data_2EDF # _entry.id 2EDF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2EDF pdb_00002edf 10.2210/pdb2edf/pdb RCSB RCSB026526 ? ? WWPDB D_1000026526 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsk002001528.6 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2EDF _pdbx_database_status.recvd_initial_deposition_date 2007-02-14 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wakabayashi, M.' 1 'Yoshida, M.' 2 'Hayashi, F.' 3 'Yokoyama, S.' 4 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 5 # _citation.id primary _citation.title 'Solution structure of the second ig-like domain(2826-2915) from human Obscurin' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wakabayashi, M.' 1 ? primary 'Yoshida, M.' 2 ? primary 'Hayashi, F.' 3 ? primary 'Yokoyama, S.' 4 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description Obscurin _entity.formula_weight 10919.293 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'ig-like domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Obscurin-myosin light chain kinase, Obscurin-MLCK, Obscurin-RhoGEF' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGPAAIIKPLEDQWVAPGEDVELRCELSRAGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTC EVEASKSTASLHVEEKASGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGPAAIIKPLEDQWVAPGEDVELRCELSRAGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTC EVEASKSTASLHVEEKASGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsk002001528.6 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 PRO n 1 9 ALA n 1 10 ALA n 1 11 ILE n 1 12 ILE n 1 13 LYS n 1 14 PRO n 1 15 LEU n 1 16 GLU n 1 17 ASP n 1 18 GLN n 1 19 TRP n 1 20 VAL n 1 21 ALA n 1 22 PRO n 1 23 GLY n 1 24 GLU n 1 25 ASP n 1 26 VAL n 1 27 GLU n 1 28 LEU n 1 29 ARG n 1 30 CYS n 1 31 GLU n 1 32 LEU n 1 33 SER n 1 34 ARG n 1 35 ALA n 1 36 GLY n 1 37 THR n 1 38 PRO n 1 39 VAL n 1 40 HIS n 1 41 TRP n 1 42 LEU n 1 43 LYS n 1 44 ASP n 1 45 ARG n 1 46 LYS n 1 47 ALA n 1 48 ILE n 1 49 ARG n 1 50 LYS n 1 51 SER n 1 52 GLN n 1 53 LYS n 1 54 TYR n 1 55 ASP n 1 56 VAL n 1 57 VAL n 1 58 CYS n 1 59 GLU n 1 60 GLY n 1 61 THR n 1 62 MET n 1 63 ALA n 1 64 MET n 1 65 LEU n 1 66 VAL n 1 67 ILE n 1 68 ARG n 1 69 GLY n 1 70 ALA n 1 71 SER n 1 72 LEU n 1 73 LYS n 1 74 ASP n 1 75 ALA n 1 76 GLY n 1 77 GLU n 1 78 TYR n 1 79 THR n 1 80 CYS n 1 81 GLU n 1 82 VAL n 1 83 GLU n 1 84 ALA n 1 85 SER n 1 86 LYS n 1 87 SER n 1 88 THR n 1 89 ALA n 1 90 SER n 1 91 LEU n 1 92 HIS n 1 93 VAL n 1 94 GLU n 1 95 GLU n 1 96 LYS n 1 97 ALA n 1 98 SER n 1 99 GLY n 1 100 PRO n 1 101 SER n 1 102 SER n 1 103 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene OBSCN _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P051216-03 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'cell free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code OBSCN_HUMAN _struct_ref.pdbx_db_accession Q5VST9 