data_2F4U # _entry.id 2F4U # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2F4U pdb_00002f4u 10.2210/pdb2f4u/pdb NDB DR0029 ? ? RCSB RCSB035454 ? ? WWPDB D_1000035454 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-05-02 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 2F4U _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2005-11-24 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2F4S . unspecified PDB 2F4T . unspecified PDB 2F4V . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Murray, J.B.' 1 'Meroueh, S.O.' 2 'Russell, R.J.' 3 'Lentzen, G.' 4 'Haddad, J.' 5 'Mobashery, S.' 6 # _citation.id primary _citation.title 'Interactions of designer antibiotics and the bacterial ribosomal aminoacyl-tRNA site' _citation.journal_abbrev Chem.Biol. _citation.journal_volume 13 _citation.page_first 129 _citation.page_last 138 _citation.year 2006 _citation.journal_id_ASTM CBOLE2 _citation.country UK _citation.journal_id_ISSN 1074-5521 _citation.journal_id_CSD 2050 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16492561 _citation.pdbx_database_id_DOI 10.1016/j.chembiol.2005.11.004 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Murray, J.B.' 1 ? primary 'Meroueh, S.O.' 2 ? primary 'Russell, R.J.' 3 ? primary 'Lentzen, G.' 4 ? primary 'Haddad, J.' 5 ? primary 'Mobashery, S.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-R(*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'" 6743.077 2 ? ? ? 'A-site RNA' 2 non-polymer syn ;(2R)-4-AMINO-N-((1R,2S,3R,4R,5S)-5-AMINO-4-[(2-AMINO-2-DEOXY-ALPHA-D-GLUCOPYRANOSYL)OXY]-2-{2-[(3-AMINOPROPYL)AMINO]ETHOXY}-3-HYDROXYCYCLOHEXYL)-2-HYDROXYBUTANAMIDE ; 524.609 1 ? ? ? ? 3 water nat water 18.015 32 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GCGUCACACCGGUGAAGUCGC _entity_poly.pdbx_seq_one_letter_code_can GCGUCACACCGGUGAAGUCGC _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;(2R)-4-AMINO-N-((1R,2S,3R,4R,5S)-5-AMINO-4-[(2-AMINO-2-DEOXY-ALPHA-D-GLUCOPYRANOSYL)OXY]-2-{2-[(3-AMINOPROPYL)AMINO]ETHOXY}-3-HYDROXYCYCLOHEXYL)-2-HYDROXYBUTANAMIDE ; AB6 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 C n 1 3 G n 1 4 U n 1 5 C n 1 6 A n 1 7 C n 1 8 A n 1 9 C n 1 10 C n 1 11 G n 1 12 G n 1 13 U n 1 14 G n 1 15 A n 1 16 A n 1 17 G n 1 18 U n 1 19 C n 1 20 G n 1 21 C n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 AB6 non-polymer . ;(2R)-4-AMINO-N-((1R,2S,3R,4R,5S)-5-AMINO-4-[(2-AMINO-2-DEOXY-ALPHA-D-GLUCOPYRANOSYL)OXY]-2-{2-[(3-AMINOPROPYL)AMINO]ETHOXY}-3-HYDROXYCYCLOHEXYL)-2-HYDROXYBUTANAMIDE ; ? 'C21 H44 N6 O9' 524.609 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1403 1403 G G A . n A 1 2 C 2 1404 1404 C C A . n A 1 3 G 3 1405 1405 G G A . n A 1 4 U 4 1406 1406 U U A . n A 1 5 C 5 1407 1407 C C A . n A 1 6 A 6 1408 1408 A A A . n A 1 7 C 7 1409 1409 C C A . n A 1 8 A 8 1410 1410 A A A . n A 1 9 C 9 1411 1411 C C A . n A 1 10 C 10 1412 1412 C C A . n A 1 11 G 11 1488 1488 G G A . n A 1 12 G 12 1489 1489 G G A . n A 1 13 U 13 1490 1490 U U A . n A 1 14 G 14 1491 1491 G G A . n A 1 15 A 15 1492 1492 A A A . n A 1 16 A 16 1493 1493 A A A . n A 1 17 G 17 1494 1494 G G A . n A 1 18 U 18 1495 1495 U U A . n A 1 19 C 19 1496 1496 C C A . n A 1 20 G 20 1497 1497 G G A . n A 1 21 C 21 1498 1498 C C A . n B 1 1 G 1 1403 1403 G G B . n B 1 2 C 2 1404 1404 C C B . n B 1 3 G 3 1405 1405 G G B . n B 1 4 U 4 1406 1406 U U B . n B 1 5 C 5 1407 1407 C C B . n B 1 6 A 6 1408 1408 A A B . n B 1 7 C 7 1409 1409 C C B . n B 1 8 A 8 1410 1410 A A B . n B 1 9 C 9 1411 1411 C C B . n B 1 10 C 10 1412 1412 C C B . n B 1 11 G 11 1488 1488 G G B . n B 1 12 G 12 1489 1489 G G B . n B 1 13 U 13 1490 1490 U U B . n B 1 14 G 14 1491 1491 G G B . n B 1 15 