data_2ETJ # _entry.id 2ETJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2ETJ pdb_00002etj 10.2210/pdb2etj/pdb RCSB RCSB035073 ? ? WWPDB D_1000035073 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 282784 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 2ETJ _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2005-10-27 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of Ribonuclease HII (EC 3.1.26.4) (RNase HII) (tm0915) from THERMOTOGA MARITIMA at 1.74 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.length_a 51.821 _cell.length_b 51.821 _cell.length_c 76.293 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 2ETJ _cell.pdbx_unique_axis ? _cell.Z_PDB 3 # _symmetry.Int_Tables_number 144 _symmetry.space_group_name_H-M 'P 31' _symmetry.entry_id 2ETJ _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ribonuclease HII' 28414.020 1 3.1.26.4 ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 5 ? ? ? ? 5 water nat water 18.015 161 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'RNase HII' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)GSDKIHHHHHH(MSE)GIDELYKKEFGIVAGVDEAGRGCLAGPVVAAAVVLEKEIEGINDSKQLSPAKRERLLDE I(MSE)EKAAVGIGIASPEEIDLYNIFNATKLA(MSE)NRALENLSVKPSFVLVDGKGIELSVPGTCLVKGDQKSKLIGA ASIVAKVFRDRL(MSE)SEFHR(MSE)YPQFSFHKHKGYATKEHLNEIRKNGVLPIHRLSFEPVLELLTDDLLREFFEKG LISENRFERILNLLGARKSVVFRKERTNHNLPLF ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSDKIHHHHHHMGIDELYKKEFGIVAGVDEAGRGCLAGPVVAAAVVLEKEIEGINDSKQLSPAKRERLLDEIMEKAAVG IGIASPEEIDLYNIFNATKLAMNRALENLSVKPSFVLVDGKGIELSVPGTCLVKGDQKSKLIGAASIVAKVFRDRLMSEF HRMYPQFSFHKHKGYATKEHLNEIRKNGVLPIHRLSFEPVLELLTDDLLREFFEKGLISENRFERILNLLGARKSVVFRK ERTNHNLPLF ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 282784 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLY n 1 3 SER n 1 4 ASP n 1 5 LYS n 1 6 ILE n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 HIS n 1 12 HIS n 1 13 MSE n 1 14 GLY n 1 15 ILE n 1 16 ASP n 1 17 GLU n 1 18 LEU n 1 19 TYR n 1 20 LYS n 1 21 LYS n 1 22 GLU n 1 23 PHE n 1 24 GLY n 1 25 ILE n 1 26 VAL n 1 27 ALA n 1 28 GLY n 1 29 VAL n 1 30 ASP n 1 31 GLU n 1 32 ALA n 1 33 GLY n 1 34 ARG n 1 35 GLY n 1 36 CYS n 1 37 LEU n 1 38 ALA n 1 39 GLY n 1 40 PRO n 1 41 VAL n 1 42 VAL n 1 43 ALA n 1 44 ALA n 1 45 ALA n 1 46 VAL n 1 47 VAL n 1 48 LEU n 1 49 GLU n 1 50 LYS n 1 51 GLU n 1 52 ILE n 1 53 GLU n 1 54 GLY n 1 55 ILE n 1 56 ASN n 1 57 ASP n 1 58 SER n 1 59 LYS n 1 60 GLN n 1 61 LEU n 1 62 SER n 1 63 PRO n 1 64 ALA n 1 65 LYS n 1 66 ARG n 1 67 GLU n 1 68 ARG n 1 69 LEU n 1 70 LEU n 1 71 ASP n 1 72 GLU n 1 73 ILE n 1 74 MSE n 1 75 GLU n 1 76 LYS n 1 77 ALA n 1 78 ALA n 1 79 VAL n 1 80 GLY n 1 81 ILE n 1 82 GLY n 1 83 ILE n 1 84 ALA n 1 85 SER n 1 86 PRO n 1 87 GLU n 1 88 GLU n 1 89 ILE n 1 90 ASP n 1 91 LEU n 1 92 TYR n 1 93 ASN n 1 94 ILE n 1 95 PHE n 1 96 ASN n 1 97 ALA n 1 98 THR n 1 99 LYS n 1 100 LEU n 1 101 ALA n 1 102 MSE n 1 103 ASN n 1 104 ARG n 1 105 ALA n 1 106 LEU n 1 107 GLU n 1 108 ASN n 1 109 LEU n 1 110 SER n 1 111 VAL n 1 112 LYS n 1 113 PRO n 1 114 SER n 1 115 PHE n 1 116 VAL n 1 117 LEU n 1 118 VAL n 1 119 ASP n 1 120 GLY n 1 121 LYS n 1 122 GLY n 1 123 ILE n 1 124 GLU n 1 125 LEU n 1 126 SER n 1 127 VAL n 1 128 PRO n 1 129 GLY n 1 130 THR n 1 131 CYS n 1 132 LEU n 1 133 VAL n 1 134 LYS n 1 135 GLY n 1 136 ASP n 1 137 GLN n 1 138 LYS n 1 139 SER n 1 140 LYS n 1 141 LEU n 1 142 ILE n 1 143 GLY n 1 144 ALA n 1 145 ALA n 1 146 SER n 1 147 ILE n 1 148 VAL n 1 149 ALA n 1 150 LYS n 1 151 VAL n 1 152 PHE n 1 153 ARG n 1 154 ASP n 1 155 ARG n 1 156 LEU n 1 157 MSE n 1 158 SER n 1 159 GLU n 1 160 PHE n 1 161 HIS n 1 162 ARG n 1 163 MSE n 1 164 TYR n 1 165 PRO n 1 166 GLN n 1 167 PHE n 1 168 SER n 1 169 PHE n 1 170 HIS n 1 171 LYS n 1 172 HIS n 1 173 LYS n 1 174 GLY n 1 175 TYR n 1 176 ALA n 1 177 THR n 1 178 LYS n 1 179 GLU n 1 180 HIS n 1 181 LEU n 1 182 ASN n 1 183 GLU n 1 184 ILE n 1 185 ARG n 1 186 LYS n 1 187 ASN n 1 188 GLY n 1 189 VAL n 1 190 LEU n 1 191 PRO n 1 192 ILE n 1 193 HIS n 1 194 ARG n 1 195 LEU n 1 196 SER n 1 197 PHE n 1 198 GLU n 1 199 PRO n 1 200 VAL n 1 201 LEU n 1 202 GLU n 1 203 LEU n 1 204 LEU n 1 205 THR n 1 206 ASP n 1 207 ASP n 1 208 LEU n 1 209 LEU n 1 210 ARG n 1 211 GLU n 1 212 PHE n 1 213 PHE n 1 214 GLU n 1 215 LYS n 1 216 GLY n 1 217 LEU n 1 218 ILE n 1 219 SER n 1 220 GLU n 1 221 ASN n 1 222 ARG n 1 223 PHE n 1 224 GLU n 1 225 ARG n 1 226 ILE n 1 227 LEU n 1 228 ASN n 1 229 LEU n 1 230 LEU n 1 231 GLY n 1 232 ALA n 1 233 ARG n 1 234 LYS n 1 235 SER n 1 236 VAL n 1 237 VAL n 1 238 PHE n 1 239 ARG n 1 240 LYS n 1 241 GLU n 1 242 ARG n 1 243 THR n 1 244 ASN n 1 245 HIS n 1 246 ASN n 1 247 LEU n 1 248 PRO n 1 249 LEU n 1 250 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Thermotoga _entity_src_gen.pdbx_gene_src_gene rnhB _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermotoga maritima' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2336 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name HK100 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RNH2_THEMA _struct_ref.pdbx_db_accession Q9X017 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MGIDELYKKEFGIVAGVDEAGRGCLAGPVVAAAVVLEKEIEGINDSKQLSPAKRERLLDEIMEKAAVGIGIASPEEIDLY NIFNATKLAMNRALENLSVKPSFVLVDGKGIELSVPGTCLVKGDQKSKLIGAASIVAKVFRDRLMSEFHRMYPQFSFHKH KGYATKEHLNEIRKNGVLPIHRLSFEPVLELLTDDLLREFFEKGLISENRFERILNLLGARKSVVFRKERTNHNLPLF ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2ETJ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 13 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 250 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9X017 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 238 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 238 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2ETJ MSE A 1 ? UNP Q9X017 ? ? 'expression tag' -11 1 1 2ETJ GLY A 2 ? UNP Q9X017 ? ? 'expression tag' -10 2 1 2ETJ SER A 3 ? UNP Q9X017 ? ? 'expression tag' -9 3 1 2ETJ ASP A 4 ? UNP Q9X017 ? ? 'expression tag' -8 4 1 2ETJ LYS A 5 ? UNP Q9X017 ? ? 'expression tag' -7 5 1 2ETJ ILE A 6 ? UNP Q9X017 ? ? 'expression tag' -6 6 1 2ETJ HIS A 7 ? UNP Q9X017 ? ? 'expression tag' -5 7 1 2ETJ HIS A 8 ? UNP Q9X017 ? ? 'expression tag' -4 8 1 2ETJ HIS A 9 ? UNP Q9X017 ? ? 'expression tag' -3 9 1 2ETJ HIS A 10 ? UNP Q9X017 ? ? 'expression tag' -2 10 1 2ETJ HIS A 11 ? UNP Q9X017 ? ? 'expression tag' -1 11 1 2ETJ HIS A 12 ? UNP Q9X017 ? ? 'expression tag' 0 12 1 2ETJ MSE A 13 ? UNP Q9X017 MET 1 'modified residue' 1 13 1 2ETJ MSE A 74 ? UNP Q9X017 MET 62 'modified residue' 62 14 1 2ETJ MSE A 102 ? UNP Q9X017 MET 90 'modified residue' 90 15 1 2ETJ MSE A 157 ? UNP Q9X017 MET 145 'modified residue' 145 16 1 2ETJ MSE A 163 ? UNP Q9X017 MET 151 'modified residue' 151 17 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 2ETJ # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 40.89 _exptl_crystal.density_Matthews 2.08 _exptl_crystal.description ? _exptl_crystal.density_meas ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION,SITTING DROP,NANODROP' _exptl_crystal_grow.pH 5.8 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '0.2M MgCl2, 20.0% PEG-3350, No Buffer , pH 5.8, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.details ? _diffrn_detector.pdbx_collection_date 2005-09-29 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9797 1.0 2 1.0000 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline 8.2.1 _diffrn_source.type 'ALS BEAMLINE 8.2.1' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.9797, 1.0000' _diffrn_source.pdbx_synchrotron_site ALS # _reflns.entry_id 2ETJ _reflns.d_resolution_low 18.15 _reflns.d_resolution_high 1.74 _reflns.number_obs 23391 _reflns.percent_possible_obs 99.400 _reflns.pdbx_Rmerge_I_obs 0.069 _reflns.pdbx_chi_squared ? _reflns.pdbx_redundancy 2.800 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_netI_over_sigmaI 7.100 _reflns.pdbx_Rsym_value 0.069 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_low _reflns_shell.d_res_high _reflns_shell.number_measured_obs _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.number_unique_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.percent_possible_all _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.79 1.74 1740 99.500 0.469 ? 2.800 ? 1.500 0.469 ? ? ? 1 1 1.83 1.79 1678 99.800 0.394 ? 2.800 ? 1.800 0.394 ? ? ? 2 1 1.89 1.83 1614 99.400 0.372 ? 2.800 ? 1.900 0.372 ? ? ? 3 1 1.95 1.89 1609 99.500 0.228 ? 2.800 ? 3.000 0.228 ? ? ? 4 1 2.01 1.95 1583 99.600 0.185 ? 2.800 ? 3.800 0.185 ? ? ? 5 1 2.08 2.01 1470 99.500 0.146 ? 2.800 ? 4.400 0.146 ? ? ? 6 1 2.16 2.08 1439 99.700 0.125 ? 2.800 ? 5.500 0.125 ? ? ? 7 1 2.25 2.16 1419 99.500 0.113 ? 2.800 ? 5.900 0.113 ? ? ? 8 1 2.35 2.25 1311 99.700 0.106 ? 2.800 ? 6.500 0.106 ? ? ? 9 1 2.46 2.35 1265 99.500 0.081 ? 2.800 ? 8.700 0.081 ? ? ? 10 1 2.59 2.46 1231 99.800 0.075 ? 2.800 ? 9.200 0.075 ? ? ? 11 1 2.75 2.59 1130 99.700 0.069 ? 2.800 ? 9.600 0.069 ? ? ? 12 1 2.94 2.75 1077 99.900 0.063 ? 2.800 ? 10.500 0.063 ? ? ? 13 1 3.18 2.94 1005 99.900 0.056 ? 2.800 ? 11.900 0.056 ? ? ? 14 1 3.48 3.18 931 99.700 0.053 ? 2.800 ? 11.800 0.053 ? ? ? 15 1 3.89 3.48 828 99.800 0.05 ? 2.800 ? 12.900 0.05 ? ? ? 16 1 4.49 3.89 729 99.700 0.045 ? 2.800 ? 14.100 0.045 ? ? ? 17 1 5.50 4.49 624 99.500 0.047 ? 2.700 ? 13.000 0.047 ? ? ? 18 1 7.78 5.50 483 98.600 0.052 ? 2.700 ? 12.300 0.052 ? ? ? 19 1 18.15 7.78 225 85.100 0.048 ? 2.500 ? 14.000 0.048 ? ? ? 