HEADER RNA BINDING PROTEIN 06-DEC-05 2F9J TITLE 3.0 ANGSTROM RESOLUTION STRUCTURE OF A Y22M MUTANT OF THE SPLICEOSOMAL TITLE 2 PROTEIN P14 BOUND TO A REGION OF SF3B155 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PRE-MRNA BRANCH SITE PROTEIN P14; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: SF3B 14 KDA SUBUNIT; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: SPLICING FACTOR 3B SUBUNIT 1; COMPND 9 CHAIN: P, Q; COMPND 10 FRAGMENT: RESIDUES: 381-415; COMPND 11 SYNONYM: SPLICEOSOME ASSOCIATED PROTEIN 155, SAP 155, SF3B155, PRE- COMPND 12 MRNA SPLICING FACTOR SF3B 155 KDA SUBUNIT; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SF3B14; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMALC2X; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: SF3B1, SAP155; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 19 EXPRESSION_SYSTEM_PLASMID: PGEX6P1 KEYWDS SF3BP14 SF3B155 SAP155 P14Y22M RRM, RNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.J.SCHELLENBERG,A.M.MACMILLAN REVDAT 7 30-AUG-23 2F9J 1 REMARK REVDAT 6 20-OCT-21 2F9J 1 SEQADV REVDAT 5 18-OCT-17 2F9J 1 REMARK REVDAT 4 13-JUL-11 2F9J 1 VERSN REVDAT 3 24-FEB-09 2F9J 1 VERSN REVDAT 2 14-FEB-06 2F9J 1 JRNL REVDAT 1 24-JAN-06 2F9J 0 JRNL AUTH M.J.SCHELLENBERG,R.A.EDWARDS,D.B.RITCHIE,O.A.KENT,M.M.GOLAS, JRNL AUTH 2 H.STARK,J.N.M.GLOVER,A.M.MACMILLAN JRNL TITL CRYSTAL STRUCTURE OF A CORE SPLICEOSOMAL PROTEIN INTERFACE JRNL REF PROC.NATL.ACAD.SCI.USA V. 103 1266 2006 JRNL REFN ISSN 0027-8424 JRNL PMID 16432215 JRNL DOI 10.1073/PNAS.0508048103 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 71.25 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 9775 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.221 REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 488 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 716 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2770 REMARK 3 BIN FREE R VALUE SET COUNT : 34 REMARK 3 BIN FREE R VALUE : 0.3780 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2417 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 11 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 79.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.59000 REMARK 3 B22 (A**2) : 2.59000 REMARK 3 B33 (A**2) : -5.17000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 4.152 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.405 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.329 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 30.705 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.938 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.904 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2467 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3328 ; 1.328 ; 1.985 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 286 ; 6.113 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 132 ;39.670 ;23.939 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 457 ;22.170 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ;17.401 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 347 ; 0.099 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1909 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1098 ; 0.228 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1691 ; 0.311 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 83 ; 0.166 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 37 ; 0.169 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.191 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1490 ; 0.486 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2359 ; 0.870 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1105 ; 1.009 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 969 ; 1.570 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 3 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 12 