data_2EDY # _entry.id 2EDY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2EDY pdb_00002edy 10.2210/pdb2edy/pdb RCSB RCSB026545 ? ? WWPDB D_1000026545 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsk003001516.3 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2EDY _pdbx_database_status.recvd_initial_deposition_date 2007-02-15 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sato, M.' 1 'Koshiba, S.' 2 'Watanabe, S.' 3 'Harada, T.' 4 'Kigawa, T.' 5 'Yokoyama, S.' 6 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 7 # _citation.id primary _citation.title 'Solution structures of the fn3 domain of human receptor-type tyrosine-protein phosphatase F' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sato, M.' 1 ? primary 'Koshiba, S.' 2 ? primary 'Watanabe, S.' 3 ? primary 'Harada, T.' 4 ? primary 'Kigawa, T.' 5 ? primary 'Yokoyama, S.' 6 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Receptor-type tyrosine-protein phosphatase F' _entity.formula_weight 11149.364 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec 3.1.3.48 _entity.pdbx_mutation ? _entity.pdbx_fragment 'Fibronectin type III domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'LAR protein, Leukocyte antigen related' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGPSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQQELQNITTDTRFTLTGLKPDTTYDIK VRAWTSKGSGPLSPSIQSRTMPV ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGPSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQQELQNITTDTRFTLTGLKPDTTYDIK VRAWTSKGSGPLSPSIQSRTMPV ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsk003001516.3 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 PRO n 1 9 SER n 1 10 GLY n 1 11 PHE n 1 12 PRO n 1 13 GLN n 1 14 ASN n 1 15 LEU n 1 16 HIS n 1 17 VAL n 1 18 THR n 1 19 GLY n 1 20 LEU n 1 21 THR n 1 22 THR n 1 23 SER n 1 24 THR n 1 25 THR n 1 26 GLU n 1 27 LEU n 1 28 ALA n 1 29 TRP n 1 30 ASP n 1 31 PRO n 1 32 PRO n 1 33 VAL n 1 34 LEU n 1 35 ALA n 1 36 GLU n 1 37 ARG n 1 38 ASN n 1 39 GLY n 1 40 ARG n 1 41 ILE n 1 42 ILE n 1 43 SER n 1 44 TYR n 1 45 THR n 1 46 VAL n 1 47 VAL n 1 48 PHE n 1 49 ARG n 1 50 ASP n 1 51 ILE n 1 52 ASN n 1 53 SER n 1 54 GLN n 1 55 GLN n 1 56 GLU n 1 57 LEU n 1 58 GLN n 1 59 ASN n 1 60 ILE n 1 61 THR n 1 62 THR n 1 63 ASP n 1 64 THR n 1 65 ARG n 1 66 PHE n 1 67 THR n 1 68 LEU n 1 69 THR n 1 70 GLY n 1 71 LEU n 1 72 LYS n 1 73 PRO n 1 74 ASP n 1 75 THR n 1 76 THR n 1 77 TYR n 1 78 ASP n 1 79 ILE n 1 80 LYS n 1 81 VAL n 1 82 ARG n 1 83 ALA n 1 84 TRP n 1 85 THR n 1 86 SER n 1 87 LYS n 1 88 GLY n 1 89 SER n 1 90 GLY n 1 91 PRO n 1 92 LEU n 1 93 SER n 1 94 PRO n 1 95 SER n 1 96 ILE n 1 97 GLN n 1 98 SER n 1 99 ARG n 1 100 THR n 1 101 MET n 1 102 PRO n 1 103 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene PTPRF _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P060123-21 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PTPRF_HUMAN _struct_ref.pdbx_db_accession P10586 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQQELQNITTDTRFTLTGLKPDTTYDIKVRAWTSK GSGPLSPSIQSRTMPV ; _struct_ref.pdbx_align_begin 905 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2EDY _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 103 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P10586 _struct_ref_seq.db_align_beg 905 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1000 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 103 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2EDY GLY A 1 ? UNP P10586 ? ? 'expression tag' 1 1 1 2EDY SER A 2 ? UNP P10586 ? ? 