data_2DWR # _entry.id 2DWR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2DWR pdb_00002dwr 10.2210/pdb2dwr/pdb RCSB RCSB025938 ? ? WWPDB D_1000025938 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-04-03 2 'Structure model' 1 1 2008-04-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-11-10 5 'Structure model' 1 4 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Non-polymer description' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' struct_ref_seq_dif 3 4 'Structure model' struct_site 4 5 'Structure model' chem_comp_atom 5 5 'Structure model' chem_comp_bond 6 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2DWR _pdbx_database_status.recvd_initial_deposition_date 2006-08-16 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2I2S _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _audit_author.name 'Blanchard, H.' _audit_author.pdbx_ordinal 1 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Insight into Host Cell Carbohydrate-recognition by Human and Porcine Rotavirus from Crystal Structures of the Virion Spike Associated Carbohydrate-binding Domain (VP8*) ; J.Mol.Biol. 367 1215 1226 2007 JMOBAK UK 0022-2836 0070 ? 17306299 10.1016/j.jmb.2007.01.028 1 ;Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of the VP8* carbohydrate-binding protein of the human rotavirus strain Wa ; 'Acta Crystallogr.,Sect.F' 61 989 993 2005 ? DK 1744-3091 ? ? 16511215 10.1107/S1744309105032999 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Blanchard, H.' 1 ? primary 'Yu, X.' 2 ? primary 'Coulson, B.S.' 3 ? primary 'von Itzstein, M.' 4 ? 1 'Kraschnefski, M.J.' 5 ? 1 'Scott, S.A.' 6 ? 1 'Holloway, G.' 7 ? 1 'Coulson, B.S.' 8 ? 1 'von Itzstein, M.' 9 ? 1 'Blanchard, H.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Outer capsid protein' 18396.184 1 ? ? 'VP8* domain' ? 2 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 3 non-polymer syn 'ISOPROPYL ALCOHOL' 60.095 2 ? ? ? ? 4 water nat water 18.015 93 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'spike protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MLDGPYQPTTFTPPNDYWILINSNTNGVVYESTNNSDFWTAVVAIEPHVNPVDRQYTIFGESKQFNVSNDSNKWKFLEMF RSSSQNEFYNRRTLTSDTRLVGILKYGGRVWTFHGETPRATTDSSSTANLNNISITIHSEFYIIPRSQESKCNEYINNGL ; _entity_poly.pdbx_seq_one_letter_code_can ;MLDGPYQPTTFTPPNDYWILINSNTNGVVYESTNNSDFWTAVVAIEPHVNPVDRQYTIFGESKQFNVSNDSNKWKFLEMF RSSSQNEFYNRRTLTSDTRLVGILKYGGRVWTFHGETPRATTDSSSTANLNNISITIHSEFYIIPRSQESKCNEYINNGL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 'ISOPROPYL ALCOHOL' IPA 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LEU n 1 3 ASP n 1 4 GLY n 1 5 PRO n 1 6 TYR n 1 7 GLN n 1 8 PRO n 1 9 THR n 1 10 THR n 1 11 PHE n 1 12 THR n 1 13 PRO n 1 14 PRO n 1 15 ASN n 1 16 ASP n 1 17 TYR n 1 18 TRP n 1 19 ILE n 1 20 LEU n 1 21 ILE n 1 22 ASN n 1 23 SER n 1 24 ASN n 1 25 THR n 1 26 ASN n 1 27 GLY n 1 28 VAL n 1 29 VAL n 1 30 TYR n 1 31 GLU n 1 32 SER n 1 33 THR n 1 34 ASN n 1 35 ASN n 1 36 SER n 1 37 ASP n 1 38 PHE n 1 39 TRP n 1 40 THR n 1 41 ALA n 1 42 VAL n 1 43 VAL n 1 44 ALA n 1 45 ILE n 1 46 GLU n 1 47 PRO n 1 48 HIS n 1 49 VAL n 1 50 ASN n 1 51 PRO n 1 52 VAL n 1 53 ASP n 1 54 ARG n 1 55 GLN n 1 56 TYR n 1 57 THR n 1 58 ILE n 1 59 PHE n 1 60 GLY n 1 61 GLU n 1 62 SER n 1 63 LYS n 1 64 GLN n 1 65 PHE n 1 66 ASN n 1 67 VAL n 1 68 SER n 1 69 ASN n 1 70 ASP n 1 71 SER n 1 72 ASN n 1 73 LYS n 1 74 TRP n 1 75 LYS n 1 76 PHE n 1 77 LEU n 1 78 GLU n 1 79 MET n 1 80 PHE n 1 81 ARG n 1 82 SER n 1 83 SER n 1 84 SER n 1 85 GLN n 1 86 ASN n 1 87 GLU n 1 88 PHE n 1 89 TYR n 1 90 ASN n 1 91 ARG n 1 92 ARG n 1 93 THR n 1 94 LEU n 1 95 THR n 1 96 SER n 1 97 ASP n 1 98 THR n 1 99 ARG n 1 100 LEU n 1 101 VAL n 1 102 GLY n 1 103 ILE n 1 104 LEU n 1 105 LYS n 1 106 TYR n 1 107 GLY n 1 108 GLY n 1 109 ARG n 1 110 VAL n 1 111 TRP n 1 112 THR n 1 113 PHE n 1 114 HIS n 1 115 GLY n 1 116 GLU n 1 117 THR n 1 118 PRO n 1 119 ARG n 1 120 ALA n 1 121 THR n 1 122 THR n 1 123 ASP n 1 124 SER n 1 125 SER n 1 126 SER n 1 127 THR n 1 128 ALA n 1 129 ASN n 1 130 LEU n 1 131 ASN n 1 132 ASN n 1 133 ILE n 1 134 SER n 1 135 ILE n 1 136 THR n 1 137 ILE n 1 138 HIS n 1 139 SER n 1 140 GLU n 1 141 PHE n 1 142 TYR n 1 143 ILE n 1 144 ILE n 1 145 PRO n 1 146 ARG n 1 147 SER n 1 148 GLN n 1 149 GLU n 1 150 SER n 1 151 LYS n 1 152 CYS n 1 153 ASN n 1 154 GLU n 1 155 TYR n 1 156 ILE n 1 157 ASN n 1 158 ASN n 1 159 GLY n 1 160 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Rotavirus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species 'Rotavirus A' _entity_src_gen.gene_src_strain 'strain Wa' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Human rotavirus A' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10941 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Bl21 DE3' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pGEX-VP8(64-223)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IPA non-polymer . 