data_2FA4 # _entry.id 2FA4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.286 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2FA4 RCSB RCSB035641 WWPDB D_1000035641 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1ERT 'HUMAN THIOREDOXIN (REDUCED FORM)' unspecified PDB 1EP7 'CRYSTAL STRUCTURE OF WT THIOREDOXIN H FROM CHLAMYDOMONAS' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2FA4 _pdbx_database_status.recvd_initial_deposition_date 2005-12-06 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bao, R.' 1 'Tang, Y.J.' 2 'Zhou, C.Z.' 3 'Chen, Y.' 4 # _citation.id primary _citation.title 'Crystal structure of the yeast cytoplasmic thioredoxin Trx2' _citation.journal_abbrev Proteins _citation.journal_volume 66 _citation.page_first 246 _citation.page_last 249 _citation.year 2007 _citation.journal_id_ASTM PSFGEY _citation.country US _citation.journal_id_ISSN 0887-3585 _citation.journal_id_CSD 0867 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17044062 _citation.pdbx_database_id_DOI 10.1002/prot.21194 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Bao, R.' 1 primary 'Chen, Y.' 2 primary 'Tang, Y.J.' 3 primary 'Janin, J.' 4 primary 'Zhou, C.Z.' 5 # _cell.entry_id 2FA4 _cell.length_a 83.151 _cell.length_b 83.151 _cell.length_c 64.732 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2FA4 _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Thioredoxin II' 12173.913 2 ? ? ? ? 2 water nat water 18.015 86 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'TR-II, Thioredoxin 1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MHHHHHHMVTQLKSASEYDSALASGDKLVVVDFFATWCGPCKMIAPMIEKFAEQYSDAAFYKLDVDEVSDVAQKAEVSSM PTLIFYKGGKEVTRVVGANPAAIKQAIASNV ; _entity_poly.pdbx_seq_one_letter_code_can ;MHHHHHHMVTQLKSASEYDSALASGDKLVVVDFFATWCGPCKMIAPMIEKFAEQYSDAAFYKLDVDEVSDVAQKAEVSSM PTLIFYKGGKEVTRVVGANPAAIKQAIASNV ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 MET n 1 9 VAL n 1 10 THR n 1 11 GLN n 1 12 LEU n 1 13 LYS n 1 14 SER n 1 15 ALA n 1 16 SER n 1 17 GLU n 1 18 TYR n 1 19 ASP n 1 20 SER n 1 21 ALA n 1 22 LEU n 1 23 ALA n 1 24 SER n 1 25 GLY n 1 26 ASP n 1 27 LYS n 1 28 LEU n 1 29 VAL n 1 30 VAL n 1 31 VAL n 1 32 ASP n 1 33 PHE n 1 34 PHE n 1 35 ALA n 1 36 THR n 1 37 TRP n 1 38 CYS n 1 39 GLY n 1 40 PRO n 1 41 CYS n 1 42 LYS n 1 43 MET n 1 44 ILE n 1 45 ALA n 1 46 PRO n 1 47 MET n 1 48 ILE n 1 49 GLU n 1 50 LYS n 1 51 PHE n 1 52 ALA n 1 53 GLU n 1 54 GLN n 1 55 TYR n 1 56 SER n 1 57 ASP n 1 58 ALA n 1 59 ALA n 1 60 PHE n 1 61 TYR n 1 62 LYS n 1 63 LEU n 1 64 ASP n 1 65 VAL n 1 66 ASP n 1 67 GLU n 1 68 VAL n 1 69 SER n 1 70 ASP n 1 71 VAL n 1 72 ALA n 1 73 GLN n 1 74 LYS n 1 75 ALA n 1 76 GLU n 1 77 VAL n 1 78 SER n 1 79 SER n 1 80 MET n 1 81 PRO n 1 82 THR n 1 83 LEU n 1 84 ILE n 1 85 PHE n 1 86 TYR n 1 87 LYS n 1 88 GLY n 1 89 GLY n 1 90 LYS n 1 91 GLU n 1 92 VAL n 1 93 THR n 1 