data_2E5H # _entry.id 2E5H # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2E5H pdb_00002e5h 10.2210/pdb2e5h/pdb RCSB RCSB026249 ? ? WWPDB D_1000026249 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsg002000344.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2E5H _pdbx_database_status.recvd_initial_deposition_date 2006-12-21 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Iibuchi, H.' 1 'Tsuda, K.' 2 'Muto, Y.' 3 'Inoue, M.' 4 'Kigawa, T.' 5 'Terada, T.' 6 'Shirouzu, M.' 7 'Yokoyama, S.' 8 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 9 # _citation.id primary _citation.title 'Solution structure of RNA binding domain in Zinc finger CCHC-type and RNA binding motif 1' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Iibuchi, H.' 1 ? primary 'Tsuda, K.' 2 ? primary 'Muto, Y.' 3 ? primary 'Inoue, M.' 4 ? primary 'Kigawa, T.' 5 ? primary 'Terada, T.' 6 ? primary 'Shirouzu, M.' 7 ? primary 'Yokoyama, S.' 8 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Zinc finger CCHC-type and RNA-binding motif-containing protein 1' _entity.formula_weight 10167.770 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'RNA recognition motif' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'U11/U12 snRNP 31 kDa protein, U11/U12-31K' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGMSGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCTRAINN KQLFGRVIKASIAI ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGMSGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCTRAINN KQLFGRVIKASIAI ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsg002000344.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 MET n 1 9 SER n 1 10 GLY n 1 11 GLY n 1 12 LEU n 1 13 ALA n 1 14 PRO n 1 15 SER n 1 16 LYS n 1 17 SER n 1 18 THR n 1 19 VAL n 1 20 TYR n 1 21 VAL n 1 22 SER n 1 23 ASN n 1 24 LEU n 1 25 PRO n 1 26 PHE n 1 27 SER n 1 28 LEU n 1 29 THR n 1 30 ASN n 1 31 ASN n 1 32 ASP n 1 33 LEU n 1 34 TYR n 1 35 ARG n 1 36 ILE n 1 37 PHE n 1 38 SER n 1 39 LYS n 1 40 TYR n 1 41 GLY n 1 42 LYS n 1 43 VAL n 1 44 VAL n 1 45 LYS n 1 46 VAL n 1 47 THR n 1 48 ILE n 1 49 MET n 1 50 LYS n 1 51 ASP n 1 52 LYS n 1 53 ASP n 1 54 THR n 1 55 ARG n 1 56 LYS n 1 57 SER n 1 58 LYS n 1 59 GLY n 1 60 VAL n 1 61 ALA n 1 62 PHE n 1 63 ILE n 1 64 LEU n 1 65 PHE n 1 66 LEU n 1 67 ASP n 1 68 LYS n 1 69 ASP n 1 70 SER n 1 71 ALA n 1 72 GLN n 1 73 ASN n 1 74 CYS n 1 75 THR n 1 76 ARG n 1 77 ALA n 1 78 ILE n 1 79 ASN n 1 80 ASN n 1 81 LYS n 1 82 GLN n 1 83 LEU n 1 84 PHE n 1 85 GLY n 1 86 ARG n 1 87 VAL n 1 88 ILE n 1 89 LYS n 1 90 ALA n 1 91 SER n 1 92 ILE n 1 93 ALA n 1 94 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ZCRB1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Cell-free synthesis' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P060417-20 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ZCRB1_HUMAN _struct_ref.pdbx_db_accession Q8TBF4 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCTRAINNKQLFGRV IKASIAI ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2E5H _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 94 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8TBF4 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 87 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 87 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2E5H GLY A 1 ? UNP Q8TBF4 ? ? 'cloning artifact' -6 1 1 2E5H SER A 2 ? UNP Q8TBF4 ? ? 'cloning artifact' -5 2 1 2E5H SER A 3 ? UNP Q8TBF4 ? ? 'cloning artifact' -4 3 1 2E5H GLY A 4 ? UNP Q8TBF4 ? ? 'cloning artifact' -3 4 1 2E5H SER A 5 ? UNP Q8TBF4 ? ? 'cloning artifact' -2 5 1 2E5H SER A 6 ? UNP Q8TBF4 ? ? 'cloning artifact' -1 6 1 2E5H GLY A 7 ? UNP Q8TBF4 ? ? 'cloning artifact' 0 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_13C-separated_NOESY 1 2 1 3D_15N-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '20mM d-Tris-HCl(pH7.0), 100mM NaCl, 1mM d-DTT, 0.02% NaN3, 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2E5H _pdbx_nmr_refine.method 'torsion angle dynamics, restrainted molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2E5H _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations,structures with the lowest energy,target function' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2E5H _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20060702 Delaglio,F 2 'data analysis' NMRView 5.0.4 Johnson,B.A 3 'data analysis' KUJIRA 0.9820 Kobayashi,N 4 'structure solution' CYANA 2.0.17 Guntert,P 5 refinement CYANA 2.0.17 Guntert,P 6 # _exptl.entry_id 2E5H _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2E5H _struct.title 'Solution structure of RNA binding domain in Zinc finger CCHC-type and RNA binding motif 1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2E5H _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text ;RRM domain, RBD, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, UNKNOWN FUNCTION ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 29 ? PHE A 37 ? THR A 22 PHE A 30 1 ? 9 HELX_P HELX_P2 2 ASP A 67 ? ILE A 78 ? ASP A 60 ILE A 71 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 43 ? ILE A 48 ? VAL A 36 ILE A 41 A 2 ALA A 61 ? PHE A 65 ? ALA A 54 PHE A 58 A 3 VAL A 19 ? SER A 22 ? VAL A 12 SER A 15 A 4 ARG A 86 ? ILE A 92 ? ARG A 79 ILE A 85 A 5 LYS A 81 ? LEU A 83 ? LYS A 74 LEU A 76 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 47 ? N THR A 40 O PHE A 62 ? O PHE A 55 A 2 3 O ALA A 61 ? O ALA A 54 N VAL A 21 ? N VAL A 14 A 3 4 N TYR A 20 ? N TYR A 13 O SER A 91 ? O SER A 84 A 4 5 O ARG A 86 ? O ARG A 79 N LEU A 83 ? N LEU A 76 # _database_PDB_matrix.entry_id 2E5H _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2E5H _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -6 -6 GLY