'ISOPROPYL ALCOHOL' 2-PROPANOL 'C3 H8 O' 60.095 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 64 64 MET MET A . n A 1 2 LEU 2 65 65 LEU LEU A . n A 1 3 ASP 3 66 66 ASP ASP A . n A 1 4 GLY 4 67 67 GLY GLY A . n A 1 5 PRO 5 68 68 PRO PRO A . n A 1 6 TYR 6 69 69 TYR TYR A . n A 1 7 GLN 7 70 70 GLN GLN A . n A 1 8 PRO 8 71 71 PRO PRO A . n A 1 9 THR 9 72 72 THR THR A . n A 1 10 THR 10 73 73 THR THR A . n A 1 11 PHE 11 74 74 PHE PHE A . n A 1 12 THR 12 75 75 THR THR A . n A 1 13 PRO 13 76 76 PRO PRO A . n A 1 14 PRO 14 77 77 PRO PRO A . n A 1 15 ASN 15 78 78 ASN ASN A . n A 1 16 ASP 16 79 79 ASP ASP A . n A 1 17 TYR 17 80 80 TYR TYR A . n A 1 18 TRP 18 81 81 TRP TRP A . n A 1 19 ILE 19 82 82 ILE ILE A . n A 1 20 LEU 20 83 83 LEU LEU A . n A 1 21 ILE 21 84 84 ILE ILE A . n A 1 22 ASN 22 85 85 ASN ASN A . n A 1 23 SER 23 86 86 SER SER A . n A 1 24 ASN 24 87 87 ASN ASN A . n A 1 25 THR 25 88 88 THR THR A . n A 1 26 ASN 26 89 89 ASN ASN A . n A 1 27 GLY 27 90 90 GLY GLY A . n A 1 28 VAL 28 91 91 VAL VAL A . n A 1 29 VAL 29 92 92 VAL VAL A . n A 1 30 TYR 30 93 93 TYR TYR A . n A 1 31 GLU 31 94 94 GLU GLU A . n A 1 32 SER 32 95 95 SER SER A . n A 1 33 THR 33 96 96 THR THR A . n A 1 34 ASN 34 97 97 ASN ASN A . n A 1 35 ASN 35 98 98 ASN ASN A . n A 1 36 SER 36 99 99 SER SER A . n A 1 37 ASP 37 100 100 ASP ASP A . n A 1 38 PHE 38 101 101 PHE PHE A . n A 1 39 TRP 39 102 102 TRP TRP A . n A 1 40 THR 40 103 103 THR THR A . n A 1 41 ALA 41 104 104 ALA ALA A . n A 1 42 VAL 42 105 105 VAL VAL A . n A 1 43 VAL 43 106 106 VAL VAL A . n A 1 44 ALA 44 107 107 ALA ALA A . n A 1 45 ILE 45 108 108 ILE ILE A . n A 1 46 GLU 46 109 109 GLU GLU A . n A 1 47 PRO 47 110 110 PRO PRO A . n A 1 48 HIS 48 111 111 HIS HIS A . n A 1 49 VAL 49 112 112 VAL VAL A . n A 1 50 ASN 50 113 113 ASN ASN A . n A 1 51 PRO 51 114 114 PRO PRO A . n A 1 52 VAL 52 115 115 VAL VAL A . n A 1 53 ASP 53 116 116 ASP ASP A . n A 1 54 ARG 54 117 117 ARG ARG A . n A 1 55 GLN 55 118 118 GLN GLN A . n A 1 56 TYR 56 119 119 TYR TYR A . n A 1 57 THR 57 120 120 THR THR A . n A 1 58 ILE 58 121 121 ILE ILE A . n A 1 59 PHE 59 122 122 PHE PHE A . n A 1 60 GLY 60 123 123 GLY GLY A . n A 1 61 GLU 61 124 124 GLU GLU A . n A 1 62 SER 62 125 125 SER SER A . n A 1 63 LYS 63 126 126 LYS LYS A . n A 1 64 GLN 64 127 127 GLN GLN A . n A 1 65 PHE 65 128 128 PHE PHE A . n A 1 66 ASN 66 129 129 ASN ASN A . n A 1 67 VAL 67 130 130 VAL VAL A . n A 1 68 SER 68 131 131 SER SER A . n A 1 69 ASN 69 132 132 ASN ASN A . n A 1 70 ASP 70 133 133 ASP ASP A . n A 1 71 SER 71 134 134 SER SER A . n A 1 72 ASN 72 135 135 ASN ASN A . n A 1 73 LYS 73 136 136 LYS LYS A . n A 1 74 TRP 74 137 137 TRP TRP A . n A 1 75 LYS 75 138 138 LYS LYS A . n A 1 76 PHE 76 139 139 PHE PHE A . n A 1 77 LEU 77 140 140 LEU LEU A . n A 1 78 GLU 78 141 141 GLU GLU A . n A 1 79 MET 79 142 142 MET MET A . n A 1 80 PHE 80 143 143 PHE PHE A . n A 1 81 ARG 81 144 144 ARG ARG A . n A 1 82 SER 82 145 145 SER SER A . n A 1 83 SER 83 146 146 SER SER A . n A 1 84 SER 84 147 147 SER SER A . n A 1 85 GLN 85 148 148 GLN GLN A . n A 1 86 ASN 86 149 149 ASN ASN A . n A 1 87 GLU 87 150 150 GLU GLU A . n A 1 88 PHE 88 151 151 PHE PHE A . n A 1 89 TYR 89 152 152 TYR TYR A . n A 1 90 ASN 90 153 153 ASN ASN A . n A 1 91 ARG 91 154 154 ARG ARG A . n A 1 92 ARG 92 155 155 ARG ARG A . n A 1 93 THR 93 156 156 THR THR A . n A 1 94 LEU 94 157 157 LEU LEU A . n A 1 95 THR 95 158 158 THR THR A . n A 1 96 SER 96 159 159 SER SER A . n A 1 97 ASP 97 160 160 ASP ASP A . n A 1 98 THR 98 161 161 THR THR A . n A 1 99 ARG 99 162 162 ARG ARG A . n A 1 100 LEU 100 163 163 LEU LEU A . n A 1 101 VAL 101 164 164 VAL VAL A . n A 1 102 GLY 102 165 165 GLY GLY A . n A 1 103 ILE 103 166 166 ILE ILE A . n A 1 104 LEU 104 167 167 LEU LEU A . n A 1 105 LYS 105 168 168 LYS LYS A . n A 1 106 TYR 106 169 169 TYR TYR A . n A 1 107 GLY 107 170 170 GLY GLY A . n A 1 108 GLY 108 