'expression tag' 2 2 1 2EDY SER A 3 ? UNP P10586 ? ? 'expression tag' 3 3 1 2EDY GLY A 4 ? UNP P10586 ? ? 'expression tag' 4 4 1 2EDY SER A 5 ? UNP P10586 ? ? 'expression tag' 5 5 1 2EDY SER A 6 ? UNP P10586 ? ? 'expression tag' 6 6 1 2EDY GLY A 7 ? UNP P10586 ? ? 'expression tag' 7 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_13C-separated_NOESY 1 2 1 3D_15N-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1mM fn3 domain U-15N, 13C; 20mM d-Tris HCl; 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 700 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2EDY _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2EDY _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations, target function' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2EDY _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20031121 'Delaglio, F.' 2 'data analysis' NMRView 2.0.17 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.932 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 2EDY _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2EDY _struct.title 'Solution structures of the fn3 domain of human receptor-type tyrosine-protein phosphatase F' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2EDY _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text ;EC 3.1.3.48, LAR protein, Leukocyte antigen related, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, SIGNALING PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? C ? 3 ? D ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 13 ? HIS A 16 ? GLN A 13 HIS A 16 A 2 ALA A 28 ? ASP A 30 ? ALA A 28 ASP A 30 B 1 THR A 25 ? GLU A 26 ? THR A 25 GLU A 26 B 2 THR A 67 ? LEU A 68 ? THR A 67 LEU A 68 C 1 GLU A 56 ? THR A 61 ? GLU A 56 THR A 61 C 2 SER A 43 ? ASP A 50 ? SER A 43 ASP A 50 C 3 TYR A 77 ? LYS A 80 ? TYR A 77 LYS A 80 D 1 GLU A 56 ? THR A 61 ? GLU A 56 THR A 61 D 2 SER A 43 ? ASP A 50 ? SER A 43 ASP A 50 D 3 ALA A 83 ? TRP A 84 ? ALA A 83 TRP A 84 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLN A 13 ? N GLN A 13 O ASP A 30 ? O ASP A 30 B 1 2 N THR A 25 ? N THR A 25 O LEU A 68 ? O LEU A 68 C 1 2 O LEU A 57 ? O LEU A 57 N PHE A 48 ? N PHE A 48 C 2 3 N ARG A 49 ? N ARG A 49 O ASP A 78 ? O ASP A 78 D 1 2 O LEU A 57 ? O LEU A 57 N PHE A 48 ? N PHE A 48 D 2 3 N SER A 43 ? N SER A 43 O TRP A 84 ? O TRP A 84 # _database_PDB_matrix.entry_id 2EDY _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2EDY _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 PRO 8 8 8 PRO PRO A . n A 1 9 SER 9 9 9 SER SER A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 PHE 11 11 11 PHE PHE A . n A 1 12 PRO 12 12 12 PRO PRO A . n A 1 13 GLN 13 13 13 GLN GLN A . n A 1 14 ASN 14 14 14 ASN ASN A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 HIS 16 16 16 HIS HIS A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 THR 18 18 18 THR THR A . n A 1 19 GLY 19 19 19 GLY GLY A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 THR 21 21 21 THR THR A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 THR 24 24 24 THR THR A . n A 1 25 THR 25 25 25 THR THR A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 TRP 29 29 29 TRP TRP A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 PRO 31 31 31 PRO PRO A . n A 1 32 PRO 32 32 32 PRO PRO A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 ALA 35 35 35 ALA ALA A . n A 1 36 GLU 36 36 36 GLU GLU A . n A 1 37 ARG 37 37 37 ARG ARG A . n A 1 38 ASN 38 38 38 ASN ASN A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 ARG 40 40 40 ARG ARG