data_2DVV # _entry.id 2DVV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2DVV pdb_00002dvv 10.2210/pdb2dvv/pdb RCSB RCSB025906 ? ? WWPDB D_1000025906 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hso003006073.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2DVV _pdbx_database_status.recvd_initial_deposition_date 2006-08-01 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Padmanabhan, B.' 1 'Yokoyama, S.' 2 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 3 # _citation.id primary _citation.title 'Crystal structure of the second bromodomain of the human Brd2 protein' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Padmanabhan, B.' 1 ? primary 'Yokoyama, S.' 2 ? # _cell.entry_id 2DVV _cell.length_a 71.782 _cell.length_b 52.604 _cell.length_c 32.059 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2DVV _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Bromodomain-containing protein 2' 13184.141 1 ? ? 'Residues 348-455' ? 2 non-polymer syn '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 238.305 1 ? ? ? ? 3 water nat water 18.015 270 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'BRD2, RING3 protein, O27.1.1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFS NCYKYNPPDHDVVAMARKLQDVFEFRYAKMPD ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFS NCYKYNPPDHDVVAMARKLQDVFEFRYAKMPD ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hso003006073.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 GLU n 1 6 GLN n 1 7 LEU n 1 8 LYS n 1 9 HIS n 1 10 CYS n 1 11 ASN n 1 12 GLY n 1 13 ILE n 1 14 LEU n 1 15 LYS n 1 16 GLU n 1 17 LEU n 1 18 LEU n 1 19 SER n 1 20 LYS n 1 21 LYS n 1 22 HIS n 1 23 ALA n 1 24 ALA n 1 25 TYR n 1 26 ALA n 1 27 TRP n 1 28 PRO n 1 29 PHE n 1 30 TYR n 1 31 LYS n 1 32 PRO n 1 33 VAL n 1 34 ASP n 1 35 ALA n 1 36 SER n 1 37 ALA n 1 38 LEU n 1 39 GLY n 1 40 LEU n 1 41 HIS n 1 42 ASP n 1 43 TYR n 1 44 HIS n 1 45 ASP n 1 46 ILE n 1 47 ILE n 1 48 LYS n 1 49 HIS n 1 50 PRO n 1 51 MET n 1 52 ASP n 1 53 LEU n 1 54 SER n 1 55 THR n 1 56 VAL n 1 57 LYS n 1 58 ARG n 1 59 LYS n 1 60 MET n 1 61 GLU n 1 62 ASN n 1 63 ARG n 1 64 ASP n 1 65 TYR n 1 66 ARG n 1 67 ASP n 1 68 ALA n 1 69 GLN n 1 70 GLU n 1 71 PHE n 1 72 ALA n 1 73 ALA n 1 74 ASP n 1 75 VAL n 1 76 ARG n 1 77 LEU n 1 78 MET n 1 79 PHE n 1 80 SER n 1 81 ASN n 1 82 CYS n 1 83 TYR n 1 84 LYS n 1 85 TYR n 1 86 ASN n 1 87 PRO n 1 88 PRO n 1 89 ASP n 1 90 HIS n 1 91 ASP n 1 92 VAL n 1 93 VAL n 1 94 ALA n 1 95 MET n 1 96 ALA n 1 97 ARG n 1 98 LYS n 1 99 LEU n 1 100 GLN n 1 101 ASP n 1 102 VAL n 1 103 PHE n 1 104 GLU n 1 105 PHE n 1 106 ARG n 1 107 TYR n 1 108 ALA n 1 109 LYS n 1 110 MET n 1 111 PRO n 1 112 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'BRD2, KIAA9001, RING3' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET15B _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BRD2_HUMAN _struct_ref.pdbx_db_accession P25440 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYK YNPPDHDVVAMARKLQDVFEFRYAKMPD ; _struct_ref.pdbx_align_begin 348 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2DVV _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 112 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P25440 _struct_ref_seq.db_align_beg 348 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 455 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 348 _struct_ref_seq.pdbx_auth_seq_align_end 455 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2DVV GLY A 1 ? UNP P25440 ? ? 'cloning artifact' 1 1 1 2DVV SER A 2 ? UNP P25440 ? ? 'cloning artifact' 2 2 1 2DVV HIS A 3 ? UNP P25440 ? ? 'cloning artifact' 3 3 1 2DVV MET A 4 ? UNP P25440 ? ? 'cloning artifact' 4 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EPE non-polymer . '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' HEPES 'C8 H18 N2 O4 S' 238.305 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2DVV _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.30 _exptl_crystal.density_percent_sol 48.00 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'PEG4000, AMMONIUM ACETATE, PH 6.5, VAPOR DIFFUSION, TEMPERATURE 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 120.