171 171 GLY GLY A . n A 1 109 ARG 109 172 172 ARG ARG A . n A 1 110 VAL 110 173 173 VAL VAL A . n A 1 111 TRP 111 174 174 TRP TRP A . n A 1 112 THR 112 175 175 THR THR A . n A 1 113 PHE 113 176 176 PHE PHE A . n A 1 114 HIS 114 177 177 HIS HIS A . n A 1 115 GLY 115 178 178 GLY GLY A . n A 1 116 GLU 116 179 179 GLU GLU A . n A 1 117 THR 117 180 180 THR THR A . n A 1 118 PRO 118 181 181 PRO PRO A . n A 1 119 ARG 119 182 182 ARG ARG A . n A 1 120 ALA 120 183 183 ALA ALA A . n A 1 121 THR 121 184 184 THR THR A . n A 1 122 THR 122 185 185 THR THR A . n A 1 123 ASP 123 186 186 ASP ASP A . n A 1 124 SER 124 187 187 SER SER A . n A 1 125 SER 125 188 188 SER SER A . n A 1 126 SER 126 189 189 SER SER A . n A 1 127 THR 127 190 190 THR THR A . n A 1 128 ALA 128 191 191 ALA ALA A . n A 1 129 ASN 129 192 192 ASN ASN A . n A 1 130 LEU 130 193 193 LEU LEU A . n A 1 131 ASN 131 194 194 ASN ASN A . n A 1 132 ASN 132 195 195 ASN ASN A . n A 1 133 ILE 133 196 196 ILE ILE A . n A 1 134 SER 134 197 197 SER SER A . n A 1 135 ILE 135 198 198 ILE ILE A . n A 1 136 THR 136 199 199 THR THR A . n A 1 137 ILE 137 200 200 ILE ILE A . n A 1 138 HIS 138 201 201 HIS HIS A . n A 1 139 SER 139 202 202 SER SER A . n A 1 140 GLU 140 203 203 GLU GLU A . n A 1 141 PHE 141 204 204 PHE PHE A . n A 1 142 TYR 142 205 205 TYR TYR A . n A 1 143 ILE 143 206 206 ILE ILE A . n A 1 144 ILE 144 207 207 ILE ILE A . n A 1 145 PRO 145 208 208 PRO PRO A . n A 1 146 ARG 146 209 209 ARG ARG A . n A 1 147 SER 147 210 210 SER SER A . n A 1 148 GLN 148 211 211 GLN GLN A . n A 1 149 GLU 149 212 212 GLU GLU A . n A 1 150 SER 150 213 213 SER SER A . n A 1 151 LYS 151 214 214 LYS LYS A . n A 1 152 CYS 152 215 215 CYS CYS A . n A 1 153 ASN 153 216 216 ASN ASN A . n A 1 154 GLU 154 217 217 GLU GLU A . n A 1 155 TYR 155 218 218 TYR TYR A . n A 1 156 ILE 156 219 219 ILE ILE A . n A 1 157 ASN 157 220 220 ASN ASN A . n A 1 158 ASN 158 221 221 ASN ASN A . n A 1 159 GLY 159 222 222 GLY GLY A . n A 1 160 LEU 160 223 223 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL 1 4000 4000 GOL GOL A . C 2 GOL 1 4001 4000 GOL GOL A . D 3 IPA 1 5000 5000 IPA IOH A . E 3 IPA 1 5001 5000 IPA IOH A . F 4 HOH 1 5002 1 HOH HOH A . F 4 HOH 2 5003 2 HOH HOH A . F 4 HOH 3 5004 3 HOH HOH A . F 4 HOH 4 5005 4 HOH HOH A . F 4 HOH 5 5006 5 HOH HOH A . F 4 HOH 6 5007 6 HOH HOH A . F 4 HOH 7 5008 7 HOH HOH A . F 4 HOH 8 5009 8 HOH HOH A . F 4 HOH 9 5010 9 HOH HOH A . F 4 HOH 10 5011 10 HOH HOH A . F 4 HOH 11 5012 11 HOH HOH A . F 4 HOH 12 5013 12 HOH HOH A . F 4 HOH 13 5014 13 HOH HOH A . F 4 HOH 14 5015 14 HOH HOH A . F 4 HOH 15 5016 15 HOH HOH A . F 4 HOH 16 5017 16 HOH HOH A . F 4 HOH 17 5018 17 HOH HOH A . F 4 HOH 18 5019 18 HOH HOH A . F 4 HOH 19 5020 19 HOH HOH A . F 4 HOH 20 5021 20 HOH HOH A . F 4 HOH 21 5022 21 HOH HOH A . F 4 HOH 22 5023 22 HOH HOH A . F 4 HOH 23 5024 23 HOH HOH A . F 4 HOH 24 5025 24 HOH HOH A . F 4 HOH 25 5026 25 HOH HOH A . F 4 HOH 26 5027 26 HOH HOH A . F 4 HOH 27 5028 27 HOH HOH A . F 4 HOH 28 5029 28 HOH HOH A . F 4 HOH 29 5030 29 HOH HOH A . F 4 HOH 30 5031 30 HOH HOH A . F 4 HOH 31 5032 31 HOH HOH A . F 4 HOH 32 5033 32 HOH HOH A . F 4 HOH 33 5034 33 HOH HOH A . F 4 HOH 34 5035 34 HOH HOH A . F 4 HOH 35 5036 35 HOH HOH A . F 4 HOH 36 5037 36 HOH HOH A . F 4 HOH 37 5038 37 HOH HOH A . F 4 HOH 38 5039 38 HOH HOH A . F 4 HOH 39 5040 39 HOH HOH A . F 4 HOH 40 5041 40 HOH HOH A . F 4 HOH 41 5042 41 HOH HOH A . F 4 HOH 42 5043 42 HOH HOH A . F 4 HOH 43 5044 43 HOH HOH A . F 4 HOH 44 5045 44 HOH HOH A . F 4 HOH 45 5046 45 HOH HOH A . F 4 HOH 46 5047 46 HOH HOH A . F 4 HOH 47 5048 47 HOH HOH A . F 4 HOH 48 5049 48 HOH HOH A . F 4 HOH 49 5050 49 HOH HOH A . F 4 HOH 50 5051 50 HOH HOH A . F 4 HOH 51 5052 51 HOH HOH A . F 4 HOH 52 5053 52 HOH HOH A . F 4 HOH 53 5054 53 HOH HOH A . F 4 HOH 54 5055 54 HOH HOH A . F 4 HOH 55 5056 55 HOH HOH A . F 4 HOH 56 5057 56 HOH HOH A . F 4 HOH 57 5058 57 HOH HOH A . F 4 HOH 58 5059 58 HOH HOH A . F 4 HOH 59 5060 59 HOH HOH A . F 4 HOH 60 5061 60 HOH HOH A . F 4 HOH 61 5062 61 HOH HOH A . F 4 HOH 62 5063 62 HOH HOH A . F 4 HOH 63 5064 63 HOH HOH A . F 4 HOH 64 5065 64 HOH HOH A . F 4 HOH 65 5066 65 HOH HOH A . F 4 HOH 66 5067 66 HOH HOH A . F 4 HOH 67 5068 67 HOH HOH A . F 4 HOH 68 5069 68 HOH HOH A . F 4 HOH 69 5070 69 HOH HOH A . F 4 HOH 70 5071 70 HOH HOH A . F 4 HOH 71 5072 71 HOH HOH A . F 4 HOH 72 5073 72 HOH HOH A . F 4 HOH 73 