data_2EKX # _entry.id 2EKX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2EKX pdb_00002ekx 10.2210/pdb2ekx/pdb RCSB RCSB026791 ? ? WWPDB D_1000026791 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsi002011645.2 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2EKX _pdbx_database_status.recvd_initial_deposition_date 2007-03-26 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kasai, T.' 1 'Koshiba, S.' 2 'Watanabe, S.' 3 'Harada, T.' 4 'Kigawa, T.' 5 'Yokoyama, S.' 6 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 7 # _citation.id primary _citation.title 'Solution structure of the human BMX SH2 domain' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kasai, T.' 1 ? primary 'Koshiba, S.' 2 ? primary 'Watanabe, S.' 3 ? primary 'Harada, T.' 4 ? primary 'Kigawa, T.' 5 ? primary 'Yokoyama, S.' 6 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Cytoplasmic tyrosine-protein kinase BMX' _entity.formula_weight 12395.862 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec 2.7.10.2 _entity.pdbx_mutation ? _entity.pdbx_fragment 'SH2 domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Bone marrow tyrosine kinase gene in chromosome X protein, Epithelial and endothelial tyrosine kinase, ETK, NTK38' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGLDDYDWFAGNISRSQSEQLLRQKGKEGAFMVRNSSQVGMYTVSLFSKAVNDKKGTVKHYHVHTNAENKLYLAE NYCFDSIPKLIHYHQHNSAGMITRLRHPVS ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGLDDYDWFAGNISRSQSEQLLRQKGKEGAFMVRNSSQVGMYTVSLFSKAVNDKKGTVKHYHVHTNAENKLYLAE NYCFDSIPKLIHYHQHNSAGMITRLRHPVS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsi002011645.2 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 LEU n 1 9 ASP n 1 10 ASP n 1 11 TYR n 1 12 ASP n 1 13 TRP n 1 14 PHE n 1 15 ALA n 1 16 GLY n 1 17 ASN n 1 18 ILE n 1 19 SER n 1 20 ARG n 1 21 SER n 1 22 GLN n 1 23 SER n 1 24 GLU n 1 25 GLN n 1 26 LEU n 1 27 LEU n 1 28 ARG n 1 29 GLN n 1 30 LYS n 1 31 GLY n 1 32 LYS n 1 33 GLU n 1 34 GLY n 1 35 ALA n 1 36 PHE n 1 37 MET n 1 38 VAL n 1 39 ARG n 1 40 ASN n 1 41 SER n 1 42 SER n 1 43 GLN n 1 44 VAL n 1 45 GLY n 1 46 MET n 1 47 TYR n 1 48 THR n 1 49 VAL n 1 50 SER n 1 51 LEU n 1 52 PHE n 1 53 SER n 1 54 LYS n 1 55 ALA n 1 56 VAL n 1 57 ASN n 1 58 ASP n 1 59 LYS n 1 60 LYS n 1 61 GLY n 1 62 THR n 1 63 VAL n 1 64 LYS n 1 65 HIS n 1 66 TYR n 1 67 HIS n 1 68 VAL n 1 69 HIS n 1 70 THR n 1 71 ASN n 1 72 ALA n 1 73 GLU n 1 74 ASN n 1 75 LYS n 1 76 LEU n 1 77 TYR n 1 78 LEU n 1 79 ALA n 1 80 GLU n 1 81 ASN n 1 82 TYR n 1 83 CYS n 1 84 PHE n 1 85 ASP n 1 86 SER n 1 87 ILE n 1 88 PRO n 1 89 LYS n 1 90 LEU n 1 91 ILE n 1 92 HIS n 1 93 TYR n 1 94 HIS n 1 95 GLN n 1 96 HIS n 1 97 ASN n 1 98 SER n 1 99 ALA n 1 100 GLY n 1 101 MET n 1 102 ILE n 1 103 THR n 1 104 ARG n 1 105 LEU n 1 106 ARG n 1 107 HIS n 1 108 PRO n 1 109 VAL n 1 110 