94 ARG n 1 95 VAL n 1 96 VAL n 1 97 GLY n 1 98 ALA n 1 99 ASN n 1 100 PRO n 1 101 ALA n 1 102 ALA n 1 103 ILE n 1 104 LYS n 1 105 GLN n 1 106 ALA n 1 107 ILE n 1 108 ALA n 1 109 SER n 1 110 ASN n 1 111 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ;baker's yeast ; _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4932 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TRX2_YEAST _struct_ref.pdbx_db_accession P22803 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2FA4 A 8 ? 111 ? P22803 1 ? 104 ? 1 104 2 1 2FA4 B 8 ? 111 ? P22803 1 ? 104 ? 1 104 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2FA4 MET A 1 ? UNP P22803 ? ? 'EXPRESSION TAG' -6 1 1 2FA4 HIS A 2 ? UNP P22803 ? ? 'EXPRESSION TAG' -5 2 1 2FA4 HIS A 3 ? UNP P22803 ? ? 'EXPRESSION TAG' -4 3 1 2FA4 HIS A 4 ? UNP P22803 ? ? 'EXPRESSION TAG' -3 4 1 2FA4 HIS A 5 ? UNP P22803 ? ? 'EXPRESSION TAG' -2 5 1 2FA4 HIS A 6 ? UNP P22803 ? ? 'EXPRESSION TAG' -1 6 1 2FA4 HIS A 7 ? UNP P22803 ? ? 'EXPRESSION TAG' 0 7 2 2FA4 MET B 1 ? UNP P22803 ? ? 'EXPRESSION TAG' -6 8 2 2FA4 HIS B 2 ? UNP P22803 ? ? 'EXPRESSION TAG' -5 9 2 2FA4 HIS B 3 ? UNP P22803 ? ? 'EXPRESSION TAG' -4 10 2 2FA4 HIS B 4 ? UNP P22803 ? ? 'EXPRESSION TAG' -3 11 2 2FA4 HIS B 5 ? UNP P22803 ? ? 'EXPRESSION TAG' -2 12 2 2FA4 HIS B 6 ? UNP P22803 ? ? 'EXPRESSION TAG' -1 13 2 2FA4 HIS B 7 ? UNP P22803 ? ? 'EXPRESSION TAG' 0 14 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2FA4 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.49 _exptl_crystal.density_percent_sol 50.67 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method EVAPORATION _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pdbx_details '0.2M ammonium sulfate, 0.1M sodium acetate buffer, 30%(w/v) PEG mmE 2000, pH 4.6, EVAPORATION, temperature 289K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2005-08-30 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54179 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54179 # _reflns.entry_id 2FA4 _reflns.observed_criterion_sigma_I 110.5 _reflns.observed_criterion_sigma_F 10.5 _reflns.d_resolution_low 30.165 _reflns.d_resolution_high 2.376 _reflns.number_obs 9445 _reflns.number_all 9601 _reflns.percent_possible_obs 98.3 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.4 _reflns_shell.d_res_low ? _reflns_shell.percent_possible_all 98 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2FA4 _refine.ls_number_reflns_obs 8991 _refine.ls_number_reflns_all 9601 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.16 _refine.ls_d_res_high 2.38 _refine.ls_percent_reflns_obs 98.29 _refine.ls_R_factor_obs 0.20818 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.20583 _refine.ls_R_factor_R_free 0.25861 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 453 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.930 _refine.correlation_coeff_Fo_to_Fc_free 