data_2EEC # _entry.id 2EEC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2EEC pdb_00002eec 10.2210/pdb2eec/pdb RCSB RCSB026559 ? ? WWPDB D_1000026559 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsk003002600.16 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2EEC _pdbx_database_status.recvd_initial_deposition_date 2007-02-15 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tomizawa, T.' 1 'Koshiba, S.' 2 'Watanabe, S.' 3 'Harada, T.' 4 'Kigawa, T.' 5 'Yokoyama, S.' 6 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 7 # _citation.id primary _citation.title 'Solution structure of the 23th filamin domain from human Filamin-B' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tomizawa, T.' 1 ? primary 'Koshiba, S.' 2 ? primary 'Watanabe, S.' 3 ? primary 'Harada, T.' 4 ? primary 'Kigawa, T.' 5 ? primary 'Yokoyama, S.' 6 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description Filamin-B _entity.formula_weight 12769.269 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'filamin domain, Filamin 23' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name ;FLN-B, Beta-filamin, Actin-binding-like protein, Thyroid autoantigen, Truncated actin-binding protein, Truncated ABP, ABP- 280 homolog, ABP-278, Filamin 3, Filamin homolog 1, Fh1 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGFKVRVGEPGQAGNPALVSAYGTGLEGGTTGIQSEFFINTTRAGPGTLSVTIEGPSKVKMDCQETPEGYKVMYT PMAPGNYLISVKYGGPNHIVGSPFKAKVTGQRLVSPGSANETSSI ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGFKVRVGEPGQAGNPALVSAYGTGLEGGTTGIQSEFFINTTRAGPGTLSVTIEGPSKVKMDCQETPEGYKVMYT PMAPGNYLISVKYGGPNHIVGSPFKAKVTGQRLVSPGSANETSSI ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsk003002600.16 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 PHE n 1 9 LYS n 1 10 VAL n 1 11 ARG n 1 12 VAL n 1 13 GLY n 1 14 GLU n 1 15 PRO n 1 16 GLY n 1 17 GLN n 1 18 ALA n 1 19 GLY n 1 20 ASN n 1 21 PRO n 1 22 ALA n 1 23 LEU n 1 24 VAL n 1 25 SER n 1 26 ALA n 1 27 TYR n 1 28 GLY n 1 29 THR n 1 30 GLY n 1 31 LEU n 1 32 GLU n 1 33 GLY n 1 34 GLY n 1 35 THR n 1 36 THR n 1 37 GLY n 1 38 ILE n 1 39 GLN n 1 40 SER n 1 41 GLU n 1 42 PHE n 1 43 PHE n 1 44 ILE n 1 45 ASN n 1 46 THR n 1 47 THR n 1 48 ARG n 1 49 ALA n 1 50 GLY n 1 51 PRO n 1 52 GLY n 1 53 THR n 1 54 LEU n 1 55 SER n 1 56 VAL n 1 57 THR n 1 58 ILE n 1 59 GLU n 1 60 GLY n 1 61 PRO n 1 62 SER n 1 63 LYS n 1 64 VAL n 1 65 LYS n 1 66 MET n 1 67 ASP n 1 68 CYS n 1 69 GLN n 1 70 GLU n 1 71 THR n 1 72 PRO n 1 73 GLU n 1 74 GLY n 1 75 TYR n 1 76 LYS n 1 77 VAL n 1 78 MET n 1 79 TYR n 1 80 THR n 1 81 PRO n 1 82 MET n 1 83 ALA n 1 84 PRO n 1 85 GLY n 1 86 ASN n 1 87 TYR n 1 88 LEU n 1 89 ILE n 1 90 SER n 1 91 VAL n 1 92 LYS n 1 93 TYR n 1 94 GLY n 1 95 GLY n 1 96 PRO n 1 97 ASN n 1 98 HIS n 1 99 ILE n 1 100 VAL n 1 101 GLY n 1 102 SER n 1 103 PRO n 1 104 PHE n 1 105 LYS n 1 106 ALA n 1 107 LYS n 1 108 VAL n 1 109 THR n 1 110 GLY n 1 111 GLN n 1 112 ARG n 1 113 LEU n 1 114 VAL n 1 115 SER n 1 116 PRO n 1 117 GLY n 1 118 SER n 1 119 ALA n 1 120 ASN n 1 121 GLU n 1 122 THR n 1 123 SER n 1 124 SER n 1 125 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene FLNB _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P060619-24 