HEADER CELL CYCLE 30-JAN-07 2EA5 TITLE SOLUTION STRUCTURE OF THE RING DOMAIN OF THE HUMAN CELL TITLE 2 GROWTH REGULATOR WITH RING FINGER DOMAIN 1 PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELL GROWTH REGULATOR WITH RING FINGER DOMAIN COMPND 3 PROTEIN 1; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: RING DOMAIN; COMPND 6 SYNONYM: CELL GROWTH REGULATORY GENE 19 PROTEIN, RING COMPND 7 FINGER PROTEIN 197; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CGRRF1, CGR19, RNF197; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P051017-24; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS CELL GROWTH REGULATOR WITH RING FINGER DOMAIN 1, CGRRF1, KEYWDS 2 RING DOMAIN, ZINC-BINDING DOMAIN, STRUCTURAL GENOMICS, KEYWDS 3 NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND KEYWDS 4 FUNCTIONAL ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS KEYWDS 5 INITIATIVE, RSGI, CELL CYCLE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR K.MIYAMOTO,T.TOMIZAWA,S.KOSHIBA,S.WATANABE,T.HARADA, AUTHOR 2 T.KIGAWA,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 3 INITIATIVE (RSGI) REVDAT 2 24-FEB-09 2EA5 1 VERSN REVDAT 1 31-JUL-07 2EA5 0 JRNL AUTH K.MIYAMOTO,T.TOMIZAWA,S.KOSHIBA,S.WATANABE, JRNL AUTH 2 T.HARADA,T.KIGAWA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE RING DOMAIN OF THE HUMAN JRNL TITL 2 CELL GROWTH REGULATOR WITH RING FINGER DOMAIN 1 JRNL TITL 3 PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2EA5 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-FEB-07. REMARK 100 THE RCSB ID CODE IS RCSB026417. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 296 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.10MM RING DOMAIN U-13C,15N; REMARK 210 20MM D-TRIS-HCL(PH7.0); 100MM REMARK 210 NACL; 1MM D-DTT; 0.02% NAN3; REMARK 210 0.05MM ZNCL2; 1.0MM IDA; 90% REMARK 210 H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 900 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE II REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN 1.3, NMRPIPE REMARK 210 20031121, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9820, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 6 42.45 -97.82 REMARK 500 1 GLU A 13 43.39 -108.60 REMARK 500 1 SER A 15 133.40 -173.53 REMARK 500 1 GLN A 22 37.50 39.28 REMARK 500 1 LEU A 30 79.06 -101.97 REMARK 500 1 CYS A 33 -41.13 -28.86 REMARK 500 1 PRO A 50 9.03 -69.74 REMARK 500 1 MET A 51 -61.35 -122.14 REMARK 500 1 PRO A 65 2.72 -69.76 REMARK 500 2 SER A 3 115.84 -35.10 REMARK 500 2 PRO A 10 -172.86 -69.82 REMARK 500 2 ASP A 17 176.10 -50.32 REMARK 500 2 CYS A 39 173.30 -55.71 REMARK 500 2 PRO A 50 9.67 -69.70 REMARK 500 2 PHE A 55 108.71 -51.05 REMARK 500 2 PRO A 65 2.06 -69.71 