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU JUPITER 210' _diffrn_detector.pdbx_collection_date 2004-12-12 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL26B1' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL26B1 _diffrn_source.pdbx_wavelength 1.0 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 2DVV _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 1.800 _reflns.number_obs 11743 _reflns.number_all ? _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs 0.063 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.800 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.86 _reflns_shell.percent_possible_all 95.2 _reflns_shell.Rmerge_I_obs 0.238 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 6.00 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2DVV _refine.ls_number_reflns_obs 11116 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.188 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.188 _refine.ls_R_factor_R_free 0.239 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 585 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 19.80 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'BRD2-BD1(PDB entry:1X0J)' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ISOTROPIC _refine.pdbx_stereochemistry_target_values 'ENGH & HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2DVV _refine_analyze.Luzzati_coordinate_error_obs 0.18 _refine_analyze.Luzzati_sigma_a_obs 0.05 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.24 _refine_analyze.Luzzati_sigma_a_free 0.10 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 913 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 15 _refine_hist.number_atoms_solvent 270 _refine_hist.number_atoms_total 1198 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.85 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 1.80 _refine_ls_shell.d_res_low 1.91 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.195 _refine_ls_shell.percent_reflns_obs 95.80 _refine_ls_shell.R_factor_R_free 0.24 _refine_ls_shell.R_factor_R_free_error 0.025 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 94 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2DVV _struct.title 'Crystal structure of the second bromodomain of the human Brd2 protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2DVV _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text ;bromodomain, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, TRANSCRIPTION ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 HIS A 3 ? LEU A 18 ? HIS A 3 LEU A 361 1 ? 16 HELX_P HELX_P2 2 SER A 19 ? LYS A 21 ? SER A 362 LYS A 364 5 ? 3 HELX_P HELX_P3 3 HIS A 22 ? TRP A 27 ? HIS A 365 TRP A 370 1 ? 6 HELX_P HELX_P4 4 PRO A 28 ? TYR A 30 ? PRO A 371 TYR A 373 5 ? 3 HELX_P HELX_P5 5 ASP A 34 ? GLY A 39 ? ASP A 377 GLY A 382 1 ? 6 HELX_P HELX_P6 6 ASP A 42 ? ILE A 47 ? ASP A 385 ILE A 390 1 ? 6 HELX_P HELX_P7 7 ASP A 52 ? ASN A 62 ? ASP A 395 ASN A 405 1 ? 11 HELX_P HELX_P8 8 ASP A 67 ? ASN A 86 ? ASP A 410 ASN A 429 1 ? 20 HELX_P HELX_P9 9 HIS A 90 ? ALA A 108 ? HIS A 433 ALA A 451 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id EPE _struct_site.pdbx_auth_seq_id 300 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 9 _struct_site.details 'BINDING SITE FOR RESIDUE EPE A 300' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 TRP A 27 ? TRP A 370 . ? 1_555 ? 2 AC1 9 PRO A 28 ? PRO A 371 . ? 1_555 ? 3 AC1 9 TYR A 43 ? TYR A 386 . ? 1_555 ? 4 AC1 9 ASN A 81 ? ASN A 424 . ? 1_555 ? 5 AC1 9 CYS A 82 ? CYS A 425 . ? 1_555 ? 6 AC1 9 ASN A 86 ? ASN A 429 . ? 1_555 ? 7 AC1 9 HOH C . ? HOH A 498 . ? 1_555 ? 8 AC1 9 HOH C . ? HOH A 590 . ? 1_555 ? 9 AC1 9 HOH C . ? HOH A 641 . ? 1_555 ? # _database_PDB_matrix.entry_id 2DVV _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2DVV _atom_sites.fract_transf_matrix[1][1] 0.013931 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019010 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.031192 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 HIS 3 3 3 HIS HIS A . n A 1 4 MET 4 4 4 MET MET A . n A 1 5 GLU 5 348 348 GLU GLU A . n A 1 6 GLN 6 349 349 GLN GLN A . n A 1 7 LEU 7 350 350 LEU LEU A . n A 1 8 LYS 8 351 351 LYS LYS A . n A 1 9 HIS 9 352 352 HIS HIS A . n A 1 10 CYS 10 353 353 CYS CYS A . n A 1 11 ASN 11 354 354 ASN ASN A . n A 1 12 GLY 12 355 355 GLY GLY A . n A 1 13 ILE 13 356 356 ILE ILE A . n A 1 14 LEU 14 357 357 LEU LEU A . n A 1 15 LYS 15 358 358 LYS LYS A . n A 1 16 GLU 16 359 359 GLU GLU A . n A 1 17 LEU 17 360 360 LEU LEU A . n A 1 18 LEU 18 361 361 LEU LEU A . n A 1 19 SER 19 362 362 SER SER A . n A 1 20 LYS 20 363 363 LYS LYS A . n A 1 21 LYS 21 364 364 LYS LYS A . n A 1 22 HIS 22 365 365 HIS HIS A . n A 1 23 ALA 23 366 366 ALA ALA