5074 73 HOH HOH A . F 4 HOH 74 5075 74 HOH HOH A . F 4 HOH 75 5076 75 HOH HOH A . F 4 HOH 76 5077 76 HOH HOH A . F 4 HOH 77 5078 77 HOH HOH A . F 4 HOH 78 5079 78 HOH HOH A . F 4 HOH 79 5080 79 HOH HOH A . F 4 HOH 80 5081 80 HOH HOH A . F 4 HOH 81 5082 81 HOH HOH A . F 4 HOH 82 5083 82 HOH HOH A . F 4 HOH 83 5084 83 HOH HOH A . F 4 HOH 84 5085 84 HOH HOH A . F 4 HOH 85 5086 85 HOH HOH A . F 4 HOH 86 5087 86 HOH HOH A . F 4 HOH 87 5088 87 HOH HOH A . F 4 HOH 88 5089 88 HOH HOH A . F 4 HOH 89 5090 89 HOH HOH A . F 4 HOH 90 5091 90 HOH HOH A . F 4 HOH 91 5092 91 HOH HOH A . F 4 HOH 92 5093 92 HOH HOH A . F 4 HOH 93 5094 93 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 XNEMO 'data collection' . ? 2 FIP 'data collection' BM30A ? 3 MOSFLM 'data reduction' . ? 4 CCP4 'data scaling' '(SCALA)' ? 5 AMoRE phasing . ? 6 # _cell.entry_id 2DWR _cell.length_a 74.762 _cell.length_b 74.762 _cell.length_c 70.090 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2DWR _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? # _exptl.entry_id 2DWR _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.07 _exptl_crystal.density_percent_sol 59.97 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_details '25% PEG 4000, 20% 2-propanol, 0.1M sodium citrate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2004-07-16 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'silicon 111' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9794 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE BM30A' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline BM30A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9794 # _reflns.entry_id 2DWR _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 2.5 _reflns.d_resolution_low 64.6 _reflns.number_all ? _reflns.number_obs 8135 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 2DWR _refine.ls_number_reflns_obs 7491 _refine.ls_number_reflns_all 8114 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 64.55 _refine.ls_d_res_high 2.50 _refine.ls_percent_reflns_obs 96.54 _refine.ls_R_factor_obs 0.17973 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.17718 _refine.ls_R_factor_R_free 0.23508 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.5 _refine.ls_number_reflns_R_free 355 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.952 _refine.correlation_coeff_Fo_to_Fc_free 0.910 _refine.B_iso_mean 31.888 _refine.aniso_B[1][1] 1.36 _refine.aniso_B[2][2] 1.36 _refine.aniso_B[3][3] -2.04 _refine.aniso_B[1][2] 0.68 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'Homology model based on the structure of porcine CRW-8 VP8* that we have solved.' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.402 _refine.pdbx_overall_ESU_R_Free 0.263 _refine.overall_SU_ML 0.163 _refine.overall_SU_B 7.301 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1300 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 20 _refine_hist.number_atoms_solvent 93 _refine_hist.number_atoms_total 1413 _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 64.55 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.008 0.022 ? 1356 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.106 1.925 ? 1846 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.653 5.000 ? 161 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 33.678 24.366 ? 71 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.865 15.000 ? 209 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 12.765 15.000 ? 8 'X-RAY DIFFRACTION' ? r_chiral_restr 0.082 0.200 ? 200 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.003 0.020 ? 1057 'X-RAY DIFFRACTION' ? r_nbd_refined 0.197 0.200 ? 583 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.307 0.200 ? 909 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.115 0.200 ? 102 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.206 0.200 ? 40 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.169 0.200 ? 10 'X-RAY DIFFRACTION' ? r_mcbond_it 0.528 1.500 ? 829 'X-RAY DIFFRACTION' ? r_mcangle_it 0.949 2.000 ? 1322 'X-RAY DIFFRACTION' ? r_scbond_it 1.193 3.000 ? 608 'X-RAY DIFFRACTION' ? r_scangle_it 1.973 4.500 ? 