0.895 _refine.B_iso_mean 25.943 _refine.aniso_B[1][1] -0.22 _refine.aniso_B[2][2] -0.22 _refine.aniso_B[3][3] 0.44 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.418 _refine.pdbx_overall_ESU_R_Free 0.270 _refine.overall_SU_ML 0.143 _refine.overall_SU_B 5.769 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1570 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 86 _refine_hist.number_atoms_total 1656 _refine_hist.d_res_high 2.38 _refine_hist.d_res_low 30.16 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.022 0.022 ? 1600 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.591 1.965 ? 2168 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.100 5.000 ? 206 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 42.339 26.000 ? 60 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.313 15.000 ? 274 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 26.717 15.000 ? 2 'X-RAY DIFFRACTION' ? r_chiral_restr 0.107 0.200 ? 250 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.008 0.020 ? 1180 'X-RAY DIFFRACTION' ? r_nbd_refined 0.225 0.200 ? 702 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.305 0.200 ? 1108 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.194 0.200 ? 88 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.255 0.200 ? 19 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.076 0.200 ? 4 'X-RAY DIFFRACTION' ? r_mcbond_it 2.570 1.500 ? 1062 'X-RAY DIFFRACTION' ? r_mcangle_it 2.963 2.000 ? 1668 'X-RAY DIFFRACTION' ? r_scbond_it 4.333 3.000 ? 618 'X-RAY DIFFRACTION' ? r_scangle_it 6.383 4.500 ? 500 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso 1 A 784 0.42 0.50 'medium positional' 1 'X-RAY DIFFRACTION' 1 ? ? ? 1 A 784 2.41 2.00 'medium thermal' 1 'X-RAY DIFFRACTION' 2 ? ? ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.376 _refine_ls_shell.d_res_low 2.438 _refine_ls_shell.number_reflns_R_work 519 _refine_ls_shell.R_factor_R_work 0.222 _refine_ls_shell.percent_reflns_obs 77.87 _refine_ls_shell.R_factor_R_free 0.309 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 30 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 A 1 2 B # loop_ _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.selection_details 1 A 1 A 104 1 4 A MET 8 ? A VAL 111 ? 1 ? 2 B 1 B 104 1 4 B MET 8 ? B VAL 111 ? 1 ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 2FA4 _struct.title 'Crystal Structure of Oxidized Form from Saccharomyces cerevisiae' _struct.pdbx_descriptor 'Thioredoxin II' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2FA4 _struct_keywords.pdbx_keywords 'ELECTRON TRANSPORT' _struct_keywords.text 'ALPHA/BETA SANDWICH, DIMER, ELECTRON TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 14 ? ALA A 23 ? SER A 7 ALA A 16 1 ? 10 HELX_P HELX_P2 2 CYS A 38 ? TYR A 55 ? CYS A 31 TYR A 48 1 ? 18 HELX_P HELX_P3 3 VAL A 68 ? ALA A 75 ? VAL A 61 ALA A 68 1 ? 