A 15 1492 1492 A A B . n B 1 16 A 16 1493 1493 A A B . n B 1 17 G 17 1494 1494 G G B . n B 1 18 U 18 1495 1495 U U B . n B 1 19 C 19 1496 1496 C C B . n B 1 20 G 20 1497 1497 G G B . n B 1 21 C 21 1498 1498 C C B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 AB6 1 41 41 AB6 AB6 B . D 3 HOH 1 2 2 HOH HOH A . D 3 HOH 2 6 6 HOH HOH A . D 3 HOH 3 7 7 HOH HOH A . D 3 HOH 4 10 10 HOH HOH A . D 3 HOH 5 11 11 HOH HOH A . D 3 HOH 6 15 15 HOH HOH A . D 3 HOH 7 17 17 HOH HOH A . D 3 HOH 8 21 21 HOH HOH A . D 3 HOH 9 22 22 HOH HOH A . D 3 HOH 10 23 23 HOH HOH A . D 3 HOH 11 24 24 HOH HOH A . D 3 HOH 12 26 26 HOH HOH A . D 3 HOH 13 28 28 HOH HOH A . D 3 HOH 14 30 30 HOH HOH A . D 3 HOH 15 31 31 HOH HOH A . E 3 HOH 1 1 1 HOH HOH B . E 3 HOH 2 3 3 HOH HOH B . E 3 HOH 3 4 4 HOH HOH B . E 3 HOH 4 5 5 HOH HOH B . E 3 HOH 5 8 8 HOH HOH B . E 3 HOH 6 9 9 HOH HOH B . E 3 HOH 7 12 12 HOH HOH B . E 3 HOH 8 13 13 HOH HOH B . E 3 HOH 9 14 14 HOH HOH B . E 3 HOH 10 16 16 HOH HOH B . E 3 HOH 11 18 18 HOH HOH B . E 3 HOH 12 19 19 HOH HOH B . E 3 HOH 13 20 20 HOH HOH B . E 3 HOH 14 25 25 HOH HOH B . E 3 HOH 15 27 27 HOH HOH B . E 3 HOH 16 29 29 HOH HOH B . E 3 HOH 17 32 32 HOH HOH B . # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal d*TREK 7.1SSI 'May 1 2001' package 'Pflugrath, J.W.' jwp@RigakuMSC.com 'data processing' http://www.msc.com/protein/dtrek.html ? ? 1 CNS . ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns.csb.yale.edu/v1.1/ Fortran_77 ? 2 PDB_EXTRACT 1.701 'OCT. 28, 2005' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 3 d*TREK . ? ? ? ? 'data scaling' ? ? ? 4 # _cell.entry_id 2F4U _cell.length_a 33.100 _cell.length_b 46.460 _cell.length_c 89.500 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2F4U _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 2F4U _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.55 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 51.79 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector ? _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date 2002-06-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU300' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54 _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 2F4U _reflns.d_resolution_low 23.23 _reflns.d_resolution_high 2.60 _reflns.number_obs 4451 _reflns.percent_possible_obs 97.600 _reflns.pdbx_Rmerge_I_obs 0.092 _reflns.pdbx_chi_squared ? _reflns.pdbx_redundancy ? _reflns.pdbx_scaling_rejects 300 _reflns.pdbx_netI_over_sigmaI 5.8 _reflns.pdbx_Rsym_value ? _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.number_all 4451 _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_low _reflns_shell.d_res_high _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.number_unique_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.percent_possible_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 2.69 2.60 27 99.800 0.423 ? ? ? 1.6 ? ? ? ? ? 1 2.80 2.69 30 99.800 ? ? ? ? ? ? ? ? ? ? 2 2.93 2.80 18 99.500 ? ? ? ? ? ? ? ? ? ? 3 3.08 2.93 24 98.300 ? ? ? ? ? ? ? ? ? ? 4 3.28 3.08 26 97.300 ? ? ? ? ? ? ? ? ? ? 5 3.53 3.28 27 96.500 ? ? ? ? ? ? ? ? ? ? 6 3.88 3.53 36 98.700 ? ? ? ? ? ? ? ? ? ? 7 4.44 3.88 34 98.500 ? ? ? ? ? ? ? ? ? ? 8 5.58 4.44 42 95.800 ? ? ? ? ? ? ? ? ? ? 9 23.23 5.58 49 93.200 ? ? ? ? ? ? ? ? ? ? 