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code FLNB_HUMAN _struct_ref.pdbx_db_accession O75369 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;FKVRVGEPGQAGNPALVSAYGTGLEGGTTGIQSEFFINTTRAGPGTLSVTIEGPSKVKMDCQETPEGYKVMYTPMAPGNY LISVKYGGPNHIVGSPFKAKVTGQRLVSPGSANETSSI ; _struct_ref.pdbx_align_begin 2371 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2EEC _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 125 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O75369 _struct_ref_seq.db_align_beg 2371 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 2488 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 125 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2EEC GLY A 1 ? UNP O75369 ? ? 'expression tag' 1 1 1 2EEC SER A 2 ? UNP O75369 ? ? 'expression tag' 2 2 1 2EEC SER A 3 ? UNP O75369 ? ? 'expression tag' 3 3 1 2EEC GLY A 4 ? UNP O75369 ? ? 'expression tag' 4 4 1 2EEC SER A 5 ? UNP O75369 ? ? 'expression tag' 5 5 1 2EEC SER A 6 ? UNP O75369 ? ? 'expression tag' 6 6 1 2EEC GLY A 7 ? UNP O75369 ? ? 'expression tag' 7 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_13C-separated_NOESY 1 2 1 3D_15N-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 296 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.14mM filamin domain U-15N,13C; 20mM d-Tris-HCl(pH 7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 10% D2O, 90% H2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model 'AVANCE II' _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 900 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2EEC _pdbx_nmr_refine.method 'torsion angle dynamics, restrainted molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2EEC _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations, structures with the lowest energy, target function' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2EEC _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection TopSpin 1.3 Bruker 1 processing NMRPipe 20060524 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.9823 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 2EEC _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2EEC _struct.title 'Solution structure of the 23th filamin domain from human Filamin-B' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2EEC _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN' _struct_keywords.text ;beta-sandwich, immunoglobulin-like fold, filamin, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, STRUCTURAL PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 102 A . ? SER 102 A PRO 103 A ? PRO 103 A 1 0.04 2 SER 102 A . ? SER 102 A PRO 103 A ? PRO 103 A 2 0.01 3 SER 102 A . ? SER 102 A PRO 103 A ? PRO 103 A 3 -0.02 4 SER 102 A . ? SER 102 A PRO 103 A ? PRO 103 A 4 -0.03 5 SER 102 A . ? SER 102 A PRO 103 A ? PRO 103 A 5 0.03 6 SER 102 A . ? SER 102 A PRO 103 A ? PRO 103 A 6 -0.02 7 SER 102 A . ? SER 102 A PRO 103 A ? PRO 103 A 7 0.07 8 SER 102 A . ? SER 102 A PRO 103 A ? PRO 103 A 8 -0.09 9 SER 102 A . ? SER 102 A PRO 103 A ? PRO 103 A 9 0.04 10 SER 102 A . ? SER 102 A PRO 103 A ? PRO 103 A 10 -0.04 11 SER 102 A . ? SER 102 A PRO 103 A ? PRO 103 A 11 0.01 12 SER 102 A . ? SER 102 A PRO 103 A ? PRO 103 A 