data_2E72 # _entry.id 2E72 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2E72 pdb_00002e72 10.2210/pdb2e72/pdb RCSB RCSB026306 ? ? WWPDB D_1000026306 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsk002000449.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2E72 _pdbx_database_status.recvd_initial_deposition_date 2007-01-05 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Tanabe, W.' 1 ? 'Suzuki, S.' 2 ? 'Muto, Y.' 3 ? 'Inoue, M.' 4 ? 'Kigawa, T.' 5 ? 'Terada, T.' 6 ? 'Shirouzu, M.' 7 ? 'Yokoyama, S.' 8 ? 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 9 ? # _citation.id primary _citation.title 'Solution structure of the zinc finger domain of human KIAA0461' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tanabe, W.' 1 ? primary 'Suzuki, S.' 2 ? primary 'Muto, Y.' 3 ? primary 'Inoue, M.' 4 ? primary 'Kigawa, T.' 5 ? primary 'Terada, T.' 6 ? primary 'Shirouzu, M.' 7 ? primary 'Yokoyama, S.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Pogo transposable element with ZNF domain' 5191.801 1 ? ? 'zinc finger domain' ? 2 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GSSGSSGQDGGRKICPRCNAQFRVTEALRGHMCYCCPEMVEYQSGPSSG _entity_poly.pdbx_seq_one_letter_code_can GSSGSSGQDGGRKICPRCNAQFRVTEALRGHMCYCCPEMVEYQSGPSSG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsk002000449.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 GLN n 1 9 ASP n 1 10 GLY n 1 11 GLY n 1 12 ARG n 1 13 LYS n 1 14 ILE n 1 15 CYS n 1 16 PRO n 1 17 ARG n 1 18 CYS n 1 19 ASN n 1 20 ALA n 1 21 GLN n 1 22 PHE n 1 23 ARG n 1 24 VAL n 1 25 THR n 1 26 GLU n 1 27 ALA n 1 28 LEU n 1 29 ARG n 1 30 GLY n 1 31 HIS n 1 32 MET n 1 33 CYS n 1 34 TYR n 1 35 CYS n 1 36 CYS n 1 37 PRO n 1 38 GLU n 1 39 MET n 1 40 VAL n 1 41 GLU n 1 42 TYR n 1 43 GLN n 1 44 SER n 1 45 GLY n 1 46 PRO n 1 47 SER n 1 48 SER n 1 49 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'POGZ, KIAA0461' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P050912-02 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code POGZ_HUMAN _struct_ref.pdbx_db_accession Q7Z3K3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code QDGGRKICPRCNAQFRVTEALRGHMCYCCPEMVEYQ _struct_ref.pdbx_align_begin 370 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2E72 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 43 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q7Z3K3 _struct_ref_seq.db_align_beg 370 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 405 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 370 _struct_ref_seq.pdbx_auth_seq_align_end 405 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2E72 GLY A 1 ? UNP Q7Z3K3 ? ? 'cloning artifact' 363 1 1 2E72 SER A 2 ? UNP Q7Z3K3 ? ? 'cloning artifact' 364 2 1 2E72 SER A 3 ? UNP Q7Z3K3 ? ? 'cloning artifact' 365 3 1 2E72 GLY A 4 ? UNP Q7Z3K3 ? ? 'cloning artifact' 366 4 1 2E72 SER A 5 ? UNP Q7Z3K3 ? ? 'cloning artifact' 367 5 1 2E72 SER A 6 ? UNP Q7Z3K3 ? ? 'cloning artifact' 368 6 1 2E72 GLY A 7 ? UNP Q7Z3K3 ? ? 'cloning artifact' 369 7 1 2E72 SER A 44 ? UNP Q7Z3K3 ? ? 'cloning artifact' 406 8 1 2E72 GLY A 45 ? UNP Q7Z3K3 ? ? 'cloning artifact' 407 9 1 2E72 PRO A 46 ? UNP Q7Z3K3 ? ? 'cloning artifact' 408 10 1 2E72 SER A 47 ? UNP Q7Z3K3 ? ? 'cloning artifact' 409 11 1 2E72 SER A 48 ? UNP Q7Z3K3 ? ? 