A . n A 1 24 ALA 24 367 367 ALA ALA A . n A 1 25 TYR 25 368 368 TYR TYR A . n A 1 26 ALA 26 369 369 ALA ALA A . n A 1 27 TRP 27 370 370 TRP TRP A . n A 1 28 PRO 28 371 371 PRO PRO A . n A 1 29 PHE 29 372 372 PHE PHE A . n A 1 30 TYR 30 373 373 TYR TYR A . n A 1 31 LYS 31 374 374 LYS LYS A . n A 1 32 PRO 32 375 375 PRO PRO A . n A 1 33 VAL 33 376 376 VAL VAL A . n A 1 34 ASP 34 377 377 ASP ASP A . n A 1 35 ALA 35 378 378 ALA ALA A . n A 1 36 SER 36 379 379 SER SER A . n A 1 37 ALA 37 380 380 ALA ALA A . n A 1 38 LEU 38 381 381 LEU LEU A . n A 1 39 GLY 39 382 382 GLY GLY A . n A 1 40 LEU 40 383 383 LEU LEU A . n A 1 41 HIS 41 384 384 HIS HIS A . n A 1 42 ASP 42 385 385 ASP ASP A . n A 1 43 TYR 43 386 386 TYR TYR A . n A 1 44 HIS 44 387 387 HIS HIS A . n A 1 45 ASP 45 388 388 ASP ASP A . n A 1 46 ILE 46 389 389 ILE ILE A . n A 1 47 ILE 47 390 390 ILE ILE A . n A 1 48 LYS 48 391 391 LYS LYS A . n A 1 49 HIS 49 392 392 HIS HIS A . n A 1 50 PRO 50 393 393 PRO PRO A . n A 1 51 MET 51 394 394 MET MET A . n A 1 52 ASP 52 395 395 ASP ASP A . n A 1 53 LEU 53 396 396 LEU LEU A . n A 1 54 SER 54 397 397 SER SER A . n A 1 55 THR 55 398 398 THR THR A . n A 1 56 VAL 56 399 399 VAL VAL A . n A 1 57 LYS 57 400 400 LYS LYS A . n A 1 58 ARG 58 401 401 ARG ARG A . n A 1 59 LYS 59 402 402 LYS LYS A . n A 1 60 MET 60 403 403 MET MET A . n A 1 61 GLU 61 404 404 GLU GLU A . n A 1 62 ASN 62 405 405 ASN ASN A . n A 1 63 ARG 63 406 406 ARG ARG A . n A 1 64 ASP 64 407 407 ASP ASP A . n A 1 65 TYR 65 408 408 TYR TYR A . n A 1 66 ARG 66 409 409 ARG ARG A . n A 1 67 ASP 67 410 410 ASP ASP A . n A 1 68 ALA 68 411 411 ALA ALA A . n A 1 69 GLN 69 412 412 GLN GLN A . n A 1 70 GLU 70 413 413 GLU GLU A . n A 1 71 PHE 71 414 414 PHE PHE A . n A 1 72 ALA 72 415 415 ALA ALA A . n A 1 73 ALA 73 416 416 ALA ALA A . n A 1 74 ASP 74 417 417 ASP ASP A . n A 1 75 VAL 75 418 418 VAL VAL A . n A 1 76 ARG 76 419 419 ARG ARG A . n A 1 77 LEU 77 420 420 LEU LEU A . n A 1 78 MET 78 421 421 MET MET A . n A 1 79 PHE 79 422 422 PHE PHE A . n A 1 80 SER 80 423 423 SER SER A . n A 1 81 ASN 81 424 424 ASN ASN A . n A 1 82 CYS 82 425 425 CYS CYS A . n A 1 83 TYR 83 426 426 TYR TYR A . n A 1 84 LYS 84 427 427 LYS LYS A . n A 1 85 TYR 85 428 428 TYR TYR A . n A 1 86 ASN 86 429 429 ASN ASN A . n A 1 87 PRO 87 430 430 PRO PRO A . n A 1 88 PRO 88 431 431 PRO PRO A . n A 1 89 ASP 89 432 432 ASP ASP A . n A 1 90 HIS 90 433 433 HIS HIS A . n A 1 91 ASP 91 434 434 ASP ASP A . n A 1 92 VAL 92 435 435 VAL VAL A . n A 1 93 VAL 93 436 436 VAL VAL A . n A 1 94 ALA 94 437 437 ALA ALA A . n A 1 95 MET 95 438 438 MET MET A . n A 1 96 ALA 96 439 439 ALA ALA A . n A 1 97 ARG 97 440 440 ARG ARG A . n A 1 98 LYS 98 441 441 LYS LYS A . n A 1 99 LEU 99 442 442 LEU LEU A . n A 1 100 GLN 100 443 443 GLN GLN A . n A 1 101 ASP 101 444 444 ASP ASP A . n A 1 102 VAL 102 445 445 VAL VAL A . n A 1 103 PHE 103 446 446 PHE PHE A . n A 1 104 GLU 104 447 447 GLU GLU A . n A 1 105 PHE 105 448 448 PHE PHE A . n A 1 106 ARG 106 449 449 ARG ARG A . n A 1 107 TYR 107 450 450 TYR TYR A . n A 1 108 ALA 108 451 451 ALA ALA A . n A 1 109 LYS 109 452 452 LYS LYS A . n A 1 110 MET 110 453 453 MET MET A . n A 1 111 PRO 111 454 454 PRO PRO A . n A 1 112 ASP 112 455 455 ASP ASP A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EPE 1 300 300 EPE EPE A . C 3 HOH 1 456 1 HOH HOH A . C 3 HOH 2 457 2 HOH HOH A . C 3 HOH 3 458 3 HOH HOH A . C 3 HOH 4 459 4 HOH HOH A . C 3 HOH 5 460 5 HOH HOH A . C 3 HOH 6 461 6 HOH HOH A . C 3 HOH 7 462 7 HOH HOH A . C 3 HOH 8 463 8 HOH HOH A . C 3 HOH 9 464 10 HOH HOH A . C 3 HOH 10 465 11 HOH HOH A . C 3 HOH 11 466 12 HOH HOH A . C 3 HOH 12 467 13 HOH HOH A . C 3 HOH 13 468 14 HOH HOH A . C 3 HOH 14 469 15 HOH HOH A . C 3 HOH 15 470 16 HOH HOH A . C 3 HOH 16 471 17 HOH HOH A . C 3 HOH 17 472 18 HOH HOH A . C 3 HOH 18 473 19 HOH HOH A . C 3 HOH 19 474 20 HOH HOH A . C 3 HOH 20 475 21 HOH HOH A . C 3 HOH 21 476 22 HOH HOH A . C 3 HOH 22 477 23 HOH HOH A . C 3 HOH 23 478 25 HOH HOH A . C 3 HOH 24 479 26 HOH HOH A . C 3 HOH 25 480 27 HOH HOH A . C 3 HOH 26 481 28 HOH HOH A . C 3 HOH 27 482 29 HOH HOH A . C 3 HOH 28 483 31 HOH HOH A . C 3 HOH 29 484 32 HOH HOH A . C 3 HOH 30 485 33 HOH HOH A . C 3 HOH 31 486 34 HOH HOH A . C 3 HOH 32 487 35 HOH HOH A . C 3 HOH 33 488 36 HOH HOH A . C 3 HOH 34 489 37 HOH HOH A . C 3 HOH 35 490 38 HOH HOH A . C 3 HOH 36 491 39 HOH HOH A . C 3 HOH 37 492 40 HOH HOH A . C 3 HOH 38 493 41 HOH HOH A . C 3 HOH 