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PAAIIKPLEDQWVAPGEDVELRCELSRAGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEASKS TASLHVEEKA ; _struct_ref.pdbx_align_begin 2826 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2EDF _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 97 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q5VST9 _struct_ref_seq.db_align_beg 2826 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 2915 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 97 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2EDF GLY A 1 ? UNP Q5VST9 ? ? 'cloning artifact' 1 1 1 2EDF SER A 2 ? UNP Q5VST9 ? ? 'cloning artifact' 2 2 1 2EDF SER A 3 ? UNP Q5VST9 ? ? 'cloning artifact' 3 3 1 2EDF GLY A 4 ? UNP Q5VST9 ? ? 'cloning artifact' 4 4 1 2EDF SER A 5 ? UNP Q5VST9 ? ? 'cloning artifact' 5 5 1 2EDF SER A 6 ? UNP Q5VST9 ? ? 'cloning artifact' 6 6 1 2EDF GLY A 7 ? UNP Q5VST9 ? ? 'cloning artifact' 7 7 1 2EDF SER A 98 ? UNP Q5VST9 ? ? 'cloning artifact' 98 8 1 2EDF GLY A 99 ? UNP Q5VST9 ? ? 'cloning artifact' 99 9 1 2EDF PRO A 100 ? UNP Q5VST9 ? ? 'cloning artifact' 100 10 1 2EDF SER A 101 ? UNP Q5VST9 ? ? 'cloning artifact' 101 11 1 2EDF SER A 102 ? UNP Q5VST9 ? ? 'cloning artifact' 102 12 1 2EDF GLY A 103 ? UNP Q5VST9 ? ? 'cloning artifact' 103 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_13C-separated_NOESY 1 2 1 3D_15N-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 293 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.14mM 13C, 15N-laveled protein; 20mM d-Tris-HCl (pH7.0);100mM NaCl; 1mM d-DTT; 0.02% NaN3; 10% D2O, 90% H2O' _pdbx_nmr_sample_details.solvent_system '10% D2O, 90% H2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model INOVA _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2EDF _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2EDF _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations, target function' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2EDF _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection VNMR 6.1C Varian 1 processing NMRPipe 20031121 Delaglio,F. 2 'data analysis' NMRView 5.0.4 Johnson,B.A. 3 'data analysis' KUJIRA 0.9815 Kobayashi,N. 4 'structure solution' CYANA 2.0.17 Guntert.P. 5 refinement CYANA 2.0.17 Guntert.P. 6 # _exptl.entry_id 2EDF _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2EDF _struct.title 'Solution structure of the second ig-like domain(2826-2915) from human Obscurin' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2EDF _struct_keywords.pdbx_keywords 'CONTRACTILE PROTEIN' _struct_keywords.text ;beta-sandwich, IG-fold, Obscurin-myosin light chain kinase, Obscurin-MLCK, Obscurin-RhoGEF, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, CONTRACTILE PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 4 ? C ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 11 ? LYS