'cloning artifact' 410 12 1 2E72 GLY A 49 ? UNP Q7Z3K3 ? ? 'cloning artifact' 411 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.31mM 13C-15N PROTEIN; 20mM d-Tris-HCl(pH7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 10% D2O; 0.05mM ZnCl2+1mM IDA, 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 700 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2E72 _pdbx_nmr_refine.method 'torsion angle dyanamics, simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2E72 _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations, structures with the lowest energy, target function' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2E72 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20031121 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' NMRView 0.9742 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 2E72 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2E72 _struct.title 'Solution structure of the zinc finger domain of human KIAA0461' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2E72 _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text ;zinc finger domain, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, UNKNOWN FUNCTION ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id VAL _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 24 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id CYS _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 36 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id VAL _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 386 _struct_conf.end_auth_comp_id CYS _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 398 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? B ZN . ZN ? ? ? 1_555 A CYS 15 SG ? ? A ZN 201 A CYS 377 1_555 ? ? ? ? ? ? ? 2.337 ? ? metalc2 metalc ? ? B ZN . ZN ? ? ? 1_555 A CYS 18 SG ? ? A ZN 201 A CYS 380 1_555 ? ? ? ? ? ? ? 2.329 ? ? metalc3 metalc ? ? B ZN . ZN ? ? ? 1_555 A HIS 31 NE2 ? ? A ZN 201 A HIS 393 1_555 ? ? ? ? ? ? ? 2.369 ? ? metalc4 metalc ? ? B ZN . ZN ? ? ? 1_555 A CYS 35 SG ? ? A ZN 201 A CYS 397 1_555 ? ? ? ? ? ? ? 2.331 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 45 A . ? GLY 407 A PRO 46 A ? PRO 408 A 1 0.10 2 GLY 45 A . ? GLY 407 A PRO 46 A ? PRO 408 A 2 0.08 3 GLY 45 A . ? GLY 407 A PRO 46 A ? PRO 408 A 3 0.05 4 GLY 45 A . ? GLY 407 A PRO 46 A ? PRO 408 A 4 0.09 5 GLY 45 A . ? GLY 407 A PRO 46 A ? PRO 408 A 5 0.05 6 GLY 45 A . ? GLY 407 A PRO 46 A ? PRO 408 A 6 0.01 7 GLY 45 A . ? GLY 407 A PRO 46 A ? PRO 408 A 7 0.00 8 GLY 45 A . ? GLY 407 A PRO 46 A ? PRO 408 A 8 0.13 9 GLY 45 A . ? GLY 407 A PRO 46 A ? PRO 408 A 9 -0.01 10 GLY 45 A . ? GLY 407 A PRO 46 A ? PRO 408 A 10 0.10 11 GLY 45 A . ? GLY 407 A PRO 46 A ? PRO 408 A 11 0.11 12 GLY 45 A . ? GLY 407 A PRO 46 A ? PRO 408 A 12 0.02 13 GLY 45 A . ? GLY 407 A PRO 46 A ? PRO 408 A 13 0.11 14 GLY 45 A . ? GLY 407 A PRO 46 A ? PRO 408 A 14 0.03 15 GLY 45 A . ? GLY 407 A PRO 46 A ? PRO 408 A 15 0.00 16 GLY 45 A . ? GLY 407 A PRO 46 A ? PRO 408 A 16 0.05 17 GLY 45 A . ? GLY 407 A PRO 46 A ? PRO 408 A 17 0.02 18 GLY 45 A . ? GLY 407 A PRO 46 A ? PRO 408 A 18 0.05 19 GLY 45 A . ? GLY 407 A PRO 46 A ? PRO 408 A 19 0.07 20 GLY 45 A . ? GLY 407 A PRO 46 A ? PRO 408 A 20 0.11 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id ZN _struct_site.pdbx_auth_seq_id 201 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'BINDING SITE FOR RESIDUE ZN A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 15 ? CYS A 377 . ? 