39 494 42 HOH HOH A . C 3 HOH 40 495 43 HOH HOH A . C 3 HOH 41 496 44 HOH HOH A . C 3 HOH 42 497 45 HOH HOH A . C 3 HOH 43 498 46 HOH HOH A . C 3 HOH 44 499 48 HOH HOH A . C 3 HOH 45 500 49 HOH HOH A . C 3 HOH 46 501 50 HOH HOH A . C 3 HOH 47 502 51 HOH HOH A . C 3 HOH 48 503 52 HOH HOH A . C 3 HOH 49 504 54 HOH HOH A . C 3 HOH 50 505 55 HOH HOH A . C 3 HOH 51 506 56 HOH HOH A . C 3 HOH 52 507 57 HOH HOH A . C 3 HOH 53 508 58 HOH HOH A . C 3 HOH 54 509 59 HOH HOH A . C 3 HOH 55 510 60 HOH HOH A . C 3 HOH 56 511 61 HOH HOH A . C 3 HOH 57 512 62 HOH HOH A . C 3 HOH 58 513 63 HOH HOH A . C 3 HOH 59 514 64 HOH HOH A . C 3 HOH 60 515 65 HOH HOH A . C 3 HOH 61 516 66 HOH HOH A . C 3 HOH 62 517 67 HOH HOH A . C 3 HOH 63 518 68 HOH HOH A . C 3 HOH 64 519 69 HOH HOH A . C 3 HOH 65 520 70 HOH HOH A . C 3 HOH 66 521 71 HOH HOH A . C 3 HOH 67 522 72 HOH HOH A . C 3 HOH 68 523 73 HOH HOH A . C 3 HOH 69 524 74 HOH HOH A . C 3 HOH 70 525 75 HOH HOH A . C 3 HOH 71 526 76 HOH HOH A . C 3 HOH 72 527 77 HOH HOH A . C 3 HOH 73 528 78 HOH HOH A . C 3 HOH 74 529 79 HOH HOH A . C 3 HOH 75 530 80 HOH HOH A . C 3 HOH 76 531 81 HOH HOH A . C 3 HOH 77 532 82 HOH HOH A . C 3 HOH 78 533 83 HOH HOH A . C 3 HOH 79 534 84 HOH HOH A . C 3 HOH 80 535 86 HOH HOH A . C 3 HOH 81 536 87 HOH HOH A . C 3 HOH 82 537 88 HOH HOH A . C 3 HOH 83 538 89 HOH HOH A . C 3 HOH 84 539 90 HOH HOH A . C 3 HOH 85 540 91 HOH HOH A . C 3 HOH 86 541 92 HOH HOH A . C 3 HOH 87 542 93 HOH HOH A . C 3 HOH 88 543 94 HOH HOH A . C 3 HOH 89 544 95 HOH HOH A . C 3 HOH 90 545 96 HOH HOH A . C 3 HOH 91 546 99 HOH HOH A . C 3 HOH 92 547 100 HOH HOH A . C 3 HOH 93 548 101 HOH HOH A . C 3 HOH 94 549 102 HOH HOH A . C 3 HOH 95 550 103 HOH HOH A . C 3 HOH 96 551 104 HOH HOH A . C 3 HOH 97 552 105 HOH HOH A . C 3 HOH 98 553 106 HOH HOH A . C 3 HOH 99 554 107 HOH HOH A . C 3 HOH 100 555 108 HOH HOH A . C 3 HOH 101 556 109 HOH HOH A . C 3 HOH 102 557 110 HOH HOH A . C 3 HOH 103 558 111 HOH HOH A . C 3 HOH 104 559 112 HOH HOH A . C 3 HOH 105 560 113 HOH HOH A . C 3 HOH 106 561 114 HOH HOH A . C 3 HOH 107 562 115 HOH HOH A . C 3 HOH 108 563 116 HOH HOH A . C 3 HOH 109 564 117 HOH HOH A . C 3 HOH 110 565 118 HOH HOH A . C 3 HOH 111 566 119 HOH HOH A . C 3 HOH 112 567 120 HOH HOH A . C 3 HOH 113 568 121 HOH HOH A . C 3 HOH 114 569 122 HOH HOH A . C 3 HOH 115 570 123 HOH HOH A . C 3 HOH 116 571 124 HOH HOH A . C 3 HOH 117 572 125 HOH HOH A . C 3 HOH 118 573 126 HOH HOH A . C 3 HOH 119 574 130 HOH HOH A . C 3 HOH 120 575 131 HOH HOH A . C 3 HOH 121 576 132 HOH HOH A . C 3 HOH 122 577 133 HOH HOH A . C 3 HOH 123 578 134 HOH HOH A . C 3 HOH 124 579 135 HOH HOH A . C 3 HOH 125 580 136 HOH HOH A . C 3 HOH 126 581 138 HOH HOH A . C 3 HOH 127 582 139 HOH HOH A . C 3 HOH 128 583 140 HOH HOH A . C 3 HOH 129 584 141 HOH HOH A . C 3 HOH 130 585 142 HOH HOH A . C 3 HOH 131 586 143 HOH HOH A . C 3 HOH 132 587 144 HOH HOH A . C 3 HOH 133 588 145 HOH HOH A . C 3 HOH 134 589 146 HOH HOH A . C 3 HOH 135 590 148 HOH HOH A . C 3 HOH 136 591 149 HOH HOH A . C 3 HOH 137 592 150 HOH HOH A . C 3 HOH 138 593 151 HOH HOH A . C 3 HOH 139 594 152 HOH HOH A . C 3 HOH 140 595 153 HOH HOH A . C 3 HOH 141 596 154 HOH HOH A . C 3 HOH 142 597 155 HOH HOH A . C 3 HOH 143 598 156 HOH HOH A . C 3 HOH 144 599 157 HOH HOH A . C 3 HOH 145 600 158 HOH HOH A . C 3 HOH 146 601 159 HOH HOH A . C 3 HOH 147 602 160 HOH HOH A . C 3 HOH 148 603 161 HOH HOH A . C 3 HOH 149 604 162 HOH HOH A . C 3 HOH 150 605 163 HOH HOH A . C 3 HOH 151 606 164 HOH HOH A . C 3 HOH 152 607 165 HOH HOH A . C 3 HOH 153 608 166 HOH HOH A . C 3 HOH 154 609 167 HOH HOH A . C 3 HOH 155 610 168 HOH HOH A . C 3 HOH 156 611 169 HOH HOH A . C 3 HOH 157 612 170 HOH HOH A . C 3 HOH 158 613 171 HOH HOH A . C 3 HOH 159 614 172 HOH HOH A . C 3 HOH 160 615 173 HOH HOH A . C 3 HOH 161 616 174 HOH HOH A . C 3 HOH 162 617 175 HOH HOH A . C 3 HOH 163 618 176 HOH HOH A . C 3 HOH 164 619 177 HOH HOH A . C 3 HOH 165 620 178 HOH HOH A . C 3 HOH 166 621 179 HOH HOH A . C 3 HOH 167 622 180 HOH HOH A . C 3 HOH 168 623 181 HOH HOH A . C 3 HOH 169 624 182 HOH HOH A . C 3 HOH 170 625 183 HOH HOH A . C 3 HOH 171 626 184 HOH HOH A . C 3 HOH 172 627 185 HOH HOH A . C 3 HOH 173 628 186 HOH HOH A . C 3 HOH 174 629 187 HOH HOH A . C 3 HOH 175 630 188 HOH HOH A . C 3 HOH 176 631 189 HOH HOH A . C 3 HOH 177 632 190 HOH HOH A . C 3 HOH 178 633 191 HOH HOH A . C 3 HOH 179 634 192 HOH HOH A . C 3 HOH 180 635 193 HOH HOH A . C 3 HOH 181 636 