data_2EPD # _entry.id 2EPD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2EPD pdb_00002epd 10.2210/pdb2epd/pdb RCSB RCSB026942 ? ? WWPDB D_1000026942 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2EPD _pdbx_database_status.recvd_initial_deposition_date 2007-03-29 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tanabe, W.' 1 'Tsuda, K.' 2 'Muto, Y.' 3 'Inoue, M.' 4 'Kigawa, T.' 5 'Terada, T.' 6 'Shirouzu, M.' 7 'Yokoyama, S.' 8 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 9 # _citation.id primary _citation.title 'Solution structure of SH3 domain in Rho-GTPase-activating protein 4' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tanabe, W.' 1 ? primary 'Tsuda, K.' 2 ? primary 'Muto, Y.' 3 ? primary 'Inoue, M.' 4 ? primary 'Kigawa, T.' 5 ? primary 'Terada, T.' 6 ? primary 'Shirouzu, M.' 7 ? primary 'Yokoyama, S.' 8 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Rho GTPase-activating protein 4' _entity.formula_weight 8171.088 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'SH3 domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Rho-GAP hematopoietic protein C1, p115' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GSSGSSGEGVVEAVACFAYTGRTAQELSFRRGDVLRLHERASSDWWRGEHNGMRGLIPHKYITLPAGTEKQVVGAG _entity_poly.pdbx_seq_one_letter_code_can GSSGSSGEGVVEAVACFAYTGRTAQELSFRRGDVLRLHERASSDWWRGEHNGMRGLIPHKYITLPAGTEKQVVGAG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 GLU n 1 9 GLY n 1 10 VAL n 1 11 VAL n 1 12 GLU n 1 13 ALA n 1 14 VAL n 1 15 ALA n 1 16 CYS n 1 17 PHE n 1 18 ALA n 1 19 TYR n 1 20 THR n 1 21 GLY n 1 22 ARG n 1 23 THR n 1 24 ALA n 1 25 GLN n 1 26 GLU n 1 27 LEU n 1 28 SER n 1 29 PHE n 1 30 ARG n 1 31 ARG n 1 32 GLY n 1 33 ASP n 1 34 VAL n 1 35 LEU n 1 36 ARG n 1 37 LEU n 1 38 HIS n 1 39 GLU n 1 40 ARG n 1 41 ALA n 1 42 SER n 1 43 SER n 1 44 ASP n 1 45 TRP n 1 46 TRP n 1 47 ARG n 1 48 GLY n 1 49 GLU n 1 50 HIS n 1 51 ASN n 1 52 GLY n 1 53 MET n 1 54 ARG n 1 55 GLY n 1 56 LEU n 1 57 ILE n 1 58 PRO n 1 59 HIS n 1 60 LYS n 1 61 TYR n 1 62 ILE n 1 63 THR n 1 64 LEU n 1 65 PRO n 1 66 ALA n 1 67 GLY n 1 68 THR n 1 69 GLU n 1 70 LYS n 1 71 GLN n 1 72 VAL n 1 73 VAL n 1 74 GLY n 1 75 ALA n 1 76 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'ARHGAP4, KIAA0131, RGC1, RHOGAP4' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P060130-05 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RHG04_HUMAN _struct_ref.pdbx_db_accession P98171 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code EGVVEAVACFAYTGRTAQELSFRRGDVLRLHERASSDWWRGEHNGMRGLIPHKYITLPAGTEKQVVGAG _struct_ref.pdbx_align_begin 746 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2EPD _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 76 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P98171 _struct_ref_seq.db_align_beg 746 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 814 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 746 _struct_ref_seq.pdbx_auth_seq_align_end 814 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2EPD GLY A 1 ? UNP P98171 ? ? 