A . n A 1 41 ILE 41 41 41 ILE ILE A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 SER 43 43 43 SER SER A . n A 1 44 TYR 44 44 44 TYR TYR A . n A 1 45 THR 45 45 45 THR THR A . n A 1 46 VAL 46 46 46 VAL VAL A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 PHE 48 48 48 PHE PHE A . n A 1 49 ARG 49 49 49 ARG ARG A . n A 1 50 ASP 50 50 50 ASP ASP A . n A 1 51 ILE 51 51 51 ILE ILE A . n A 1 52 ASN 52 52 52 ASN ASN A . n A 1 53 SER 53 53 53 SER SER A . n A 1 54 GLN 54 54 54 GLN GLN A . n A 1 55 GLN 55 55 55 GLN GLN A . n A 1 56 GLU 56 56 56 GLU GLU A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 ASN 59 59 59 ASN ASN A . n A 1 60 ILE 60 60 60 ILE ILE A . n A 1 61 THR 61 61 61 THR THR A . n A 1 62 THR 62 62 62 THR THR A . n A 1 63 ASP 63 63 63 ASP ASP A . n A 1 64 THR 64 64 64 THR THR A . n A 1 65 ARG 65 65 65 ARG ARG A . n A 1 66 PHE 66 66 66 PHE PHE A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 GLY 70 70 70 GLY GLY A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 PRO 73 73 73 PRO PRO A . n A 1 74 ASP 74 74 74 ASP ASP A . n A 1 75 THR 75 75 75 THR THR A . n A 1 76 THR 76 76 76 THR THR A . n A 1 77 TYR 77 77 77 TYR TYR A . n A 1 78 ASP 78 78 78 ASP ASP A . n A 1 79 ILE 79 79 79 ILE ILE A . n A 1 80 LYS 80 80 80 LYS LYS A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 ARG 82 82 82 ARG ARG A . n A 1 83 ALA 83 83 83 ALA ALA A . n A 1 84 TRP 84 84 84 TRP TRP A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 SER 86 86 86 SER SER A . n A 1 87 LYS 87 87 87 LYS LYS A . n A 1 88 GLY 88 88 88 GLY GLY A . n A 1 89 SER 89 89 89 SER SER A . n A 1 90 GLY 90 90 90 GLY GLY A . n A 1 91 PRO 91 91 91 PRO PRO A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 SER 93 93 93 SER SER A . n A 1 94 PRO 94 94 94 PRO PRO A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 ILE 96 96 96 ILE ILE A . n A 1 97 GLN 97 97 97 GLN GLN A . n A 1 98 SER 98 98 98 SER SER A . n A 1 99 ARG 99 99 99 ARG ARG A . n A 1 100 THR 100 100 100 THR THR A . n A 1 101 MET 101 101 101 MET MET A . n A 1 102 PRO 102 102 102 PRO PRO A . n A 1 103 VAL 103 103 103 VAL VAL A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-08-21 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_nmr_spectrometer 4 3 'Structure model' pdbx_struct_assembly 5 3 'Structure model' pdbx_struct_oper_list 6 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_software.name' 4 3 'Structure model' '_pdbx_nmr_spectrometer.model' 5 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 28 ? ? -167.05 107.92 2 1 ASN A 38 ? ? -89.37 39.59 3 1 ILE A 42 ? ? -130.99 -34.70 4 1 ASP A 78 ? ? -68.02 98.39 5 1 SER A 95 ? ? -48.92 152.35 6 1 THR A 100 ? ? -44.45 154.89 7 2 PRO A 12 ? ? -69.72 -179.16 8 2 ALA A 28 ? ? -167.70 110.46 9 2 ARG A 37 ? ? -35.63 100.09 10 2 ASP A 78 ? ? -66.16 98.19 11 2 THR A 100 ? ? -42.92 152.09 12 2 PRO A 102 ? ? -69.74 91.83 13 3 SER A 5 ? ? -163.28 110.92 14 3 ALA A 28 ? ? -164.75 109.64 15 3 ARG A 37 ? ? -44.75 168.95 16 3 ASP A 78 ? ? -66.75 97.53 17 3 SER A 95 ? ? -46.18 150.25 18 3 PRO A 102 ? ? -69.73 98.78 19 4 ALA A 28 ? ? -169.36 107.16 20 4 GLU A 36 ? ? -101.48 47.99 21 4 ASN A 38 ? ? -81.89 49.20 22 4 PRO A 91 ? ? -69.79 -176.87 23 4 SER A 95 ? ? -45.47 156.45 24 4 THR A 100 ? ? -40.06 158.62 25 5 HIS A 16 ? ? -171.27 -176.20 26 5 ALA A 28 ? ? -167.15 105.00 27 5 ASP A 78 ? ? -64.88 96.21 28 5 THR A 100 ? ? -42.54 155.67 29 6 SER A 2 ? ? -81.56 42.31 30 6 SER A 6 ? ? -102.32 -66.05 31 6 ALA A 28 ? ? -167.49 107.35 32 6 GLU A 36 ? ? -110.07 50.69 33 6 SER A 95 ? ? -42.90 155.28 34 6 THR A 100 ? ? -41.82 151.19 35 7 SER A 2 ? ? -49.84 102.27 36 7 ALA A 28 ? ? -166.02 109.22 37 7 ILE A 42 ? ? -131.50 -33.64 38 7 ASP A 78 ? ? -66.83 96.67 39 7 THR A 100 ? ? -43.65 151.89 40 8 SER A 5 ? ? 