1_555 ? 2 AC1 4 CYS A 18 ? CYS A 380 . ? 1_555 ? 3 AC1 4 HIS A 31 ? HIS A 393 . ? 1_555 ? 4 AC1 4 CYS A 35 ? CYS A 397 . ? 1_555 ? # _database_PDB_matrix.entry_id 2E72 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2E72 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 363 363 GLY GLY A . n A 1 2 SER 2 364 364 SER SER A . n A 1 3 SER 3 365 365 SER SER A . n A 1 4 GLY 4 366 366 GLY GLY A . n A 1 5 SER 5 367 367 SER SER A . n A 1 6 SER 6 368 368 SER SER A . n A 1 7 GLY 7 369 369 GLY GLY A . n A 1 8 GLN 8 370 370 GLN GLN A . n A 1 9 ASP 9 371 371 ASP ASP A . n A 1 10 GLY 10 372 372 GLY GLY A . n A 1 11 GLY 11 373 373 GLY GLY A . n A 1 12 ARG 12 374 374 ARG ARG A . n A 1 13 LYS 13 375 375 LYS LYS A . n A 1 14 ILE 14 376 376 ILE ILE A . n A 1 15 CYS 15 377 377 CYS CYS A . n A 1 16 PRO 16 378 378 PRO PRO A . n A 1 17 ARG 17 379 379 ARG ARG A . n A 1 18 CYS 18 380 380 CYS CYS A . n A 1 19 ASN 19 381 381 ASN ASN A . n A 1 20 ALA 20 382 382 ALA ALA A . n A 1 21 GLN 21 383 383 GLN GLN A . n A 1 22 PHE 22 384 384 PHE PHE A . n A 1 23 ARG 23 385 385 ARG ARG A . n A 1 24 VAL 24 386 386 VAL VAL A . n A 1 25 THR 25 387 387 THR THR A . n A 1 26 GLU 26 388 388 GLU GLU A . n A 1 27 ALA 27 389 389 ALA ALA A . n A 1 28 LEU 28 390 390 LEU LEU A . n A 1 29 ARG 29 391 391 ARG ARG A . n A 1 30 GLY 30 392 392 GLY GLY A . n A 1 31 HIS 31 393 393 HIS HIS A . n A 1 32 MET 32 394 394 MET MET A . n A 1 33 CYS 33 395 395 CYS CYS A . n A 1 34 TYR 34 396 396 TYR TYR A . n A 1 35 CYS 35 397 397 CYS CYS A . n A 1 36 CYS 36 398 398 CYS CYS A . n A 1 37 PRO 37 399 399 PRO PRO A . n A 1 38 GLU 38 400 400 GLU GLU A . n A 1 39 MET 39 401 401 MET MET A . n A 1 40 VAL 40 402 402 VAL VAL A . n A 1 41 GLU 41 403 403 GLU GLU A . n A 1 42 TYR 42 404 404 TYR TYR A . n A 1 43 GLN 43 405 405 GLN GLN A . n A 1 44 SER 44 406 406 SER SER A . n A 1 45 GLY 45 407 407 GLY GLY A . n A 1 46 PRO 46 408 408 PRO PRO A . n A 1 47 SER 47 409 409 SER SER A . n A 1 48 SER 48 410 410 SER SER A . n A 1 49 GLY 49 411 411 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id ZN _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 201 _pdbx_nonpoly_scheme.auth_seq_num 201 _pdbx_nonpoly_scheme.pdb_mon_id ZN _pdbx_nonpoly_scheme.auth_mon_id ZN _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 15 ? A CYS 377 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 SG ? A CYS 18 ? A CYS 380 ? 1_555 103.6 ? 2 SG ? A CYS 15 ? A CYS 377 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 NE2 ? A HIS 31 ? A HIS 393 ? 1_555 111.2 ? 3 SG ? A CYS 18 ? A CYS 380 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 NE2 ? A HIS 31 ? A HIS 393 ? 1_555 85.8 ? 4 SG ? A CYS 15 ? A CYS 377 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 SG ? A CYS 35 ? A CYS 397 ? 1_555 117.9 ? 5 SG ? A CYS 18 ? A CYS 380 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 SG ? A CYS 35 ? A CYS 397 ? 1_555 118.3 ? 6 NE2 ? A HIS 31 ? A HIS 393 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 SG ? A CYS 35 ? A CYS 397 ? 1_555 115.