523 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.500 _refine_ls_shell.d_res_low 2.565 _refine_ls_shell.number_reflns_R_work 533 _refine_ls_shell.R_factor_R_work 0.271 _refine_ls_shell.percent_reflns_obs 97.20 _refine_ls_shell.R_factor_R_free 0.237 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 23 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 2DWR _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2DWR _struct.title 'Crystal structure of the human Wa rotavirus VP8* carbohydrate-recognising domain' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2DWR _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' _struct_keywords.text 'beta-sandwich, VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q86202_9REOV _struct_ref.pdbx_db_accession Q86202 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MLDGPYQPTTFTPPNDYWILINSNTNGVVYESTNNSDFWTAVVAIEPHVNPVDRQYTIFGESKQFNVSNDSNKWKFLEMF RSSSQNEFYNRRTLTSDTRFVGILKYGGRVWTFHGETPRATTDSSSTANLNNISITIHSEFYIIPRSQESKCNEYINNGL ; _struct_ref.pdbx_align_begin 64 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2DWR _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 160 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q86202 _struct_ref_seq.db_align_beg 64 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 223 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 64 _struct_ref_seq.pdbx_auth_seq_align_end 223 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2DWR _struct_ref_seq_dif.mon_id LEU _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 100 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q86202 _struct_ref_seq_dif.db_mon_id PHE _struct_ref_seq_dif.pdbx_seq_db_seq_num 163 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 163 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id GLN _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 148 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id GLY _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 159 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id GLN _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 211 _struct_conf.end_auth_comp_id GLY _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 222 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 4 A . ? GLY 67 A PRO 5 A ? PRO 68 A 1 7.35 2 THR 117 A . ? THR 180 A PRO 118 A ? PRO 181 A 1 2.73 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 11 ? B ? 6 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel A 10 11 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASP A 3 ? TYR A 6 ? ASP A 66 TYR A 69 A 2 PHE A 141 ? PRO A 145 ? PHE A 204 PRO A 208 A 3 TYR A 17 ? ASN A 22 ? TYR A 80 ASN A 85 A 4 LEU A 100 ? TYR A 106 ? LEU A 163 TYR A 169 A 5 ARG A 109 ? GLU A 116 ? ARG A 172 GLU A 179 A 6 TYR A 89 ? SER A 96 ? TYR A 152 SER A 159 A 7 TRP A 74 ? ARG A 81 ? TRP A 137 ARG A 144 A 8 TRP A 39 ? ILE A 45 ? TRP A 102 ILE A 108 A 9 VAL A 28 ? THR A 33 ? VAL A 91 THR A 96 A 10 SER A 134 ? ILE A 137 ? SER A 197 ILE A 200 A 11 THR A 9 ? PHE A 11 ? THR A 72 PHE A 74 B 1 ASP A 3 ? TYR A 6 ? ASP A 66 TYR A 69 B 2 PHE A 141 ? PRO A 145 ? PHE A 204 PRO A 208 B 3 TYR A 17 ? ASN A 22 ? TYR A 80 ASN A 85 B 4 LEU A 100 ? TYR A 106 ? LEU A 163 TYR A 169 B 5 ARG A 109 ? GLU A 116 ? ARG A 172 GLU A 179 B 6 THR A 121 ? SER A 126 ? THR A 184 SER A 189 C 1 VAL A 49 ? ILE A 58 ? VAL A 112 ILE A 121 C 2 GLU A 61 ? ASN A 69 ? GLU A 124 ASN A 132 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 6 ? N TYR A 69 O PHE A 141 ? O PHE A 204 A 2 3 O ILE A 144 ? O ILE A 207 N TRP A 18 ? N TRP A 81 A 3 4 N ILE A 21 ? N ILE A 84 O VAL A 101 ? O VAL A 164 A 4 5 N LEU A 104 ? N LEU A 167 O TRP A 111 ? O TRP A 174 A 5 6 O GLY A 115 ? O GLY A 178 N THR A 95 ? N THR A 158 A 6 7 O ARG A 92 ? O ARG A 155 N GLU A 78 ? N GLU A 141 A 7 8 O MET A 79 ? O MET A 142 N ALA A 41 ? N ALA A 104 A 8 9 O VAL A 42 ? O VAL A 105 N VAL A 29 ? N VAL A 92 A 9 10 N GLU A 31 ? N GLU A 94 O THR A 136 ? O THR A 199 A 10 11 O ILE A 135 ? O ILE A 198 N PHE A 11 ? N PHE A 74 B 1 2 N TYR A 6 ? N TYR A 69 O PHE A 141 ? O PHE A 204 B 2 3 O ILE A 144 ? O ILE A 207 N TRP A 18 ? N TRP A 81 B 3 4 N ILE A 21 ? N ILE A 84 O VAL A 101 ? O VAL A 164 B 4 5 N LEU A 104 ? N LEU A 167 O TRP A 111 ? O TRP A 174 B 5 6 N HIS A 114 ? N HIS A 177 O THR A 121 ? O THR A 184 C 1 2 N TYR A 56 ? N TYR A 119 O LYS A 63 ? O LYS A 126 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GOL 4000 ? 5 'BINDING SITE FOR RESIDUE GOL A 4000' AC2 Software A GOL 4001 ? 9 'BINDING SITE FOR RESIDUE GOL A 4001' AC3 Software A IPA 5000 ? 5 'BINDING SITE FOR RESIDUE IPA A 5000' AC4 Software A IPA 5001 ? 