10 # _refine.ls_d_res_high 2.600 _refine.ls_d_res_low 23.23 _refine.pdbx_ls_sigma_F 161.00 _refine.ls_percent_reflns_obs 93.800 _refine.ls_number_reflns_obs 4290 _refine.ls_R_factor_R_work 0.25 _refine.ls_R_factor_R_free 0.299 _refine.ls_percent_reflns_R_free 9.700 _refine.ls_number_reflns_R_free 445 _refine.B_iso_mean 56.636 _refine.solvent_model_param_bsol 95.919 _refine.aniso_B[1][1] 7.806 _refine.aniso_B[2][2] 11.806 _refine.aniso_B[3][3] -19.611 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.entry_id 2F4U _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 4451 _refine.ls_R_factor_all 0.25 _refine.ls_R_factor_obs 0.299 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details Random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.details ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 892 _refine_hist.pdbx_number_atoms_ligand 36 _refine_hist.number_atoms_solvent 32 _refine_hist.number_atoms_total 960 _refine_hist.d_res_high 2.600 _refine_hist.d_res_low 23.23 # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 CNS_TOPPAR:protein_rep.param ? 'X-RAY DIFFRACTION' 2 dna-rna-multi-endo.param ? 'X-RAY DIFFRACTION' 3 893.par ? 'X-RAY DIFFRACTION' 4 CNS_TOPPAR:water.param ? 'X-RAY DIFFRACTION' # _struct.entry_id 2F4U _struct.title 'Asite RNA + designer antibiotic' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2F4U _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'Asite RNA, designer antibiotic, RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 2F4U _struct_ref.pdbx_db_accession 2F4U _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2F4U A 1 ? 21 ? 2F4U 1403 ? 1498 ? 1403 1498 2 1 2F4U B 1 ? 21 ? 2F4U 1403 ? 1498 ? 1403 1498 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 B C 21 N3 ? ? A G 1403 B C 1498 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 B C 21 O2 ? ? A G 1403 B C 1498 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 B C 21 N4 ? ? A G 1403 B C 1498 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A C 2 N3 ? ? ? 1_555 B G 20 N1 ? ? A C 1404 B G 1497 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A C 2 N4 ? ? ? 1_555 B G 20 O6 ? ? A C 1404 B G 1497 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A C 2 O2 ? ? ? 1_555 B G 20 N2 ? ? A C 1404 B G 1497 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A G 3 N1 ? ? ? 1_555 B C 19 N3 ? ? A G 1405 B C 1496 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A G 3 N2 ? ? ? 1_555 B C 19 O2 ? ? A G 1405 B C 1496 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 3 O6 ? ? ? 1_555 B C 19 N4 ? ? A G 1405 B C 1496 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 5 N3 ? ? ? 1_555 B G 17 N1 ? ? A C 1407 B G 1494 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 5 N4 ? ? ? 1_555 B G 17 O6 ? ? A C 1407 B G 1494 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 5 O2 ? ? ? 1_555 B G 17 N2 ? ? A C 1407 B G 1494 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A C 7 N3 ? ? ? 1_555 B G 14 N1 ? ? A C 1409 B G 1491 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A C 7 N4 ? ? ? 1_555 B G 14 O6 ? ? A C 1409 B G 1491 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A C 7 O2 ? ? ? 1_555 B G 14 N2 ? ? A C 1409 B G 1491 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A A 8 N1 ? ? ? 1_555 B U 13 N3 ? ? A A 1410 B U 1490 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A A 8 N6 ? ? ? 1_555 B U 13 O4 ? ? A A 1410 B U 1490 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A C 9 N3 ? ? ? 1_555 B G 12 N1 ? ? A C 1411 B G 1489 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A C 9 N4 ? ? ? 1_555 B G 12 O6 ? ? A C 1411 B G 1489 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A C 9 O2 ? ? ? 1_555 B G 12 N2 ? ? A C 1411 B G 1489 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A C 10 N3 ? ? ? 1_555 B G 11 N1 ? ? A C 1412 B G 1488 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A C 10 N4 ? ? ? 1_555 B G 11 O6 ? ? A C 1412 B G 1488 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A C 10 O2 ? ? ? 