20 1 # _refine.ls_d_res_high 1.740 _refine.ls_d_res_low 18.150 _refine.ls_percent_reflns_obs 99.430 _refine.ls_number_reflns_obs 22167 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.ls_R_factor_all 0.182 _refine.ls_R_factor_R_work 0.179 _refine.ls_R_factor_R_free 0.219 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1194 _refine.B_iso_mean 20.215 _refine.aniso_B[1][1] 0.000 _refine.aniso_B[2][2] 0.000 _refine.aniso_B[3][3] 0.000 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.960 _refine.correlation_coeff_Fo_to_Fc_free 0.948 _refine.pdbx_overall_ESU_R 0.111 _refine.pdbx_overall_ESU_R_Free 0.111 _refine.overall_SU_ML 0.080 _refine.overall_SU_B 4.952 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_method_to_determine_struct MAD _refine.entry_id 2ETJ _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1614 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 22 _refine_hist.number_atoms_solvent 161 _refine_hist.number_atoms_total 1797 _refine_hist.d_res_high 1.740 _refine_hist.d_res_low 18.150 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1674 0.017 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1176 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2246 1.572 1.987 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 2867 0.959 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 209 6.118 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 69 36.639 23.333 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 303 15.465 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 13 15.538 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 263 0.097 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1818 0.006 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 335 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 360 0.215 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 1269 0.203 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 793 0.175 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 878 0.090 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 104 0.172 0.200 ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 2 0.087 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 14 0.310 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 40 0.263 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 9 0.294 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1092 2.513 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 431 0.608 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1680 3.216 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 656 6.114 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 566 8.167 11.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.740 _refine_ls_shell.d_res_low 1.785 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.310 _refine_ls_shell.number_reflns_R_work 1650 _refine_ls_shell.R_factor_R_work 0.23 _refine_ls_shell.R_factor_R_free 0.31 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 86 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2ETJ _struct.title 'Crystal structure of Ribonuclease HII (EC 3.1.26.4) (RNase HII) (tm0915) from THERMOTOGA MARITIMA at 1.74 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;tm0915, Ribonuclease HII (EC 3.1.26.4) (RNase HII), Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI, HYDROLASE ; _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.entry_id 2ETJ # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 5 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 14 ? LYS A 20 ? GLY A 2 LYS A 8 5 ? 7 HELX_P HELX_P2 2 ALA A 64 ? LYS A 76 ? ALA A 52 LYS A 64 1 ? 13 HELX_P HELX_P3 3 SER A 85 ? ASN A 93 ? SER A 73 ASN A 81 1 ? 9 HELX_P HELX_P4 4 ASN A 93 ? LEU A 109 ? ASN A 81 LEU A 97 1 ? 17 HELX_P HELX_P5 5 LYS A 134 ? SER A 139 ? LYS A 122 SER A 127 1 ? 6 HELX_P HELX_P6 6 SER A 139 ? TYR A 164 ? SER A 127 TYR A 152 1 ? 26 HELX_P HELX_P7 7 SER A 168 ? LYS A 173 ? SER A 156 LYS A 161 1 ? 6 HELX_P HELX_P8 8 THR A 177 ? GLY A 188 ? THR A 165 GLY A 176 1 ? 12 HELX_P HELX_P9 9 PHE A 197 ? GLU A 202 ? PHE A 185 GLU A 190 1 ? 6 HELX_P HELX_P10 10 THR A 205 ? LYS A 215 ? THR A 193 LYS A 203 1 ? 11 HELX_P HELX_P11 11 SER A 219 ? ALA A 232 ? SER A 207 ALA A 220 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 13 C ? ? ? 1_555 A GLY 14 N ? ? A MSE 1 A GLY 2 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale2 covale both ? A ILE 73 C ? ? ? 1_555 A MSE 74 N ? ? A ILE 61 A MSE 62 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale3 covale both ? A MSE 74 C ? ? ? 1_555 A GLU 75 N ? ? A MSE 62 A GLU 63 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale4 covale both ? A ALA 101 C ? ? ? 1_555 A MSE 102 N ? ? A ALA 89 A MSE 90 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale5 covale both ? A MSE 102 C ? ? ? 1_555 A ASN 103 N ? ? A MSE 90 A ASN 91 1_555 ? ? ? ? ? ? ? 1.309 ? ? covale6 covale both ? A LEU 156 C ? ? ? 1_555 A MSE 157 N ? ? A LEU 144 A MSE 145 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale7 covale both ? A MSE 157 C ? ? ? 1_555 A SER 158 N ? ? A MSE 145 A SER 146 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale8 covale both ? A ARG 162 C ? ? ? 1_555 A MSE 163 N ? ? A ARG 150 A MSE 151 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale9 covale both ? A MSE 163 C ? ? ? 1_555 A TYR 164 N ? ? A MSE 151 A TYR 152 1_555 ? ? ? ? ? ? ? 1.327 ? ? metalc1 metalc ? ? A ASP 30 OD1 ? ? ? 1_555 B MG . MG ? ? A ASP 18 A MG 239 1_555 ? ? ? ? ? ? ? 2.119 ? ? metalc2 metalc ? ? A ASP 119 OD2 ? ? ? 1_555 B MG . MG ? ? A ASP 107 A MG 239 1_555 ? ? ? ? ? ? ? 2.005 ? ? metalc3 metalc ? ? B MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 239 A HOH 395 1_555 ? ? ? ? ? ? ? 