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene BMX _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P061225-65 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BMX_HUMAN _struct_ref.pdbx_db_accession P51813 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LDDYDWFAGNISRSQSEQLLRQKGKEGAFMVRNSSQVGMYTVSLFSKAVNDKKGTVKHYHVHTNAENKLYLAENYCFDSI PKLIHYHQHNSAGMITRLRHPVS ; _struct_ref.pdbx_align_begin 291 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2EKX _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 110 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P51813 _struct_ref_seq.db_align_beg 291 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 393 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 110 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2EKX GLY A 1 ? UNP P51813 ? ? 'expression tag' 1 1 1 2EKX SER A 2 ? UNP P51813 ? ? 'expression tag' 2 2 1 2EKX SER A 3 ? UNP P51813 ? ? 'expression tag' 3 3 1 2EKX GLY A 4 ? UNP P51813 ? ? 'expression tag' 4 4 1 2EKX SER A 5 ? UNP P51813 ? ? 'expression tag' 5 5 1 2EKX SER A 6 ? UNP P51813 ? ? 'expression tag' 6 6 1 2EKX GLY A 7 ? UNP P51813 ? ? 'expression tag' 7 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 296 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.13mM SH2 domain U-15N, 13C; 20mM d-Tris-HCl(pH 7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2EKX _pdbx_nmr_refine.method 'torsion angle dynamics, restrainted molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2EKX _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations, structures with the lowest energy, target function' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2EKX _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20031121 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.9810 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 2EKX _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2EKX _struct.title 'Solution structure of the human BMX SH2 domain' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2EKX _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text ;SH2 domain, Phosphotyrosine binding domain, Protein Tyrosine Kinase, Signal Transduction, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, SIGNALING PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 19 ? LYS A 30 ? SER A 19 LYS A 30 1 ? 12 HELX_P HELX_P2 2 SER A 86 ? ASN A 97 ? SER A 86 ASN A 97 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 64 ? HIS A 67 ? LYS A 64 HIS A 67 A 2 TYR A 47 ? LEU A 51 ? TYR A 47 LEU A 51 A 3 ALA A 35 ? ASN A 40 ? ALA A 35 ASN A 40 A 4 HIS A 107 ? PRO A 108 ? HIS A 107 PRO A 108 B 1 HIS A 69 ? THR A 70 ? HIS A 69 THR A 70 B 2 LEU A 76 ? TYR A 77 ? LEU A 76 TYR A 77 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LYS A 64 ? O LYS A 64 N LEU A 51 ? N LEU A 51 A 2 3 O