A 13 ? ILE A 11 LYS A 13 A 2 GLU A 31 ? LEU A 32 ? GLU A 31 LEU A 32 B 1 GLN A 18 ? VAL A 20 ? GLN A 18 VAL A 20 B 2 LYS A 86 ? VAL A 93 ? LYS A 86 VAL A 93 B 3 GLU A 77 ? GLU A 81 ? GLU A 77 GLU A 81 B 4 TRP A 41 ? LYS A 43 ? TRP A 41 LYS A 43 C 1 VAL A 26 ? LEU A 28 ? VAL A 26 LEU A 28 C 2 MET A 62 ? ILE A 67 ? MET A 62 ILE A 67 C 3 TYR A 54 ? GLU A 59 ? TYR A 54 GLU A 59 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 12 ? N ILE A 12 O GLU A 31 ? O GLU A 31 B 1 2 N GLN A 18 ? N GLN A 18 O HIS A 92 ? O HIS A 92 B 2 3 O SER A 87 ? O SER A 87 N CYS A 80 ? N CYS A 80 B 3 4 O THR A 79 ? O THR A 79 N LEU A 42 ? N LEU A 42 C 1 2 N VAL A 26 ? N VAL A 26 O ILE A 67 ? O ILE A 67 C 2 3 O MET A 62 ? O MET A 62 N GLU A 59 ? N GLU A 59 # _database_PDB_matrix.entry_id 2EDF _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2EDF _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 PRO 8 8 8 PRO PRO A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 ILE 11 11 11 ILE ILE A . n A 1 12 ILE 12 12 12 ILE ILE A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 PRO 14 14 14 PRO PRO A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 TRP 19 19 19 TRP TRP A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 PRO 22 22 22 PRO PRO A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 GLU 24 24 24 GLU GLU A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 GLU 27 27 27 GLU GLU A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 ARG 29 29 29 ARG ARG A . n A 1 30 CYS 30 30 30 CYS CYS A . n A 1 31 GLU 31 31 31 GLU GLU A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 SER 33 33 33 SER SER A . n A 1 34 ARG 34 34 34 ARG ARG A . n A 1 35 ALA 35 35 35 ALA ALA A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 THR 37 37 37 THR THR A . n A 1 38 PRO 38 38 38 PRO PRO A . n A 1 39 VAL 39 39 39 VAL VAL A . n A 1 40 HIS 40 40 40 HIS HIS A . n A 1 41 TRP 41 41 41 TRP TRP A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 ASP 44 44 44 ASP ASP A . n A 1 45 ARG 45 45 45 ARG ARG A . n A 1 46 LYS 46 46 46 LYS LYS A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 ILE 48 48 48 ILE ILE A . n A 1 49 ARG 49 49 49 ARG ARG A . n A 1 50 LYS 50 50 50 LYS LYS A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 GLN 52 52 52 GLN GLN A . n A 1 53 LYS 53 53 53 LYS LYS A . n A 1 54 TYR 54 54 54 TYR TYR A . n A 1 55 ASP 55 55 55 ASP ASP A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 CYS 58 58 58 CYS CYS A . n A 1 59 GLU 59 59 59 GLU GLU A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 THR 61 61 61 THR THR A . n A 1 62 MET 62 62 62 MET MET A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 MET 64 64 64 MET MET A . n A 1 65 LEU 65 65 65 LEU LEU A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 ILE 67 67 67 ILE ILE A . n A 1 68 ARG 68 68 68 ARG ARG A . n A 1 69 GLY 69 69 69 GLY GLY A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 