2.189 ? ? metalc4 metalc ? ? B MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 239 A HOH 396 1_555 ? ? ? ? ? ? ? 2.079 ? ? metalc5 metalc ? ? B MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 239 A HOH 397 1_555 ? ? ? ? ? ? ? 1.884 ? ? metalc6 metalc ? ? B MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 239 A HOH 398 1_555 ? ? ? ? ? ? ? 1.929 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 77 ? ALA A 84 ? ALA A 65 ALA A 72 A 2 VAL A 41 ? LEU A 48 ? VAL A 29 LEU A 36 A 3 VAL A 26 ? ALA A 32 ? VAL A 14 ALA A 20 A 4 PHE A 115 ? ASP A 119 ? PHE A 103 ASP A 107 A 5 GLY A 129 ? LEU A 132 ? GLY A 117 LEU A 120 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLY A 82 ? O GLY A 70 N ALA A 43 ? N ALA A 31 A 2 3 O VAL A 42 ? O VAL A 30 N ALA A 32 ? N ALA A 20 A 3 4 N ALA A 27 ? N ALA A 15 O LEU A 117 ? O LEU A 105 A 4 5 N VAL A 118 ? N VAL A 106 O LEU A 132 ? O LEU A 120 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 239 ? 6 'BINDING SITE FOR RESIDUE MG A 239' AC2 Software A CL 240 ? 3 'BINDING SITE FOR RESIDUE CL A 240' AC3 Software A EDO 241 ? 5 'BINDING SITE FOR RESIDUE EDO A 241' AC4 Software A EDO 242 ? 7 'BINDING SITE FOR RESIDUE EDO A 242' AC5 Software A EDO 243 ? 7 'BINDING SITE FOR RESIDUE EDO A 243' AC6 Software A EDO 244 ? 3 'BINDING SITE FOR RESIDUE EDO A 244' AC7 Software A EDO 245 ? 5 'BINDING SITE FOR RESIDUE EDO A 245' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ASP A 30 ? ASP A 18 . ? 1_555 ? 2 AC1 6 ASP A 119 ? ASP A 107 . ? 1_555 ? 3 AC1 6 HOH I . ? HOH A 395 . ? 1_555 ? 4 AC1 6 HOH I . ? HOH A 396 . ? 1_555 ? 5 AC1 6 HOH I . ? HOH A 397 . ? 1_555 ? 6 AC1 6 HOH I . ? HOH A 398 . ? 1_555 ? 7 AC2 3 ILE A 218 ? ILE A 206 . ? 1_555 ? 8 AC2 3 SER A 219 ? SER A 207 . ? 1_555 ? 9 AC2 3 ARG A 222 ? ARG A 210 . ? 1_555 ? 10 AC3 5 LYS A 21 ? LYS A 9 . ? 3_554 ? 11 AC3 5 ILE A 83 ? ILE A 71 . ? 1_555 ? 12 AC3 5 GLU A 88 ? GLU A 76 . ? 1_555 ? 13 AC3 5 ARG A 104 ? ARG A 92 . ? 1_555 ? 14 AC3 5 HOH I . ? HOH A 318 . ? 3_554 ? 15 AC4 7 PHE A 95 ? PHE A 83 . ? 1_555 ? 16 AC4 7 LYS A 99 ? LYS A 87 . ? 1_555 ? 17 AC4 7 GLY A 122 ? GLY A 110 . ? 1_555 ? 18 AC4 7 ARG A 210 ? ARG A 198 . ? 2_655 ? 19 AC4 7 HOH I . ? HOH A 292 . ? 1_555 ? 20 AC4 7 HOH I . ? HOH A 339 . ? 1_555 ? 21 AC4 7 HOH I . ? HOH A 358 . ? 1_555 ? 22 AC5 7 VAL A 116 ? VAL A 104 . ? 1_555 ? 23 AC5 7 ILE A 123 ? ILE A 111 . ? 1_555 ? 24 AC5 7 LEU A 125 ? LEU A 113 . ? 1_555 ? 25 AC5 7 VAL A 127 ? VAL A 115 . ? 1_555 ? 26 AC5 7 GLY A 129 ? GLY A 117 . ? 1_555 ? 27 AC5 7 HOH I . ? HOH A 316 . ? 1_555 ? 28 AC5 7 HOH I . ? HOH A 364 . ? 1_555 ? 29 AC6 3 SER A 196 ? SER A 184 . ? 1_555 ? 30 AC6 3 GLU A 214 ? GLU A 202 . ? 2_655 ? 31 AC6 3 ARG A 225 ? ARG A 213 . ? 1_555 ? 32 AC7 5 LYS A 178 ? LYS A 166 . ? 1_555 ? 33 AC7 5 LEU A 181 ? LEU A 169 . ? 1_555 ? 34 AC7 5 ASN A 182 ? ASN A 170 . ? 1_555 ? 35 AC7 5 ARG A 185 ? ARG A 173 . ? 1_555 ? 36 AC7 5 HOH I . ? HOH A 357 . ? 1_555 ? # _atom_sites.entry_id 2ETJ _atom_sites.fract_transf_matrix[1][1] 0.01930 _atom_sites.fract_transf_matrix[1][2] 0.01114 _atom_sites.fract_transf_matrix[1][3] 0.00000 _atom_sites.fract_transf_matrix[2][1] 0.00000 _atom_sites.fract_transf_matrix[2][2] 0.02228 _atom_sites.fract_transf_matrix[2][3] 0.00000 _atom_sites.fract_transf_matrix[3][1] 0.00000 _atom_sites.fract_transf_matrix[3][2] 0.00000 _atom_sites.fract_transf_matrix[3][3] 0.01311 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL MG N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -11 ? ? ? A . n A 1 2 GLY 2 -10 ? ? ? A . n A 1 3 SER 3 -9 ? ? ? A . n A 1 4 ASP 4 -8 ? ? ? A . n A 1 5 LYS 5 -7 ? ? ? A . n A 1 6 ILE 6 -6 ? ? ? A . n A 1 7 HIS 7 -5 ? ? ? A . n A 1 8 HIS 8 -4 ? ? ? A . n A 1 9 HIS 9 -3 ? ? ? A . n A 1 10 HIS 10 -2 ? ? ? A . n A 1 11 HIS 11 -1 ? ? ? A . n A 1 12 HIS 12 0 ? ? ? A . n A 1 13 MSE 13 1 1 MSE MSE A . n A 1 14 GLY 14 2 2 GLY GLY A . n A 1 15 ILE 15 3 3 ILE ILE A . n A 1 16 ASP 16 4 4 ASP ASP A . n A 1 17 GLU 17 5 5 GLU GLU A . n A 1 18 LEU 18 6 6 LEU LEU A . n A 1 19 TYR 19 7 7 TYR TYR A . n A 1 20 LYS 20 8 8 LYS LYS A . n A 1 21 LYS 21 9 9 LYS LYS A . n A 1 22 GLU 22 10 10 GLU GLU A . n A 1 23 PHE 23 11 11 PHE PHE A . n A 1 24 GLY 24 12 12 GLY GLY A . n A 1 25 ILE 25 13 13 ILE ILE A . n A 1 26 VAL 26 14 14 VAL VAL A . n A 1 27 ALA 27 15 15 ALA ALA A . n A 1 28 GLY 28 16 16 GLY GLY A . n A 1 29 VAL 29 17 17 VAL VAL A . n A 1 30 ASP 30 18 18 ASP ASP A . n A 1 31 GLU 31 19 19 GLU GLU A . n A 1 32 ALA 32 20 20 ALA ALA A . n A 1 33 GLY 33 21 21 GLY GLY A . n A 1 34 ARG 34 22 22 ARG ARG A . n A 1 35 GLY 35 23 23 GLY GLY A . n A 1 36 CYS 36 24 24 CYS CYS A . n A 1 37 LEU 37 25 25 LEU LEU A . n A 1 38 ALA 38 26 26 ALA ALA A . n A 1 39 GLY 39 27 27 GLY GLY A . n A 1 40 PRO 40 28 28 PRO PRO A . n A 1 41 VAL 41 29 29 VAL VAL A . n A 1 42 VAL 42 30 30 VAL VAL A . n A 1 43 ALA 43 31 31 ALA ALA A . n A 1 44 ALA 44 32 32 ALA ALA A . n A 1 45 ALA 45 33 33 ALA ALA A . n A 1 46 VAL 46 34 34 VAL VAL A . n A 1 47 VAL 47 35 35 VAL VAL A . n A 1 48 LEU 48 36 