GLY A . n A 1 2 SER 2 -5 -5 SER SER A . n A 1 3 SER 3 -4 -4 SER SER A . n A 1 4 GLY 4 -3 -3 GLY GLY A . n A 1 5 SER 5 -2 -2 SER SER A . n A 1 6 SER 6 -1 -1 SER SER A . n A 1 7 GLY 7 0 0 GLY GLY A . n A 1 8 MET 8 1 1 MET MET A . n A 1 9 SER 9 2 2 SER SER A . n A 1 10 GLY 10 3 3 GLY GLY A . n A 1 11 GLY 11 4 4 GLY GLY A . n A 1 12 LEU 12 5 5 LEU LEU A . n A 1 13 ALA 13 6 6 ALA ALA A . n A 1 14 PRO 14 7 7 PRO PRO A . n A 1 15 SER 15 8 8 SER SER A . n A 1 16 LYS 16 9 9 LYS LYS A . n A 1 17 SER 17 10 10 SER SER A . n A 1 18 THR 18 11 11 THR THR A . n A 1 19 VAL 19 12 12 VAL VAL A . n A 1 20 TYR 20 13 13 TYR TYR A . n A 1 21 VAL 21 14 14 VAL VAL A . n A 1 22 SER 22 15 15 SER SER A . n A 1 23 ASN 23 16 16 ASN ASN A . n A 1 24 LEU 24 17 17 LEU LEU A . n A 1 25 PRO 25 18 18 PRO PRO A . n A 1 26 PHE 26 19 19 PHE PHE A . n A 1 27 SER 27 20 20 SER SER A . n A 1 28 LEU 28 21 21 LEU LEU A . n A 1 29 THR 29 22 22 THR THR A . n A 1 30 ASN 30 23 23 ASN ASN A . n A 1 31 ASN 31 24 24 ASN ASN A . n A 1 32 ASP 32 25 25 ASP ASP A . n A 1 33 LEU 33 26 26 LEU LEU A . n A 1 34 TYR 34 27 27 TYR TYR A . n A 1 35 ARG 35 28 28 ARG ARG A . n A 1 36 ILE 36 29 29 ILE ILE A . n A 1 37 PHE 37 30 30 PHE PHE A . n A 1 38 SER 38 31 31 SER SER A . n A 1 39 LYS 39 32 32 LYS LYS A . n A 1 40 TYR 40 33 33 TYR TYR A . n A 1 41 GLY 41 34 34 GLY GLY A . n A 1 42 LYS 42 35 35 LYS LYS A . n A 1 43 VAL 43 36 36 VAL VAL A . n A 1 44 VAL 44 37 37 VAL VAL A . n A 1 45 LYS 45 38 38 LYS LYS A . n A 1 46 VAL 46 39 39 VAL VAL A . n A 1 47 THR 47 40 40 THR THR A . n A 1 48 ILE 48 41 41 ILE ILE A . n A 1 49 MET 49 42 42 MET MET A . n A 1 50 LYS 50 43 43 LYS LYS A . n A 1 51 ASP 51 44 44 ASP ASP A . n A 1 52 LYS 52 45 45 LYS LYS A . n A 1 53 ASP 53 46 46 ASP ASP A . n A 1 54 THR 54 47 47 THR THR A . n A 1 55 ARG 55 48 48 ARG ARG A . n A 1 56 LYS 56 49 49 LYS LYS A . n A 1 57 SER 57 50 50 SER SER A . n A 1 58 LYS 58 51 51 LYS LYS A . n A 1 59 GLY 59 52 52 GLY GLY A . n A 1 60 VAL 60 53 53 VAL VAL A . n A 1 61 ALA 61 54 54 ALA ALA A . n A 1 62 PHE 62 55 55 PHE PHE A . n A 1 63 ILE 63 56 56 ILE ILE A . n A 1 64 LEU 64 57 57 LEU LEU A . n A 1 65 PHE 65 58 58 PHE PHE A . n A 1 66 LEU 66 59 59 LEU LEU A . n A 1 67 ASP 67 60 60 ASP ASP A . n A 1 68 LYS 68 61 61 LYS LYS A . n A 1 69 ASP 69 62 62 ASP ASP A . n A 1 70 SER 70 63 63 SER SER A . n A 1 71 ALA 71 64 64 ALA ALA A . n A 1 72 GLN 72 65 65 GLN GLN A . n A 1 73 ASN 73 66 66 ASN ASN A . n A 1 74 CYS 74 67 67 CYS CYS A . n A 1 75 THR 75 68 68 THR THR A . n A 1 76 ARG 76 69 69 ARG ARG A . n A 1 77 ALA 77 70 70 ALA ALA A . n A 1 78 ILE 78 71 71 ILE ILE A . n A 1 79 ASN 79 72 72 ASN ASN A . n A 1 80 ASN 80 73 73 ASN ASN A . n A 1 81 LYS 81 74 74 LYS LYS A . n A 1 82 GLN 82 75 75 GLN GLN A . n A 1 83 LEU 83 76 76 LEU LEU A . n A 1 84 PHE 84 77 77 PHE PHE A . n A 1 85 GLY 85 78 78 GLY GLY A . n A 1 86 ARG 86 79 79 ARG ARG A . n A 1 87 VAL 87 80 80 VAL VAL A . n A 1 88 ILE 88 81 81 ILE ILE A . n A 1 89 LYS 89 82 82 LYS LYS A . n A 1 90 ALA 90 83 83 ALA ALA A . n A 1 91 SER 91 84 84 SER SER A . n A 1 92 ILE 92 85 85 ILE ILE A . n A 1 93 ALA 93 86 86 ALA ALA A . n A 1 94 ILE 94 87 87 ILE ILE A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-06-26 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A -2 ? ? 