REMARK 500 3 PRO A 10 -176.53 -69.67 REMARK 500 3 GLN A 22 46.45 29.73 REMARK 500 3 LEU A 30 71.46 -103.68 REMARK 500 3 CYS A 33 -40.72 -28.74 REMARK 500 3 ASP A 40 -19.05 -49.26 REMARK 500 3 GLN A 47 32.21 -83.72 REMARK 500 3 PRO A 50 9.73 -69.77 REMARK 500 3 PRO A 65 97.24 -69.81 REMARK 500 4 VAL A 8 77.34 -115.58 REMARK 500 4 SER A 11 49.72 -78.40 REMARK 500 4 VAL A 20 -54.36 -124.59 REMARK 500 4 CYS A 33 -41.16 -28.50 REMARK 500 4 PRO A 50 9.35 -69.72 REMARK 500 5 SER A 3 172.24 -46.74 REMARK 500 5 SER A 6 38.91 38.26 REMARK 500 5 SER A 11 49.76 -79.30 REMARK 500 5 ASN A 14 52.98 -115.72 REMARK 500 5 LEU A 30 72.89 -105.89 REMARK 500 5 CYS A 33 -40.76 -29.65 REMARK 500 5 CYS A 39 174.44 -59.72 REMARK 500 5 PRO A 50 10.00 -69.70 REMARK 500 5 PHE A 55 109.72 -49.42 REMARK 500 6 GLU A 12 127.33 -35.75 REMARK 500 6 ASN A 23 -41.20 -133.96 REMARK 500 6 CYS A 33 -41.02 -29.72 REMARK 500 6 PRO A 50 9.56 -69.63 REMARK 500 6 VAL A 56 95.92 -68.43 REMARK 500 7 ASN A 14 101.99 -53.18 REMARK 500 7 LYS A 16 47.32 -101.32 REMARK 500 7 CYS A 33 -42.31 -28.03 REMARK 500 7 CYS A 39 167.07 -47.72 REMARK 500 7 PRO A 50 7.30 -69.78 REMARK 500 7 PHE A 55 112.01 -34.92 REMARK 500 7 PRO A 65 -178.94 -69.87 REMARK 500 8 SER A 15 -56.52 -122.14 REMARK 500 8 ASN A 23 -43.12 -133.03 REMARK 500 8 CYS A 33 -41.54 -28.55 REMARK 500 8 CYS A 39 171.21 -51.02 REMARK 500 8 PRO A 50 9.50 -69.82 REMARK 500 8 PHE A 55 115.44 -39.36 REMARK 500 8 SER A 67 100.87 -58.83 REMARK 500 9 GLU A 9 138.69 -39.10 REMARK 500 9 PRO A 10 -177.72 -69.73 REMARK 500 9 LYS A 16 67.45 -106.31 REMARK 500 9 CYS A 33 -43.19 -27.61 REMARK 500 9 CYS A 39 172.79 -56.42 REMARK 500 9 PRO A 50 9.90 -69.82 REMARK 500 10 PRO A 10 -174.58 -69.79 REMARK 500 10 ASN A 23 -33.00 -132.43 REMARK 500 10 CYS A 33 -42.41 -28.87 REMARK 500 10 CYS A 39 173.14 -53.96 REMARK 500 10 PRO A 50 8.50 -69.64 REMARK 500 11 SER A 11 48.77 -96.25 REMARK 500 11 SER A 15 -50.37 -128.61 REMARK 500 11 ASN A 23 -33.12 -132.94 REMARK 500 11 LEU A 30 74.34 -108.24 REMARK 500 11 CYS A 33 -38.78 -30.39 REMARK 500 11 PRO A 50 7.80 -69.62 REMARK 500 11 MET A 51 -65.64 -120.41 REMARK 500 11 PHE A 55 106.15 -45.91 REMARK 500 11 PRO A 65 94.76 -69.76 REMARK 500 12 VAL A 8 73.26 -115.16 REMARK 500 12 SER A 11 48.59 -98.44 REMARK 500 12 GLU A 12 38.10 34.19 REMARK 500 12 LEU A 30 71.21 -105.54 REMARK 500 12 CYS A 39 168.16 -48.41 REMARK 500 12 PRO A 50 7.36 -69.74 REMARK 500 12 SER A 63 102.70 -48.87 REMARK 500 12 PRO A 65 89.31 -69.71 REMARK 500 13 VAL A 8 147.43 -173.87 REMARK 500 13 LEU A 30 73.91 -105.83 REMARK 500 13 CYS A 33 -39.97 -29.60 REMARK 500 13 PRO A 50 8.43 -69.79 REMARK 500 13 PHE A 55 105.32 -52.13 REMARK 500 14 SER A 11 52.98 -91.84 REMARK 500 14 SER