36 LEU LEU A . n A 1 49 GLU 49 37 37 GLU GLU A . n A 1 50 LYS 50 38 38 LYS LYS A . n A 1 51 GLU 51 39 39 GLU GLU A . n A 1 52 ILE 52 40 40 ILE ILE A . n A 1 53 GLU 53 41 41 GLU GLU A . n A 1 54 GLY 54 42 ? ? ? A . n A 1 55 ILE 55 43 ? ? ? A . n A 1 56 ASN 56 44 ? ? ? A . n A 1 57 ASP 57 45 ? ? ? A . n A 1 58 SER 58 46 ? ? ? A . n A 1 59 LYS 59 47 ? ? ? A . n A 1 60 GLN 60 48 ? ? ? A . n A 1 61 LEU 61 49 ? ? ? A . n A 1 62 SER 62 50 ? ? ? A . n A 1 63 PRO 63 51 ? ? ? A . n A 1 64 ALA 64 52 52 ALA ALA A . n A 1 65 LYS 65 53 53 LYS LYS A . n A 1 66 ARG 66 54 54 ARG ARG A . n A 1 67 GLU 67 55 55 GLU GLU A . n A 1 68 ARG 68 56 56 ARG ARG A . n A 1 69 LEU 69 57 57 LEU LEU A . n A 1 70 LEU 70 58 58 LEU LEU A . n A 1 71 ASP 71 59 59 ASP ASP A . n A 1 72 GLU 72 60 60 GLU GLU A . n A 1 73 ILE 73 61 61 ILE ILE A . n A 1 74 MSE 74 62 62 MSE MSE A . n A 1 75 GLU 75 63 63 GLU GLU A . n A 1 76 LYS 76 64 64 LYS LYS A . n A 1 77 ALA 77 65 65 ALA ALA A . n A 1 78 ALA 78 66 66 ALA ALA A . n A 1 79 VAL 79 67 67 VAL VAL A . n A 1 80 GLY 80 68 68 GLY GLY A . n A 1 81 ILE 81 69 69 ILE ILE A . n A 1 82 GLY 82 70 70 GLY GLY A . n A 1 83 ILE 83 71 71 ILE ILE A . n A 1 84 ALA 84 72 72 ALA ALA A . n A 1 85 SER 85 73 73 SER SER A . n A 1 86 PRO 86 74 74 PRO PRO A . n A 1 87 GLU 87 75 75 GLU GLU A . n A 1 88 GLU 88 76 76 GLU GLU A . n A 1 89 ILE 89 77 77 ILE ILE A . n A 1 90 ASP 90 78 78 ASP ASP A . n A 1 91 LEU 91 79 79 LEU LEU A . n A 1 92 TYR 92 80 80 TYR TYR A . n A 1 93 ASN 93 81 81 ASN ASN A . n A 1 94 ILE 94 82 82 ILE ILE A . n A 1 95 PHE 95 83 83 PHE PHE A . n A 1 96 ASN 96 84 84 ASN ASN A . n A 1 97 ALA 97 85 85 ALA ALA A . n A 1 98 THR 98 86 86 THR THR A . n A 1 99 LYS 99 87 87 LYS LYS A . n A 1 100 LEU 100 88 88 LEU LEU A . n A 1 101 ALA 101 89 89 ALA ALA A . n A 1 102 MSE 102 90 90 MSE MSE A . n A 1 103 ASN 103 91 91 ASN ASN A . n A 1 104 ARG 104 92 92 ARG ARG A . n A 1 105 ALA 105 93 93 ALA ALA A . n A 1 106 LEU 106 94 94 LEU LEU A . n A 1 107 GLU 107 95 95 GLU GLU A . n A 1 108 ASN 108 96 96 ASN ASN A . n A 1 109 LEU 109 97 97 LEU LEU A . n A 1 110 SER 110 98 98 SER SER A . n A 1 111 VAL 111 99 99 VAL VAL A . n A 1 112 LYS 112 100 100 LYS LYS A . n A 1 113 PRO 113 101 101 PRO PRO A . n A 1 114 SER 114 102 102 SER SER A . n A 1 115 PHE 115 103 103 PHE PHE A . n A 1 116 VAL 116 104 104 VAL VAL A . n A 1 117 LEU 117 105 105 LEU LEU A . n A 1 118 VAL 118 106 106 VAL VAL A . n A 1 119 ASP 119 107 107 ASP ASP A . n A 1 120 GLY 120 108 108 GLY GLY A . n A 1 121 LYS 121 109 109 LYS LYS A . n A 1 122 GLY 122 110 110 GLY GLY A . n A 1 123 ILE 123 111 111 ILE ILE A . n A 1 124 GLU 124 112 112 GLU GLU A . n A 1 125 LEU 125 113 113 LEU LEU A . n A 1 126 SER 126 114 114 SER SER A . n A 1 127 VAL 127 115 115 VAL VAL A . n A 1 128 PRO 128 116 116 PRO PRO A . n A 1 129 GLY 129 117 117 GLY GLY A . n A 1 130 THR 130 118 118 THR THR A . n A 1 131 CYS 131 119 119 CYS CYS A . n A 1 132 LEU 132 120 120 LEU LEU A . n A 1 133 VAL 133 121 121 VAL VAL A . n A 1 134 LYS 134 122 122 LYS LYS A . n A 1 135 GLY 135 123 123 GLY GLY A . n A 1 136 ASP 136 124 124 ASP ASP A . n A 1 137 GLN 137 125 125 GLN GLN A . n A 1 138 LYS 138 126 126 LYS LYS A . n A 1 139 SER 139 127 127 SER SER A . n A 1 140 LYS 140 128 128 LYS LYS A . n A 1 141 LEU 141 129 129 LEU LEU A . n A 1 142 ILE 142 130 130 ILE ILE A . n A 1 143 GLY 143 131 131 GLY GLY A . n A 1 144 ALA 144 132 132 ALA ALA A . n A 1 145 ALA 145 133 133 ALA ALA A . n A 1 146 SER 146 134 134 SER SER A . n A 1 147 ILE 147 135 135 ILE ILE A . n A 1 148 VAL 148 136 136 VAL VAL A . n A 1 149 ALA 149 137 137 ALA ALA A . n A 1 150 LYS 150 138 138 LYS LYS A . n A 1 151 VAL 151 139 139 VAL VAL A . n A 1 152 PHE 152 140 140 PHE PHE A . n A 1 153 ARG 153 141 141 ARG ARG A . n A 1 154 ASP 154 142 142 ASP ASP A . n A 1 155 ARG 155 143 143 ARG ARG A . n A 1 156 LEU 156 144 144 LEU LEU A . n A 1 157 MSE 157 145 145 MSE MSE A . n A 1 158 SER 158 146 146 SER SER A . n A 1 159 GLU 159 147 147 GLU GLU A . n A 1 160 PHE 160 148 148 PHE PHE A . n A 1 161 HIS 161 149 149 HIS HIS A . n A 1 162 ARG 162 150 150 ARG ARG A . n A 1 163 MSE 163 151 151 MSE MSE A . n A 1 164 TYR 164 152 152 TYR TYR A . n A 1 165 PRO 165 153 153 PRO PRO A . n A 1 166 GLN 166 154 154 GLN GLN A . n A 1 167 PHE 167 155 155 PHE PHE A . n A 1 168 SER 168 156 156 SER SER A . n A 1 169 PHE 169 157 157 PHE PHE A . n A 1 170 HIS 170 158 158 HIS HIS A . n A 1 171 LYS 171 159 159 LYS LYS A . n A 1 172 HIS 172 160 160 HIS HIS A . n A 1 173 LYS 173 161 161 LYS LYS A . n A 1 174 GLY 174 162 162 GLY GLY A . n A 1 175 TYR 175 163 163 TYR TYR A . n A 1 176 ALA 176 164 164 ALA ALA A . n A 1 177 THR 177 165 165 THR THR A . n A 1 178 LYS 178 166 166 LYS LYS A . n A 1 179 GLU 179 167 167 GLU GLU A . n A 1 180 HIS 180 168 168 HIS HIS A . n A 1 181 LEU 181 169 169 LEU LEU A . n A 1 182 ASN 182 170 170 ASN ASN A . n A 1 183 GLU 183 171 171 GLU GLU A . n A 1 184 ILE 184 172 172 ILE ILE A . n A 1 185 ARG 185 173 173 ARG ARG A . n A 1 186 LYS 186 174 174 LYS LYS A . n A 1 187 ASN 187 175 175 ASN ASN A . n A 1 188 GLY 188 176 176 GLY GLY A . n A 1 189 VAL 189 177 177 VAL VAL A . n A 1 190 LEU 190 178 178 LEU LEU A . n A 1 191 PRO 191 179 179 PRO PRO A . n A 1 192 ILE 192 180 180 ILE ILE A . n A 1 193 HIS 193 181 181 HIS HIS A . n A 1 194 ARG 194 182 182 ARG ARG A . n A 1 195 LEU 195 183 183 LEU LEU A . n A 1 196 SER 196 184 184 SER SER A . n A 1 197 PHE 197 185 185 PHE PHE A . n A 1 198 GLU 198 186 186 GLU GLU A . n A 1 199 PRO 199 187 187 PRO PRO A . n A 1 200 VAL 200 188 188 VAL VAL A . n A 1 201 LEU 201 189 189 LEU LEU A . n A 1 202 GLU 202 190 190 GLU GLU A . n A 1 203 LEU 203 191 191 LEU LEU A . n A 1 204 LEU 204 192 192 LEU LEU A . n A 1 205 THR 205 193 193 THR THR A . n A 1 206 ASP 206 194 194 ASP ASP A . n A 1 207 ASP 207 195 195 ASP ASP A . n A 1 208 LEU 208 196 196 LEU LEU A . n A 1 209 LEU 209 197 197 LEU LEU A . n A 1 210 ARG 210 198 198 ARG ARG A . n A 1 211 GLU 211 199 199 GLU GLU A . n A 1 212 PHE 212 200 200 PHE PHE A . n A 1 213 PHE 213 201 201 PHE PHE A . n A 1 214 GLU 214 202 202 GLU GLU A . n A 1 215 LYS 215 203 203 LYS LYS A . n A 1 216 GLY 216 204 204 GLY GLY A . n A 1 217 LEU 217 205 205 LEU LEU A . n A 1 218 ILE 218 206 206 ILE ILE A . n A 1 219 SER 219 207 207 SER SER A . n A 1 220 GLU 220 208 208 GLU GLU A . n A 1 221 ASN 221 209 209 ASN ASN A . n A 1 222 ARG 222 210 210 ARG ARG A . n A 1 223 PHE 223 211 211 PHE PHE A . n A 1 224 GLU 224 212 212 GLU GLU A . n A 1 225 ARG 225 213 213 ARG ARG A . n A 1 226 ILE 226 214 214 ILE ILE A . n A 1 227 LEU 227 215 215 LEU LEU A . n A 1 228 ASN 228 216 216 ASN ASN A . n A 1 229 LEU 229 217 217 LEU LEU A . n A 1 230 LEU 230 218 218 LEU LEU A . n A 1 231 GLY 231 219 219 GLY GLY A . n A 1 232 ALA 232 220 220 ALA ALA A . n A 1 233 ARG 233 221 221 ARG ARG A . n A 1 234 LYS 234 222 ? ? ? A . n A 1 235 SER 235 223 ? ? ? A . n A 1 236 VAL 236 224 ? ? ? A . n A 1 237 VAL 237 225 ? ? ? A . n A 1 238 PHE 238 226 ? ? ? A . n A 1 239 ARG 239 227 ? ? ? A . n A 1 240 LYS 240 228 ? ? ? A . n A 1 241 GLU 241 229 ? ? ? A . n A 1 242 ARG 242 230 ? ? ? A . n A 1 243 THR 243 231 ? ? ? A . n A 1 244 ASN 244 232 ? ? ? A . n A 1 245 HIS 245 233 ? ? ? A . n A 1 246 ASN 246 234 ? ? ? A . n A 1 247 LEU 247 235 ? ? ? A . n A 1 248 PRO 248 236 ? ? ? A . n A 1 249 LEU 249 237 ? ? ? A . n A 1 250 PHE 250 238 ? ? ? A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 239 1 MG MG A . C 3 CL 1 240 2 CL CL A . D 4 EDO 1 241 3 EDO EDO A . E 4 EDO 1 242 4 EDO EDO A . F 4 EDO 1 243 5 EDO EDO A . G 4 EDO 1 244 6 EDO EDO A . H 4 EDO 1 245 7 EDO EDO A . I 5 HOH 1 246 8 HOH HOH A . I 5 HOH 2 247 9 HOH HOH A . I 5 HOH 3 248 10 HOH HOH A . I 5 HOH 4 249 11 HOH HOH A . I 5 HOH 5 250 12 HOH HOH A . I 5 HOH 6 251 13 HOH HOH A . I 5 HOH 7 252 14 HOH HOH A . I 5 HOH 8 253 15 HOH HOH A . I 5 HOH 9 254 16 HOH HOH A . I 5 HOH 10 255 17 HOH HOH A . I 5 HOH 11 256 18 HOH HOH A . I 5 HOH 12 257 19 HOH HOH A . I 5 HOH 13 258 20 HOH HOH A . I 5 HOH 14 259 21 HOH HOH A . I 5 HOH 15 260 22 HOH HOH A . I 5 HOH 16 261 23 HOH HOH A . I 5 HOH 17 262 24 HOH HOH A . I 5 HOH 18 263 25 HOH HOH A . I 5 HOH 19 264 26 HOH HOH A . I 5 HOH 20 265 27 HOH HOH A . I 5 HOH 21 266 28 HOH HOH A . I 5 HOH 22 267 29 HOH HOH A . I 5 HOH 23 268 30 HOH HOH A . I 5 HOH 24 269 31 HOH HOH A . I 5 HOH 25 270 32 HOH HOH A . I 5 HOH 26 271 33 HOH HOH A . I 5 HOH 27 272 34 HOH HOH A . I 5 HOH 28 273 35 HOH HOH A . I 5 HOH 29 274 36 HOH HOH A . I 5 HOH 30 275 37 HOH HOH A . I 5 HOH 31 276 38 HOH HOH A . I 5 HOH 32 277 39 HOH HOH A . I 5 HOH 33 278 40 HOH HOH A . I 5 HOH 34 279 41 HOH HOH A . I 5 HOH 35 280 42 HOH HOH A . I 5 HOH 36 281 43 HOH HOH A . I 5 HOH 37 282 44 HOH HOH A . I 5 HOH 38 283 45 HOH HOH A . I 5 HOH 39 284 46 HOH HOH A . I 5 HOH 40 285 47 HOH HOH A . I 5 HOH 41 286 48 HOH HOH A . I 5 HOH 42 287 49 HOH HOH A . I 5 HOH 43 288 50 HOH HOH A . I 5 HOH 44 289 51 HOH HOH A . I 5 HOH 45 290 52 HOH HOH A . I 5 HOH 46 291 53 HOH HOH A . I 5 HOH 47 292 54 HOH HOH A . I 5 HOH 48 293 55 HOH HOH A . I 5 HOH 49 294 56 HOH HOH A . I 5 HOH 50 295 57 HOH HOH A . I 5 HOH 51 296 58 HOH HOH A . I 5 HOH 52 297 59 HOH HOH A . I 5 HOH 53 298 60 HOH HOH A . I 5 HOH 54 299 61 HOH HOH A . I 5 HOH 55 300 62 HOH HOH A . I 5 HOH 56 301 63 HOH HOH A . I 5 HOH 57 302 64 HOH HOH A . I 5 HOH 58 303 65 HOH HOH A . I 5 HOH 59 304 66 HOH HOH A . I 5 HOH 60 305 67 HOH HOH A . I 5 HOH 61 306 68 HOH HOH A . I 5 HOH 62 307 69 HOH HOH A . I 5 HOH 63 308 70 HOH HOH A . I 5 HOH 64 309 71 HOH HOH A . I 5 HOH 65 310 72 HOH HOH A . I 5 HOH 66 311 73 HOH HOH A . I 5 HOH 67 312 74 HOH HOH A . I 5 HOH 68 313 75 HOH HOH A . I 5 HOH 69 314 76 HOH HOH A . I 5 HOH 70 315 77 HOH HOH A . I 5 HOH 71 316 78 HOH HOH A . I 5 HOH 72 317 79 HOH HOH A . I 5 HOH 73 318 80 HOH HOH A . I 5 HOH 74 319 81 HOH HOH A . I 5 HOH 75 320 82 HOH HOH A . I 5 HOH 76 321 83 HOH HOH A . I 5 HOH 77 322 84 HOH HOH A . I 5 HOH 78 323 85 HOH HOH A . I 5 HOH 79 324 86 HOH HOH A . I 5 HOH 80 325 87 HOH HOH A . I 5 HOH 81 326 88 HOH HOH A . I 5 HOH 82 327 89 HOH HOH A . I 5 HOH 83 328 90 HOH HOH A . I 5 HOH 84 329 