THR A 48 ? O THR A 48 N ARG A 39 ? N ARG A 39 A 3 4 N PHE A 36 ? N PHE A 36 O HIS A 107 ? O HIS A 107 B 1 2 N HIS A 69 ? N HIS A 69 O TYR A 77 ? O TYR A 77 # _database_PDB_matrix.entry_id 2EKX _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2EKX _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 ASP 9 9 9 ASP ASP A . n A 1 10 ASP 10 10 10 ASP ASP A . n A 1 11 TYR 11 11 11 TYR TYR A . n A 1 12 ASP 12 12 12 ASP ASP A . n A 1 13 TRP 13 13 13 TRP TRP A . n A 1 14 PHE 14 14 14 PHE PHE A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 ASN 17 17 17 ASN ASN A . n A 1 18 ILE 18 18 18 ILE ILE A . n A 1 19 SER 19 19 19 SER SER A . n A 1 20 ARG 20 20 20 ARG ARG A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 GLN 22 22 22 GLN GLN A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 GLU 24 24 24 GLU GLU A . n A 1 25 GLN 25 25 25 GLN GLN A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 GLN 29 29 29 GLN GLN A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 GLU 33 33 33 GLU GLU A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 ALA 35 35 35 ALA ALA A . n A 1 36 PHE 36 36 36 PHE PHE A . n A 1 37 MET 37 37 37 MET MET A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 ARG 39 39 39 ARG ARG A . n A 1 40 ASN 40 40 40 ASN ASN A . n A 1 41 SER 41 41 41 SER SER A . n A 1 42 SER 42 42 42 SER SER A . n A 1 43 GLN 43 43 43 GLN GLN A . n A 1 44 VAL 44 44 44 VAL VAL A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 MET 46 46 46 MET MET A . n A 1 47 TYR 47 47 47 TYR TYR A . n A 1 48 THR 48 48 48 THR THR A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 LEU 51 51 51 LEU LEU A . n A 1 52 PHE 52 52 52 PHE PHE A . n A 1 53 SER 53 53 53 SER SER A . n A 1 54 LYS 54 54 54 LYS LYS A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 ASN 57 57 57 ASN ASN A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 LYS 59 59 59 LYS LYS A . n A 1 60 LYS 60 60 60 LYS LYS A . n A 1 61 GLY 61 61 61 GLY GLY A . n A 1 62 THR 62 62 62 THR THR A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 LYS 64 64 64 LYS LYS A . n A 1 65 HIS 65 65 65 HIS HIS A . n A 1 66 TYR 66 66 66 TYR TYR A . n A 1 67 HIS 67 67 67 HIS HIS A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 HIS 69 69 69 HIS HIS A . n A 1 70 THR 70 70 70 THR THR A . n A 1 71 ASN 71 71 71 ASN ASN A . n A 1 72 ALA 72 72 72 ALA ALA A . n A 1 73 GLU 73 73 73 GLU GLU A . n A 1 74 ASN 74 74 74 ASN ASN A . n A 1 75 LYS 75 75 75 LYS LYS A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 TYR 77 77 77 TYR TYR A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 ALA 79 79 79 ALA ALA A . n A 1 80 GLU 80 80 80 GLU GLU A . n A 1 81 ASN 81 81 81 ASN ASN A . n A 1 82 TYR 82 82 82 TYR TYR A . n A 1 83 CYS 83 83 83 CYS CYS A . n A 1 84 PHE 84 84 84 PHE PHE A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 SER 