194 HOH HOH A . C 3 HOH 182 637 195 HOH HOH A . C 3 HOH 183 638 196 HOH HOH A . C 3 HOH 184 639 197 HOH HOH A . C 3 HOH 185 640 198 HOH HOH A . C 3 HOH 186 641 199 HOH HOH A . C 3 HOH 187 642 200 HOH HOH A . C 3 HOH 188 643 201 HOH HOH A . C 3 HOH 189 644 202 HOH HOH A . C 3 HOH 190 645 203 HOH HOH A . C 3 HOH 191 646 204 HOH HOH A . C 3 HOH 192 647 205 HOH HOH A . C 3 HOH 193 648 206 HOH HOH A . C 3 HOH 194 649 207 HOH HOH A . C 3 HOH 195 650 208 HOH HOH A . C 3 HOH 196 651 209 HOH HOH A . C 3 HOH 197 652 210 HOH HOH A . C 3 HOH 198 653 211 HOH HOH A . C 3 HOH 199 654 212 HOH HOH A . C 3 HOH 200 655 213 HOH HOH A . C 3 HOH 201 656 214 HOH HOH A . C 3 HOH 202 657 215 HOH HOH A . C 3 HOH 203 658 216 HOH HOH A . C 3 HOH 204 659 217 HOH HOH A . C 3 HOH 205 660 218 HOH HOH A . C 3 HOH 206 661 219 HOH HOH A . C 3 HOH 207 662 220 HOH HOH A . C 3 HOH 208 663 221 HOH HOH A . C 3 HOH 209 664 222 HOH HOH A . C 3 HOH 210 665 223 HOH HOH A . C 3 HOH 211 666 224 HOH HOH A . C 3 HOH 212 667 225 HOH HOH A . C 3 HOH 213 668 226 HOH HOH A . C 3 HOH 214 669 227 HOH HOH A . C 3 HOH 215 670 228 HOH HOH A . C 3 HOH 216 671 229 HOH HOH A . C 3 HOH 217 672 230 HOH HOH A . C 3 HOH 218 673 231 HOH HOH A . C 3 HOH 219 674 232 HOH HOH A . C 3 HOH 220 675 233 HOH HOH A . C 3 HOH 221 676 234 HOH HOH A . C 3 HOH 222 677 235 HOH HOH A . C 3 HOH 223 678 236 HOH HOH A . C 3 HOH 224 679 237 HOH HOH A . C 3 HOH 225 680 238 HOH HOH A . C 3 HOH 226 681 239 HOH HOH A . C 3 HOH 227 682 240 HOH HOH A . C 3 HOH 228 683 241 HOH HOH A . C 3 HOH 229 684 242 HOH HOH A . C 3 HOH 230 685 243 HOH HOH A . C 3 HOH 231 686 244 HOH HOH A . C 3 HOH 232 687 245 HOH HOH A . C 3 HOH 233 688 246 HOH HOH A . C 3 HOH 234 689 247 HOH HOH A . C 3 HOH 235 690 248 HOH HOH A . C 3 HOH 236 691 249 HOH HOH A . C 3 HOH 237 692 250 HOH HOH A . C 3 HOH 238 693 251 HOH HOH A . C 3 HOH 239 694 252 HOH HOH A . C 3 HOH 240 695 253 HOH HOH A . C 3 HOH 241 696 254 HOH HOH A . C 3 HOH 242 697 255 HOH HOH A . C 3 HOH 243 698 256 HOH HOH A . C 3 HOH 244 699 257 HOH HOH A . C 3 HOH 245 700 258 HOH HOH A . C 3 HOH 246 701 259 HOH HOH A . C 3 HOH 247 702 260 HOH HOH A . C 3 HOH 248 703 261 HOH HOH A . C 3 HOH 249 704 262 HOH HOH A . C 3 HOH 250 705 263 HOH HOH A . C 3 HOH 251 706 264 HOH HOH A . C 3 HOH 252 707 265 HOH HOH A . C 3 HOH 253 708 266 HOH HOH A . C 3 HOH 254 709 267 HOH HOH A . C 3 HOH 255 710 268 HOH HOH A . C 3 HOH 256 711 269 HOH HOH A . C 3 HOH 257 712 270 HOH HOH A . C 3 HOH 258 713 271 HOH HOH A . C 3 HOH 259 714 272 HOH HOH A . C 3 HOH 260 715 273 HOH HOH A . C 3 HOH 261 716 274 HOH HOH A . C 3 HOH 262 717 275 HOH HOH A . C 3 HOH 263 718 276 HOH HOH A . C 3 HOH 264 719 277 HOH HOH A . C 3 HOH 265 720 278 HOH HOH A . C 3 HOH 266 721 279 HOH HOH A . C 3 HOH 267 722 280 HOH HOH A . C 3 HOH 268 723 281 HOH HOH A . C 3 HOH 269 724 282 HOH HOH A . C 3 HOH 270 725 283 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-08-07 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MOLREP phasing . ? 1 CNS refinement 1.1 ? 2 HKL-2000 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O2S _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 EPE _pdbx_validate_close_contact.auth_seq_id_1 300 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 641 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.86 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id SER _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 2 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -88.02 _pdbx_validate_torsion.psi 33.65 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A SER 2 ? OG ? A SER 2 OG 2 1 Y 1 A HIS 3 ? CG ? A HIS 3 CG 3 1 Y 1 A HIS 3 ? ND1 ? A HIS 3 ND1 4 1 Y 1 A HIS 3 ? CD2 ? A HIS 3 CD2 5 1 Y 1 A HIS 3 ? CE1 ? A HIS 3 CE1 6 1 Y 1 A HIS 3 ? NE2 ? A HIS 3 NE2 7 1 Y 1 A MET 4 ? CG ? A MET 4 CG 8 1 Y 1 A MET 4 ? SD ? A MET 4 SD 9 1 Y 1 A MET 4 ? CE ? A MET 4 CE 10 1 Y 1 A ASP 455 ? CG ? A ASP 112 CG 11 1 Y 1 A ASP 455 ? OD1 ? A ASP 112 OD1 12 1 Y 1 A ASP 455 ? OD2 ? A ASP 112 OD2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EPE N1 N N N 88 EPE C2 C N N 89 EPE C3 C N N 90 EPE N4 N N N 91 EPE C5 C N N 92 EPE C6 C N N 93 EPE C7 C N N 94 EPE C8 C N N 95 EPE O8 O N N 96 EPE C9 C N N 97 EPE C10 C N N 98 EPE S S N N 99 EPE O1S O N N 100 EPE O2S O N N 101 EPE O3S O N N 102 EPE H21 H N N 103 EPE H22 H N N 104 EPE H31 H N N 105 EPE H32 H N N 106 EPE H51 H N N 107 EPE H52 H N N 108 EPE H61 H N N 109 EPE H62 H N N 110 EPE H71 H N N 