HEADER STRUCTURAL PROTEIN 07-MAR-07 2EHR TITLE SOLUTION STRUCTURE OF THE SIXTH PDZ DOMAIN OF HUMAN INAD-LIKE PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: INAD-LIKE PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PDZ DOMAIN; COMPND 5 SYNONYM: INADL PROTEIN, HINADL, PALS1-ASSOCIATED TIGHT JUNCTION COMPND 6 PROTEIN, PROTEIN ASSOCIATED TO TIGHT JUNCTIONS; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: INADL, PATJ; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P060313-18; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS PDZ DOMAIN, INAD-LIKE PROTEIN, INADL PROTEIN, HINADL, PALS1- KEYWDS 2 ASSOCIATED TIGHT JUNCTION PROTEIN, PROTEIN ASSOCIATED TO TIGHT KEYWDS 3 JUNCTIONS, INADL, PATJ, STRUCTURAL GENOMICS, NPPSFA, NATIONAL KEYWDS 4 PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN KEYWDS 5 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, STRUCTURAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR K.INOUE,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 2 INITIATIVE (RSGI) REVDAT 3 09-MAR-22 2EHR 1 REMARK SEQADV REVDAT 2 24-FEB-09 2EHR 1 VERSN REVDAT 1 11-SEP-07 2EHR 0 JRNL AUTH K.INOUE,F.HAYASHI,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE SIXTH PDZ DOMAIN OF HUMAN JRNL TITL 2 INAD-LIKE PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMR 6.1C, CYANA 2.1 REMARK 3 AUTHORS : VARIAN (VNMR), GUNTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2EHR COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-APR-07. REMARK 100 THE DEPOSITION ID IS D_1000026680. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.19MM U-15N, 13C-LABELED REMARK 210 PROTEIN; 20MM D-TRIS-HCL; 100MM REMARK 210 NACL; 1MM D-DTT; 0.02% NAN3; 90% REMARK 210 H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20060324, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9807, CYANA 2.1 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 8 71.20 -69.76 REMARK 500 1 PRO A 25 -90.89 -69.78 REMARK 500 1 LEU A 43 -32.91 -34.53 REMARK 500 1 ASP A 60 39.13 -82.51 REMARK 500 1 ASN A 67 23.25 43.62 REMARK 500 1 SER A 79 17.24 59.79 REMARK 500 1 SER A 87 -175.44 -67.46 REMARK 500 1 ASN A 100 136.75 -39.42 REMARK 500 1 SER A 110 86.72 -52.87 REMARK 500 1 PRO A 113 -163.80 -69.75 REMARK 500 2 PRO A 8 0.51 -69.76 REMARK 500 2 ASN A 9 146.96 -34.40 REMARK 500 2 PRO A 25 -90.87 -69.72 REMARK 500 2 GLN A 37 151.70 -35.23 REMARK 500 2 THR A 38 -174.28 -176.46 REMARK 500 2 GLU A 48 176.72 -59.59 REMARK 500 2 ASP A 60 38.95 -82.56 REMARK 500 2 ASN A 67 25.14 40.79 REMARK 500 2 SER A 79 18.14 59.58 REMARK 500 2 GLN A 84 -70.29 -42.28 REMARK 500 2 ASN A 85 35.01 -90.81 REMARK 500 2 ASN A 100 133.23 -36.39 REMARK 500 2 SER A 110 75.62 -61.21 REMARK 500 2 THR A 112 151.12 58.33 REMARK 500 2 PRO A 113 -163.83 -69.75 REMARK 500 3 SER A 3 -74.40 -108.62 REMARK 500 3 PRO A 25 -90.81 -69.77 REMARK 500 3 SER A 28 -166.52 -79.65 REMARK 500 3 ARG A 42 85.80 -66.22 REMARK 500 3 ASN A 45 -70.61 -114.93 REMARK 500 3 ASP A 60 38.77 -83.01 REMARK 500 3 ASN A 67 23.66 42.95 REMARK 500 3 ASP A 73 175.76 -51.09 REMARK 500 3 ASN A 85 34.26 -92.86 REMARK 500 3 SER A 87 -175.41 -60.40 REMARK 500 3 ASN A 100 132.86 -37.58 REMARK 500 3 SER A 110 101.99 -38.03 REMARK 500 3 PRO A 113 -163.81 -69.76 REMARK 500 4 SER A 6 95.76 -39.23 REMARK 500 4 PRO A 8 2.86 -69.70 REMARK 500 4 SER A 11 175.18 -47.33 REMARK 500 4 PRO A 25 -90.77 -69.81 REMARK 500 4 GLN A 37 151.96 -39.75 REMARK 500 4 LYS A 41 151.55 -45.71 REMARK 500 4 ASP A 60 38.62 -82.91 REMARK 500 4 ASN A 67 24.10 42.40 REMARK 500 4 ASN A 100 132.19 -35.57 REMARK 500 4 PRO A 101 -175.85 -69.73 REMARK 500 4 SER A 110 100.53 -45.24 REMARK 500 4 PRO A 113 -163.84 -69.74 REMARK 500 REMARK 500 THIS ENTRY HAS 293 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSO003006830.7 RELATED DB: TARGETDB DBREF 2EHR A 8 117 UNP Q8NI35 INADL_HUMAN 1058 1167 SEQADV 2EHR GLY A 1 UNP Q8NI35 EXPRESSION TAG SEQADV 2EHR SER A 2 UNP Q8NI35 EXPRESSION TAG SEQADV 2EHR SER A 3 UNP Q8NI35 EXPRESSION TAG SEQADV 2EHR GLY A 4 UNP Q8NI35 EXPRESSION TAG SEQADV 2EHR SER A 5 UNP Q8NI35 EXPRESSION TAG SEQADV 2EHR SER A 6 UNP Q8NI35 EXPRESSION TAG SEQADV 2EHR GLY A 7 UNP Q8NI35 EXPRESSION TAG SEQRES 1 A 117 GLY SER SER GLY SER SER GLY PRO ASN PHE SER HIS TRP SEQRES 2 A 117 GLY PRO PRO ARG ILE VAL GLU ILE PHE ARG GLU PRO ASN SEQRES 3 A 117 VAL SER LEU GLY ILE SER ILE VAL GLY GLY GLN THR VAL SEQRES 4 A 117 ILE LYS ARG LEU LYS ASN GLY GLU GLU LEU LYS GLY ILE SEQRES 5 A 117 PHE ILE LYS GLN VAL LEU GLU ASP SER PRO ALA GLY LYS SEQRES 6 A 117 THR ASN ALA LEU LYS THR GLY ASP LYS ILE LEU GLU VAL SEQRES 7 A 117 SER GLY VAL ASP LEU GLN ASN ALA SER HIS SER GLU ALA SEQRES 8 A 117 VAL GLU ALA ILE LYS ASN ALA GLY ASN PRO VAL VAL PHE SEQRES 9 A 117 ILE VAL GLN SER LEU SER SER THR PRO ARG VAL ILE PRO HELIX 1 1 SER A 87 ASN A 97 1 11 SHEET 1 A 5 ARG A 17 ILE A 21 0 SHEET 2 A 5 VAL A 102 VAL A 106 -1 O VAL A 102 N ILE A 21 SHEET 3 A 5 LYS A 74 VAL A 78 -1 N GLU A 77 O ILE A 105 SHEET 4 A 5 ILE A 52 VAL A 57 -1 N ILE A 52 O ILE A 75 SHEET 5 A 5 ILE A 31 ILE A 33 -1 N SER A 32 O LYS A 55 CISPEP 1 ASN A 100 PRO A 101 1 0.06 CISPEP 2 ASN A 100 PRO A 101 2 -0.02 CISPEP 3 ASN A 100 PRO A 101 3 -0.04 CISPEP 4 ASN A 100 PRO A 101 4 -0.07 CISPEP 5 ASN A 100 PRO A 101 5 -0.01 CISPEP 6 ASN A 100 PRO A 101 6 -0.09 CISPEP 7 ASN A 100 PRO A 101 7 -0.09 CISPEP 8 ASN A 100 PRO A 101 8 -0.06 CISPEP 9 ASN A 100 PRO A 101 9 -0.07 CISPEP 10 ASN A 100 PRO A 101 10 -0.11 CISPEP 11 ASN A 100 PRO A 101 11 -0.09 CISPEP 12 ASN A 100 PRO A 101 12 -0.15 CISPEP 13 ASN A 100 PRO A 101 13 0.00 CISPEP 14 ASN A 100 PRO A 101 14 -0.09 CISPEP 15 ASN A 100 PRO A 101 15 -0.04 CISPEP 16 ASN A 100 PRO A 101 16 -0.07 CISPEP 17 ASN A 100 PRO A 101 17 -0.06 CISPEP 18 ASN A 100 PRO A 101 18 -0.07 CISPEP 19 ASN A 100 PRO A 101 19 -0.03 CISPEP 20 ASN A 100 PRO A 101 20 -0.02 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1