A 81 2 REMARK 3 1 B 12 B 81 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 280 ; 0.04 ; 0.05 REMARK 3 MEDIUM POSITIONAL 1 A (A): 289 ; 0.49 ; 0.50 REMARK 3 TIGHT THERMAL 1 A (A**2): 280 ; 0.05 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 289 ; 0.36 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 85 A 115 2 REMARK 3 1 B 85 B 115 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 2 A (A): 124 ; 0.03 ; 0.05 REMARK 3 MEDIUM POSITIONAL 2 A (A): 147 ; 0.62 ; 0.50 REMARK 3 TIGHT THERMAL 2 A (A**2): 124 ; 0.03 ; 0.50 REMARK 3 MEDIUM THERMAL 2 A (A**2): 147 ; 0.18 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 3 REMARK 3 CHAIN NAMES : P Q REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 P 396 P 415 2 REMARK 3 1 Q 396 Q 415 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 3 B (A): 80 ; 0.03 ; 0.05 REMARK 3 MEDIUM POSITIONAL 3 B (A): 83 ; 0.90 ; 0.50 REMARK 3 TIGHT THERMAL 3 B (A**2): 80 ; 0.10 ; 0.50 REMARK 3 MEDIUM THERMAL 3 B (A**2): 83 ; 0.34 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 13 A 125 REMARK 3 ORIGIN FOR THE GROUP (A): 5.5160 66.7910 1.5990 REMARK 3 T TENSOR REMARK 3 T11: -0.0734 T22: 0.0623 REMARK 3 T33: -0.2960 T12: -0.0729 REMARK 3 T13: -0.0759 T23: 0.0438 REMARK 3 L TENSOR REMARK 3 L11: 4.8729 L22: 4.1485 REMARK 3 L33: 6.7527 L12: -1.5274 REMARK 3 L13: -3.4390 L23: 3.2910 REMARK 3 S TENSOR REMARK 3 S11: 0.1086 S12: -0.1217 S13: -0.3458 REMARK 3 S21: 0.3132 S22: -0.3445 S23: 0.0392 REMARK 3 S31: -0.0728 S32: -0.2155 S33: 0.2358 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 13 B 125 REMARK 3 ORIGIN FOR THE GROUP (A): 39.9169 41.8576 37.9701 REMARK 3 T TENSOR REMARK 3 T11: 0.0251 T22: -0.0160 REMARK 3 T33: -0.2408 T12: -0.0585 REMARK 3 T13: -0.0385 T23: 0.0429 REMARK 3 L TENSOR REMARK 3 L11: 1.9586 L22: 3.0491 REMARK 3 L33: 4.8658 L12: 0.1356 REMARK 3 L13: 0.8515 L23: 0.1654 REMARK 3 S TENSOR REMARK 3 S11: -0.1775 S12: 0.1940 S13: 0.1868 REMARK 3 S21: 0.0036 S22: -0.0038 S23: 0.0970 REMARK 3 S31: -0.6855 S32: 0.4578 S33: 0.1813 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2F9J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JAN-06. REMARK 100 THE DEPOSITION ID IS D_1000035620. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUL-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.115869 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10288 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : 0.46000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDBID 2F9D REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 60% NAH2PO4/40% K2HPO4 0.5M BETA REMARK 280 -ALANINE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K, PH 6 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.14200 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 25.57100 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 76.71300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: 2 BIOLOGICAL UNITS PER ASU. BIOLOGICAL UNIT CONSISTS OF ONE REMARK 300 P14 MOLECULE BOUND TO ONE SF3B155 FRAGMENT REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, Q REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 MET A 3 REMARK 465 GLN A 4 REMARK 465 ALA A 5 REMARK 465 ALA A 6 REMARK 465 LYS A 7 REMARK 465 ARG A 8 REMARK 465 ALA A 9 REMARK 465 ASN A 10 REMARK 465 ILE A 11 REMARK 465 GLY P 380 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 MET B 3 REMARK 465 GLN B 4 REMARK 465 ALA B 5 REMARK 465 ALA B 6 REMARK 465 LYS B 7 REMARK 465 ARG B 8 REMARK 465 ALA B 9 REMARK 465 ASN B 10 REMARK 465 ILE B 11 REMARK 465 GLY Q 380 REMARK 465 GLU Q 381 REMARK 465 GLN Q 382 REMARK 465 LEU Q 383 REMARK 465 GLN Q 384 REMARK 465 ALA Q 385 REMARK 465 TRP Q 386 REMARK 465 ARG Q 387 REMARK 465 TRP Q 388 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 29 34.51 -93.82 REMARK 500 CYS A 83 -119.01 50.37 REMARK 500 LYS A 100 1.15 -69.45 REMARK 500 THR A 103 -37.61 -38.69 REMARK 500 PRO A 124 81.63 -61.57 REMARK 500 ARG P 387 -57.03 104.23 REMARK 500 LYS B 29 40.00 -91.73 REMARK 500 CYS B 83 -158.98 48.44 REMARK 500 ASN B 84 46.94 -88.31 REMARK 500 PRO B 124 -177.68 -60.87 REMARK 500 ARG Q 390 -75.32 57.