111 EPE H72 H N N 112 EPE H81 H N N 113 EPE H82 H N N 114 EPE HO8 H N N 115 EPE H91 H N N 116 EPE H92 H N N 117 EPE H101 H N N 118 EPE H102 H N N 119 EPE HOS3 H N N 120 GLN N N N N 121 GLN CA C N S 122 GLN C C N N 123 GLN O O N N 124 GLN CB C N N 125 GLN CG C N N 126 GLN CD C N N 127 GLN OE1 O N N 128 GLN NE2 N N N 129 GLN OXT O N N 130 GLN H H N N 131 GLN H2 H N N 132 GLN HA H N N 133 GLN HB2 H N N 134 GLN HB3 H N N 135 GLN HG2 H N N 136 GLN HG3 H N N 137 GLN HE21 H N N 138 GLN HE22 H N N 139 GLN HXT H N N 140 GLU N N N N 141 GLU CA C N S 142 GLU C C N N 143 GLU O O N N 144 GLU CB C N N 145 GLU CG C N N 146 GLU CD C N N 147 GLU OE1 O N N 148 GLU OE2 O N N 149 GLU OXT O N N 150 GLU H H N N 151 GLU H2 H N N 152 GLU HA H N N 153 GLU HB2 H N N 154 GLU HB3 H N N 155 GLU HG2 H N N 156 GLU HG3 H N N 157 GLU HE2 H N N 158 GLU HXT H N N 159 GLY N N N N 160 GLY CA C N N 161 GLY C C N N 162 GLY O O N N 163 GLY OXT O N N 164 GLY H H N N 165 GLY H2 H N N 166 GLY HA2 H N N 167 GLY HA3 H N N 168 GLY HXT H N N 169 HIS N N N N 170 HIS CA C N S 171 HIS C C N N 172 HIS O O N N 173 HIS CB C N N 174 HIS CG C Y N 175 HIS ND1 N Y N 176 HIS CD2 C Y N 177 HIS CE1 C Y N 178 HIS NE2 N Y N 179 HIS OXT O N N 180 HIS H H N N 181 HIS H2 H N N 182 HIS HA H N N 183 HIS HB2 H N N 184 HIS HB3 H N N 185 HIS HD1 H N N 186 HIS HD2 H N N 187 HIS HE1 H N N 188 HIS HE2 H N N 189 HIS HXT H N N 190 HOH O O N N 191 HOH H1 H N N 192 HOH H2 H N N 193 ILE N N N N 194 ILE CA C N S 195 ILE C C N N 196 ILE O O N N 197 ILE CB C N S 198 ILE CG1 C N N 199 ILE CG2 C N N 200 ILE CD1 C N N 201 ILE OXT O N N 202 ILE H H N N 203 ILE H2 H N N 204 ILE HA H N N 205 ILE HB H N N 206 ILE HG12 H N N 207 ILE HG13 H N N 208 ILE HG21 H N N 209 ILE HG22 H N N 210 ILE HG23 H N N 211 ILE HD11 H N N 212 ILE HD12 H N N 213 ILE HD13 H N N 214 ILE HXT H N N 215 LEU N N N N 216 LEU CA C N S 217 LEU C C N N 218 LEU O O N N 219 LEU CB C N N 220 LEU CG C N N 221 LEU CD1 C N N 222 LEU CD2 C N N 223 LEU OXT O N N 224 LEU H H N N 225 LEU H2 H N N 226 LEU HA H N N 227 LEU HB2 H N N 228 LEU HB3 H N N 229 LEU HG H N N 230 LEU HD11 H N N 231 LEU HD12 H N N 232 LEU HD13 H N N 233 LEU HD21 H N N 234 LEU HD22 H N N 235 LEU HD23 H N N 236 LEU HXT H N N 237 LYS N N N N 238 LYS CA C N S 239 LYS C C N N 240 LYS O O N N 241 LYS CB C N N 242 LYS CG C N N 243 LYS CD C N N 244 LYS CE C N N 245 LYS NZ N N N 246 LYS OXT O N N 247 LYS H H N N 248 LYS H2 H N N 249 LYS HA H N N 250 LYS HB2 H N N 251 LYS HB3 H N N 252 LYS HG2 H N N 253 LYS HG3 H N N 254 LYS HD2 H N N 255 LYS HD3 H N N 256 LYS HE2 H N N 257 LYS HE3 H N N 258 LYS HZ1 H N N 259 LYS HZ2 H N N 260 LYS HZ3 H N N 261 LYS HXT H N N 262 MET N N N N 263 MET CA C N S 264 MET C C N N 265 MET O O N N 266 MET CB C N N 267 MET CG C N N 268 MET SD S N N 269 MET CE C N N 270 MET OXT O N N 271 MET H H N N 272 MET H2 H N N 273 MET HA H N N 274 MET HB2 H N N 275 MET HB3 H N N 276 MET HG2 H N N 277 MET HG3 H N N 278 MET HE1 H N N 279 MET HE2 H N N 280 MET HE3 H N N 281 MET HXT H N N 282 PHE N N N N 283 PHE CA C N S 284 PHE C C N N 285 PHE O O N N 286 PHE CB C N N 287 PHE CG C Y N 288 PHE CD1 C Y N 289 PHE CD2 C Y N 290 PHE CE1 C Y N 291 PHE CE2 C Y N 292 PHE CZ C Y N 293 PHE OXT O N N 294 PHE H H N N 295 PHE H2 H N N 296 PHE HA H N N 297 PHE HB2 H N N 298 PHE HB3 H N N 299 PHE HD1 H N N 300 PHE HD2 H N N 301 PHE HE1 H N N 302 PHE HE2 H N N 303 PHE HZ H N N 304 PHE HXT H N N 305 PRO N N N N 306 PRO CA C N S 307 PRO C C N N 308 PRO O O N N 309 PRO CB C N N 310 PRO CG C N N 311 PRO CD C N N 312 PRO OXT O N N 313 PRO H H N N 314 PRO HA H N N 315 PRO HB2 H N N 316 PRO HB3 H N N 317 PRO HG2 H N N 318 PRO HG3 H N N 319 PRO HD2 H N N 320 PRO HD3 H N N 321 PRO HXT H N N 322 SER N N N N 323 SER CA C N S 324 SER C C N N 325 SER O O N N 326 SER CB C N N 327 SER OG O N N 328 SER OXT O N N 329 SER H H N N 330 SER H2 H N N 331 SER HA H N N 332 SER HB2 H N N 333 SER HB3 H N N 334 SER HG H N N 335 SER HXT H N N 336 THR N N N N 337 THR CA C N S 338 THR C C N N 339 THR O O N N 340 THR CB C N R 341 THR OG1 O N N 342 THR CG2 C N N 343 THR OXT O N N 344 THR H H N N 345 THR H2 H N N 346 THR HA H N N 347 THR HB H N N 348 THR HG1 H N N 349 THR HG21 H N N 350 THR HG22 H N N 351 THR HG23 H N N 352 THR HXT H N N 353 TRP N N N N 354 TRP CA C N S 355 TRP C C N N 356 TRP O O N N 357 TRP CB C N N 358 TRP CG C Y N 359 TRP CD1 C Y N 360 TRP CD2 C Y N 361 TRP NE1 N Y N 362 TRP CE2 C Y N 363 TRP CE3 C Y N 364 TRP CZ2 C Y N 365 TRP CZ3 C Y N 366 