34.82 43.62 41 8 ALA A 28 ? ? -167.07 107.37 42 8 GLU A 36 ? ? -111.90 54.91 43 8 SER A 43 ? ? -172.59 -179.60 44 8 ASP A 78 ? ? -67.02 96.84 45 8 SER A 86 ? ? -38.55 -27.11 46 8 PRO A 91 ? ? -69.80 -178.67 47 8 THR A 100 ? ? -43.49 156.49 48 8 PRO A 102 ? ? -69.74 96.88 49 9 ALA A 28 ? ? -168.06 110.74 50 9 ASN A 38 ? ? -109.14 43.70 51 9 ASP A 78 ? ? -66.75 94.54 52 9 THR A 100 ? ? -45.03 164.76 53 9 PRO A 102 ? ? -69.77 97.40 54 10 ALA A 28 ? ? -163.29 112.03 55 10 VAL A 33 ? ? -36.13 134.73 56 10 ASP A 78 ? ? -66.17 98.12 57 10 PRO A 91 ? ? -69.71 -174.01 58 10 PRO A 102 ? ? -69.69 99.83 59 11 SER A 3 ? ? -88.15 39.93 60 11 ALA A 28 ? ? -164.18 109.29 61 11 LEU A 34 ? ? -37.59 -33.95 62 11 ASN A 38 ? ? -88.98 35.83 63 11 LEU A 68 ? ? -55.64 176.55 64 11 ASP A 78 ? ? -64.60 92.92 65 11 PRO A 91 ? ? -69.76 -179.72 66 11 SER A 95 ? ? -47.23 155.78 67 11 THR A 100 ? ? -42.52 154.01 68 11 PRO A 102 ? ? -69.71 95.09 69 12 SER A 3 ? ? -84.15 43.48 70 12 SER A 9 ? ? -109.82 46.73 71 12 ALA A 28 ? ? -168.68 108.18 72 12 LEU A 34 ? ? -34.27 -32.94 73 12 ASP A 78 ? ? -61.36 97.91 74 12 THR A 100 ? ? -40.38 160.43 75 12 PRO A 102 ? ? -69.74 88.23 76 13 SER A 5 ? ? -107.84 42.01 77 13 ALA A 28 ? ? -167.05 106.06 78 13 VAL A 33 ? ? -34.37 127.00 79 13 GLU A 36 ? ? -100.55 73.59 80 13 ASN A 38 ? ? -38.74 -36.19 81 13 PRO A 91 ? ? -69.76 -178.65 82 13 SER A 95 ? ? -48.36 154.01 83 13 THR A 100 ? ? -45.40 152.23 84 13 PRO A 102 ? ? -69.76 93.02 85 14 ALA A 28 ? ? -171.82 106.10 86 14 ASN A 38 ? ? -91.12 32.75 87 14 ASP A 78 ? ? -65.99 94.44 88 14 THR A 100 ? ? -40.16 155.57 89 14 PRO A 102 ? ? -69.72 98.39 90 15 ALA A 28 ? ? -164.72 107.31 91 15 VAL A 33 ? ? -34.81 136.83 92 15 LEU A 34 ? ? -39.84 -28.30 93 15 ALA A 35 ? ? -63.45 -73.17 94 15 GLU A 36 ? ? -67.46 95.75 95 15 ARG A 37 ? ? -162.32 108.94 96 15 ASN A 38 ? ? -92.08 35.78 97 15 ASP A 78 ? ? -63.99 97.09 98 15 THR A 100 ? ? -41.56 152.28 99 15 PRO A 102 ? ? -69.77 96.82 100 16 HIS A 16 ? ? -171.01 -177.87 101 16 ALA A 28 ? ? -166.43 106.31 102 16 ARG A 37 ? ? -35.24 108.49 103 16 ASP A 78 ? ? -64.43 98.41 104 16 PRO A 91 ? ? -69.75 -179.90 105 16 SER A 95 ? ? -48.84 152.06 106 16 THR A 100 ? ? -42.52 156.47 107 17 SER A 6 ? ? -125.25 -55.26 108 17 ALA A 28 ? ? -169.06 110.38 109 17 GLU A 36 ? ? -112.86 61.67 110 17 ILE A 42 ? ? -131.53 -32.61 111 17 ASP A 78 ? ? -66.79 97.63 112 17 THR A 100 ? ? -43.41 166.98 113 17 PRO A 102 ? ? -69.72 98.86 114 18 SER A 2 ? ? -43.08 158.16 115 18 SER A 3 ? ? -43.03 150.54 116 18 ALA A 28 ? ? -167.01 105.24 117 18 LEU A 34 ? ? -36.23 -33.15 118 18 ASN A 38 ? ? -90.95 32.32 119 18 ASP A 78 ? ? -60.99 98.93 120 18 PRO A 91 ? ? -69.78 -177.59 121 18 THR A 100 ? ? -43.16 154.91 122 18 PRO A 102 ? ? -69.78 99.29 123 19 ALA A 28 ? ? -166.03 105.07 124 19 GLU A 36 ? ? -55.99 -73.64 125 19 ARG A 37 ? ? -37.41 103.54 126 19 ASP A 78 ? ? -67.04 97.52 127 19 PRO A 91 ? ? -69.71 -179.71 128 19 SER A 93 ? ? -47.49 154.72 129 19 SER A 95 ? ? -49.81 150.41 130 19 THR A 100 ? ? -45.35 154.13 131 19 PRO A 102 ? ? -69.75 98.32 132 20 HIS A 16 ? ? -170.30 -178.98 133 20 ALA A 28 ? ? -169.75 105.51 134 20 ARG A 37 ? ? -39.46 115.91 135 20 ILE A 51 ? ? -59.86 -9.90 136 20 ASP A 78 ? ? -66.78 98.78 137 20 SER A 95 ? ? -43.66 163.78 138 20 THR A 100 ? ? -41.47 154.56 139 20 PRO A 102 ? ? -69.79 98.03 #