SER 71 71 71 SER SER A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 ASP 74 74 74 ASP ASP A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 GLY 76 76 76 GLY GLY A . n A 1 77 GLU 77 77 77 GLU GLU A . n A 1 78 TYR 78 78 78 TYR TYR A . n A 1 79 THR 79 79 79 THR THR A . n A 1 80 CYS 80 80 80 CYS CYS A . n A 1 81 GLU 81 81 81 GLU GLU A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 GLU 83 83 83 GLU GLU A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 LYS 86 86 86 LYS LYS A . n A 1 87 SER 87 87 87 SER SER A . n A 1 88 THR 88 88 88 THR THR A . n A 1 89 ALA 89 89 89 ALA ALA A . n A 1 90 SER 90 90 90 SER SER A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 HIS 92 92 92 HIS HIS A . n A 1 93 VAL 93 93 93 VAL VAL A . n A 1 94 GLU 94 94 94 GLU GLU A . n A 1 95 GLU 95 95 95 GLU GLU A . n A 1 96 LYS 96 96 96 LYS LYS A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 SER 98 98 98 SER SER A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 PRO 100 100 100 PRO PRO A . n A 1 101 SER 101 101 101 SER SER A . n A 1 102 SER 102 102 102 SER SER A . n A 1 103 GLY 103 103 103 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-08-14 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_struct_assembly 4 3 'Structure model' pdbx_struct_oper_list 5 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_software.name' 4 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 5 ? ? -38.79 138.67 2 1 PRO A 8 ? ? -69.77 -178.49 3 1 LEU A 15 ? ? -66.99 -176.62 4 1 PRO A 22 ? ? -69.71 85.20 5 1 THR A 61 ? ? 36.99 42.80 6 1 ILE A 67 ? ? -106.78 74.92 7 1 GLU A 83 ? ? -30.97 -71.25 8 2 SER A 3 ? ? -43.92 155.15 9 2 ALA A 10 ? ? -47.80 164.34 10 2 PRO A 22 ? ? -69.72 87.62 11 2 GLN A 52 ? ? -34.51 -36.97 12 2 PRO A 100 ? ? -69.71 89.01 13 3 ALA A 9 ? ? -84.38 44.66 14 3 PRO A 22 ? ? -69.74 87.08 15 3 ASP A 44 ? ? 72.44 51.73 16 3 GLU A 59 ? ? -108.58 79.93 17 3 THR A 61 ? ? -105.71 40.70 18 3 LEU A 72 ? ? -39.84 -38.59 19 3 GLU A 83 ? ? -29.30 -70.06 20 3 LYS A 96 ? ? -35.56 129.32 21 4 PRO A 22 ? ? -69.82 84.65 22 4 GLU A 83 ? ? -28.80 -67.59 23 4 LYS A 86 ? ? -170.12 128.24 24 5 ALA A 10 ? ? -62.02 -179.97 25 5 PRO A 22 ? ? -69.77 92.18 26 5 THR A 61 ? ? -97.89 39.80 27 5 ILE A 67 ? ? -109.29 77.31 28 5 LEU A 72 ? ? -38.69 -37.73 29 5 GLU A 83 ? ? -28.52 -71.98 30 6 PRO A 8 ? ? -69.75 -175.06 31 6 ALA A 10 ? ? -36.76 154.38 32 6 PRO A 22 ? ? -69.83 92.24 33 6 LYS A 50 ? ? -38.74 137.93 34 6 GLN A 52 ? ? -35.08 -38.98 35 6 GLU A 59 ? ? -101.21 48.21 36 6 THR A 61 ? ? -89.52 37.94 37 6 ILE A 67 ? ? -118.49 76.35 38 6 ASP A 74 ? ? -39.23 -36.02 39 6 GLU A 83 ? ? -29.74 -72.05 40 6 SER A 101 ? ? -35.61 125.65 41 7 ALA A 10 ? ? -42.70 158.69 42 7 LEU A 15 ? ? -66.50 -179.48 43 7 PRO A 22 ? ? -69.72 86.72 44 7 ALA A 35 ? ? -86.63 39.30 45 7 THR A 61 ? ? 