TRP CH2 C Y N 367 TRP OXT O N N 368 TRP H H N N 369 TRP H2 H N N 370 TRP HA H N N 371 TRP HB2 H N N 372 TRP HB3 H N N 373 TRP HD1 H N N 374 TRP HE1 H N N 375 TRP HE3 H N N 376 TRP HZ2 H N N 377 TRP HZ3 H N N 378 TRP HH2 H N N 379 TRP HXT H N N 380 TYR N N N N 381 TYR CA C N S 382 TYR C C N N 383 TYR O O N N 384 TYR CB C N N 385 TYR CG C Y N 386 TYR CD1 C Y N 387 TYR CD2 C Y N 388 TYR CE1 C Y N 389 TYR CE2 C Y N 390 TYR CZ C Y N 391 TYR OH O N N 392 TYR OXT O N N 393 TYR H H N N 394 TYR H2 H N N 395 TYR HA H N N 396 TYR HB2 H N N 397 TYR HB3 H N N 398 TYR HD1 H N N 399 TYR HD2 H N N 400 TYR HE1 H N N 401 TYR HE2 H N N 402 TYR HH H N N 403 TYR HXT H N N 404 VAL N N N N 405 VAL CA C N S 406 VAL C C N N 407 VAL O O N N 408 VAL CB C N N 409 VAL CG1 C N N 410 VAL CG2 C N N 411 VAL OXT O N N 412 VAL H H N N 413 VAL H2 H N N 414 VAL HA H N N 415 VAL HB H N N 416 VAL HG11 H N N 417 VAL HG12 H N N 418 VAL HG13 H N N 419 VAL HG21 H N N 420 VAL HG22 H N N 421 VAL HG23 H N N 422 VAL HXT H N N 423 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EPE N1 C2 sing N N 83 EPE N1 C6 sing N N 84 EPE N1 C9 sing N N 85 EPE C2 C3 sing N N 86 EPE C2 H21 sing N N 87 EPE C2 H22 sing N N 88 EPE C3 N4 sing N N 89 EPE C3 H31 sing N N 90 EPE C3 H32 sing N N 91 EPE N4 C5 sing N N 92 EPE N4 C7 sing N N 93 EPE C5 C6 sing N N 94 EPE C5 H51 sing N N 95 EPE C5 H52 sing N N 96 EPE C6 H61 sing N N 97 EPE C6 H62 sing N N 98 EPE C7 C8 sing N N 99 EPE C7 H71 sing N N 100 EPE C7 H72 sing N N 101 EPE C8 O8 sing N N 102 EPE C8 H81 sing N N 103 EPE C8 H82 sing N N 104 EPE O8 HO8 sing N N 105 EPE C9 C10 sing N N 106 EPE C9 H91 sing N N 107 EPE C9 H92 sing N N 108 EPE C10 S sing N N 109 EPE C10 H101 sing N N 110 EPE C10 H102 sing N N 111 EPE S O1S doub N N 112 EPE S O2S doub N N 113 EPE S O3S sing N N 114 EPE O3S HOS3 sing N N 115 GLN N CA sing N N 116 GLN N H sing N N 117 GLN N H2 sing N N 118 GLN CA C sing N N 119 GLN CA CB sing N N 120 GLN CA HA sing N N 121 GLN C O doub N N 122 GLN C OXT sing N N 123 GLN CB CG sing N N 124 GLN CB HB2 sing N N 125 GLN CB HB3 sing N N 126 GLN CG CD sing N N 127 GLN CG HG2 sing N N 128 GLN CG HG3 sing N N 129 GLN CD OE1 doub N N 130 GLN CD NE2 sing N N 131 GLN NE2 HE21 sing N N 132 GLN NE2 HE22 sing N N 133 GLN OXT HXT sing N N 134 GLU N CA sing N N 135 GLU N H sing N N 136 GLU N H2 sing N N 137 GLU CA C sing N N 138 GLU CA CB sing N N 139 GLU CA HA sing N N 140 GLU C O doub N N 141 GLU C OXT sing N N 142 GLU CB CG sing N N 143 GLU CB HB2 sing N N 144 GLU CB HB3 sing N N 145 GLU CG CD sing N N 146 GLU CG HG2 sing N N 147 GLU CG HG3 sing N N 148 GLU CD OE1 doub N N 149 GLU CD OE2 sing N N 150 GLU OE2 HE2 sing N N 151 GLU OXT HXT sing N N 152 GLY N CA sing N N 153 GLY N H sing N N 154 GLY N H2 sing N N 155 GLY CA C sing N N 156 GLY CA HA2 sing N N 157 GLY CA HA3 sing N N 158 GLY C O doub N N 159 GLY C OXT sing N N 160 GLY OXT HXT sing N N 161 HIS N CA sing N N 162 HIS N H sing N N 163 HIS N H2 sing N N 164 HIS CA C sing N N 165 HIS CA CB sing N N 166 HIS CA HA sing N N 167 HIS C O doub N N 168 HIS C OXT sing N N 169 HIS CB CG sing N N 170 HIS CB HB2 sing N N 171 HIS CB HB3 sing N N 172 HIS CG ND1 sing Y N 173 HIS CG CD2 doub Y N 174 HIS ND1 CE1 doub Y N 175 HIS ND1 HD1 sing N N 176 HIS CD2 NE2 sing Y N 177 HIS CD2 HD2 sing N N 178 HIS CE1 NE2 sing Y N 179 HIS CE1 HE1 sing N N 180 HIS NE2 HE2 sing N N 181 HIS OXT HXT sing N N 182 HOH O H1 sing N N 183 HOH O H2 sing N N 184 ILE N CA sing N N 185 ILE N H sing N N 186 ILE N H2 sing N N 187 ILE CA C sing N N 188 ILE CA CB sing N N 189 ILE CA HA sing N N 190 ILE C O doub N N 191 ILE C OXT sing N N 192 ILE CB CG1 sing N N 193 ILE CB CG2 sing N N 194 ILE CB HB sing N N 195 ILE CG1 CD1 sing N N 196 ILE CG1 HG12 sing N N 197 ILE CG1 HG13 sing N N 198 ILE CG2 HG21 sing N N 199 ILE CG2 HG22 sing N N 200 ILE CG2 HG23 sing N N 201 ILE CD1 HD11 sing N N 202 ILE CD1 HD12 sing N N 203 ILE CD1 HD13 sing N N 204 ILE OXT HXT sing N N 205 LEU N CA sing N N 206 LEU N H sing N N 207 LEU N H2 sing N N 208 LEU CA C sing N N 209 LEU CA CB sing N N 210 LEU CA HA sing N N 211 LEU C O doub N N 212 LEU C OXT sing N N 213 LEU CB CG sing N N 214 LEU CB HB2 sing N N 215 LEU CB HB3 sing N N 216 LEU CG CD1 sing N N 217 LEU CG CD2 sing N N 218 LEU CG HG sing N N 219 LEU CD1 HD11 sing N N 220 LEU CD1 HD12 sing N N 221 LEU CD1 HD13 sing N N 222 LEU CD2 HD21 sing N N 223 LEU CD2 HD22 sing N N 224 LEU CD2 HD23 sing N N 225 LEU OXT HXT sing N N 226 LYS N CA