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-07-10 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' 6 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 7 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 8 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 367 ? ? -51.61 105.65 2 1 SER A 368 ? ? -62.66 88.40 3 1 ARG A 374 ? ? -36.66 102.46 4 1 PRO A 378 ? ? -69.75 3.13 5 1 ARG A 379 ? ? -106.11 -75.10 6 1 VAL A 402 ? ? -38.96 101.11 7 2 PRO A 378 ? ? -69.82 2.80 8 2 ARG A 379 ? ? -106.42 -65.53 9 2 MET A 401 ? ? -89.63 46.08 10 3 SER A 367 ? ? -45.49 161.13 11 3 GLN A 370 ? ? -47.55 166.64 12 3 ASP A 371 ? ? -130.81 -51.89 13 3 PRO A 378 ? ? -69.77 3.70 14 3 ASN A 381 ? ? 40.97 25.48 15 3 PRO A 399 ? ? -69.72 3.11 16 3 SER A 406 ? ? -48.66 154.61 17 4 SER A 368 ? ? -83.71 41.93 18 4 PRO A 378 ? ? -69.69 3.14 19 4 ARG A 379 ? ? -104.97 -69.17 20 4 VAL A 402 ? ? -40.92 106.50 21 5 SER A 364 ? ? -35.72 147.79 22 5 PRO A 378 ? ? -69.72 4.07 23 5 ASN A 381 ? ? 37.70 28.47 24 5 PRO A 399 ? ? -69.82 0.62 25 5 MET A 401 ? ? -82.91 43.84 26 6 PRO A 378 ? ? -69.80 3.73 27 6 MET A 401 ? ? -97.03 50.69 28 7 PRO A 378 ? ? -69.78 4.75 29 7 ASN A 381 ? ? 38.44 27.20 30 7 MET A 401 ? ? -85.54 47.65 31 7 VAL A 402 ? ? -133.87 -52.13 32 8 PRO A 378 ? ? -69.78 5.07 33 8 ASN A 381 ? ? 34.13 33.57 34 8 PRO A 399 ? ? -69.79 0.96 35 8 MET A 401 ? ? -119.06 76.39 36 8 GLU A 403 ? ? -42.53 104.22 37 9 CYS A 377 ? ? -35.13 119.61 38 9 PRO A 378 ? ? -69.78 5.84 39 9 PRO A 399 ? ? -69.82 0.44 40 9 MET A 401 ? ? -118.35 70.41 41 10 PRO A 378 ? ? -69.81 2.25 42 10 ARG A 379 ? ? -106.21 -67.34 43 10 ASN A 381 ? ? 70.07 47.62 44 10 VAL A 402 ? ? -34.78 118.65 45 10 GLU A 403 ? ? -48.09 172.92 46 10 SER A 410 ? ? -92.57 42.06 47 11 PRO A 378 ? ? -69.82 5.16 48 11 ASN A 381 ? ? 46.87 25.68 49 11 HIS A 393 ? ? -38.39 -39.20 50 11 VAL A 402 ? ? -49.22 108.56 51 12 PRO A 378 ? ? -69.82 2.72 52 12 ARG A 379 ? ? -103.46 -64.02 53 12 ARG A 385 ? ? -120.92 -55.57 54 12 PRO A 399 ? ? -69.74 1.82 55 12 MET A 401 ? ? -79.67 44.17 56 13 PRO A 378 ? ? -69.84 4.38 57 13 ASN A 381 ? ? 41.39 24.95 58 13 GLU A 403 ? ? -36.77 114.30 59 13 SER A 409 ? ? -69.34 85.85 60 13 SER A 410 ? ? -105.64 41.92 61 14 PRO A 378 ? ? -69.80 5.41 62 14 ASN A 381 ? ? 31.65 51.11 63 14 CYS A 397 ? ? -62.81 -75.22 64 14 CYS A 398 ? ? -110.69 79.03 65 15 PRO A 378 ? ? -69.67 2.81 66 15 ARG A 379 ? ? -107.39 -68.82 67 15 ASN A 381 ? ? 71.68 49.05 68 15 ARG A 385 ? ? -98.35 -62.11 69 16 SER A 368 ? ? -47.05 109.25 70 16 ARG A 374 ? ? -60.32 96.79 71 16 PRO A 378 ? ? -69.74 5.49 72 16 ASN A 381 ? ? 32.52 37.87 73 16 VAL A 402 ? ? -39.08 121.66 74 17 PRO A 378 ? ? -69.76 4.47 75 17 ARG A 379 ? ? -105.91 -65.09 76 17 MET A 401 ? ? -89.44 48.70 77 17 GLU A 403 ? ? -50.51 101.95 78 18 SER A 364 ? ? -80.96 43.06 79 18 CYS A 377 ? ? -34.19 116.55 80 18 PRO A 378 ? ? -69.74 5.42 81 18 ARG A 379 ? ? -100.19 -62.30 82 18 HIS A 393 ? ? -35.25 -32.31 83 18 VAL A 402 ? ? -37.06 127.48 84 19 SER A 364 ? ? -68.41 87.01 85 19 PRO A 378 ? ? -69.77 6.14 86 19 GLU A 403 ? ? -57.08 104.92 87 19 SER A 409 ? ? -80.52 -71.00 88 20 ASP A 371 ? ? -53.38 103.07 89 20 PRO A 378 ? ? -69.78 5.51 90 20 ASN A 381 ? ? 34.86 34.11 91 20 GLU A 388 ? ? -34.98 -34.83 92 20 SER A 409 ? ? -91.89 -60.73 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'ZINC ION' _pdbx_entity_nonpoly.comp_id ZN #