A 15 -50.46 -125.74 REMARK 500 14 ASN A 23 -44.91 -134.39 REMARK 500 14 LEU A 30 76.66 -101.73 REMARK 500 14 CYS A 33 -39.75 -29.50 REMARK 500 14 PRO A 50 7.26 -69.77 REMARK 500 14 PHE A 55 110.72 -39.44 REMARK 500 14 PRO A 65 13.94 -69.64 REMARK 500 14 SER A 66 -62.19 -28.87 REMARK 500 15 SER A 2 131.34 -173.04 REMARK 500 15 SER A 5 98.39 -65.31 REMARK 500 15 SER A 11 45.36 -98.20 REMARK 500 15 LYS A 16 44.17 -79.38 REMARK 500 15 VAL A 19 33.48 -96.77 REMARK 500 15 VAL A 20 -56.99 -126.67 REMARK 500 15 ASN A 23 -38.37 -132.52 REMARK 500 15 CYS A 33 -40.79 -28.72 REMARK 500 15 GLN A 47 32.00 -79.64 REMARK 500 15 PRO A 50 8.72 -69.73 REMARK 500 15 SER A 63 108.29 -57.57 REMARK 500 15 PRO A 65 10.40 -69.76 REMARK 500 16 VAL A 8 76.62 -60.94 REMARK 500 16 CYS A 33 -43.63 -27.33 REMARK 500 16 CYS A 39 178.29 -57.15 REMARK 500 16 GLN A 47 -19.39 -47.63 REMARK 500 16 PRO A 50 7.56 -69.83 REMARK 500 16 PHE A 55 107.63 -44.29 REMARK 500 17 GLU A 9 150.46 -47.17 REMARK 500 17 ASN A 14 46.16 -78.20 REMARK 500 17 LYS A 16 41.36 35.59 REMARK 500 17 ASP A 17 -62.18 -120.44 REMARK 500 17 GLN A 22 35.97 39.36 REMARK 500 17 LEU A 30 76.37 -100.66 REMARK 500 17 CYS A 33 -42.96 -28.55 REMARK 500 17 CYS A 39 175.62 -53.16 REMARK 500 17 PRO A 50 6.63 -69.73 REMARK 500 17 SER A 63 49.54 -80.66 REMARK 500 17 SER A 66 83.33 -69.96 REMARK 500 18 SER A 6 43.27 39.28 REMARK 500 18 VAL A 8 78.40 -68.93 REMARK 500 18 PRO A 10 -174.29 -69.71 REMARK 500 18 SER A 11 43.71 -86.46 REMARK 500 18 LYS A 16 40.09 -91.35 REMARK 500 18 VAL A 20 -47.02 -130.54 REMARK 500 18 ASN A 23 -33.98 -134.19 REMARK 500 18 CYS A 33 -43.28 -26.99 REMARK 500 18 PRO A 50 7.93 -69.79 REMARK 500 18 PHE A 55 108.28 -48.47 REMARK 500 18 PRO A 65 9.45 -69.79 REMARK 500 18 SER A 67 125.96 -39.27 REMARK 500 19 SER A 5 113.93 -36.15 REMARK 500 19 SER A 6 41.88 -94.45 REMARK 500 19 GLU A 9 152.12 -44.09 REMARK 500 19 PRO A 10 -177.57 -69.76 REMARK 500 19 SER A 11 42.01 -104.02 REMARK 500 19 ASN A 23 -34.91 -132.86 REMARK 500 19 CYS A 33 -39.90 -29.65 REMARK 500 19 PRO A 50 11.27 -69.81 REMARK 500 19 PHE A 55 108.98 -47.51 REMARK 500 19 VAL A 56 99.99 -67.80 REMARK 500 19 PRO A 65 2.61 -69.78 REMARK 500 20 VAL A 8 145.69 -174.75 REMARK 500 20 ASN A 14 42.16 -84.21 REMARK 500 20 LYS A 16 63.65 -108.85 REMARK 500 20 LEU A 30 79.96 -102.54 REMARK 500 20 CYS A 33 -41.46 -28.19 REMARK 500 20 THR A 36 46.47 -77.82 REMARK 500 20 CYS A 37 39.25 -92.77 REMARK 500 20 PRO A 50 8.66 -69.81 REMARK 500 20 PRO A 65 93.96 -69.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 18 SG REMARK 620 2 CYS A 21 SG 113.9 REMARK 620 3 CYS A 39 SG 97.1 97.9 REMARK 620 4 CYS A 42 SG 113.1 114.4 118.