86 86 86 SER SER A . n A 1 87 ILE 87 87 87 ILE ILE A . n A 1 88 PRO 88 88 88 PRO PRO A . n A 1 89 LYS 89 89 89 LYS LYS A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 ILE 91 91 91 ILE ILE A . n A 1 92 HIS 92 92 92 HIS HIS A . n A 1 93 TYR 93 93 93 TYR TYR A . n A 1 94 HIS 94 94 94 HIS HIS A . n A 1 95 GLN 95 95 95 GLN GLN A . n A 1 96 HIS 96 96 96 HIS HIS A . n A 1 97 ASN 97 97 97 ASN ASN A . n A 1 98 SER 98 98 98 SER SER A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 GLY 100 100 100 GLY GLY A . n A 1 101 MET 101 101 101 MET MET A . n A 1 102 ILE 102 102 102 ILE ILE A . n A 1 103 THR 103 103 103 THR THR A . n A 1 104 ARG 104 104 104 ARG ARG A . n A 1 105 LEU 105 105 105 LEU LEU A . n A 1 106 ARG 106 106 106 ARG ARG A . n A 1 107 HIS 107 107 107 HIS HIS A . n A 1 108 PRO 108 108 108 PRO PRO A . n A 1 109 VAL 109 109 109 VAL VAL A . n A 1 110 SER 110 110 110 SER SER A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-10-02 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_nmr_spectrometer 4 3 'Structure model' pdbx_struct_assembly 5 3 'Structure model' pdbx_struct_oper_list 6 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_software.name' 4 3 'Structure model' '_pdbx_nmr_spectrometer.model' 5 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 2 ? ? 36.08 42.23 2 1 SER A 6 ? ? 38.97 28.06 3 1 TYR A 11 ? ? -46.00 170.29 4 1 PHE A 14 ? ? -61.72 96.82 5 1 ASN A 17 ? ? -57.95 104.58 6 1 ASN A 81 ? ? 73.31 30.23 7 1 SER A 98 ? ? -48.91 173.89 8 1 ALA A 99 ? ? -122.80 -57.34 9 1 THR A 103 ? ? -39.60 150.52 10 2 LEU A 8 ? ? -97.30 35.46 11 2 PHE A 14 ? ? -59.93 100.35 12 2 GLU A 33 ? ? -39.62 115.90 13 2 ALA A 35 ? ? -37.61 146.30 14 2 LYS A 59 ? ? -35.87 -72.22 15 2 GLU A 73 ? ? -86.60 32.68 16 2 ASN A 74 ? ? 39.16 45.59 17 2 ILE A 102 ? ? -51.06 103.60 18 2 THR A 103 ? ? -42.03 162.35 19 2 LEU A 105 ? ? -37.68 116.49 20 2 ARG A 106 ? ? -80.49 -70.50 21 3 ASP A 10 ? ? -102.91 48.78 22 3 ALA A 15 ? ? -102.66 -61.09 23 3 GLU A 33 ? ? -36.55 106.83 24 3 ALA A 35 ? ? -38.93 154.09 25 3 SER A 42 ? ? -93.45 -65.69 26 3 MET A 46 ? ? -65.18 -179.28 27 3 GLU A 73 ? ? -85.22 40.26 28 3 ASN A 74 ? ? 35.85 34.10 29 3 ASN A 81 ? ? 74.48 39.37 30 3 ARG A 104 ? ? -53.77 95.89 31 4 SER A 3 ? ? -49.28 154.21 32 4 TYR A 11 ? ? -44.00 168.26 33 4 PHE A 14 ? ? -57.70 100.67 34 4 SER A 41 ? ? -45.50 152.59 35 4 SER A 42 ? ? -59.48 -74.42 36 4 GLN A 43 ? ? -117.35 55.20 37 4 ASN A 74 ? ? 73.96 37.95 38 4 SER A 98 ? ? -49.80 172.05 39 5 LEU A 8 ? ? -108.80 43.33 40 5 TYR A 11 ? ? -59.71 -178.76 41 5 SER A 41 ? ? -53.79 -177.62 42 5 SER A 42 ? ? -67.44 72.96 43 5 GLN A 43 ? ? 36.32 43.92 44 5 MET A 46 ? ? -51.38 179.37 45 5 ALA A 55 ? ? -55.13 177.20 46 5 LYS A 60 ? ? -123.43 -66.04 47 5 VAL A 68 ? ? -69.04 99.66 48 5 GLU A 73 ? ? -94.29 39.92 49 5 ILE A 102 ? ? -37.61 122.67 50 5 LEU A 105 ? ? -57.55 100.68 51 6 ARG A 20 ? ? -49.99 -19.87 52 6 VAL A 56 ? ? -62.71 85.86 53 6 ASP A 58 ? ? -108.14 71.20 54 6 LYS A 60 ? ? 