5 'BINDING SITE FOR RESIDUE IPA A 5001' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 LEU A 104 ? LEU A 167 . ? 1_555 ? 2 AC1 5 TRP A 111 ? TRP A 174 . ? 1_555 ? 3 AC1 5 THR A 122 ? THR A 185 . ? 1_555 ? 4 AC1 5 ARG A 146 ? ARG A 209 . ? 1_555 ? 5 AC1 5 GLU A 149 ? GLU A 212 . ? 1_555 ? 6 AC2 9 GLY A 27 ? GLY A 90 . ? 3_565 ? 7 AC2 9 VAL A 28 ? VAL A 91 . ? 3_565 ? 8 AC2 9 TYR A 56 ? TYR A 119 . ? 3_565 ? 9 AC2 9 THR A 57 ? THR A 120 . ? 3_565 ? 10 AC2 9 ARG A 92 ? ARG A 155 . ? 1_555 ? 11 AC2 9 THR A 93 ? THR A 156 . ? 1_555 ? 12 AC2 9 HIS A 114 ? HIS A 177 . ? 1_555 ? 13 AC2 9 IPA E . ? IPA A 5001 . ? 1_555 ? 14 AC2 9 HOH F . ? HOH A 5054 . ? 1_555 ? 15 AC3 5 ARG A 54 ? ARG A 117 . ? 1_555 ? 16 AC3 5 GLN A 55 ? GLN A 118 . ? 1_555 ? 17 AC3 5 HIS A 114 ? HIS A 177 . ? 2_664 ? 18 AC3 5 GLY A 115 ? GLY A 178 . ? 2_664 ? 19 AC3 5 HOH F . ? HOH A 5091 . ? 2_664 ? 20 AC4 5 ASN A 90 ? ASN A 153 . ? 1_555 ? 21 AC4 5 ARG A 91 ? ARG A 154 . ? 1_555 ? 22 AC4 5 THR A 93 ? THR A 156 . ? 1_555 ? 23 AC4 5 HIS A 138 ? HIS A 201 . ? 3_565 ? 24 AC4 5 GOL C . ? GOL A 4001 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 89 ? ? -105.48 44.35 2 1 ASN A 98 ? ? 58.17 17.66 3 1 SER A 99 ? ? -129.47 -62.14 4 1 PRO A 114 ? ? -37.63 127.27 5 1 SER A 210 ? ? -36.23 -29.90 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 5069 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id F _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GOL C1 C N N 137 GOL O1 O N N 138 GOL C2 C N N 139 GOL O2 O N N 140 GOL C3 C N N 141 GOL O3 O N N 142 GOL H11 H N N 143 GOL H12 H N N 144 GOL HO1 H N N 145 GOL H2 H N N 146 GOL HO2 H N N 147 GOL H31 H N N 148 GOL H32 H N N 149 GOL HO3 H N N 150 HIS N N N N 151 HIS CA C N S 152 HIS C C N N 153 HIS O O N N 154 HIS CB C N N 155 HIS CG C Y N 156 HIS ND1 N Y N 157 HIS CD2 C Y N 158 HIS CE1 C Y N 159 HIS NE2 N Y N 160 HIS OXT O N N 161 HIS H H N N 162 HIS H2 H N N 163 HIS HA H N N 164 HIS HB2 H N N 165 HIS HB3 H N N 166 HIS HD1 H N N 167 HIS HD2 H N N 168 HIS HE1 H N N 169 HIS HE2 H N N 170 HIS HXT H N N 171 HOH O O N N 172 HOH H1 H N N 173 HOH H2 H N N 174 ILE N N N N 175 ILE CA C N S 176 ILE C C N N 177 ILE O O N N 178 ILE CB C N S 179 ILE CG1 C N N 180 ILE CG2 C N N 181 ILE CD1 C N N 182 ILE OXT O N N 183 ILE H H N N 184 ILE H2 H N N 185 ILE HA H N N 186 ILE HB H N N 187 ILE HG12 H N N 188 ILE HG13 H N N 189 ILE HG21 H N N 190 ILE HG22 H N N 191 ILE HG23 H N N 192 ILE HD11 H N N 193 ILE HD12 H N N 194 ILE HD13 H N N 195 ILE HXT H N N 196 IPA C1 C N N 197 IPA C2 C N N 198 IPA C3 C N N 199 IPA O2 O N N 200 IPA H11 H N N 201 IPA H12 H N N 202 IPA H13 H N N 203 IPA H2 H N N 204 IPA H31 H N N 205 IPA H32 H N N 206 IPA H33 H N N 207 IPA HO2 H N N 208 LEU N N N N 209 LEU CA C N S 210 LEU C C N N 211 LEU O O N N 212 LEU CB C N N 213 LEU CG C N N 214 LEU CD1 C N N 215 LEU CD2 C N N 216 LEU OXT O N N 217 LEU H H N N 218 LEU H2 H N N 219 LEU HA H N N 220 LEU HB2 H N N 221 LEU HB3 H N N 222 LEU HG H N N 223 LEU HD11 H N N 224 LEU HD12 H N N 225 LEU HD13 H N N 226 LEU HD21 H N N 227 LEU HD22 H N N 228 LEU HD23 H N N 229 LEU HXT H N N 230 LYS N N N N 231 LYS CA C N S 232 LYS C C N N 233 LYS O O N N 234 LYS CB C N N 235 LYS CG C N N 236 LYS CD C N N 237 LYS CE C N N 238 LYS NZ N N N 239 LYS OXT O N N 240 LYS H H N N 241 LYS H2 H N N 242 LYS HA H N N 243 LYS HB2 H N N 244 LYS HB3 H N N 245 LYS HG2 H N N 246 LYS HG3 H N N 247 LYS HD2 H N N 248 LYS HD3 H N N 249 LYS HE2 H N N 250 LYS HE3 H N N 251 LYS HZ1 H N N 252 LYS HZ2 H N N 253 LYS HZ3 H N N 254 LYS HXT H N N 255 MET N N N N 256 MET CA C N S 257 MET C C N N 258 MET O O N N 259 MET CB C N N 260 MET CG C N N 261 MET SD S N N 262 MET CE C N N 263 MET OXT O N N 264 MET H H N N 265 MET H2 H N N 266 MET HA H N N 267 MET HB2 H N N 268 MET HB3 H N N 269 MET HG2 H N N 270 MET HG3 H N N 271 MET HE1 H N N 272 MET HE2 H N N 273 MET HE3 H N N 274 MET HXT H N N 275 PHE N N N N 276 PHE CA C N S 277 PHE C C N N 278 PHE O O N N 279 PHE CB C N N 280 PHE CG C Y N 281 PHE CD1 C Y N 282 PHE CD2 C Y N 283 PHE CE1 C Y N 284 PHE CE2 C Y N 285 PHE CZ C Y N 286 PHE OXT O N N 287 PHE H H N N 288 PHE H2 H N N 289 PHE HA H N N 290 PHE HB2 H N N 291 PHE HB3 H N N 292 PHE HD1 H N N 293 PHE HD2 H N N 294 PHE HE1 H N N 295 PHE HE2 H N N 296 PHE HZ H N N 297 PHE HXT H N N 298 PRO N N N N 299 PRO CA C N S 300 PRO C C N N 301 PRO O O N N 302 PRO CB C N N 303 PRO CG C N N 304 PRO CD C N N 305 PRO OXT O N N 306 PRO H H N N 