8 HELX_P HELX_P4 4 ASN A 99 ? VAL A 111 ? ASN A 92 VAL A 104 1 ? 13 HELX_P HELX_P5 5 SER B 14 ? LEU B 22 ? SER B 7 LEU B 15 1 ? 9 HELX_P HELX_P6 6 CYS B 38 ? TYR B 55 ? CYS B 31 TYR B 48 1 ? 18 HELX_P HELX_P7 7 VAL B 68 ? ALA B 75 ? VAL B 61 ALA B 68 1 ? 8 HELX_P HELX_P8 8 ASN B 99 ? VAL B 111 ? ASN B 92 VAL B 104 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 38 SG ? ? ? 1_555 A CYS 41 SG ? ? A CYS 31 A CYS 34 1_555 ? ? ? ? ? ? ? 2.085 ? disulf2 disulf ? ? B CYS 38 SG ? ? ? 1_555 B CYS 41 SG ? ? B CYS 31 B CYS 34 1_555 ? ? ? ? ? ? ? 2.075 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 MET 80 A . ? MET 73 A PRO 81 A ? PRO 74 A 1 -3.89 2 MET 80 B . ? MET 73 B PRO 81 B ? PRO 74 B 1 -6.11 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 10 ? LEU A 12 ? THR A 3 LEU A 5 A 2 ALA A 58 ? ASP A 64 ? ALA A 51 ASP A 57 A 3 LEU A 28 ? PHE A 34 ? LEU A 21 PHE A 27 A 4 THR A 82 ? LYS A 87 ? THR A 75 LYS A 80 A 5 LYS A 90 ? VAL A 96 ? LYS A 83 VAL A 89 B 1 THR B 10 ? GLN B 11 ? THR B 3 GLN B 4 B 2 ALA B 59 ? ASP B 64 ? ALA B 52 ASP B 57 B 3 LEU B 28 ? PHE B 34 ? LEU B 21 PHE B 27 B 4 THR B 82 ? LYS B 87 ? THR B 75 LYS B 80 B 5 LYS B 90 ? VAL B 96 ? LYS B 83 VAL B 89 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 12 ? N LEU A 5 O LYS A 62 ? O LYS A 55 A 2 3 O LEU A 63 ? O LEU A 56 N ASP A 32 ? N ASP A 25 A 3 4 N VAL A 29 ? N VAL A 22 O TYR A 86 ? O TYR A 79 A 4 5 N PHE A 85 ? N PHE A 78 O VAL A 92 ? O VAL A 85 B 1 2 N THR B 10 ? N THR B 3 O LYS B 62 ? O LYS B 55 B 2 3 O LEU B 63 ? O LEU B 56 N ASP B 32 ? N ASP B 25 B 3 4 N PHE B 33 ? N PHE B 26 O THR B 82 ? O THR B 75 B 4 5 N PHE B 85 ? N PHE B 78 O VAL B 92 ? O VAL B 85 # _database_PDB_matrix.entry_id 2FA4 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2FA4 _atom_sites.fract_transf_matrix[1][1] 0.012026 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012026 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015448 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -6 ? ? ? A . n A 1 2 HIS 2 -5 ? ? ? A . n A 1 3 HIS 3 -4 ? ? ? A . n A 1 4 HIS 4 -3 ? ? ? A . n A 1 5 HIS 5 -2 ? ? ? A . n A 1 6 HIS 6 -1 ? ? ? A . n A 1 7 HIS 7 0 ? ? ? A . n A 1 8 MET 8 1 1 MET MET A . n A 1 9 VAL 9 2 2 VAL VAL A . n A 1 10 THR 10 3 3 THR THR A . n A 1 11 GLN 11 4 4 GLN GLN A . n A 1 12 LEU 12 5 5 LEU LEU A . n A 1 13 LYS 13 6 6 LYS LYS A . n A 1 14 SER 14 7 7 SER SER A . n A 1 15 ALA 15 8 8 ALA ALA A . n A 1 16 SER 16 9 9 SER SER A . n A 1 17 GLU 17 10 10 GLU GLU A . n A 1 18 TYR 18 11 11 TYR TYR A . n A 1 19 ASP 19 12 12 ASP ASP A . n A 1 20 SER 20 13 13 SER SER A . n A 1 21 ALA 21 14 14 ALA ALA A . n A 1 22 LEU 22 15 15 LEU LEU A . n A 1 23 ALA 23 16 16 ALA ALA A . n A 1 24 SER 24 17 17 SER SER A . n A 1 25 GLY 25 18 18 GLY GLY A . n A 1 26 ASP 26 19 19 ASP ASP A . n A 1 27 LYS 27 20 20 LYS LYS A . n A 1 28 LEU 28 