1_555 B G 11 N2 ? ? A C 1412 B G 1488 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 11 N1 ? ? ? 1_555 B C 10 N3 ? ? A G 1488 B C 1412 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 11 N2 ? ? ? 1_555 B C 10 O2 ? ? A G 1488 B C 1412 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A G 11 O6 ? ? ? 1_555 B C 10 N4 ? ? A G 1488 B C 1412 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A G 12 N1 ? ? ? 1_555 B C 9 N3 ? ? A G 1489 B C 1411 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A G 12 N2 ? ? ? 1_555 B C 9 O2 ? ? A G 1489 B C 1411 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A G 12 O6 ? ? ? 1_555 B C 9 N4 ? ? A G 1489 B C 1411 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A U 13 N3 ? ? ? 1_555 B A 8 N1 ? ? A U 1490 B A 1410 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A U 13 O4 ? ? ? 1_555 B A 8 N6 ? ? A U 1490 B A 1410 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A G 14 N1 ? ? ? 1_555 B C 7 N3 ? ? A G 1491 B C 1409 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A G 14 N2 ? ? ? 1_555 B C 7 O2 ? ? A G 1491 B C 1409 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A G 14 O6 ? ? ? 1_555 B C 7 N4 ? ? A G 1491 B C 1409 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A A 16 N6 ? ? ? 1_555 B A 6 N1 ? ? A A 1493 B A 1408 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog36 hydrog ? ? A G 17 N1 ? ? ? 1_555 B C 5 N3 ? ? A G 1494 B C 1407 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A G 17 N2 ? ? ? 1_555 B C 5 O2 ? ? A G 1494 B C 1407 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A G 17 O6 ? ? ? 1_555 B C 5 N4 ? ? A G 1494 B C 1407 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A U 18 N3 ? ? ? 1_555 B U 4 O2 ? ? A U 1495 B U 1406 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog40 hydrog ? ? A U 18 O4 ? ? ? 1_555 B U 4 N3 ? ? A U 1495 B U 1406 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog41 hydrog ? ? A C 19 N3 ? ? ? 1_555 B G 3 N1 ? ? A C 1496 B G 1405 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A C 19 N4 ? ? ? 1_555 B G 3 O6 ? ? A C 1496 B G 1405 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A C 19 O2 ? ? ? 1_555 B G 3 N2 ? ? A C 1496 B G 1405 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A G 20 N1 ? ? ? 1_555 B C 2 N3 ? ? A G 1497 B C 1404 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog45 hydrog ? ? A C 21 N3 ? ? ? 1_555 B G 1 N1 ? ? A C 1498 B G 1403 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A C 21 N4 ? ? ? 1_555 B G 1 O6 ? ? A C 1498 B G 1403 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A C 21 O2 ? ? ? 1_555 B G 1 N2 ? ? A C 1498 B G 1403 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B AB6 41 ? 12 'BINDING SITE FOR RESIDUE AB6 B 41' 1 ? ? ? ? ? ? ? # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 G A 3 ? G A 1405 . ? 1_555 ? 2 AC1 12 C A 5 ? C A 1407 . ? 1_555 ? 3 AC1 12 A A 6 ? A A 1408 . ? 1_555 ? 4 AC1 12 HOH E . ? HOH B 1 . ? 1_555 ? 5 AC1 12 HOH E . ? HOH B 20 . ? 1_555 ? 6 AC1 12 G B 14 ? G B 1491 . ? 1_555 ? 7 AC1 12 A B 15 ? A B 1492 . ? 1_555 ? 8 AC1 12 A B 16 ? A B 1493 . ? 1_555 ? 9 AC1 12 G B 17 ? G B 1494 . ? 1_555 ? 10 AC1 12 U B 18 ? U B 1495 . ? 1_555 ? 11 AC1 12 C B 19 ? C B 1496 . ? 1_555 ? 