307 PRO HA H N N 308 PRO HB2 H N N 309 PRO HB3 H N N 310 PRO HG2 H N N 311 PRO HG3 H N N 312 PRO HD2 H N N 313 PRO HD3 H N N 314 PRO HXT H N N 315 SER N N N N 316 SER CA C N S 317 SER C C N N 318 SER O O N N 319 SER CB C N N 320 SER OG O N N 321 SER OXT O N N 322 SER H H N N 323 SER H2 H N N 324 SER HA H N N 325 SER HB2 H N N 326 SER HB3 H N N 327 SER HG H N N 328 SER HXT H N N 329 THR N N N N 330 THR CA C N S 331 THR C C N N 332 THR O O N N 333 THR CB C N R 334 THR OG1 O N N 335 THR CG2 C N N 336 THR OXT O N N 337 THR H H N N 338 THR H2 H N N 339 THR HA H N N 340 THR HB H N N 341 THR HG1 H N N 342 THR HG21 H N N 343 THR HG22 H N N 344 THR HG23 H N N 345 THR HXT H N N 346 TRP N N N N 347 TRP CA C N S 348 TRP C C N N 349 TRP O O N N 350 TRP CB C N N 351 TRP CG C Y N 352 TRP CD1 C Y N 353 TRP CD2 C Y N 354 TRP NE1 N Y N 355 TRP CE2 C Y N 356 TRP CE3 C Y N 357 TRP CZ2 C Y N 358 TRP CZ3 C Y N 359 TRP CH2 C Y N 360 TRP OXT O N N 361 TRP H H N N 362 TRP H2 H N N 363 TRP HA H N N 364 TRP HB2 H N N 365 TRP HB3 H N N 366 TRP HD1 H N N 367 TRP HE1 H N N 368 TRP HE3 H N N 369 TRP HZ2 H N N 370 TRP HZ3 H N N 371 TRP HH2 H N N 372 TRP HXT H N N 373 TYR N N N N 374 TYR CA C N S 375 TYR C C N N 376 TYR O O N N 377 TYR CB C N N 378 TYR CG C Y N 379 TYR CD1 C Y N 380 TYR CD2 C Y N 381 TYR CE1 C Y N 382 TYR CE2 C Y N 383 TYR CZ C Y N 384 TYR OH O N N 385 TYR OXT O N N 386 TYR H H N N 387 TYR H2 H N N 388 TYR HA H N N 389 TYR HB2 H N N 390 TYR HB3 H N N 391 TYR HD1 H N N 392 TYR HD2 H N N 393 TYR HE1 H N N 394 TYR HE2 H N N 395 TYR HH H N N 396 TYR HXT H N N 397 VAL N N N N 398 VAL CA C N S 399 VAL C C N N 400 VAL O O N N 401 VAL CB C N N 402 VAL CG1 C N N 403 VAL CG2 C N N 404 VAL OXT O N N 405 VAL H H N N 406 VAL H2 H N N 407 VAL HA H N N 408 VAL HB H N N 409 VAL HG11 H N N 410 VAL HG12 H N N 411 VAL HG13 H N N 412 VAL HG21 H N N 413 VAL HG22 H N N 414 VAL HG23 H N N 415 VAL HXT H N N 416 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GOL C1 O1 sing N N 129 GOL C1 C2 sing N N 130 GOL C1 H11 sing N N 131 GOL C1 H12 sing N N 132 GOL O1 HO1 sing N N 133 GOL C2 O2 sing N N 134 GOL C2 C3 sing N N 135 GOL C2 H2 sing N N 136 GOL O2 HO2 sing N N 137 GOL C3 O3 sing N N 138 GOL C3 H31 sing N N 139 GOL C3 H32 sing N N 140 GOL O3 HO3 sing N N 141 HIS N CA sing N N 142 HIS N H sing N N 143 HIS N H2 sing N N 144 HIS CA C sing N N 145 HIS CA CB sing N N 146 HIS CA HA sing N N 147 HIS C O doub N N 148 HIS C OXT sing N N 149 HIS CB CG sing N N 150 HIS CB HB2 sing N N 151 HIS CB HB3 sing N N 152 HIS CG ND1 sing Y N 153 HIS CG CD2 doub Y N 154 HIS ND1 CE1 doub Y N 155 HIS ND1 HD1 sing N N 156 HIS CD2 NE2 sing Y N 157 HIS CD2 HD2 sing N N 158 HIS CE1 NE2 sing Y N 159 HIS CE1 HE1 sing N N 160 HIS NE2 HE2 sing N N 161 HIS OXT HXT sing N N 162 HOH O H1 sing N N 163 HOH O H2 sing N N 164 ILE N CA sing N N 165 ILE N H sing N N 166 ILE N H2 sing N N 167 ILE CA C sing N N 168 ILE CA CB sing N N 169 ILE CA HA sing N N 170 ILE C O doub N N 171 ILE C OXT sing N N 172 ILE CB CG1 sing N N 173 ILE CB CG2 sing N N 174 ILE CB HB sing N N 175 ILE CG1 CD1 sing N N 176 ILE CG1 HG12 sing N N 177 ILE CG1 HG13 sing N N 178 ILE CG2 HG21 sing N N 179 ILE CG2 HG22 sing N N 180 ILE CG2 HG23 sing N N 181 ILE CD1 HD11 sing N N 182 ILE CD1 HD12 sing N N 183 ILE CD1 HD13 sing N N 184 ILE OXT HXT sing N N 185 IPA C1 C2 sing N N 186 IPA C1 H11 sing N N 187 IPA C1 H12 sing N N 188 IPA C1 H13 sing N N 189 IPA C2 C3 sing N N 190 IPA C2 O2 sing N N 191 IPA C2 H2 sing N N 192 IPA C3 H31 sing N N 193 IPA C3 H32 sing N N 194 IPA C3 H33 sing N N 195 IPA O2 HO2 sing N N 196 LEU N CA sing N N 197 LEU N H sing N N 198 LEU N H2 sing N N 199 LEU CA C sing N N 200 LEU CA CB sing N N 201 LEU CA HA sing N N 202 LEU C O doub N N 203 LEU C OXT sing N N 204 LEU CB CG sing N N 205 LEU CB HB2 sing N N 206 LEU CB HB3 sing N N 207 LEU CG CD1 sing N N 208 LEU CG CD2 sing N N 209 LEU CG HG sing N N 210 LEU CD1 HD11 sing N N 211 LEU CD1 HD12 sing N N 212 LEU CD1 HD13 sing N N 213 LEU CD2 HD21 sing N N 214 LEU CD2 HD22 sing N N 215 LEU CD2 HD23 sing N N 216 LEU OXT HXT sing N N 217 LYS N CA sing N N 218 LYS N H sing N N 219 LYS N H2 sing N N 220 LYS CA C sing N N 221 LYS CA CB sing N N 222 LYS CA HA sing N N 223 LYS C O doub N N 224 LYS C OXT sing N N 225 LYS CB CG sing N N 226 LYS CB HB2 sing N N 227 LYS CB HB3 sing N N 228 LYS CG CD sing N N 229 LYS CG HG2 sing N N 230 LYS CG HG3 sing N N 