36.01 41.22 55 6 GLU A 73 ? ? -85.06 38.31 56 6 ASN A 74 ? ? 39.19 30.87 57 6 HIS A 96 ? ? -90.50 -72.70 58 6 SER A 98 ? ? -65.07 -179.79 59 6 THR A 103 ? ? -35.37 131.71 60 6 ARG A 106 ? ? -95.71 -61.96 61 7 TYR A 11 ? ? -50.38 171.19 62 7 ASP A 12 ? ? -101.82 -60.47 63 7 PHE A 14 ? ? -52.59 96.67 64 7 VAL A 44 ? ? -45.03 151.57 65 7 TYR A 77 ? ? -171.28 149.30 66 7 ASN A 81 ? ? 72.41 30.11 67 7 ILE A 102 ? ? -54.97 101.17 68 8 SER A 6 ? ? -107.30 76.28 69 8 ASN A 17 ? ? -55.12 91.30 70 8 GLN A 25 ? ? -48.71 -71.71 71 8 LYS A 32 ? ? -49.32 97.17 72 8 GLU A 33 ? ? -38.26 141.86 73 8 GLN A 43 ? ? 39.39 41.75 74 8 VAL A 68 ? ? -41.82 100.75 75 8 GLU A 73 ? ? -95.29 33.58 76 8 ASN A 81 ? ? -35.40 -35.67 77 8 HIS A 92 ? ? -36.67 -38.72 78 8 TYR A 93 ? ? -72.95 -72.05 79 8 ASN A 97 ? ? -170.60 142.91 80 8 THR A 103 ? ? -37.41 137.50 81 8 ARG A 106 ? ? -90.35 -63.37 82 9 SER A 6 ? ? -55.57 176.29 83 9 LEU A 8 ? ? -82.71 43.91 84 9 ASP A 12 ? ? -103.37 -63.63 85 9 TRP A 13 ? ? -37.83 -33.83 86 9 PHE A 14 ? ? -58.45 95.41 87 9 GLU A 33 ? ? -46.64 170.86 88 9 GLN A 43 ? ? 36.98 44.21 89 9 VAL A 68 ? ? -34.70 136.57 90 9 GLU A 73 ? ? -92.44 34.55 91 9 GLN A 95 ? ? -38.25 -27.17 92 9 HIS A 96 ? ? -102.96 -70.07 93 9 SER A 98 ? ? -49.04 159.41 94 9 ILE A 102 ? ? -36.48 140.89 95 9 LEU A 105 ? ? -46.52 95.71 96 10 LEU A 8 ? ? 37.48 45.58 97 10 ASP A 12 ? ? -107.16 -60.34 98 10 TRP A 13 ? ? -37.48 -37.16 99 10 PHE A 14 ? ? -53.10 90.91 100 10 GLU A 33 ? ? -57.04 91.99 101 10 GLU A 73 ? ? -84.80 31.10 102 10 MET A 101 ? ? -89.09 49.04 103 11 SER A 2 ? ? 36.73 42.42 104 11 SER A 5 ? ? 39.31 44.82 105 11 TYR A 11 ? ? -55.07 179.45 106 11 LYS A 32 ? ? -50.95 106.29 107 11 SER A 42 ? ? -37.78 153.23 108 11 GLN A 43 ? ? -82.81 42.49 109 11 ASN A 57 ? ? -82.81 39.61 110 11 VAL A 68 ? ? -34.57 101.48 111 11 ASN A 81 ? ? -100.93 40.82 112 11 ILE A 102 ? ? -38.27 118.06 113 11 LEU A 105 ? ? -55.83 95.67 114 12 GLN A 25 ? ? -69.55 -70.26 115 12 LEU A 26 ? ? -34.22 -33.84 116 12 GLU A 33 ? ? -54.74 109.99 117 12 ALA A 35 ? ? -44.68 155.65 118 12 ALA A 55 ? ? -160.84 115.76 119 12 VAL A 56 ? ? -36.23 -38.73 120 12 ASP A 58 ? ? -72.87 -70.69 121 12 VAL A 68 ? ? -68.52 99.56 122 12 GLU A 80 ? ? -59.02 176.00 123 12 GLN A 95 ? ? -34.72 -38.25 124 12 ILE A 102 ? ? -35.78 103.20 125 12 THR A 103 ? ? -45.57 152.01 126 12 LEU A 105 ? ? -37.03 114.01 127 13 SER A 2 ? ? -132.18 -58.26 128 13 SER A 3 ? ? -58.25 99.81 129 13 SER A 6 ? ? -35.97 135.10 130 13 TYR A 11 ? ? -43.69 163.39 131 13 PHE A 14 ? ? -64.74 99.23 132 13 ALA A 15 ? ? -109.07 53.16 133 13 SER A 41 ? ? -49.33 157.60 134 13 ASN A 57 ? ? 74.07 50.69 135 13 LYS A 59 ? ? -48.49 176.45 136 13 GLU A 73 ? ? -82.16 39.95 137 13 ASN A 74 ? ? 