12 AC1 12 G B 20 ? G B 1497 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O4 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 U _pdbx_validate_close_contact.auth_seq_id_1 1495 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O4 _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 U _pdbx_validate_close_contact.auth_seq_id_2 1406 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.13 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 N1 _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 C _pdbx_validate_rmsd_bond.auth_seq_id_1 1412 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 C2 _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 C _pdbx_validate_rmsd_bond.auth_seq_id_2 1412 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.459 _pdbx_validate_rmsd_bond.bond_target_value 1.397 _pdbx_validate_rmsd_bond.bond_deviation 0.062 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.010 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O3'" A A 1492 ? ? P A A 1493 ? ? OP1 A A 1493 ? ? 117.37 110.50 6.87 1.10 Y 2 1 "C2'" A C 1498 ? ? "C3'" A C 1498 ? ? "O3'" A C 1498 ? ? 125.19 113.70 11.49 1.60 N 3 1 "O3'" B G 1494 ? ? P B U 1495 ? ? OP2 B U 1495 ? ? 120.38 110.50 9.88 1.10 Y 4 1 "C5'" B C 1496 ? ? "C4'" B C 1496 ? ? "C3'" B C 1496 ? ? 106.29 115.20 -8.91 1.40 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 U A 1406 ? ? 0.107 'SIDE CHAIN' 2 1 G B 1494 ? ? 0.079 'SIDE CHAIN' # _struct_site_keywords.site_id 1 _struct_site_keywords.text intercalation # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 AB6 C11 C N S 38 AB6 C12 C N R 39 AB6 C21 C N R 40 AB6 C22 C N N 41 AB6 C23 C N N 42 AB6 C24 C N R 43 AB6 C25 C N N 44 AB6 C26 C N N 45 AB6 C29 C N N 46 AB6 C30 C N N 47 AB6 C31 C N R 48 AB6 C32 C N S 49 AB6 C33 C N N 50 AB6 C34 C N N 51 AB6 O11 O N N 52 AB6 N21 N N N 53 AB6 O31 O N N 54 AB6 C41 C N S 55 AB6 O41 O N N 56 AB6 C51 C N R 57 AB6 O51 O N N 58 AB6 C61 C N N 59 AB6 O61 O N N 60 AB6 N12 N N N 61 AB6 N32 N N N 62 AB6 C42 C N R 63 AB6 C52 C N R 64 AB6 O52 O N N 65 AB6 C62 C N S 66 AB6 O62 O N N 67 AB6 N31 N N N 68 AB6 C35 C N N 69 AB6 N35 N N N 70 AB6 O36 O N N 71 AB6 N27 N N N 72 AB6 O28 O N N 73 AB6 H11 H N N 74 AB6 H12 H N N 75 AB6 H21 H N N 76 AB6 H221 H N N 77 AB6 H222 H N N 78 AB6 H24 H N N 79 AB6 H251 H N N 80 AB6 H252 H N N 81 AB6 H261 H N N 82 AB6 H262 H N N 83 AB6 H291 H N N 84 AB6 H292 H N N 85 AB6 H301 H N N 86 AB6 H302 H N N 87 AB6 H3 H N N 88 AB6 H32 H N N 89 AB6 H331 H N N 90 AB6 H332 H N N 91 AB6 H341 H N N 92 AB6 H342 H N N 93 AB6 H211 H N N 94 AB6 H212 H N N 95 AB6 H4 H N N 96 AB6 H41 H N N 97 AB6 H2 H N N 98 AB6 H51 H N N 99 AB6 H611 H N N 100 AB6 H612 H N N 101 AB6 H61 H N N 102 AB6 H5 H N N 103 AB6 H321 H N N 104 AB6 H322 H N N 105 AB6 H42 H N N 106 AB6 H52 H N N 107 AB6 H1 H N N 108 AB6 H62 H N N 109 AB6 H31 H N N 110 AB6 H11A H N N 111 AB6 H12A H N N 112 AB6 H351 H N N 113 AB6 H352 H N N 114 AB6 H271 H N N 115 AB6 H272 H N N 116 AB6 H28 H N N 117 C OP3 O N N 118 C P P N N 119 C OP1 O N N 120 C OP2 O N N 121 C "O5'" O N N 122 C "C5'" C N N 123 C "C4'" C N R 124 C "O4'" O N N 125 C "C3'" C N S 126 C "O3'" O N N 127 C "C2'" C N R 128 C "O2'" O N N 129 C "C1'" C N R 130 C N1 N N N 131 C C2 C N N 132 C O2 O N N 133 C N3 N N N 134 C C4 C N N 135 C N4 N N N 136 C C5 C N N 137 C C6 C N N 138 C HOP3 H N N 139 C HOP2 H N N 140 C "H5'" H N N 141 C "H5''" H N N 142 C "H4'" H N N 143 C "H3'" H N N 144 C "HO3'" H N N 145 C "H2'" H N N 146 C "HO2'" H N N 147 C "H1'" H N N 148 C H41 H N N 149 C H42 H N N 150 C H5 H N N 151 C H6 H N N 152 G OP3 O N N 153 G P P N N 154 G OP1 O N N 155 G OP2 O N N 156 G "O5'" O N N 157 G "C5'" C N N 158 G "C4'" C N R 159 G "O4'" O N N 160 G "C3'" C N S 161 G "O3'" O N N 162 G "C2'" C N R 163 G "O2'" O N N 164 G "C1'" C N R 165 G N9 N Y N 166 G C8 C Y N 167 G N7 N Y N 168 G C5 C Y N 169 G C6 C N N 170 G O6 O N N 171 G N1 N N N 172 G C2 C N N 173 G N2 N N N 174 G N3 N N N 175 G C4 C Y N 176 G HOP3 H N N 177 G HOP2 H N N 178 G "H5'" H N N 179 G "H5''" H N N 180 G "H4'" H N N 181 G "H3'" H N N 182 G "HO3'" H N N 183 G "H2'" H N N 184 G "HO2'" H N N 185 G "H1'" H N N 186 G H8 H N N 187 G H1 H N N 188 G H21 H