231 LYS CD CE sing N N 232 LYS CD HD2 sing N N 233 LYS CD HD3 sing N N 234 LYS CE NZ sing N N 235 LYS CE HE2 sing N N 236 LYS CE HE3 sing N N 237 LYS NZ HZ1 sing N N 238 LYS NZ HZ2 sing N N 239 LYS NZ HZ3 sing N N 240 LYS OXT HXT sing N N 241 MET N CA sing N N 242 MET N H sing N N 243 MET N H2 sing N N 244 MET CA C sing N N 245 MET CA CB sing N N 246 MET CA HA sing N N 247 MET C O doub N N 248 MET C OXT sing N N 249 MET CB CG sing N N 250 MET CB HB2 sing N N 251 MET CB HB3 sing N N 252 MET CG SD sing N N 253 MET CG HG2 sing N N 254 MET CG HG3 sing N N 255 MET SD CE sing N N 256 MET CE HE1 sing N N 257 MET CE HE2 sing N N 258 MET CE HE3 sing N N 259 MET OXT HXT sing N N 260 PHE N CA sing N N 261 PHE N H sing N N 262 PHE N H2 sing N N 263 PHE CA C sing N N 264 PHE CA CB sing N N 265 PHE CA HA sing N N 266 PHE C O doub N N 267 PHE C OXT sing N N 268 PHE CB CG sing N N 269 PHE CB HB2 sing N N 270 PHE CB HB3 sing N N 271 PHE CG CD1 doub Y N 272 PHE CG CD2 sing Y N 273 PHE CD1 CE1 sing Y N 274 PHE CD1 HD1 sing N N 275 PHE CD2 CE2 doub Y N 276 PHE CD2 HD2 sing N N 277 PHE CE1 CZ doub Y N 278 PHE CE1 HE1 sing N N 279 PHE CE2 CZ sing Y N 280 PHE CE2 HE2 sing N N 281 PHE CZ HZ sing N N 282 PHE OXT HXT sing N N 283 PRO N CA sing N N 284 PRO N CD sing N N 285 PRO N H sing N N 286 PRO CA C sing N N 287 PRO CA CB sing N N 288 PRO CA HA sing N N 289 PRO C O doub N N 290 PRO C OXT sing N N 291 PRO CB CG sing N N 292 PRO CB HB2 sing N N 293 PRO CB HB3 sing N N 294 PRO CG CD sing N N 295 PRO CG HG2 sing N N 296 PRO CG HG3 sing N N 297 PRO CD HD2 sing N N 298 PRO CD HD3 sing N N 299 PRO OXT HXT sing N N 300 SER N CA sing N N 301 SER N H sing N N 302 SER N H2 sing N N 303 SER CA C sing N N 304 SER CA CB sing N N 305 SER CA HA sing N N 306 SER C O doub N N 307 SER C OXT sing N N 308 SER CB OG sing N N 309 SER CB HB2 sing N N 310 SER CB HB3 sing N N 311 SER OG HG sing N N 312 SER OXT HXT sing N N 313 THR N CA sing N N 314 THR N H sing N N 315 THR N H2 sing N N 316 THR CA C sing N N 317 THR CA CB sing N N 318 THR CA HA sing N N 319 THR C O doub N N 320 THR C OXT sing N N 321 THR CB OG1 sing N N 322 THR CB CG2 sing N N 323 THR CB HB sing N N 324 THR OG1 HG1 sing N N 325 THR CG2 HG21 sing N N 326 THR CG2 HG22 sing N N 327 THR CG2 HG23 sing N N 328 THR OXT HXT sing N N 329 TRP N CA sing N N 330 TRP N H sing N N 331 TRP N H2 sing N N 332 TRP CA C sing N N 333 TRP CA CB sing N N 334 TRP CA HA sing N N 335 TRP C O doub N N 336 TRP C OXT sing N N 337 TRP CB CG sing N N 338 TRP CB HB2 sing N N 339 TRP CB HB3 sing N N 340 TRP CG CD1 doub Y N 341 TRP CG CD2 sing Y N 342 TRP CD1 NE1 sing Y N 343 TRP CD1 HD1 sing N N 344 TRP CD2 CE2 doub Y N 345 TRP CD2 CE3 sing Y N 346 TRP NE1 CE2 sing Y N 347 TRP NE1 HE1 sing N N 348 TRP CE2 CZ2 sing Y N 349 TRP CE3 CZ3 doub Y N 350 TRP CE3 HE3 sing N N 351 TRP CZ2 CH2 doub Y N 352 TRP CZ2 HZ2 sing N N 353 TRP CZ3 CH2 sing Y N 354 TRP CZ3 HZ3 sing N N 355 TRP CH2 HH2 sing N N 356 TRP OXT HXT sing N N 357 TYR N CA sing N N 358 TYR N H sing N N 359 TYR N H2 sing N N 360 TYR CA C sing N N 361 TYR CA CB sing N N 362 TYR CA HA sing N N 363 TYR C O doub N N 364 TYR C OXT sing N N 365 TYR CB CG sing N N 366 TYR CB HB2 sing N N 367 TYR CB HB3 sing N N 368 TYR CG CD1 doub Y N 369 TYR CG CD2 sing Y N 370 TYR CD1 CE1 sing Y N 371 TYR CD1 HD1 sing N N 372 TYR CD2 CE2 doub Y N 373 TYR CD2 HD2 sing N N 374 TYR CE1 CZ doub Y N 375 TYR CE1 HE1 sing N N 376 TYR CE2 CZ sing Y N 377 TYR CE2 HE2 sing N N 378 TYR CZ OH sing N N 379 TYR OH HH sing N N 380 TYR OXT HXT sing N N 381 VAL N CA sing N N 382 VAL N H sing N N 383 VAL N H2 sing N N 384 VAL CA C sing N N 385 VAL CA CB sing N N 386 VAL CA HA sing N N 387 VAL C O doub N N 388 VAL C OXT sing N N 389 VAL CB CG1 sing N N 390 VAL CB CG2 sing N N 391 VAL CB HB sing N N 392 VAL CG1 HG11 sing N N 393 VAL CG1 HG12 sing N N 394 VAL CG1 HG13 sing N N 395 VAL CG2 HG21 sing N N 396 VAL CG2 HG22 sing N N 397 VAL CG2 HG23 sing N N 398 VAL OXT HXT sing N N 399 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'Homology model based on the structure of porcine CRW-8 VP8* that we have solved.' # _atom_sites.entry_id 2DWR _atom_sites.fract_transf_matrix[1][1] 0.013376 _atom_sites.fract_transf_matrix[1][2] 0.007722 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015445 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014267 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_