'expression tag' 739 1 1 2EPD SER A 2 ? UNP P98171 ? ? 'expression tag' 740 2 1 2EPD SER A 3 ? UNP P98171 ? ? 'expression tag' 741 3 1 2EPD GLY A 4 ? UNP P98171 ? ? 'expression tag' 742 4 1 2EPD SER A 5 ? UNP P98171 ? ? 'expression tag' 743 5 1 2EPD SER A 6 ? UNP P98171 ? ? 'expression tag' 744 6 1 2EPD GLY A 7 ? UNP P98171 ? ? 'expression tag' 745 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.14mM 13C-15N PROTEIN, 20mM d-Tris-HCl (pH7.0), 100mM NaCl, 1mM d-DTT, 0.02% NaN3, 0.05mM ZnCl2, 1mM IDA; 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2EPD _pdbx_nmr_refine.method 'torsion angle dyanamics, simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2EPD _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations, structures with the lowest energy, target function' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2EPD _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20060702 Delaglio,F. 2 'data analysis' NMRView 5.0.4 Johnson,B.A. 3 'data analysis' KUJIRA 0.9820 Kobayashi,N. 4 'structure solution' CYANA 2.0.17 Guntert,P. 5 refinement CYANA 2.0.17 Guntert,P. 6 # _exptl.entry_id 2EPD _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2EPD _struct.title 'Solution structure of SH3 domain in Rho-GTPase-activating protein 4' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2EPD _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text ;SH3 domain, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, PROTEIN BINDING ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 MET A 53 ? PRO A 58 ? MET A 791 PRO A 796 A 2 TRP A 45 ? HIS A 50 ? TRP A 783 HIS A 788 A 3 VAL A 34 ? SER A 42 ? VAL A 772 SER A 780 A 4 VAL A 11 ? ALA A 15 ? VAL A 749 ALA A 753 A 5 ILE A 62 ? THR A 63 ? ILE A 800 THR A 801 B 1 TYR A 19 ? THR A 20 ? TYR A 757 THR A 758 B 2 SER A 28 ? PHE A 29 ? SER A 766 PHE A 767 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLY A 55 ? O GLY A 793 N GLY A 48 ? N GLY A 786 A 2 3 O ARG A 47 ? O ARG A 785 N HIS A 38 ? N HIS A 776 A 3 4 O LEU A 37 ? O LEU A 775 N VAL A 11 ? N VAL A 749 A 4 5 N VAL A 14 ? N VAL A 752 O THR A 63 ? O THR A 801 B 1 2 N TYR A 19 ? N TYR A 757 O PHE A 29 ? O PHE A 767 # _database_PDB_matrix.entry_id 2EPD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2EPD _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 739 739 GLY GLY A . n A 1 2 SER 2 740 740 SER SER A . n A 1 3 SER 3 741 741 SER SER A . n A 1 4 GLY 4 742 742 GLY GLY A . n A 1 5 SER 5 743 743 SER SER A . n A 1 6 SER 6 744 744 SER SER A . n A 1 7 GLY 7 745 745 GLY GLY A . n A 1 8 GLU 8 746 746 GLU GLU A . n A 1 9 GLY 9 747 747 