12 -0.03 13 SER 102 A . ? SER 102 A PRO 103 A ? PRO 103 A 13 0.05 14 SER 102 A . ? SER 102 A PRO 103 A ? PRO 103 A 14 -0.01 15 SER 102 A . ? SER 102 A PRO 103 A ? PRO 103 A 15 0.05 16 SER 102 A . ? SER 102 A PRO 103 A ? PRO 103 A 16 -0.09 17 SER 102 A . ? SER 102 A PRO 103 A ? PRO 103 A 17 -0.04 18 SER 102 A . ? SER 102 A PRO 103 A ? PRO 103 A 18 -0.02 19 SER 102 A . ? SER 102 A PRO 103 A ? PRO 103 A 19 -0.07 20 SER 102 A . ? SER 102 A PRO 103 A ? PRO 103 A 20 -0.01 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 25 ? GLY A 28 ? SER A 25 GLY A 28 A 2 SER A 40 ? ASN A 45 ? SER A 40 ASN A 45 A 3 TYR A 75 ? TYR A 79 ? TYR A 75 TYR A 79 A 4 ASP A 67 ? GLU A 70 ? ASP A 67 GLU A 70 B 1 GLY A 34 ? THR A 35 ? GLY A 34 THR A 35 B 2 PHE A 104 ? THR A 109 ? PHE A 104 THR A 109 B 3 GLY A 85 ? TYR A 93 ? GLY A 85 TYR A 93 B 4 LEU A 54 ? GLU A 59 ? LEU A 54 GLU A 59 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER A 25 ? N SER A 25 O ASN A 45 ? O ASN A 45 A 2 3 N SER A 40 ? N SER A 40 O TYR A 79 ? O TYR A 79 A 3 4 O MET A 78 ? O MET A 78 N ASP A 67 ? N ASP A 67 B 1 2 N GLY A 34 ? N GLY A 34 O LYS A 107 ? O LYS A 107 B 2 3 O VAL A 108 ? O VAL A 108 N GLY A 85 ? N GLY A 85 B 3 4 O LEU A 88 ? O LEU A 88 N GLU A 59 ? N GLU A 59 # _database_PDB_matrix.entry_id 2EEC _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2EEC _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 PHE 8 8 8 PHE PHE A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 VAL 10 10 10 VAL VAL A . n A 1 11 ARG 11 11 11 ARG ARG A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 GLU 14 14 14 GLU GLU A . n A 1 15 PRO 15 15 15 PRO PRO A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 GLN 17 17 17 GLN GLN A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 GLY 19 19 19 GLY GLY A . n A 1 20 ASN 20 20 20 ASN ASN A . n A 1 21 PRO 21 21 21 PRO PRO A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 VAL 24 24 24 VAL VAL A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 TYR 27 27 27 TYR TYR A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 THR 29 29 29 THR THR A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 GLU 32 32 32 GLU GLU A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 THR 35 35 35 THR THR A . n A 1 36 THR 36 36 36 THR THR A . n A 1 37 GLY 37 37 37 GLY GLY A . n A 1 38 ILE 38 38 38 ILE ILE A . n A 1 39 GLN 39 39 39 GLN GLN A . n A 1 40 SER 40 40 40 SER SER A . n A 1 41 GLU 41 41 41 GLU GLU A . n A 1 42 PHE 42 42 42 PHE PHE A . n A 1 43 PHE 43 43 43 PHE PHE A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 ASN 45 45 45 ASN ASN A . n A 1 46 THR 46 46 46 THR THR A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 ARG 48 48 48 ARG ARG A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 GLY 50 50 50 GLY GLY A . n A 1 51 PRO 51 51 51 PRO PRO A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 THR 53 53 53 THR THR A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 THR 57 57 57 THR THR A . n A 1 58 ILE 58 58 58 ILE ILE A . n A 1 59 GLU 59 59 59 GLU GLU A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 PRO 61 61 61 PRO PRO A . n A 1 62 SER 62 62 62 SER SER A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 MET 66 66 66 