N N 189 G H22 H N N 190 HOH O O N N 191 HOH H1 H N N 192 HOH H2 H N N 193 U OP3 O N N 194 U P P N N 195 U OP1 O N N 196 U OP2 O N N 197 U "O5'" O N N 198 U "C5'" C N N 199 U "C4'" C N R 200 U "O4'" O N N 201 U "C3'" C N S 202 U "O3'" O N N 203 U "C2'" C N R 204 U "O2'" O N N 205 U "C1'" C N R 206 U N1 N N N 207 U C2 C N N 208 U O2 O N N 209 U N3 N N N 210 U C4 C N N 211 U O4 O N N 212 U C5 C N N 213 U C6 C N N 214 U HOP3 H N N 215 U HOP2 H N N 216 U "H5'" H N N 217 U "H5''" H N N 218 U "H4'" H N N 219 U "H3'" H N N 220 U "HO3'" H N N 221 U "H2'" H N N 222 U "HO2'" H N N 223 U "H1'" H N N 224 U H3 H N N 225 U H5 H N N 226 U H6 H N N 227 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 AB6 C11 C21 sing N N 40 AB6 C11 O11 sing N N 41 AB6 C11 O51 sing N N 42 AB6 C11 H11 sing N N 43 AB6 C12 C22 sing N N 44 AB6 C12 N12 sing N N 45 AB6 C12 C62 sing N N 46 AB6 C12 H12 sing N N 47 AB6 C21 C31 sing N N 48 AB6 C21 N21 sing N N 49 AB6 C21 H21 sing N N 50 AB6 C22 C32 sing N N 51 AB6 C22 H221 sing N N 52 AB6 C22 H222 sing N N 53 AB6 C23 C24 sing N N 54 AB6 C23 N12 sing N N 55 AB6 C23 O36 doub N N 56 AB6 C24 C25 sing N N 57 AB6 C24 O28 sing N N 58 AB6 C24 H24 sing N N 59 AB6 C25 C26 sing N N 60 AB6 C25 H251 sing N N 61 AB6 C25 H252 sing N N 62 AB6 C26 N27 sing N N 63 AB6 C26 H261 sing N N 64 AB6 C26 H262 sing N N 65 AB6 C29 C30 sing N N 66 AB6 C29 O62 sing N N 67 AB6 C29 H291 sing N N 68 AB6 C29 H292 sing N N 69 AB6 C30 N31 sing N N 70 AB6 C30 H301 sing N N 71 AB6 C30 H302 sing N N 72 AB6 C31 O31 sing N N 73 AB6 C31 C41 sing N N 74 AB6 C31 H3 sing N N 75 AB6 C32 N32 sing N N 76 AB6 C32 C42 sing N N 77 AB6 C32 H32 sing N N 78 AB6 C33 C34 sing N N 79 AB6 C33 C35 sing N N 80 AB6 C33 H331 sing N N 81 AB6 C33 H332 sing N N 82 AB6 C34 N35 sing N N 83 AB6 C34 H341 sing N N 84 AB6 C34 H342 sing N N 85 AB6 O11 C42 sing N N 86 AB6 N21 H211 sing N N 87 AB6 N21 H212 sing N N 88 AB6 O31 H4 sing N N 89 AB6 C41 O41 sing N N 90 AB6 C41 C51 sing N N 91 AB6 C41 H41 sing N N 92 AB6 O41 H2 sing N N 93 AB6 C51 O51 sing N N 94 AB6 C51 C61 sing N N 95 AB6 C51 H51 sing N N 96 AB6 C61 O61 sing N N 97 AB6 C61 H611 sing N N 98 AB6 C61 H612 sing N N 99 AB6 O61 H61 sing N N 100 AB6 N12 H5 sing N N 101 AB6 N32 H321 sing N N 102 AB6 N32 H322 sing N N 103 AB6 C42 C52 sing N N 104 AB6 C42 H42 sing N N 105 AB6 C52 O52 sing N N 106 AB6 C52 C62 sing N N 107 AB6 C52 H52 sing N N 108 AB6 O52 H1 sing N N 109 AB6 C62 O62 sing N N 110 AB6 C62 H62 sing N N 111 AB6 N31 C35 sing N N 112 AB6 N31 H31 sing N N 113 AB6 C35 H11A sing N N 114 AB6 C35 H12A sing N N 115 AB6 N35 H351 sing N N 116 AB6 N35 H352 sing N N 117 AB6 N27 H271 sing N N 118 AB6 N27 H272 sing N N 119 AB6 O28 H28 sing N N 120 C OP3 P sing N N 121 C OP3 HOP3 sing N N 122 C P OP1 doub N N 123 C P OP2 sing N N 124 C P "O5'" sing N N 125 C OP2 HOP2 sing N N 126 C "O5'" "C5'" sing N N 127 C "C5'" "C4'" sing N N 128 C "C5'" "H5'" sing N N 129 C "C5'" "H5''" sing N N 130 C "C4'" "O4'" sing N N 131 C "C4'" "C3'" sing N N 132 C "C4'" "H4'" sing N N 133 C "O4'" "C1'" sing N N 134 C "C3'" "O3'" sing N N 135 C "C3'" "C2'" sing N N 136 C "C3'" "H3'" sing N N 137 C "O3'" "HO3'" sing N N 138 C "C2'" "O2'" sing N N 139 C "C2'" "C1'" sing N N 140 C "C2'" "H2'" sing N N 141 C "O2'" "HO2'" sing N N 142 C "C1'" N1 sing N N 143 C "C1'" "H1'" sing N N 144 C N1 C2 sing N N 145 C N1 C6 sing N N 146 C C2 O2 doub N N 147 C C2 N3 sing N N 148 C N3 C4 doub N N 149 C C4 N4 sing N N 150 C C4 C5 sing N N 151 C N4 H41 sing N N 152 C N4 H42 sing N N 153 C C5 C6 doub N N 154 C C5 H5 sing N N 155 C C6 H6 sing N N 156 G OP3 P sing N N 157 G OP3 HOP3 sing N N 158 G P OP1 doub N N 159 G P OP2 sing N N 160 G P "O5'" sing N N 161 G OP2 HOP2 