91 HOH HOH A . I 5 HOH 85 330 92 HOH HOH A . I 5 HOH 86 331 93 HOH HOH A . I 5 HOH 87 332 94 HOH HOH A . I 5 HOH 88 333 95 HOH HOH A . I 5 HOH 89 334 96 HOH HOH A . I 5 HOH 90 335 97 HOH HOH A . I 5 HOH 91 336 98 HOH HOH A . I 5 HOH 92 337 99 HOH HOH A . I 5 HOH 93 338 100 HOH HOH A . I 5 HOH 94 339 101 HOH HOH A . I 5 HOH 95 340 102 HOH HOH A . I 5 HOH 96 341 103 HOH HOH A . I 5 HOH 97 342 104 HOH HOH A . I 5 HOH 98 343 105 HOH HOH A . I 5 HOH 99 344 106 HOH HOH A . I 5 HOH 100 345 107 HOH HOH A . I 5 HOH 101 346 108 HOH HOH A . I 5 HOH 102 347 109 HOH HOH A . I 5 HOH 103 348 110 HOH HOH A . I 5 HOH 104 349 111 HOH HOH A . I 5 HOH 105 350 112 HOH HOH A . I 5 HOH 106 351 113 HOH HOH A . I 5 HOH 107 352 114 HOH HOH A . I 5 HOH 108 353 115 HOH HOH A . I 5 HOH 109 354 116 HOH HOH A . I 5 HOH 110 355 117 HOH HOH A . I 5 HOH 111 356 118 HOH HOH A . I 5 HOH 112 357 119 HOH HOH A . I 5 HOH 113 358 120 HOH HOH A . I 5 HOH 114 359 121 HOH HOH A . I 5 HOH 115 360 122 HOH HOH A . I 5 HOH 116 361 123 HOH HOH A . I 5 HOH 117 362 124 HOH HOH A . I 5 HOH 118 363 125 HOH HOH A . I 5 HOH 119 364 126 HOH HOH A . I 5 HOH 120 365 127 HOH HOH A . I 5 HOH 121 366 128 HOH HOH A . I 5 HOH 122 367 129 HOH HOH A . I 5 HOH 123 368 130 HOH HOH A . I 5 HOH 124 369 131 HOH HOH A . I 5 HOH 125 370 132 HOH HOH A . I 5 HOH 126 371 133 HOH HOH A . I 5 HOH 127 372 134 HOH HOH A . I 5 HOH 128 373 135 HOH HOH A . I 5 HOH 129 374 136 HOH HOH A . I 5 HOH 130 375 137 HOH HOH A . I 5 HOH 131 376 138 HOH HOH A . I 5 HOH 132 377 139 HOH HOH A . I 5 HOH 133 378 140 HOH HOH A . I 5 HOH 134 379 142 HOH HOH A . I 5 HOH 135 380 143 HOH HOH A . I 5 HOH 136 381 144 HOH HOH A . I 5 HOH 137 382 145 HOH HOH A . I 5 HOH 138 383 146 HOH HOH A . I 5 HOH 139 384 147 HOH HOH A . I 5 HOH 140 385 148 HOH HOH A . I 5 HOH 141 386 149 HOH HOH A . I 5 HOH 142 387 150 HOH HOH A . I 5 HOH 143 388 151 HOH HOH A . I 5 HOH 144 389 152 HOH HOH A . I 5 HOH 145 390 153 HOH HOH A . I 5 HOH 146 391 154 HOH HOH A . I 5 HOH 147 392 155 HOH HOH A . I 5 HOH 148 393 156 HOH HOH A . I 5 HOH 149 394 157 HOH HOH A . I 5 HOH 150 395 158 HOH HOH A . I 5 HOH 151 396 159 HOH HOH A . I 5 HOH 152 397 160 HOH HOH A . I 5 HOH 153 398 161 HOH HOH A . I 5 HOH 154 399 162 HOH HOH A . I 5 HOH 155 400 163 HOH HOH A . I 5 HOH 156 401 164 HOH HOH A . I 5 HOH 157 402 165 HOH HOH A . I 5 HOH 158 403 166 HOH HOH A . I 5 HOH 159 404 167 HOH HOH A . I 5 HOH 160 405 168 HOH HOH A . I 5 HOH 161 406 169 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 13 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 74 A MSE 62 ? MET SELENOMETHIONINE 3 A MSE 102 A MSE 90 ? MET SELENOMETHIONINE 4 A MSE 157 A MSE 145 ? MET SELENOMETHIONINE 5 A MSE 163 A MSE 151 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 30 ? A ASP 18 ? 1_555 MG ? B MG . ? A MG 239 ? 1_555 OD2 ? A ASP 119 ? A ASP 107 ? 1_555 95.2 ? 2 OD1 ? A ASP 30 ? A ASP 18 ? 1_555 MG ? B MG . ? A MG 239 ? 1_555 O ? I HOH . ? A HOH 395 ? 1_555 89.4 ? 3 OD2 ? A ASP 119 ? A ASP 107 ? 1_555 MG ? B MG . ? A MG 239 ? 1_555 O ? I HOH . ? A HOH 395 ? 1_555 80.2 ? 4 OD1 ? A ASP 30 ? A ASP 18 ? 1_555 MG ? B MG . ? A MG 239 ? 1_555 O ? I HOH . ? A HOH 396 ? 1_555 177.2 ? 5 OD2 ? A ASP 119 ? A ASP 107 ? 1_555 MG ? B MG . ? A MG 239 ? 1_555 O ? I HOH . ? A HOH 396 ? 1_555 85.9 ? 6 O ? I HOH . ? A HOH 395 ? 1_555 MG ? B MG . ? A MG 239 ? 1_555 O ? I HOH . ? A HOH 396 ? 1_555 88.3 ? 7 OD1 ? A ASP 30 ? A ASP 18 ? 1_555 MG ? B MG . ? A MG 239 ? 1_555 O ? I HOH . ? A HOH 397 ? 1_555 84.5 ? 8 OD2 ? A ASP 119 ? A ASP 107 ? 1_555 MG ? B MG . ? A MG 239 ? 1_555 O ? I HOH . ? A HOH 397 ? 1_555 93.5 ? 9 O ? I HOH . ? A HOH 395 ? 1_555 MG ? B MG . ? A MG 239 ? 1_555 O ? I HOH . ? A HOH 397 ? 1_555 170.8 ? 10 O ? I HOH . ? A HOH 396 ? 1_555 MG ? B MG . ? A MG 239 ? 1_555 O ? I HOH . ? A HOH 397 ? 1_555 98.0 ? 11 OD1 ? A ASP 30 ? A ASP 18 ? 1_555 MG ? B MG . ? A MG 239 ? 1_555 O ? I HOH . ? A HOH 398 ? 1_555 93.9 ? 12 OD2 ? A ASP 119 ? A ASP 107 ? 1_555 MG ? B MG . ? A MG 239 ? 1_555 O ? I HOH . ? A HOH 398 ? 1_555 170.9 ? 13 O ? I HOH . ? A HOH 395 ? 1_555 MG ? B MG . ? A MG 239 ? 1_555 O ? I HOH . ? A HOH 398 ? 1_555 99.9 ? 14 O ? I HOH . ? A HOH 396 ? 1_555 MG ? B MG . ? A MG 239 ? 1_555 O ? I HOH . ? A HOH 398 ? 1_555 85.0 ? 15 O ? I HOH . ? A HOH 397 ? 1_555 MG ? B MG . ? A MG 239 ? 1_555 O ? I HOH . ? A HOH 398 ? 1_555 87.