MET MET A . n A 1 67 ASP 67 67 67 ASP ASP A . n A 1 68 CYS 68 68 68 CYS CYS A . n A 1 69 GLN 69 69 69 GLN GLN A . n A 1 70 GLU 70 70 70 GLU GLU A . n A 1 71 THR 71 71 71 THR THR A . n A 1 72 PRO 72 72 72 PRO PRO A . n A 1 73 GLU 73 73 73 GLU GLU A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 TYR 75 75 75 TYR TYR A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 MET 78 78 78 MET MET A . n A 1 79 TYR 79 79 79 TYR TYR A . n A 1 80 THR 80 80 80 THR THR A . n A 1 81 PRO 81 81 81 PRO PRO A . n A 1 82 MET 82 82 82 MET MET A . n A 1 83 ALA 83 83 83 ALA ALA A . n A 1 84 PRO 84 84 84 PRO PRO A . n A 1 85 GLY 85 85 85 GLY GLY A . n A 1 86 ASN 86 86 86 ASN ASN A . n A 1 87 TYR 87 87 87 TYR TYR A . n A 1 88 LEU 88 88 88 LEU LEU A . n A 1 89 ILE 89 89 89 ILE ILE A . n A 1 90 SER 90 90 90 SER SER A . n A 1 91 VAL 91 91 91 VAL VAL A . n A 1 92 LYS 92 92 92 LYS LYS A . n A 1 93 TYR 93 93 93 TYR TYR A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 GLY 95 95 95 GLY GLY A . n A 1 96 PRO 96 96 96 PRO PRO A . n A 1 97 ASN 97 97 97 ASN ASN A . n A 1 98 HIS 98 98 98 HIS HIS A . n A 1 99 ILE 99 99 99 ILE ILE A . n A 1 100 VAL 100 100 100 VAL VAL A . n A 1 101 GLY 101 101 101 GLY GLY A . n A 1 102 SER 102 102 102 SER SER A . n A 1 103 PRO 103 103 103 PRO PRO A . n A 1 104 PHE 104 104 104 PHE PHE A . n A 1 105 LYS 105 105 105 LYS LYS A . n A 1 106 ALA 106 106 106 ALA ALA A . n A 1 107 LYS 107 107 107 LYS LYS A . n A 1 108 VAL 108 108 108 VAL VAL A . n A 1 109 THR 109 109 109 THR THR A . n A 1 110 GLY 110 110 110 GLY GLY A . n A 1 111 GLN 111 111 111 GLN GLN A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 LEU 113 113 113 LEU LEU A . n A 1 114 VAL 114 114 114 VAL VAL A . n A 1 115 SER 115 115 115 SER SER A . n A 1 116 PRO 116 116 116 PRO PRO A . n A 1 117 GLY 117 117 117 GLY GLY A . n A 1 118 SER 118 118 118 SER SER A . n A 1 119 ALA 119 119 119 ALA ALA A . n A 1 120 ASN 120 120 120 ASN ASN A . n A 1 121 GLU 121 121 121 GLU GLU A . n A 1 122 THR 122 122 122 THR THR A . n A 1 123 SER 123 123 123 SER SER A . n A 1 124 SER 124 124 124 SER SER A . n A 1 125 ILE 125 125 125 ILE ILE A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-08-21 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_struct_assembly 4 3 'Structure model' pdbx_struct_oper_list 5 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_software.name' 4 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 6 ? ? -160.27 119.89 2 1 VAL A 12 ? ? -69.50 96.62 3 1 PRO A 51 ? ? -69.75 1.34 4 1 LYS A 65 ? ? -67.09 95.64 5 1 GLN A 111 ? ? -38.34 150.40 6 1 ARG A 112 ? ? -44.33 162.87 7 2 SER A 3 ? ? -172.53 144.25 8 2 SER A 5 ? ? -172.18 107.51 9 2 ASN A 45 ? ? -63.21 86.85 10 2 GLN A 111 ? ? -36.13 148.07 11 3 PHE A 8 ? ? -51.84 98.34 12 3 PRO A 84 ? ? -69.75 -179.91 13 3 ARG A 112 ? ? -38.81 139.29 14 3 SER A 124 ? ? -46.61 173.18 15 4 SER A 2 ? ? -170.58 130.28 16 4 SER A 3 ? ? -57.78 175.92 17 4 LYS A 63 ? ? -42.68 158.11 18 4 ARG A 112 ? ? -34.85 144.98 19 4 SER A 118 ? ? -48.23 165.59 20 5 SER A 2 ? ? -171.07 107.74 21 5 LYS A 63 ? ? -49.71 161.23 22 5 ASN A 97 ? ? -59.27 109.73 23 5 GLN A 111 ? ? -39.72 133.83 24 5 SER A 115 ? ? -112.18 78.15 25 5 SER A 123 ? ? -37.68 129.83 26 6 SER A 2 ? ? -173.26 143.95 27 6 LYS A 9 ? ? -47.78 161.26 28 6 GLN A 17 ? ? -36.00 143.76 29 6 ASN A 45 ? ? -62.86 91.58 30 6 LYS A 65 ? ? -103.09 48.54 31 6 GLN A 111 ? ? 