sing N N 162 G "O5'" "C5'" sing N N 163 G "C5'" "C4'" sing N N 164 G "C5'" "H5'" sing N N 165 G "C5'" "H5''" sing N N 166 G "C4'" "O4'" sing N N 167 G "C4'" "C3'" sing N N 168 G "C4'" "H4'" sing N N 169 G "O4'" "C1'" sing N N 170 G "C3'" "O3'" sing N N 171 G "C3'" "C2'" sing N N 172 G "C3'" "H3'" sing N N 173 G "O3'" "HO3'" sing N N 174 G "C2'" "O2'" sing N N 175 G "C2'" "C1'" sing N N 176 G "C2'" "H2'" sing N N 177 G "O2'" "HO2'" sing N N 178 G "C1'" N9 sing N N 179 G "C1'" "H1'" sing N N 180 G N9 C8 sing Y N 181 G N9 C4 sing Y N 182 G C8 N7 doub Y N 183 G C8 H8 sing N N 184 G N7 C5 sing Y N 185 G C5 C6 sing N N 186 G C5 C4 doub Y N 187 G C6 O6 doub N N 188 G C6 N1 sing N N 189 G N1 C2 sing N N 190 G N1 H1 sing N N 191 G C2 N2 sing N N 192 G C2 N3 doub N N 193 G N2 H21 sing N N 194 G N2 H22 sing N N 195 G N3 C4 sing N N 196 HOH O H1 sing N N 197 HOH O H2 sing N N 198 U OP3 P sing N N 199 U OP3 HOP3 sing N N 200 U P OP1 doub N N 201 U P OP2 sing N N 202 U P "O5'" sing N N 203 U OP2 HOP2 sing N N 204 U "O5'" "C5'" sing N N 205 U "C5'" "C4'" sing N N 206 U "C5'" "H5'" sing N N 207 U "C5'" "H5''" sing N N 208 U "C4'" "O4'" sing N N 209 U "C4'" "C3'" sing N N 210 U "C4'" "H4'" sing N N 211 U "O4'" "C1'" sing N N 212 U "C3'" "O3'" sing N N 213 U "C3'" "C2'" sing N N 214 U "C3'" "H3'" sing N N 215 U "O3'" "HO3'" sing N N 216 U "C2'" "O2'" sing N N 217 U "C2'" "C1'" sing N N 218 U "C2'" "H2'" sing N N 219 U "O2'" "HO2'" sing N N 220 U "C1'" N1 sing N N 221 U "C1'" "H1'" sing N N 222 U N1 C2 sing N N 223 U N1 C6 sing N N 224 U C2 O2 doub N N 225 U C2 N3 sing N N 226 U N3 C4 sing N N 227 U N3 H3 sing N N 228 U C4 O4 doub N N 229 U C4 C5 sing N N 230 U C5 C6 doub N N 231 U C5 H5 sing N N 232 U C6 H6 sing N N 233 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2F4U 'double helix' 2F4U 'a-form double helix' 2F4U 'bulge loop' 2F4U 'mismatched base pair' 2F4U 'internal loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 B C 21 1_555 -0.748 -0.359 0.211 9.321 -1.323 -10.506 1 A_G1403:C1498_B A 1403 ? B 1498 ? 19 1 1 A C 2 1_555 B G 20 1_555 -0.500 -0.126 0.090 4.216 -10.079 -1.534 2 A_C1404:G1497_B A 1404 ? B 1497 ? 19 1 1 A G 3 1_555 B C 19 1_555 -0.096 -0.231 0.171 4.007 3.611 3.068 3 A_G1405:C1496_B A 1405 ? B 1496 ? 19 1 1 A C 5 1_555 B G 17 1_555 0.392 -0.423 -0.099 6.899 1.960 -1.522 4 A_C1407:G1494_B A 1407 ? B 1494 ? 19 1 1 A C 7 1_555 B G 14 1_555 -0.949 -0.041 -0.112 8.679 -17.224 2.907 5 A_C1409:G1491_B A 1409 ? B 1491 ? 19 1 1 A A 8 1_555 B U 13 1_555 -0.149 -0.102 0.155 3.692 -14.842 -2.628 6 A_A1410:U1490_B A 1410 ? B 1490 ? 20 1 1 A C 9 1_555 B G 12 1_555 -0.236 -0.120 0.350 1.084 -12.776 3.235 7 A_C1411:G1489_B A 1411 ? B 1489 ? 19 1 1 A C 10 1_555 B G 11 1_555 -0.395 -0.124 -0.281 5.198 -10.001 1.973 8 A_C1412:G1488_B A 1412 ? B 1488 ? 19 1 1 A G 11 1_555 B C 10 1_555 0.133 -0.194 0.124 0.124 -11.172 1.111 9 A_G1488:C1412_B A 1488 ? B 1412 ? 19 1 1 A G 12 1_555 B C 9 1_555 -0.179 -0.216 0.255 -1.100 -16.950 3.803 10 A_G1489:C1411_B A 1489 ? B 1411 ? 19 1 1 A U 13 1_555 B A 8 1_555 0.717 -0.203 0.402 -3.488 -7.763 -0.423 11 A_U1490:A1410_B A 1490 ? B 1410 ? 20 1 1 A G 14 1_555 B C 7 1_555 0.287 -0.291 0.591 -2.185 -15.944 -8.350 12 A_G1491:C1409_B A 1491 ? B 1409 ? 19 1 1 A A 16 1_555 B A 6 1_555 -2.293 -3.640 0.386 -18.093 -31.435 77.712 13 A_A1493:A1408_B A 1493 ? B 1408 ? ? ? 1 A G 17 1_555 B C 5 1_555 1.048 -0.268 0.013 16.625 -0.807 -5.417 14 A_G1494:C1407_B A 1494 ? B 1407 ? 19 1 1 A U 18 1_555 B U 4 1_555 -1.025 -2.357 0.244 -2.976 -3.797 -1.149 15 A_U1495:U1406_B A 1495 ? B 1406 ? 16 1 1 A C 19 1_555 B G 3 1_555 0.311 -0.421 -0.057 5.311 -13.801 0.695 16 A_C1496:G1405_B A 1496 ? B 1405 ? 