GLY GLY A . n A 1 10 VAL 10 748 748 VAL VAL A . n A 1 11 VAL 11 749 749 VAL VAL A . n A 1 12 GLU 12 750 750 GLU GLU A . n A 1 13 ALA 13 751 751 ALA ALA A . n A 1 14 VAL 14 752 752 VAL VAL A . n A 1 15 ALA 15 753 753 ALA ALA A . n A 1 16 CYS 16 754 754 CYS CYS A . n A 1 17 PHE 17 755 755 PHE PHE A . n A 1 18 ALA 18 756 756 ALA ALA A . n A 1 19 TYR 19 757 757 TYR TYR A . n A 1 20 THR 20 758 758 THR THR A . n A 1 21 GLY 21 759 759 GLY GLY A . n A 1 22 ARG 22 760 760 ARG ARG A . n A 1 23 THR 23 761 761 THR THR A . n A 1 24 ALA 24 762 762 ALA ALA A . n A 1 25 GLN 25 763 763 GLN GLN A . n A 1 26 GLU 26 764 764 GLU GLU A . n A 1 27 LEU 27 765 765 LEU LEU A . n A 1 28 SER 28 766 766 SER SER A . n A 1 29 PHE 29 767 767 PHE PHE A . n A 1 30 ARG 30 768 768 ARG ARG A . n A 1 31 ARG 31 769 769 ARG ARG A . n A 1 32 GLY 32 770 770 GLY GLY A . n A 1 33 ASP 33 771 771 ASP ASP A . n A 1 34 VAL 34 772 772 VAL VAL A . n A 1 35 LEU 35 773 773 LEU LEU A . n A 1 36 ARG 36 774 774 ARG ARG A . n A 1 37 LEU 37 775 775 LEU LEU A . n A 1 38 HIS 38 776 776 HIS HIS A . n A 1 39 GLU 39 777 777 GLU GLU A . n A 1 40 ARG 40 778 778 ARG ARG A . n A 1 41 ALA 41 779 779 ALA ALA A . n A 1 42 SER 42 780 780 SER SER A . n A 1 43 SER 43 781 781 SER SER A . n A 1 44 ASP 44 782 782 ASP ASP A . n A 1 45 TRP 45 783 783 TRP TRP A . n A 1 46 TRP 46 784 784 TRP TRP A . n A 1 47 ARG 47 785 785 ARG ARG A . n A 1 48 GLY 48 786 786 GLY GLY A . n A 1 49 GLU 49 787 787 GLU GLU A . n A 1 50 HIS 50 788 788 HIS HIS A . n A 1 51 ASN 51 789 789 ASN ASN A . n A 1 52 GLY 52 790 790 GLY GLY A . n A 1 53 MET 53 791 791 MET MET A . n A 1 54 ARG 54 792 792 ARG ARG A . n A 1 55 GLY 55 793 793 GLY GLY A . n A 1 56 LEU 56 794 794 LEU LEU A . n A 1 57 ILE 57 795 795 ILE ILE A . n A 1 58 PRO 58 796 796 PRO PRO A . n A 1 59 HIS 59 797 797 HIS HIS A . n A 1 60 LYS 60 798 798 LYS LYS A . n A 1 61 TYR 61 799 799 TYR TYR A . n A 1 62 ILE 62 800 800 ILE ILE A . n A 1 63 THR 63 801 801 THR THR A . n A 1 64 LEU 64 802 802 LEU LEU A . n A 1 65 PRO 65 803 803 PRO PRO A . n A 1 66 ALA 66 804 804 ALA ALA A . n A 1 67 GLY 67 805 805 GLY GLY A . n A 1 68 THR 68 806 806 THR THR A . n A 1 69 GLU 69 807 807 GLU GLU A . n A 1 70 LYS 70 808 808 LYS LYS A . n A 1 71 GLN 71 809 809 GLN GLN A . n A 1 72 VAL 72 810 810 VAL VAL A . n A 1 73 VAL 73 811 811 VAL VAL A . n A 1 74 GLY 74 812 812 GLY GLY A . n A 1 75 ALA 75 813 813 ALA ALA A . n A 1 76 GLY 76 814 814 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-10-02 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_nmr_spectrometer 4 3 'Structure model' pdbx_struct_assembly 5 3 'Structure model' pdbx_struct_oper_list 6 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_software.name' 4 3 'Structure model' '_pdbx_nmr_spectrometer.model' 5 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 740 ? ? 