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 33 SG REMARK 620 2 HIS A 35 ND1 101.2 REMARK 620 3 CYS A 49 SG 112.9 106.1 REMARK 620 4 CYS A 52 SG 104.3 130.0 102.3 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 201 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSI002014256.1 RELATED DB: TARGETDB DBREF 2EA5 A 8 62 UNP Q99675 CGRF1_HUMAN 264 318 SEQADV 2EA5 GLY A 1 UNP Q99675 CLONING ARTIFACT SEQADV 2EA5 SER A 2 UNP Q99675 CLONING ARTIFACT SEQADV 2EA5 SER A 3 UNP Q99675 CLONING ARTIFACT SEQADV 2EA5 GLY A 4 UNP Q99675 CLONING ARTIFACT SEQADV 2EA5 SER A 5 UNP Q99675 CLONING ARTIFACT SEQADV 2EA5 SER A 6 UNP Q99675 CLONING ARTIFACT SEQADV 2EA5 GLY A 7 UNP Q99675 CLONING ARTIFACT SEQADV 2EA5 SER A 63 UNP Q99675 CLONING ARTIFACT SEQADV 2EA5 GLY A 64 UNP Q99675 CLONING ARTIFACT SEQADV 2EA5 PRO A 65 UNP Q99675 CLONING ARTIFACT SEQADV 2EA5 SER A 66 UNP Q99675 CLONING ARTIFACT SEQADV 2EA5 SER A 67 UNP Q99675 CLONING ARTIFACT SEQADV 2EA5 GLY A 68 UNP Q99675 CLONING ARTIFACT SEQRES 1 A 68 GLY SER SER GLY SER SER GLY VAL GLU PRO SER GLU GLU SEQRES 2 A 68 ASN SER LYS ASP CYS VAL VAL CYS GLN ASN GLY THR VAL SEQRES 3 A 68 ASN TRP VAL LEU LEU PRO CYS ARG HIS THR CYS LEU CYS SEQRES 4 A 68 ASP GLY CYS VAL LYS TYR PHE GLN GLN CYS PRO MET CYS SEQRES 5 A 68 ARG GLN PHE VAL GLN GLU SER PHE ALA LEU SER GLY PRO SEQRES 6 A 68 SER SER GLY HET ZN A 201 1 HET ZN A 401 1 HETNAM ZN ZINC ION FORMUL 2 ZN 2(ZN 2+) HELIX 1 1 GLY A 41 PHE A 46 1 6 SHEET 1 A 2 VAL A 29 LEU A 30 0 SHEET 2 A 2 SER A 59 PHE A 60 -1 O PHE A 60 N VAL A 29 LINK ZN ZN A 201 SG CYS A 18 1555 1555 2.39 LINK ZN ZN A 201 SG CYS A 21 1555 1555 2.33 LINK ZN ZN A 201 SG CYS A 39 1555 1555 2.39 LINK ZN ZN A 201 SG CYS A 42 1555 1555 2.19 LINK ZN ZN A 401 SG CYS A 33 1555 1555 2.38 LINK ZN ZN A 401 ND1 HIS A 35 1555 1555 1.90 LINK ZN ZN A 401 SG CYS A 49 1555 1555 2.38 LINK ZN ZN A 401 SG CYS A 52 1555 1555 2.19 CISPEP 1 LEU A 31 PRO A 32 1 -0.21 CISPEP 2 LEU A 31 PRO A 32 2 -0.09 CISPEP 3 LEU A 31 PRO A 32 3 -0.03 CISPEP 4 LEU A 31 PRO A 32 4 -0.27 CISPEP 5 LEU A 31 PRO A 32 5 -0.09 CISPEP 6 LEU A 31 PRO A 32 6 -0.18 CISPEP 7 LEU A 31 PRO A 32 7 -0.24 CISPEP 8 LEU A 31 PRO A 32 8 -0.09 CISPEP 9 LEU A 31 PRO A 32 9 -0.16 CISPEP 10 LEU A 31 PRO A 32 10 -0.07 CISPEP 11 LEU A 31 PRO A 32 11 -0.04 CISPEP 12 LEU A 31 PRO A 32 12 -0.07 CISPEP 13 LEU A 31 PRO A 32 13 -0.26 CISPEP 14 LEU A 31 PRO A 32 14 -0.19 CISPEP 15 LEU A 31 PRO A 32 15 -0.12 CISPEP 16 LEU A 31 PRO A 32 16 -0.08 CISPEP 17 LEU A 31 PRO A 32 17 -0.16 CISPEP 18 LEU A 31 PRO A 32 18 -0.16 CISPEP 19 LEU A 31 PRO A 32 19 -0.14 CISPEP 20 LEU A 31 PRO A 32 20 -0.16 SITE 1 AC1 4 CYS A 18 CYS A 21 CYS A 39 CYS A 42 SITE 1 AC2 4 CYS A 33 HIS A 35 CYS A 49 CYS A 52 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1