19 1 1 A G 20 1_555 B C 2 1_555 0.616 0.244 0.167 -2.549 -4.175 14.021 17 A_G1497:C1404_B A 1497 ? B 1404 ? ? 1 1 A C 21 1_555 B G 1 1_555 1.002 0.042 -0.206 0.673 -1.427 2.843 18 A_C1498:G1403_B A 1498 ? B 1403 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 B C 21 1_555 A C 2 1_555 B G 20 1_555 0.410 -2.031 3.457 2.256 0.203 34.254 -3.476 -0.321 3.465 0.344 -3.825 34.326 1 AA_G1403C1404:G1497C1498_BB A 1403 ? B 1498 ? A 1404 ? B 1497 ? 1 A C 2 1_555 B G 20 1_555 A G 3 1_555 B C 19 1_555 -0.105 -1.575 3.140 -0.356 11.594 35.332 -3.849 0.122 2.518 18.497 0.568 37.130 2 AA_C1404G1405:C1496G1497_BB A 1404 ? B 1497 ? A 1405 ? B 1496 ? 1 A C 5 1_555 B G 17 1_555 A C 7 1_555 B G 14 1_555 1.995 -3.229 6.250 -6.792 15.890 75.885 -3.397 -1.943 5.427 12.765 5.456 77.538 3 AA_C1407C1409:G1491G1494_BB A 1407 ? B 1494 ? A 1409 ? B 1491 ? 1 A C 7 1_555 B G 14 1_555 A A 8 1_555 B U 13 1_555 -0.378 -1.556 3.321 -4.364 15.210 37.438 -3.838 0.088 2.553 22.506 6.457 40.534 4 AA_C1409A1410:U1490G1491_BB A 1409 ? B 1491 ? A 1410 ? B 1490 ? 1 A A 8 1_555 B U 13 1_555 A C 9 1_555 B G 12 1_555 1.210 -2.176 3.219 0.008 -0.204 29.662 -4.209 -2.361 3.234 -0.399 -0.015 29.662 5 AA_A1410C1411:G1489U1490_BB A 1410 ? B 1490 ? A 1411 ? B 1489 ? 1 A C 9 1_555 B G 12 1_555 A C 10 1_555 B G 11 1_555 -0.744 -2.071 3.054 2.918 5.755 29.213 -5.043 1.963 2.524 11.237 -5.698 29.902 6 AA_C1411C1412:G1488G1489_BB A 1411 ? B 1489 ? A 1412 ? B 1488 ? 1 A C 10 1_555 B G 11 1_555 A G 11 1_555 B C 10 1_555 -0.210 -1.849 3.525 -3.292 6.469 29.339 -4.891 -0.280 3.061 12.532 6.378 30.205 7 AA_C1412G1488:C1412G1488_BB A 1412 ? B 1488 ? A 1488 ? B 1412 ? 1 A G 11 1_555 B C 10 1_555 A G 12 1_555 B C 9 1_555 -0.032 -1.432 3.062 -1.927 7.202 37.375 -3.014 -0.171 2.747 11.104 2.970 38.085 8 AA_G1488G1489:C1411C1412_BB A 1488 ? B 1412 ? A 1489 ? B 1411 ? 1 A G 12 1_555 B C 9 1_555 A U 13 1_555 B A 8 1_555 0.394 -1.143 3.185 1.097 9.726 36.912 -2.896 -0.473 2.815 15.039 -1.697 38.144 9 AA_G1489U1490:A1410C1411_BB A 1489 ? B 1411 ? A 1490 ? B 1410 ? 1 A U 13 1_555 B A 8 1_555 A G 14 1_555 B C 7 1_555 0.082 -1.992 2.963 4.320 7.614 27.902 -5.321 0.616 2.335 15.319 -8.692 29.216 10 AA_U1490G1491:C1409A1410_BB A 1490 ? B 1410 ? A 1491 ? B 1409 ? 1 A G 14 1_555 B C 7 1_555 A A 16 1_555 B A 6 1_555 -1.624 2.216 2.568 150.715 11.472 -120.425 -1.171 -0.101 2.950 -5.876 77.193 -165.783 11 AA_G1491A1493:A1408C1409_BB A 1491 ? B 1409 ? A 1493 ? B 1408 ? 1 A A 16 1_555 B A 6 1_555 A G 17 1_555 B C 5 1_555 5.434 0.095 1.544 -134.569 104.043 166.068 0.000 -2.778 1.020 52.044 67.313 178.801 12 AA_A1493G1494:C1407A1408_BB A 1493 ? B 1408 ? A 1494 ? B 1407 ? 1 A G 17 1_555 B C 5 1_555 A U 18 1_555 B U 4 1_555 -0.377 -2.185 3.458 -9.597 5.255 28.743 -5.177 -1.210 2.990 10.134 18.508 30.714 13 AA_G1494U1495:U1406C1407_BB A 1494 ? B 1407 ? A 1495 ? B 1406 ? 1 A U 18 1_555 B U 4 1_555 A C 19 1_555 B G 3 1_555 -0.293 -1.035 2.998 3.789 -4.294 38.331 -1.072 0.873 3.050 -6.495 -5.732 38.741 14 AA_U1495C1496:G1405U1406_BB A 1495 ? B 1406 ? A 1496 ? B 1405 ? 1 A C 19 1_555 B G 3 1_555 A G 20 1_555 B C 2 1_555 0.016 -2.235 3.341 -2.190 7.631 27.193 -6.213 -0.504 2.619 15.808 4.536 28.307 15 AA_C1496G1497:C1404G1405_BB A 1496 ? B 1405 ? A 1497 ? B 1404 ? 1 A G 20 1_555 B C 2 1_555 A C 21 1_555 B G 1 1_555 -0.199 -1.900 3.339 3.636 2.017 34.522 -3.488 0.889 3.189 3.383 -6.100 34.764 16 AA_G1497C1498:G1403C1404_BB A 1497 ? B 1404 ? A 1498 ? B 1403 ? # _atom_sites.entry_id 2F4U _atom_sites.fract_transf_matrix[1][1] 0.030211 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021524 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011173 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P # loop_