39.54 42.31 46 7 ILE A 67 ? ? -119.96 77.15 47 7 LEU A 72 ? ? -39.52 -34.04 48 7 GLU A 83 ? ? -28.53 -72.04 49 7 LYS A 86 ? ? -175.69 149.44 50 8 SER A 5 ? ? -56.88 87.93 51 8 ALA A 9 ? ? -99.91 32.48 52 8 LEU A 15 ? ? -62.67 -176.19 53 8 PRO A 22 ? ? -69.71 89.45 54 8 LEU A 72 ? ? -39.74 -33.05 55 8 ASP A 74 ? ? -38.87 -31.49 56 9 PRO A 8 ? ? -69.81 -179.18 57 9 PRO A 22 ? ? -69.73 88.25 58 9 ILE A 67 ? ? -119.77 78.88 59 9 GLU A 83 ? ? -29.30 -70.60 60 9 LYS A 86 ? ? -175.35 147.13 61 10 SER A 5 ? ? -48.16 157.55 62 10 ALA A 10 ? ? -51.07 170.64 63 10 PRO A 22 ? ? -69.80 92.71 64 10 GLN A 52 ? ? -36.22 -31.03 65 10 ILE A 67 ? ? -109.93 76.48 66 10 GLU A 83 ? ? -32.16 -72.53 67 11 PRO A 22 ? ? -69.79 87.95 68 11 CYS A 58 ? ? -171.11 111.30 69 11 LYS A 96 ? ? -34.52 125.23 70 12 ALA A 9 ? ? -83.50 41.48 71 12 PRO A 22 ? ? -69.75 85.24 72 12 ALA A 35 ? ? -65.84 -174.64 73 12 ASP A 44 ? ? 73.71 49.70 74 12 GLU A 59 ? ? -114.43 -74.93 75 12 THR A 61 ? ? 45.57 26.66 76 12 LYS A 86 ? ? -175.22 144.73 77 13 SER A 6 ? ? -171.70 114.76 78 13 PRO A 22 ? ? -69.76 85.24 79 13 GLN A 52 ? ? -35.35 -35.92 80 13 THR A 61 ? ? 35.33 44.51 81 13 ASP A 74 ? ? -38.18 -34.50 82 13 LYS A 86 ? ? -175.97 148.12 83 13 LYS A 96 ? ? -37.69 126.91 84 14 ALA A 9 ? ? -78.51 45.96 85 14 PRO A 22 ? ? -69.70 91.13 86 14 ASP A 44 ? ? 74.93 43.18 87 14 ILE A 67 ? ? -109.36 79.58 88 14 GLU A 83 ? ? -30.31 -72.83 89 14 LYS A 86 ? ? -176.11 147.94 90 14 LYS A 96 ? ? -97.39 41.71 91 14 SER A 101 ? ? -43.98 154.08 92 15 ALA A 10 ? ? -39.39 157.85 93 15 PRO A 22 ? ? -69.78 90.58 94 15 ALA A 84 ? ? -133.24 -33.43 95 15 SER A 98 ? ? -68.80 88.73 96 15 PRO A 100 ? ? -69.77 2.70 97 15 SER A 101 ? ? 74.52 50.85 98 16 SER A 6 ? ? -56.20 88.17 99 16 PRO A 8 ? ? -69.74 -170.26 100 16 PRO A 22 ? ? -69.70 87.95 101 16 ALA A 35 ? ? -67.72 -176.48 102 16 THR A 61 ? ? -87.40 37.53 103 16 LYS A 86 ? ? -174.67 142.05 104 16 LYS A 96 ? ? -39.06 134.21 105 17 SER A 3 ? ? -174.83 145.10 106 17 LEU A 15 ? ? -66.67 -176.33 107 17 PRO A 22 ? ? -69.76 89.99 108 17 ASP A 44 ? ? 71.65 49.65 109 17 GLN A 52 ? ? -38.24 -31.98 110 17 CYS A 58 ? ? -169.32 115.12 111 17 LEU A 72 ? ? -39.64 -37.95 112 17 GLU A 83 ? ? -26.83 -72.86 113 17 LYS A 86 ? ? -175.68 143.92 114 17 PRO A 100 ? ? -69.70 90.18 115 18 ALA A 9 ? ? -83.59 33.73 116 18 ALA A 10 ? ? -57.94 171.94 117 18 PRO A 22 ? ? -69.74 88.26 118 18 GLU A 59 ? ? -87.93 42.05 119 18 ILE A 67 ? ? -104.60 79.57 120 18 GLU A 83 ? ? -29.20 -73.52 121 18 LYS A 86 ? ? -175.59 147.65 122 18 PRO A 100 ? ? -69.80 91.10 123 19 ALA A 10 ? ? -37.28 155.98 124 19 LEU A 15 ? ? -66.40 -177.57 125 19 PRO A 22 ? ? -69.71 87.29 126 19 GLN A 52 ? ? -38.81 -28.33 127 19 GLU A 83 ? ? -32.21 -72.52 128 20 PRO A 22 ? ? -69.75 86.09 129 20 GLN A 52 ? ? -39.29 -39.99 130 20 ILE A 67 ? ? -111.87 74.61 131 20 ALA A 75 ? ? -39.95 119.45 132 20 GLU A 83 ? ? -29.20 -69.17 133 20 LYS A 86 ? ? -176.27 142.10 #