32.25 44.43 32 6 SER A 124 ? ? -125.71 -66.98 33 7 PRO A 51 ? ? -69.74 93.31 34 7 LYS A 65 ? ? -67.73 73.69 35 7 PRO A 84 ? ? -69.87 -179.89 36 7 PRO A 96 ? ? -69.82 1.59 37 7 SER A 115 ? ? -39.03 144.62 38 7 SER A 118 ? ? -34.87 98.27 39 7 THR A 122 ? ? -45.44 151.58 40 8 SER A 5 ? ? -35.44 146.01 41 8 PHE A 8 ? ? -46.62 164.14 42 8 VAL A 12 ? ? -171.14 147.29 43 8 ALA A 18 ? ? 39.22 41.82 44 8 LYS A 63 ? ? -40.76 151.65 45 8 ARG A 112 ? ? -36.35 120.38 46 8 GLU A 121 ? ? -54.71 99.94 47 9 SER A 2 ? ? -42.66 150.04 48 9 SER A 3 ? ? -121.86 -55.94 49 9 ASN A 45 ? ? -57.97 84.04 50 9 LYS A 65 ? ? -78.59 48.15 51 9 MET A 66 ? ? -53.09 -176.99 52 9 TYR A 75 ? ? -171.22 129.43 53 9 GLN A 111 ? ? -38.98 111.22 54 9 ARG A 112 ? ? -41.68 163.51 55 10 SER A 3 ? ? -121.38 -54.81 56 10 PHE A 8 ? ? -35.22 109.59 57 10 VAL A 24 ? ? -37.02 125.60 58 10 ASN A 45 ? ? -93.88 50.36 59 10 THR A 46 ? ? -84.58 46.08 60 10 PRO A 72 ? ? -69.78 1.43 61 10 LEU A 113 ? ? -49.73 106.76 62 10 SER A 123 ? ? 35.44 43.41 63 11 GLN A 17 ? ? -57.12 100.85 64 11 PRO A 84 ? ? -69.83 -179.96 65 11 ASN A 97 ? ? -46.03 108.75 66 11 ARG A 112 ? ? -36.33 114.32 67 12 ALA A 18 ? ? -107.14 44.41 68 12 THR A 46 ? ? -109.33 53.94 69 12 PRO A 72 ? ? -69.81 2.17 70 13 THR A 46 ? ? -94.55 41.75 71 13 LYS A 63 ? ? -42.14 154.66 72 13 CYS A 68 ? ? -47.06 164.55 73 13 GLN A 69 ? ? -171.36 116.41 74 13 ASN A 97 ? ? -52.53 104.75 75 14 SER A 6 ? ? -100.22 -62.67 76 14 ASN A 45 ? ? -63.47 84.03 77 14 GLN A 69 ? ? -170.10 112.52 78 14 ARG A 112 ? ? -39.97 115.58 79 14 SER A 124 ? ? -42.72 156.63 80 15 PHE A 8 ? ? -131.72 -57.34 81 15 LYS A 9 ? ? 39.18 40.27 82 15 THR A 46 ? ? -99.57 42.97 83 15 TYR A 75 ? ? -166.64 108.52 84 15 PRO A 84 ? ? -69.75 -179.59 85 15 PRO A 96 ? ? -69.77 2.69 86 15 ARG A 112 ? ? -52.94 99.62 87 15 VAL A 114 ? ? -132.51 -55.42 88 15 PRO A 116 ? ? -69.77 -178.17 89 16 LYS A 9 ? ? -106.11 41.06 90 16 ASN A 45 ? ? -61.99 97.06 91 16 MET A 66 ? ? -39.56 150.05 92 16 GLN A 111 ? ? 32.41 49.43 93 16 ASN A 120 ? ? -169.37 112.95 94 17 SER A 3 ? ? -105.22 40.80 95 17 GLU A 32 ? ? -38.57 -36.67 96 17 ASN A 45 ? ? -65.40 87.89 97 17 ASP A 67 ? ? -113.23 77.50 98 17 CYS A 68 ? ? -58.95 99.90 99 17 TYR A 75 ? ? -164.96 117.68 100 17 GLN A 111 ? ? -121.04 -56.28 101 17 ARG A 112 ? ? -172.97 121.71 102 17 SER A 115 ? ? -47.17 152.76 103 18 PHE A 8 ? ? -68.69 98.66 104 18 ASN A 45 ? ? -58.60 91.33 105 18 PRO A 51 ? ? -69.72 -177.64 106 18 LYS A 63 ? ? -35.33 93.72 107 18 PRO A 96 ? ? -69.78 1.50 108 18 HIS A 98 ? ? -59.46 172.85 109 18 LEU A 113 ? ? -100.69 60.44 110 19 PRO A 15 ? ? -69.78 88.75 111 19 ASN A 45 ? ? -62.98 92.93 112 19 GLN A 69 ? ? -161.39 112.25 113 19 ARG A 112 ? ? -45.90 109.84 114 19 LEU A 113 ? ? -93.32 40.83 115 19 VAL A 114 ? ? -54.49 99.13 116 20 VAL A 12 ? ? -53.74 106.04 117 20 LYS A 65 ? ? -36.35 145.54 118 20 TYR A 75 ? ? -169.98 111.81 119 20 PRO A 81 ? ? -69.74 90.16 120 20 PRO A 103 ? ? -69.76 -179.55 121 20 PRO A 116 ? ? -69.85 -176.19 122 20 ASN A 120 ? ? -43.86 162.54 #