21 21 LEU LEU A . n A 1 29 VAL 29 22 22 VAL VAL A . n A 1 30 VAL 30 23 23 VAL VAL A . n A 1 31 VAL 31 24 24 VAL VAL A . n A 1 32 ASP 32 25 25 ASP ASP A . n A 1 33 PHE 33 26 26 PHE PHE A . n A 1 34 PHE 34 27 27 PHE PHE A . n A 1 35 ALA 35 28 28 ALA ALA A . n A 1 36 THR 36 29 29 THR THR A . n A 1 37 TRP 37 30 30 TRP TRP A . n A 1 38 CYS 38 31 31 CYS CYS A . n A 1 39 GLY 39 32 32 GLY GLY A . n A 1 40 PRO 40 33 33 PRO PRO A . n A 1 41 CYS 41 34 34 CYS CYS A . n A 1 42 LYS 42 35 35 LYS LYS A . n A 1 43 MET 43 36 36 MET MET A . n A 1 44 ILE 44 37 37 ILE ILE A . n A 1 45 ALA 45 38 38 ALA ALA A . n A 1 46 PRO 46 39 39 PRO PRO A . n A 1 47 MET 47 40 40 MET MET A . n A 1 48 ILE 48 41 41 ILE ILE A . n A 1 49 GLU 49 42 42 GLU GLU A . n A 1 50 LYS 50 43 43 LYS LYS A . n A 1 51 PHE 51 44 44 PHE PHE A . n A 1 52 ALA 52 45 45 ALA ALA A . n A 1 53 GLU 53 46 46 GLU GLU A . n A 1 54 GLN 54 47 47 GLN GLN A . n A 1 55 TYR 55 48 48 TYR TYR A . n A 1 56 SER 56 49 49 SER SER A . n A 1 57 ASP 57 50 50 ASP ASP A . n A 1 58 ALA 58 51 51 ALA ALA A . n A 1 59 ALA 59 52 52 ALA ALA A . n A 1 60 PHE 60 53 53 PHE PHE A . n A 1 61 TYR 61 54 54 TYR TYR A . n A 1 62 LYS 62 55 55 LYS LYS A . n A 1 63 LEU 63 56 56 LEU LEU A . n A 1 64 ASP 64 57 57 ASP ASP A . n A 1 65 VAL 65 58 58 VAL VAL A . n A 1 66 ASP 66 59 59 ASP ASP A . n A 1 67 GLU 67 60 60 GLU GLU A . n A 1 68 VAL 68 61 61 VAL VAL A . n A 1 69 SER 69 62 62 SER SER A . n A 1 70 ASP 70 63 63 ASP ASP A . n A 1 71 VAL 71 64 64 VAL VAL A . n A 1 72 ALA 72 65 65 ALA ALA A . n A 1 73 GLN 73 66 66 GLN GLN A . n A 1 74 LYS 74 67 67 LYS LYS A . n A 1 75 ALA 75 68 68 ALA ALA A . n A 1 76 GLU 76 69 69 GLU GLU A . n A 1 77 VAL 77 70 70 VAL VAL A . n A 1 78 SER 78 71 71 SER SER A . n A 1 79 SER 79 72 72 SER SER A . n A 1 80 MET 80 73 73 MET MET A . n A 1 81 PRO 81 74 74 PRO PRO A . n A 1 82 THR 82 75 75 THR THR A . n A 1 83 LEU 83 76 76 LEU LEU A . n A 1 84 ILE 84 77 77 ILE ILE A . n A 1 85 PHE 85 78 78 PHE PHE A . n A 1 86 TYR 86 79 79 TYR TYR A . n A 1 87 LYS 87 80 80 LYS LYS A . n A 1 88 GLY 88 81 81 GLY GLY A . n A 1 89 GLY 89 82 82 GLY GLY A . n A 1 90 LYS 90 83 83 LYS LYS A . n A 1 91 GLU 91 84 84 GLU GLU A . n A 1 92 VAL 92 85 85 VAL VAL A . n A 1 93 THR 93 86 86 THR THR A . n A 1 94 ARG 94 87 87 ARG ARG A . n A 1 95 VAL 95 88 88 VAL VAL A . n A 1 96 VAL 96 89 89 VAL VAL A . n A 1 97 GLY 97 90 90 GLY GLY A . n A 1 98 ALA 98 91 91 ALA ALA A . n A 1 99 ASN 99 92 92 ASN ASN A . n A 1 100 PRO 100 93 93 PRO PRO A . n A 1 101 ALA 101 94 94 ALA ALA A . n A 1 102 ALA 102 95 95 ALA ALA A . n A 1 103 ILE 103 96 96 ILE ILE A . n A 1 104 LYS 104 97 97 LYS LYS A . n A 1 105 GLN 105 98 98 GLN GLN A . n A 1 106 ALA 106 99 99 ALA ALA A . n A 1 107 ILE 107 100 100 ILE ILE A . n A 1 108 ALA 108 101 101 ALA ALA A . n A 1 109 SER 109 102 102 SER SER A . n A 1 110 ASN 110 103 103 ASN ASN A . n A 1 111 VAL 