34.47 41.55 2 1 LEU A 5 ? ? -46.02 159.38 3 1 PRO A 7 ? ? -69.76 4.21 4 1 SER A 8 ? ? -33.80 148.62 5 1 THR A 11 ? ? -34.63 143.35 6 1 PRO A 18 ? ? -69.76 84.43 7 1 ASP A 46 ? ? -74.63 -73.86 8 1 VAL A 53 ? ? -52.84 102.49 9 1 PHE A 77 ? ? 41.19 27.93 10 1 ALA A 86 ? ? -67.45 91.04 11 2 SER A -4 ? ? -64.09 81.85 12 2 SER A -2 ? ? -128.65 -51.71 13 2 SER A 2 ? ? -93.82 42.09 14 2 ALA A 6 ? ? 74.47 49.76 15 2 TYR A 13 ? ? -68.71 98.81 16 2 PRO A 18 ? ? -69.71 80.00 17 2 PHE A 19 ? ? -38.73 -29.25 18 2 LEU A 21 ? ? -68.91 -177.53 19 2 TYR A 33 ? ? -102.01 -60.21 20 2 ASP A 44 ? ? -52.73 176.46 21 2 LYS A 45 ? ? -98.20 -61.44 22 2 ASP A 46 ? ? -66.01 -71.51 23 2 ARG A 79 ? ? -174.05 113.15 24 3 SER A -4 ? ? -170.18 135.31 25 3 PRO A 18 ? ? -69.71 85.71 26 3 ASP A 44 ? ? -58.02 178.07 27 3 ARG A 79 ? ? -165.81 109.54 28 4 SER A -1 ? ? -173.91 106.25 29 4 LEU A 5 ? ? -115.80 50.30 30 4 PRO A 18 ? ? -69.73 87.12 31 4 PHE A 77 ? ? 42.78 25.90 32 4 ARG A 79 ? ? -167.08 110.02 33 4 VAL A 80 ? ? -44.62 104.30 34 5 SER A -5 ? ? -162.13 110.13 35 5 ALA A 6 ? ? -116.80 54.82 36 5 THR A 11 ? ? -36.27 132.88 37 5 PRO A 18 ? ? -69.78 79.99 38 5 ASP A 44 ? ? -56.70 175.83 39 5 ARG A 79 ? ? -170.02 108.07 40 5 VAL A 80 ? ? -48.47 106.88 41 6 SER A -5 ? ? -39.60 130.72 42 6 SER A -2 ? ? -49.15 99.08 43 6 PRO A 18 ? ? -69.80 86.42 44 6 ASP A 44 ? ? -49.62 178.04 45 6 ASP A 46 ? ? -99.55 -69.90 46 6 VAL A 53 ? ? -51.55 109.36 47 6 ARG A 79 ? ? -164.92 110.17 48 6 VAL A 80 ? ? -48.26 108.52 49 7 PRO A 7 ? ? -69.75 3.55 50 7 SER A 8 ? ? -34.04 150.47 51 7 PRO A 18 ? ? -69.79 84.36 52 7 ASP A 44 ? ? -50.56 177.27 53 7 LYS A 45 ? ? -100.78 -65.06 54 7 VAL A 53 ? ? -55.30 106.28 55 7 PHE A 77 ? ? 40.78 29.77 56 7 ARG A 79 ? ? -163.20 106.27 57 7 VAL A 80 ? ? -43.19 108.53 58 8 ALA A 6 ? ? 31.82 53.23 59 8 THR A 11 ? ? -37.53 137.17 60 8 PRO A 18 ? ? -69.75 80.62 61 8 PHE A 19 ? ? -39.20 -28.49 62 8 ARG A 48 ? ? 70.57 41.88 63 8 VAL A 53 ? ? -57.35 108.57 64 8 ALA A 64 ? ? -53.10 -70.07 65 8 ARG A 79 ? ? -173.85 113.03 66 8 VAL A 80 ? ? -54.55 96.05 67 9 SER A -2 ? ? -38.85 128.93 68 9 PRO A 18 ? ? -69.78 83.08 69 9 ASP A 46 ? ? -103.81 -64.02 70 9 VAL A 53 ? ? -48.11 97.57 71 9 ARG A 79 ? ? -162.45 111.18 72 10 SER A -2 ? ? -42.79 107.04 73 10 PRO A 7 ? ? -69.82 -179.68 74 10 THR A 11 ? ? -38.93 140.75 75 10 PRO A 18 ? ? -69.76 81.59 76 10 PHE A 19 ? ? -38.22 -31.59 77 10 SER A 20 ? ? -38.91 -39.89 78 10 ASP A 46 ? ? -74.37 -72.57 79 10 ARG A 79 ? ? -175.03 