 A HYP 26 A HYP 26 ? PRO 4-HYDROXYPROLINE 10 B HYP 2 B HYP 2 ? PRO 4-HYDROXYPROLINE 11 B HYP 5 B HYP 5 ? PRO 4-HYDROXYPROLINE 12 B HYP 8 B HYP 8 ? PRO 4-HYDROXYPROLINE 13 B HYP 11 B HYP 11 ? PRO 4-HYDROXYPROLINE 14 B HYP 14 B HYP 14 ? PRO 4-HYDROXYPROLINE 15 B HYP 17 B HYP 17 ? PRO 4-HYDROXYPROLINE 16 B HYP 20 B HYP 20 ? PRO 4-HYDROXYPROLINE 17 B HYP 23 B HYP 23 ? PRO 4-HYDROXYPROLINE 18 B HYP 26 B HYP 26 ? PRO 4-HYDROXYPROLINE 19 B HYP 29 B HYP 29 ? PRO 4-HYDROXYPROLINE 20 C HYP 2 C HYP 2 ? PRO 4-HYDROXYPROLINE 21 C HYP 5 C HYP 5 ? PRO 4-HYDROXYPROLINE 22 C HYP 8 C HYP 8 ? PRO 4-HYDROXYPROLINE 23 C HYP 11 C HYP 11 ? PRO 4-HYDROXYPROLINE 24 C HYP 14 C HYP 14 ? PRO 4-HYDROXYPROLINE 25 C HYP 17 C HYP 17 ? PRO 4-HYDROXYPROLINE 26 C HYP 20 C HYP 20 ? PRO 4-HYDROXYPROLINE 27 C HYP 23 C HYP 23 ? PRO 4-HYDROXYPROLINE 28 C HYP 26 C HYP 26 ? PRO 4-HYDROXYPROLINE 29 C HYP 29 C HYP 29 ? PRO 4-HYDROXYPROLINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5040 ? 1 MORE -25 ? 1 'SSA (A^2)' 5040 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-04-24 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SHELX 'model building' . ? 1 SHELXL-97 refinement . ? 2 ADSC 'data collection' . ? 3 HKL-2000 'data scaling' . ? 4 X-PLOR phasing . ? 5 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A HYP 29 ? A HYP 29 2 1 Y 1 A GLY 30 ? A GLY 30 3 1 Y 1 B PRO 1 ? B PRO 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal GLY N N N N 1 GLY CA C N N 2 GLY C C N N 3 GLY O O N N 4 GLY OXT O N N 5 GLY H H N N 6 GLY H2 H N N 7 GLY HA2 H N N 8 GLY HA3 H N N 9 GLY HXT H N N 10 HOH O O N N 11 HOH H1 H N N 12 HOH H2 H N N 13 HYP N N N N 14 HYP CA C N S 15 HYP C C N N 16 HYP O O N N 17 HYP CB C N N 18 HYP CG C N R 19 HYP CD C N N 20 HYP OD1 O N N 21 HYP OXT O N N 22 HYP H H N N 23 HYP HA H N N 24 HYP HB2 H N N 25 HYP HB3 H N N 26 HYP HG H N N 27 HYP HD22 H N N 28 HYP HD23 H N N 29 HYP HD1 H N N 30 HYP HXT H N N 31 LEU N N N N 32 LEU CA C N S 33 LEU C C N N 34 LEU O O N N 35 LEU CB C N N 36 LEU CG C N N 37 LEU CD1 C N N 38 LEU CD2 C N N 39 LEU OXT O N N 40 LEU H H N N 41 LEU H2 H N N 42 LEU HA H N N 43 LEU HB2 H N N 44 LEU HB3 H N N 45 LEU HG H N N 46 LEU HD11 H N N 47 LEU HD12 H N N 48 LEU HD13 H N N 49 LEU HD21 H N N 50 LEU HD22 H N N 51 LEU HD23 H N N 52 LEU HXT H N N 53 PRO N N N N 54 PRO CA C N S 55 PRO C C N N 56 PRO O O N N 57 PRO CB C N N 58 PRO CG C N N 59 PRO CD C N N 60 PRO OXT O N N 61 PRO H H N N 62 PRO HA H N N 63 PRO HB2 H N N 64 PRO HB3 H N N 65 PRO HG2 H N N 66 PRO HG3 H N N 67 PRO HD2 H N N 68 PRO HD3 H N N 69 PRO HXT H N N 70 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GLY N CA sing N N 1 GLY N H sing N N 2 GLY N H2 sing N N 3 GLY CA C sing N N 4 GLY CA HA2 sing N N 5 GLY CA HA3 sing N N 6 GLY C O doub N N 7 GLY C OXT sing N N 8 GLY OXT HXT sing N N 9 HOH O H1 sing N N 10 HOH O H2 sing N N 11 HYP N CA sing N N 12 HYP N CD sing N N 13 HYP N H sing N N 14 HYP CA C sing N N 15 HYP CA CB sing N N 16 HYP CA HA sing N N 17 HYP C O doub N N 18 HYP C OXT sing N N 19 HYP CB CG sing N N 20 HYP CB HB2 sing N N 21 HYP CB HB3 sing N N 22 HYP CG CD sing N N 23 HYP CG OD1 sing N N 24 HYP CG HG sing N N 25 HYP CD HD22 sing N N 26 HYP CD HD23 sing N N 27 HYP OD1 HD1 sing N N 28 HYP OXT HXT sing N N 29 LEU N CA sing N N 30 LEU N H sing N N 31 LEU N H2 sing N N 32 LEU CA C sing N N 33 LEU CA CB sing N N 34 LEU CA HA sing N N 35 LEU C O doub N N 36 LEU C OXT sing N N 37 LEU CB CG sing N N 38 LEU CB HB2 sing N N 39 LEU CB HB3 sing N N 40 LEU CG CD1 sing N N 41 LEU CG CD2 sing N N 42 LEU CG HG sing N N 43 LEU CD1 HD11 sing N N 44 LEU CD1 HD12 sing N N 45 LEU CD1 HD13 sing N N 46 LEU CD2 HD21 sing N N 47 LEU CD2 HD22 sing N N 48 LEU CD2 HD23 sing N N 49 LEU OXT HXT sing N N 50 PRO N CA sing N N 51 PRO N CD sing N N 52 PRO N H sing N N 53 PRO CA C sing N N 54 PRO CA CB sing N N 55 PRO CA HA sing N N 56 PRO C O doub N N 57 PRO C OXT sing N N 58 PRO CB CG sing N N 59 PRO CB HB2 sing N N 60 PRO CB HB3 sing N N 61 PRO CG CD sing N N 62 PRO CG HG2 sing N N 63 PRO CG HG3 sing N N 64 PRO CD HD2 sing N N 65 PRO CD HD3 sing N N 66 PRO OXT HXT sing N N 67 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1V4F _pdbx_initial_refinement_model.details 'PDB ENTRY 1V4F' #