111 104 104 VAL VAL A . n B 1 1 MET 1 -6 ? ? ? B . n B 1 2 HIS 2 -5 ? ? ? B . n B 1 3 HIS 3 -4 ? ? ? B . n B 1 4 HIS 4 -3 ? ? ? B . n B 1 5 HIS 5 -2 ? ? ? B . n B 1 6 HIS 6 -1 ? ? ? B . n B 1 7 HIS 7 0 ? ? ? B . n B 1 8 MET 8 1 1 MET MET B . n B 1 9 VAL 9 2 2 VAL VAL B . n B 1 10 THR 10 3 3 THR THR B . n B 1 11 GLN 11 4 4 GLN GLN B . n B 1 12 LEU 12 5 5 LEU LEU B . n B 1 13 LYS 13 6 6 LYS LYS B . n B 1 14 SER 14 7 7 SER SER B . n B 1 15 ALA 15 8 8 ALA ALA B . n B 1 16 SER 16 9 9 SER SER B . n B 1 17 GLU 17 10 10 GLU GLU B . n B 1 18 TYR 18 11 11 TYR TYR B . n B 1 19 ASP 19 12 12 ASP ASP B . n B 1 20 SER 20 13 13 SER SER B . n B 1 21 ALA 21 14 14 ALA ALA B . n B 1 22 LEU 22 15 15 LEU LEU B . n B 1 23 ALA 23 16 16 ALA ALA B . n B 1 24 SER 24 17 17 SER SER B . n B 1 25 GLY 25 18 18 GLY GLY B . n B 1 26 ASP 26 19 19 ASP ASP B . n B 1 27 LYS 27 20 20 LYS LYS B . n B 1 28 LEU 28 21 21 LEU LEU B . n B 1 29 VAL 29 22 22 VAL VAL B . n B 1 30 VAL 30 23 23 VAL VAL B . n B 1 31 VAL 31 24 24 VAL VAL B . n B 1 32 ASP 32 25 25 ASP ASP B . n B 1 33 PHE 33 26 26 PHE PHE B . n B 1 34 PHE 34 27 27 PHE PHE B . n B 1 35 ALA 35 28 28 ALA ALA B . n B 1 36 THR 36 29 29 THR THR B . n B 1 37 TRP 37 30 30 TRP TRP B . n B 1 38 CYS 38 31 31 CYS CYS B . n B 1 39 GLY 39 32 32 GLY GLY B . n B 1 40 PRO 40 33 33 PRO PRO B . n B 1 41 CYS 41 34 34 CYS CYS B . n B 1 42 LYS 42 35 35 LYS LYS B . n B 1 43 MET 43 36 36 MET MET B . n B 1 44 ILE 44 37 37 ILE ILE B . n B 1 45 ALA 45 38 38 ALA ALA B . n B 1 46 PRO 46 39 39 PRO PRO B . n B 1 47 MET 47 40 40 MET MET B . n B 1 48 ILE 48 41 41 ILE ILE B . n B 1 49 GLU 49 42 42 GLU GLU B . n B 1 50 LYS 50 43 43 LYS LYS B . n B 1 51 PHE 51 44 44 PHE PHE B . n B 1 52 ALA 52 45 45 ALA ALA B . n B 1 53 GLU 53 46 46 GLU GLU B . n B 1 54 GLN 54 47 47 GLN GLN B . n B 1 55 TYR 55 48 48 TYR TYR B . n B 1 56 SER 56 49 49 SER SER B . n B 1 57 ASP 57 50 50 ASP ASP B . n B 1 58 ALA 58 51 51 ALA ALA B . n B 1 59 ALA 59 52 52 ALA ALA B . n B 1 60 PHE 60 53 53 PHE PHE B . n B 1 61 TYR 61 54 54 TYR TYR B . n B 1 62 LYS 62 55 55 LYS LYS B . n B 1 63 LEU 63 56 56 LEU LEU B . n B 1 64 ASP 64 57 57 ASP ASP B . n B 1 65 VAL 65 58 58 VAL VAL B . n B 1 66 ASP 66 59 59 ASP ASP B . n B 1 67 GLU 67 60 60 GLU GLU B . n B 1 68 VAL 68 61 61 VAL VAL B . n B 1 69 SER 69 62 62 SER SER B . n B 1 70 ASP 70 63 63 ASP ASP B . n B 1 71 VAL 71 64 64 VAL VAL B . n B 1 72 ALA 72 65 65 ALA ALA B . n B 1 73 GLN 73 66 66 GLN GLN B . n B 1 74 LYS 74 67 67 LYS LYS B . n B 1 75 ALA 75 68 68 ALA ALA B . n B 1 76 GLU 76 69 69 GLU GLU B . n B 1 77 VAL 77 70 70 VAL VAL B . n B 1 78 SER 78 71 71 SER SER B . n B 1 79 SER 79 72 72 SER SER B . n B 1 80 MET 80 73 73 MET MET B . n B 1 81 PRO 81 74 74 PRO PRO B . n B 1 82 THR 82 75 75 THR THR B . n B 1 83 LEU 83 76 76 LEU LEU B . n B 1 84 ILE 84 77 77 ILE ILE B . n B 1 85 PHE 85 78 78 PHE PHE B . n B 1 86 