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-11-08 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-01-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_struct_conn_angle 3 4 'Structure model' struct_conn 4 4 'Structure model' struct_ref_seq_dif 5 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.value' 16 4 'Structure model' '_struct_conn.pdbx_dist_value' 17 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 18 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 19 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 20 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 23 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 24 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 25 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 26 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 28 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 29 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 30 4 'Structure model' '_struct_ref_seq_dif.details' 31 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 32 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 33 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 14.3853 _pdbx_refine_tls.origin_y 8.1884 _pdbx_refine_tls.origin_z 3.9748 _pdbx_refine_tls.T[1][1] -0.0846 _pdbx_refine_tls.T[2][2] -0.0070 _pdbx_refine_tls.T[3][3] -0.0677 _pdbx_refine_tls.T[1][2] 0.0078 _pdbx_refine_tls.T[1][3] -0.0147 _pdbx_refine_tls.T[2][3] 0.0203 _pdbx_refine_tls.L[1][1] 1.7344 _pdbx_refine_tls.L[2][2] 0.7987 _pdbx_refine_tls.L[3][3] 0.9833 _pdbx_refine_tls.L[1][2] 0.0144 _pdbx_refine_tls.L[1][3] -0.5758 _pdbx_refine_tls.L[2][3] 0.4210 _pdbx_refine_tls.S[1][1] -0.0456 _pdbx_refine_tls.S[2][2] -0.0161 _pdbx_refine_tls.S[3][3] 0.0617 _pdbx_refine_tls.S[1][2] -0.0483 _pdbx_refine_tls.S[1][3] -0.1762 _pdbx_refine_tls.S[2][3] 0.0593 _pdbx_refine_tls.S[2][1] 0.0504 _pdbx_refine_tls.S[3][1] 0.0455 _pdbx_refine_tls.S[3][2] -0.0402 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id 13 _pdbx_refine_tls_group.end_label_asym_id A _pdbx_refine_tls_group.end_label_seq_id 233 _pdbx_refine_tls_group.selection all _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 1 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 221 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.selection_details ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0019 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran ? 1 SCALA . ? program 'Phil Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/INDEX.html Fortran ? 2 PDB_EXTRACT 1.601 'Jan. 30, 2005' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 3 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 4 CCP4 '(SCALA)' ? ? ? ? 'data scaling' ? ? ? 5 SOLVE . ? ? ? ? phasing ? ? ? 6 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 81 ? ? 87.88 159.17 2 1 LYS A 159 ? ? -98.56 -60.55 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 8 ? CE ? A LYS 20 CE 2 1 Y 1 A LYS 8 ? NZ ? A LYS 20 NZ 3 1 Y 1 A GLU 41 ? CG ? A GLU 53 CG 4 1 Y 1 A GLU 41 ? CD ? A GLU 53 CD 5 1 Y 1 A GLU 41 ? OE1 ? A GLU 53 OE1 6 1 Y 1 A GLU 41 ? OE2 ? A GLU 53 OE2 7 1 Y 1 A LYS 53 ? CG ? A LYS 65 CG 8 1 Y 1 A LYS 53 ? CD ? A LYS 65 CD 9 1 Y 1 A LYS 53 ? CE ? A LYS 65 CE 10 1 Y 1 A LYS 53 ? NZ ? A LYS 65 NZ 11 1 Y 1 A GLU 55 ? OE1 ? A GLU 67 OE1 12 1 Y 1 A GLU 55 ? OE2 ? A GLU 67 OE2 13 1 Y 1 A ARG 56 ? CG ? A ARG 68 CG 14 1 Y 1 A ARG 56 ? CD ? A ARG 68 CD 15 1 Y 1 A ARG 56 ? NE ? A ARG 68 NE 16 1 Y 1 A ARG 56 ? CZ ? A ARG 68 CZ 17 1 Y 1 A ARG 56 ? NH1 ? A ARG 68 NH1 18 1 Y 1 A ARG 56 ? NH2 ? A ARG 68 NH2 19 1 Y 1 A ASP 59 ? CG ? A ASP 71 CG 20 1 Y 1 A ASP 59 ? OD1 ? A ASP 71 OD1 21 1 Y 1 A ASP 59 ? OD2 ? A ASP 71 OD2 22 1 Y 1 A MSE 62 ? CG ? A MSE 74 CG 23 1 Y 1 A MSE 62 ? SE ? A MSE 74 SE 24 1 Y 1 A MSE 62 ? CE ? A MSE 74 CE 25 1 Y 1 A GLU 95 ? CD ? A GLU 107 CD 26 1 Y 1 A GLU 95 ? OE1 ? A GLU 107 OE1 27 1 Y 1 A GLU 95 ? OE2 ? A GLU 107 OE2 28 1 Y 1 A LYS 109 ? CG ? A LYS 121 CG 29 1 Y 1 A LYS 109 ? CD ? A LYS 121 CD 30 1 Y 1 A LYS 109 ? CE ? A LYS 121 CE 31 1 Y 1 A LYS 109 ? NZ ? A LYS 121 NZ 32 1 Y 1 A GLU 112 ? CG ? A GLU 124 CG 33 1 Y 1 A GLU 112 ? CD ? A GLU 124 CD 34 1 Y 1 A GLU 112 ? OE1 ? A GLU 124 OE1 35 1 Y 1 A GLU 112 ? OE2 ? A GLU 124 OE2 36 1 Y 1 A LYS 122 ? CE ? A LYS 134 CE 37 1 Y 1 A LYS 122 ? NZ ? A LYS 134 NZ 38 1 Y 1 A LYS 128 ? CE ? A LYS 140 CE 39 1 Y 1 A LYS 128 ? NZ ? A LYS 140 NZ 40 1 Y 1 A LYS 159 ? NZ ? A LYS 171 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -11 ? A MSE 1 2 1 Y 1 A GLY -10 ? A GLY 2 3 1 Y 1 A SER -9 ? A SER 3 4 1 Y 1 A ASP -8 ? A ASP 4 5 1 Y 1 A LYS -7 ? A LYS 5 6 1 Y 1 A ILE -6 ? A ILE 6 7 1 Y 1 A HIS -5 ? A HIS 7 8 1 Y 1 A HIS -4 ? A HIS 8 9 1 Y 1 A HIS -3 ? A HIS 9 10 1 Y 1 A HIS -2 ? A HIS 10 11 1 Y 1 A HIS -1 ? A HIS 11 12 1 Y 1 A HIS 0 ? A HIS 12 13 1 Y 1 A GLY 42 ? A GLY 54 14 1 Y 1 A ILE 43 ? A ILE 55 15 1 Y 1 A ASN 44 ? A ASN 56 16 1 Y 1 A ASP 45 ? A ASP 57 17 1 Y 1 A SER 46 ? A SER 58 18 1 Y 1 A LYS 47 ? A LYS 59 19 1 Y 1 A GLN 48 ? A GLN 60 20 1 Y 1 A LEU 49 ? A LEU 61 21 1 Y 1 A SER 50 ? A SER 62 22 1 Y 1 A PRO 51 ? A PRO 63 23 1 Y 1 A LYS 222 ? A LYS 234 24 1 Y 1 A SER 223 ? A SER 235 25 1 Y 1 A VAL 224 ? A VAL 236 26 1 Y 1 A VAL 225 ? A VAL 237 27 1 Y 1 A PHE 226 ? A PHE 238 28 1 Y 1 A ARG 227 ? A ARG 239 29 1 Y 1 A LYS 228 ? A LYS 240 30 1 Y 1 A GLU 229 ? A GLU 241 31 1 Y 1 A ARG 230 ? A ARG 242 32 1 Y 1 A THR 231 ? A THR 243 33 1 Y 1 A ASN 232 ? A ASN 244 34 1 Y 1 A HIS 233 ? A HIS 245 35 1 Y 1 A ASN 234 ? A ASN 246 36 1 Y 1 A LEU 235 ? A LEU 247 37 1 Y 1 A PRO 236 ? A PRO 248 38 1 Y 1 A LEU 237 ? A LEU 249 39 1 Y 1 A PHE 238 ? A PHE 250 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 'CHLORIDE ION' CL 4 1,2-ETHANEDIOL EDO 5 water HOH #