118.05 80 10 VAL A 80 ? ? -59.39 96.56 81 11 SER A -5 ? ? -84.00 42.05 82 11 PRO A 7 ? ? -69.75 4.91 83 11 PRO A 18 ? ? -69.78 80.07 84 11 PHE A 19 ? ? -40.00 -27.86 85 11 LYS A 32 ? ? -47.65 -19.72 86 11 ASP A 44 ? ? -60.68 -178.50 87 11 VAL A 53 ? ? -52.72 109.36 88 11 ARG A 79 ? ? -174.12 117.42 89 11 VAL A 80 ? ? -54.73 105.73 90 12 SER A -5 ? ? -165.34 116.28 91 12 PRO A 18 ? ? -69.72 89.07 92 12 ASP A 46 ? ? -77.81 -72.53 93 12 VAL A 53 ? ? -59.74 109.00 94 12 PHE A 77 ? ? 46.49 26.76 95 12 ARG A 79 ? ? -171.81 120.75 96 12 VAL A 80 ? ? -56.75 102.38 97 13 MET A 1 ? ? 35.33 43.91 98 13 SER A 2 ? ? -105.03 77.52 99 13 LEU A 5 ? ? -101.45 -64.37 100 13 PRO A 18 ? ? -69.78 87.12 101 13 ASP A 46 ? ? -89.45 -70.48 102 13 ARG A 79 ? ? -161.37 116.23 103 13 VAL A 80 ? ? -54.70 108.88 104 13 ILE A 85 ? ? -38.08 148.35 105 14 SER A -1 ? ? -97.16 42.17 106 14 ALA A 6 ? ? 72.38 53.29 107 14 PRO A 7 ? ? -69.78 83.75 108 14 PRO A 18 ? ? -69.70 80.06 109 14 LEU A 21 ? ? -64.36 -174.77 110 14 TYR A 33 ? ? -99.89 -61.10 111 14 ARG A 48 ? ? 72.69 49.90 112 14 ARG A 79 ? ? -173.76 115.07 113 14 VAL A 80 ? ? -57.34 96.72 114 14 ILE A 85 ? ? -58.86 106.89 115 14 ALA A 86 ? ? -65.40 97.85 116 15 ALA A 6 ? ? -39.13 132.12 117 15 THR A 11 ? ? -42.59 157.19 118 15 PRO A 18 ? ? -69.68 80.82 119 15 VAL A 53 ? ? -53.68 103.51 120 15 PHE A 77 ? ? 47.28 25.08 121 15 ARG A 79 ? ? -165.06 109.83 122 16 SER A -2 ? ? -92.40 43.20 123 16 THR A 11 ? ? -45.89 155.50 124 16 PRO A 18 ? ? -69.77 83.98 125 16 ASP A 46 ? ? -117.57 -74.01 126 16 SER A 50 ? ? -38.08 -38.95 127 16 ASN A 72 ? ? -36.23 131.84 128 16 ARG A 79 ? ? -168.79 105.47 129 16 VAL A 80 ? ? -44.56 108.81 130 17 PRO A 18 ? ? -69.77 80.13 131 17 PHE A 19 ? ? -39.79 -31.04 132 17 LEU A 21 ? ? -69.51 -176.90 133 17 ASP A 25 ? ? -56.21 -70.12 134 17 TYR A 33 ? ? -100.02 -60.98 135 17 ARG A 79 ? ? -175.05 117.78 136 17 VAL A 80 ? ? -59.02 101.60 137 18 SER A -4 ? ? -44.77 101.61 138 18 ALA A 6 ? ? 73.81 54.11 139 18 PRO A 7 ? ? -69.74 2.10 140 18 SER A 8 ? ? -35.55 135.91 141 18 PRO A 18 ? ? -69.72 79.86 142 18 PHE A 19 ? ? -36.99 -32.74 143 18 LEU A 21 ? ? -65.10 -174.82 144 18 TYR A 33 ? ? -101.12 -61.18 145 18 ARG A 79 ? ? -173.99 110.15 146 18 ILE A 85 ? ? -58.83 108.40 147 19 ALA A 6 ? ? -59.33 109.84 148 19 PRO A 18 ? ? -69.77 84.40 149 19 ASP A 44 ? ? -58.06 -177.41 150 19 ASP A 46 ? ? -104.26 -74.58 151 19 PHE A 77 ? ? 49.71 25.85 152 19 ARG A 79 ? ? -166.84 107.43 153 19 VAL A 80 ? ? -46.90 108.22 154 20 SER A -2 ? ? -56.82 177.83 155 20 PRO A 18 ? ? -69.78 80.78 156 20 PHE A 19 ? ? -39.29 -31.02 157 20 SER A 20 ? ? -38.81 -38.39 158 20 LEU A 21 ? ? -68.29 -175.70 159 20 TYR A 33 ? ? -99.98 -62.85 160 20 LYS A 43 ? ? -163.11 114.76 161 20 ASP A 44 ? ? -53.01 174.30 162 20 LYS A 45 ? ? -95.61 -61.28 163 20 ARG A 79 ? ? -173.86 113.81 164 20 VAL A 80 ? ? -53.86 109.59 #