70.95 43.02 2 1 ARG A 769 ? ? -35.14 129.78 3 1 ARG A 778 ? ? -38.99 141.94 4 1 ASN A 789 ? ? -57.92 99.33 5 1 ALA A 804 ? ? -47.90 109.78 6 1 THR A 806 ? ? -45.67 171.02 7 1 ALA A 813 ? ? -168.00 116.82 8 2 SER A 744 ? ? -108.16 44.10 9 2 ASN A 789 ? ? -68.92 71.35 10 2 ALA A 813 ? ? -34.52 119.93 11 3 GLU A 746 ? ? -106.06 40.43 12 3 ASN A 789 ? ? -66.80 72.14 13 3 VAL A 811 ? ? -37.79 -31.41 14 4 SER A 741 ? ? -36.90 116.72 15 4 ARG A 769 ? ? -39.43 134.14 16 4 ASN A 789 ? ? -66.93 76.33 17 4 VAL A 810 ? ? -53.59 105.58 18 5 GLU A 746 ? ? -48.19 157.83 19 5 ASN A 789 ? ? -57.88 98.68 20 5 ALA A 804 ? ? -35.72 -37.23 21 6 SER A 743 ? ? -89.20 42.36 22 6 ARG A 769 ? ? -37.37 128.21 23 6 ASN A 789 ? ? -67.13 73.38 24 6 TYR A 799 ? ? -90.72 42.72 25 6 ALA A 804 ? ? -34.82 137.38 26 7 SER A 743 ? ? -98.25 42.15 27 7 GLU A 746 ? ? -41.73 162.40 28 7 ASN A 789 ? ? -52.92 92.50 29 7 ALA A 804 ? ? -35.90 119.77 30 7 THR A 806 ? ? -96.73 40.62 31 8 GLU A 746 ? ? -88.47 37.57 32 8 ARG A 769 ? ? -35.16 124.85 33 8 ASN A 789 ? ? -55.30 95.85 34 9 ARG A 769 ? ? -39.71 127.66 35 9 ASN A 789 ? ? -66.93 73.64 36 9 TYR A 799 ? ? -90.31 37.21 37 9 ALA A 804 ? ? -63.82 95.47 38 9 THR A 806 ? ? -78.25 45.61 39 9 GLU A 807 ? ? 35.69 42.85 40 9 VAL A 810 ? ? -48.89 153.94 41 10 ARG A 769 ? ? -34.32 126.58 42 10 ASN A 789 ? ? -53.48 93.93 43 10 TYR A 799 ? ? -92.08 32.53 44 10 ALA A 804 ? ? -37.43 143.15 45 10 VAL A 811 ? ? -88.71 39.60 46 11 SER A 744 ? ? -98.96 42.36 47 11 ASN A 789 ? ? -57.57 98.43 48 11 THR A 806 ? ? -62.37 96.76 49 11 LYS A 808 ? ? -101.11 40.62 50 12 ASN A 789 ? ? -52.38 93.75 51 12 TYR A 799 ? ? -93.49 36.78 52 12 ALA A 804 ? ? -57.82 92.18 53 13 ARG A 769 ? ? -34.42 126.14 54 13 ARG A 778 ? ? -53.35 104.69 55 13 ASN A 789 ? ? -52.09 93.31 56 14 SER A 743 ? ? -38.93 132.86 57 14 ASN A 789 ? ? -65.95 72.33 58 14 ALA A 804 ? ? -36.88 131.93 59 14 LYS A 808 ? ? -84.03 42.92 60 15 SER A 741 ? ? -68.65 89.19 61 15 ASN A 789 ? ? -55.48 95.90 62 15 GLU A 807 ? ? 37.01 32.66 63 16 GLU A 746 ? ? -161.17 115.22 64 16 ARG A 769 ? ? -36.43 125.86 65 16 ASN A 789 ? ? -52.90 96.32 66 16 ALA A 804 ? ? -38.34 157.97 67 16 GLU A 807 ? ? -132.15 -39.12 68 17 GLU A 746 ? ? 34.24 33.30 69 17 ASN A 789 ? ? -68.10 70.83 70 17 ALA A 804 ? ? -34.08 147.53 71 17 THR A 806 ? ? 36.76 35.68 72 17 GLU A 807 ? ? -48.70 159.69 73 17 LYS A 808 ? ? -171.79 148.30 74 18 ASN A 789 ? ? -66.19 72.30 75 18 TYR A 799 ? ? -95.77 42.62 76 18 LEU A 802 ? ? -43.64 154.67 77 19 ASN A 789 ? ? -54.05 95.24 78 19 PRO A 803 ? ? -69.82 -176.28 79 19 THR A 806 ? ? -38.73 137.47 80 19 GLU A 807 ? ? -57.12 106.62 81 19 GLN A 809 ? ? -85.14 48.74 82 20 SER A 740 ? ? -105.37 43.29 83 20 SER A 741 ? ? -81.15 43.44 84 20 ARG A 769 ? ? -34.45 129.05 85 20 ASN A 789 ? ? -56.68 98.39 86 20 ALA A 804 ? ? -175.56 -175.01 #