43.28 28.15 138 13 ASN A 81 ? ? -83.30 41.39 139 13 PRO A 88 ? ? -69.70 0.89 140 13 ARG A 104 ? ? -40.40 160.98 141 13 LEU A 105 ? ? -103.30 76.39 142 14 TYR A 11 ? ? -61.28 -176.76 143 14 ARG A 20 ? ? -39.02 -37.75 144 14 GLU A 33 ? ? -38.09 108.37 145 14 ASP A 58 ? ? -48.57 107.80 146 14 ASN A 81 ? ? -36.72 -38.54 147 14 PRO A 88 ? ? -69.80 0.91 148 14 HIS A 92 ? ? -39.23 -28.86 149 14 HIS A 96 ? ? -106.33 -72.40 150 14 MET A 101 ? ? -92.75 53.39 151 14 THR A 103 ? ? -48.79 152.75 152 14 ARG A 106 ? ? -90.03 -64.25 153 15 SER A 2 ? ? -130.09 -45.96 154 15 SER A 5 ? ? -104.10 47.28 155 15 LEU A 8 ? ? 43.26 28.17 156 15 PHE A 14 ? ? -45.13 95.58 157 15 ASN A 17 ? ? -59.51 100.04 158 15 ARG A 20 ? ? -36.14 -31.85 159 15 ARG A 28 ? ? -39.51 -36.54 160 15 SER A 41 ? ? -46.19 158.51 161 15 GLU A 73 ? ? -86.68 36.83 162 15 ASN A 74 ? ? 38.98 48.02 163 15 HIS A 96 ? ? -100.66 -66.46 164 15 THR A 103 ? ? -35.94 135.92 165 15 ARG A 104 ? ? -56.51 101.13 166 15 LEU A 105 ? ? -34.93 100.66 167 15 ARG A 106 ? ? -60.96 -74.30 168 16 TYR A 11 ? ? -51.17 170.02 169 16 ASP A 12 ? ? -96.38 -61.06 170 16 PHE A 14 ? ? -51.17 96.85 171 16 VAL A 44 ? ? 36.69 31.13 172 16 TYR A 93 ? ? -91.01 -64.77 173 16 GLN A 95 ? ? -34.95 -38.98 174 16 SER A 98 ? ? -50.46 174.45 175 16 ALA A 99 ? ? -114.16 -70.30 176 16 ILE A 102 ? ? -34.93 115.67 177 16 ARG A 104 ? ? -49.29 163.15 178 16 ARG A 106 ? ? -105.95 -71.59 179 17 LEU A 8 ? ? -132.86 -43.98 180 17 GLU A 33 ? ? -37.45 105.66 181 17 ALA A 35 ? ? -40.97 159.63 182 17 LYS A 60 ? ? 38.43 32.97 183 17 GLU A 73 ? ? -90.63 33.22 184 17 SER A 98 ? ? -57.86 173.41 185 17 ILE A 102 ? ? -49.01 92.64 186 17 THR A 103 ? ? -37.51 130.27 187 17 ARG A 106 ? ? -93.36 -65.56 188 18 PHE A 14 ? ? -63.77 93.47 189 18 GLU A 33 ? ? -45.61 153.57 190 18 VAL A 44 ? ? -41.94 102.81 191 18 LYS A 60 ? ? -105.39 69.75 192 18 GLU A 73 ? ? -92.79 31.81 193 18 HIS A 92 ? ? -36.39 -38.56 194 18 HIS A 96 ? ? -93.13 -68.73 195 18 THR A 103 ? ? -35.94 147.23 196 18 LEU A 105 ? ? -44.89 103.48 197 19 TYR A 11 ? ? -52.42 -177.15 198 19 SER A 41 ? ? -52.94 -176.15 199 19 SER A 42 ? ? -37.74 153.78 200 19 MET A 46 ? ? -50.75 178.80 201 19 VAL A 68 ? ? -37.44 139.56 202 19 GLU A 73 ? ? -81.98 40.56 203 19 SER A 98 ? ? -51.88 177.74 204 19 ALA A 99 ? ? -100.77 -61.98 205 20 ALA A 15 ? ? -91.47 -65.64 206 20 SER A 23 ? ? -34.47 -38.95 207 20 GLU A 33 ? ? -58.47 81.90 208 20 SER A 41 ? ? -68.40 -174.89 209 20 SER A 42 ? ? -130.47 -54.62 210 20 ASP A 58 ? ? -35.97 109.35 211 20 LYS A 60 ? ? 36.56 36.34 212 20 GLU A 73 ? ? -85.11 35.07 213 20 ASN A 74 ? ? 38.19 42.75 214 20 TYR A 77 ? ? -172.12 137.78 215 20 GLN A 95 ? ? -39.09 -37.26 216 20 HIS A 96 ? ? -92.61 -71.95 217 20 LEU A 105 ? ? -42.82 105.49 218 20 ARG A 106 ? ? -75.79 -72.42 #