sing N N 227 LYS N H sing N N 228 LYS N H2 sing N N 229 LYS CA C sing N N 230 LYS CA CB sing N N 231 LYS CA HA sing N N 232 LYS C O doub N N 233 LYS C OXT sing N N 234 LYS CB CG sing N N 235 LYS CB HB2 sing N N 236 LYS CB HB3 sing N N 237 LYS CG CD sing N N 238 LYS CG HG2 sing N N 239 LYS CG HG3 sing N N 240 LYS CD CE sing N N 241 LYS CD HD2 sing N N 242 LYS CD HD3 sing N N 243 LYS CE NZ sing N N 244 LYS CE HE2 sing N N 245 LYS CE HE3 sing N N 246 LYS NZ HZ1 sing N N 247 LYS NZ HZ2 sing N N 248 LYS NZ HZ3 sing N N 249 LYS OXT HXT sing N N 250 MET N CA sing N N 251 MET N H sing N N 252 MET N H2 sing N N 253 MET CA C sing N N 254 MET CA CB sing N N 255 MET CA HA sing N N 256 MET C O doub N N 257 MET C OXT sing N N 258 MET CB CG sing N N 259 MET CB HB2 sing N N 260 MET CB HB3 sing N N 261 MET CG SD sing N N 262 MET CG HG2 sing N N 263 MET CG HG3 sing N N 264 MET SD CE sing N N 265 MET CE HE1 sing N N 266 MET CE HE2 sing N N 267 MET CE HE3 sing N N 268 MET OXT HXT sing N N 269 PHE N CA sing N N 270 PHE N H sing N N 271 PHE N H2 sing N N 272 PHE CA C sing N N 273 PHE CA CB sing N N 274 PHE CA HA sing N N 275 PHE C O doub N N 276 PHE C OXT sing N N 277 PHE CB CG sing N N 278 PHE CB HB2 sing N N 279 PHE CB HB3 sing N N 280 PHE CG CD1 doub Y N 281 PHE CG CD2 sing Y N 282 PHE CD1 CE1 sing Y N 283 PHE CD1 HD1 sing N N 284 PHE CD2 CE2 doub Y N 285 PHE CD2 HD2 sing N N 286 PHE CE1 CZ doub Y N 287 PHE CE1 HE1 sing N N 288 PHE CE2 CZ sing Y N 289 PHE CE2 HE2 sing N N 290 PHE CZ HZ sing N N 291 PHE OXT HXT sing N N 292 PRO N CA sing N N 293 PRO N CD sing N N 294 PRO N H sing N N 295 PRO CA C sing N N 296 PRO CA CB sing N N 297 PRO CA HA sing N N 298 PRO C O doub N N 299 PRO C OXT sing N N 300 PRO CB CG sing N N 301 PRO CB HB2 sing N N 302 PRO CB HB3 sing N N 303 PRO CG CD sing N N 304 PRO CG HG2 sing N N 305 PRO CG HG3 sing N N 306 PRO CD HD2 sing N N 307 PRO CD HD3 sing N N 308 PRO OXT HXT sing N N 309 SER N CA sing N N 310 SER N H sing N N 311 SER N H2 sing N N 312 SER CA C sing N N 313 SER CA CB sing N N 314 SER CA HA sing N N 315 SER C O doub N N 316 SER C OXT sing N N 317 SER CB OG sing N N 318 SER CB HB2 sing N N 319 SER CB HB3 sing N N 320 SER OG HG sing N N 321 SER OXT HXT sing N N 322 THR N CA sing N N 323 THR N H sing N N 324 THR N H2 sing N N 325 THR CA C sing N N 326 THR CA CB sing N N 327 THR CA HA sing N N 328 THR C O doub N N 329 THR C OXT sing N N 330 THR CB OG1 sing N N 331 THR CB CG2 sing N N 332 THR CB HB sing N N 333 THR OG1 HG1 sing N N 334 THR CG2 HG21 sing N N 335 THR CG2 HG22 sing N N 336 THR CG2 HG23 sing N N 337 THR OXT HXT sing N N 338 TRP N CA sing N N 339 TRP N H sing N N 340 TRP N H2 sing N N 341 TRP CA C sing N N 342 TRP CA CB sing N N 343 TRP CA HA sing N N 344 TRP C O doub N N 345 TRP C OXT sing N N 346 TRP CB CG sing N N 347 TRP CB HB2 sing N N 348 TRP CB HB3 sing N N 349 TRP CG CD1 doub Y N 350 TRP CG CD2 sing Y N 351 TRP CD1 NE1 sing Y N 352 TRP CD1 HD1 sing N N 353 TRP CD2 CE2 doub Y N 354 TRP CD2 CE3 sing Y N 355 TRP NE1 CE2 sing Y N 356 TRP NE1 HE1 sing N N 357 TRP CE2 CZ2 sing Y N 358 TRP CE3 CZ3 doub Y N 359 TRP CE3 HE3 sing N N 360 TRP CZ2 CH2 doub Y N 361 TRP CZ2 HZ2 sing N N 362 TRP CZ3 CH2 sing Y N 363 TRP CZ3 HZ3 sing N N 364 TRP CH2 HH2 sing N N 365 TRP OXT HXT sing N N 366 TYR N CA sing N N 367 TYR N H sing N N 368 TYR N H2 sing N N 369 TYR CA C sing N N 370 TYR CA CB sing N N 371 TYR CA HA sing N N 372 TYR C O doub N N 373 TYR C OXT sing N N 374 TYR CB CG sing N N 375 TYR CB HB2 sing N N 376 TYR CB HB3 sing N N 377 TYR CG CD1 doub Y N 378 TYR CG CD2 sing Y N 379 TYR CD1 CE1 sing Y N 380 TYR CD1 HD1 sing N N 381 TYR CD2 CE2 doub Y N 382 TYR CD2 HD2 sing N N 383 TYR CE1 CZ doub Y N 384 TYR CE1 HE1 sing N N 385 TYR CE2 CZ sing Y N 386 TYR CE2 HE2 sing N N 387 TYR CZ OH sing N N 388 TYR OH HH sing N N 389 TYR OXT HXT sing N N 390 VAL N CA sing N N 391 VAL N H sing N N 392 VAL N H2 sing N N 393 VAL CA C sing N N 394 VAL CA CB sing N N 395 VAL CA HA sing N N 396 VAL C O doub N N 397 VAL C OXT sing N N 398 VAL CB CG1 sing N N 399 VAL CB CG2 sing N N 400 VAL CB HB sing N N 401 VAL CG1 HG11 sing N N 402 VAL CG1 HG12 sing N N 403 VAL CG1 HG13 sing N N 404 VAL CG2 HG21 sing N N 405 VAL CG2 HG22 sing N N 406 VAL CG2 HG23 sing N N 407 VAL OXT HXT sing N N 408 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' EPE 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1X0J _pdbx_initial_refinement_model.details 'BRD2-BD1(PDB entry:1X0J)' #