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2F9D RELATED DB: PDB REMARK 900 WILDTYPE PROTEIN DBREF 2F9J A 1 125 UNP Q9Y3B4 PM14_HUMAN 1 125 DBREF 2F9J B 1 125 UNP Q9Y3B4 PM14_HUMAN 1 125 DBREF 2F9J P 381 415 UNP O75533 SF3B1_HUMAN 381 415 DBREF 2F9J Q 381 415 UNP O75533 SF3B1_HUMAN 381 415 SEQADV 2F9J MET A 22 UNP Q9Y3B4 TYR 22 ENGINEERED MUTATION SEQADV 2F9J MET B 22 UNP Q9Y3B4 TYR 22 ENGINEERED MUTATION SEQADV 2F9J GLY P 380 UNP O75533 ENGINEERED MUTATION SEQADV 2F9J GLY Q 380 UNP O75533 ENGINEERED MUTATION SEQRES 1 A 125 MET ALA MET GLN ALA ALA LYS ARG ALA ASN ILE ARG LEU SEQRES 2 A 125 PRO PRO GLU VAL ASN ARG ILE LEU MET ILE ARG ASN LEU SEQRES 3 A 125 PRO TYR LYS ILE THR ALA GLU GLU MET TYR ASP ILE PHE SEQRES 4 A 125 GLY LYS TYR GLY PRO ILE ARG GLN ILE ARG VAL GLY ASN SEQRES 5 A 125 THR PRO GLU THR ARG GLY THR ALA TYR VAL VAL TYR GLU SEQRES 6 A 125 ASP ILE PHE ASP ALA LYS ASN ALA CYS ASP HIS LEU SER SEQRES 7 A 125 GLY PHE ASN VAL CYS ASN ARG TYR LEU VAL VAL LEU TYR SEQRES 8 A 125 TYR ASN ALA ASN ARG ALA PHE GLN LYS MET ASP THR LYS SEQRES 9 A 125 LYS LYS GLU GLU GLN LEU LYS LEU LEU LYS GLU LYS TYR SEQRES 10 A 125 GLY ILE ASN THR ASP PRO PRO LYS SEQRES 1 P 36 GLY GLU GLN LEU GLN ALA TRP ARG TRP GLU ARG GLU ILE SEQRES 2 P 36 ASP GLU ARG ASN ARG PRO LEU SER ASP GLU GLU LEU ASP SEQRES 3 P 36 ALA MET PHE PRO GLU GLY TYR LYS VAL LEU SEQRES 1 B 125 MET ALA MET GLN ALA ALA LYS ARG ALA ASN ILE ARG LEU SEQRES 2 B 125 PRO PRO GLU VAL ASN ARG ILE LEU MET ILE ARG ASN LEU SEQRES 3 B 125 PRO TYR LYS ILE THR ALA GLU GLU MET TYR ASP ILE PHE SEQRES 4 B 125 GLY LYS TYR GLY PRO ILE ARG GLN ILE ARG VAL GLY ASN SEQRES 5 B 125 THR PRO GLU THR ARG GLY THR ALA TYR VAL VAL TYR GLU SEQRES 6 B 125 ASP ILE PHE ASP ALA LYS ASN ALA CYS ASP HIS LEU SER SEQRES 7 B 125 GLY PHE ASN VAL CYS ASN ARG TYR LEU VAL VAL LEU TYR SEQRES 8 B 125 TYR ASN ALA ASN ARG ALA PHE GLN LYS MET ASP THR LYS SEQRES 9 B 125 LYS LYS GLU GLU GLN LEU LYS LEU LEU LYS GLU LYS TYR SEQRES 10 B 125 GLY ILE ASN THR ASP PRO PRO LYS SEQRES 1 Q 36 GLY GLU GLN LEU GLN ALA TRP ARG TRP GLU ARG GLU ILE SEQRES 2 Q 36 ASP GLU ARG ASN ARG PRO LEU SER ASP GLU GLU LEU ASP SEQRES 3 Q 36 ALA MET PHE PRO GLU GLY TYR LYS VAL LEU FORMUL 5 HOH *11(H2 O) HELIX 1 1 THR A 31 LYS A 41 1 11 HELIX 2 2 ASP A 66 SER A 78 1 13 HELIX 3 3 ASN A 93 PHE A 98 1 6 HELIX 4 4 ASP A 102 TYR A 117 1 16 HELIX 5 5 GLU P 381 ARG P 395 1 15 HELIX 6 6 SER P 400 ALA P 406 1 7 HELIX 7 7 THR B 31 LYS B 41 1 11 HELIX 8 8 ASP B 66 SER B 78 1 13 HELIX 9 9 ASN B 93 PHE B 98 1 6 HELIX 10 10 ASP B 102 TYR B 117 1 16 HELIX 11 11 ARG Q 390 ARG Q 395 1 6 HELIX 12 12 SER Q 400 ALA Q 406 1 7 SHEET 1 A 5 VAL A 88 TYR A 91 0 SHEET 2 A 5 ILE A 20 ARG A 24 -1 N MET A 22 O LEU A 90 SHEET 3 A 5 ALA A 60 TYR A 64 -1 O ALA A 60 N ILE A 23 SHEET 4 A 5 ILE A 45 GLY A 51 -1 N GLN A 47 O VAL A 63 SHEET 5 A 5 TYR P 412 VAL P 414 -1 O LYS P 413 N VAL A 50 SHEET 1 B 2 ASN A 81 VAL A 82 0 SHEET 2 B 2 ARG A 85 TYR A 86 -1 O ARG A 85 N VAL A 82 SHEET 1 C 5 VAL B 88 TYR B 91 0 SHEET 2 C 5 ILE B 20 ARG B 24 -1 N MET B 22 O LEU B 90 SHEET 3 C 5 ALA B 60 TYR B 64 -1 O ALA B 60 N ILE B 23 SHEET 4 C 5 ILE B 45 GLY B 51 -1 N GLN B 47 O VAL B 63 SHEET 5 C 5 TYR Q 412 VAL Q 414 -1 O LYS Q 413 N VAL B 50 SHEET 1 D 2 ASN B 81 VAL B 82 0 SHEET 2 D 2 ARG B 85 TYR B 86 -1 O ARG B 85 N VAL B 82 CRYST1 71.271 71.271 102.284 90.00 90.00 90.00 P 41 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014031 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014031 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009777 0.00000