TYR 86 79 79 TYR TYR B . n B 1 87 LYS 87 80 80 LYS LYS B . n B 1 88 GLY 88 81 81 GLY GLY B . n B 1 89 GLY 89 82 82 GLY GLY B . n B 1 90 LYS 90 83 83 LYS LYS B . n B 1 91 GLU 91 84 84 GLU GLU B . n B 1 92 VAL 92 85 85 VAL VAL B . n B 1 93 THR 93 86 86 THR THR B . n B 1 94 ARG 94 87 87 ARG ARG B . n B 1 95 VAL 95 88 88 VAL VAL B . n B 1 96 VAL 96 89 89 VAL VAL B . n B 1 97 GLY 97 90 90 GLY GLY B . n B 1 98 ALA 98 91 91 ALA ALA B . n B 1 99 ASN 99 92 92 ASN ASN B . n B 1 100 PRO 100 93 93 PRO PRO B . n B 1 101 ALA 101 94 94 ALA ALA B . n B 1 102 ALA 102 95 95 ALA ALA B . n B 1 103 ILE 103 96 96 ILE ILE B . n B 1 104 LYS 104 97 97 LYS LYS B . n B 1 105 GLN 105 98 98 GLN GLN B . n B 1 106 ALA 106 99 99 ALA ALA B . n B 1 107 ILE 107 100 100 ILE ILE B . n B 1 108 ALA 108 101 101 ALA ALA B . n B 1 109 SER 109 102 102 SER SER B . n B 1 110 ASN 110 103 103 ASN ASN B . n B 1 111 VAL 111 104 104 VAL VAL B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 105 4 HOH HOH A . C 2 HOH 2 106 11 HOH HOH A . C 2 HOH 3 107 14 HOH HOH A . C 2 HOH 4 108 15 HOH HOH A . C 2 HOH 5 109 16 HOH HOH A . C 2 HOH 6 110 17 HOH HOH A . C 2 HOH 7 111 18 HOH HOH A . C 2 HOH 8 112 20 HOH HOH A . C 2 HOH 9 113 21 HOH HOH A . C 2 HOH 10 114 23 HOH HOH A . C 2 HOH 11 115 26 HOH HOH A . C 2 HOH 12 116 28 HOH HOH A . C 2 HOH 13 117 31 HOH HOH A . C 2 HOH 14 118 32 HOH HOH A . C 2 HOH 15 119 33 HOH HOH A . C 2 HOH 16 120 34 HOH HOH A . C 2 HOH 17 121 35 HOH HOH A . C 2 HOH 18 122 36 HOH HOH A . C 2 HOH 19 123 39 HOH HOH A . C 2 HOH 20 124 40 HOH HOH A . C 2 HOH 21 125 41 HOH HOH A . C 2 HOH 22 126 42 HOH HOH A . C 2 HOH 23 127 52 HOH HOH A . C 2 HOH 24 128 53 HOH HOH A . C 2 HOH 25 129 55 HOH HOH A . C 2 HOH 26 130 56 HOH HOH A . C 2 HOH 27 131 67 HOH HOH A . C 2 HOH 28 132 68 HOH HOH A . C 2 HOH 29 133 71 HOH HOH A . C 2 HOH 30 134 72 HOH HOH A . C 2 HOH 31 135 73 HOH HOH A . C 2 HOH 32 136 77 HOH HOH A . C 2 HOH 33 137 78 HOH HOH A . C 2 HOH 34 138 79 HOH HOH A . C 2 HOH 35 139 82 HOH HOH A . C 2 HOH 36 140 85 HOH HOH A . C 2 HOH 37 141 88 HOH HOH A . D 2 HOH 1 105 3 HOH HOH B . D 2 HOH 2 106 5 HOH HOH B . D 2 HOH 3 107 6 HOH HOH B . D 2 HOH 4 108 7 HOH HOH B . D 2 HOH 5 109 8 HOH HOH B . D 2 HOH 6 110 9 HOH HOH B . D 2 HOH 7 111 10 HOH HOH B . D 2 HOH 8 112 12 HOH HOH B . D 2 HOH 9 113 13 HOH HOH B . D 2 HOH 10 114 19 HOH HOH B . D 2 HOH 11 115 22 HOH HOH B . D 2 HOH 12 116 25 HOH HOH B . D 2 HOH 13 117 27 HOH HOH B . D 2 HOH 14 118 29 HOH HOH B . D 2 HOH 15 119 30 HOH HOH B . D 2 HOH 16 120 38 HOH HOH B . D 2 HOH 17 121 43 HOH HOH B . D 2 HOH 18 122 44 HOH HOH B . D 2 HOH 19 123 45 HOH HOH B . D 2 HOH 20 124 46 HOH HOH B . D 2 HOH 21 125 47 HOH HOH B . D 2 HOH 22 126 48 HOH HOH B . D 2 HOH 23 127 49 HOH HOH B . D 2 HOH 24 128 50 HOH HOH B . D 2 HOH 25 129 57 HOH HOH B . D 2 HOH 26 130 58 HOH HOH B . D 2 HOH 27 131 59 HOH HOH B . D 2 HOH 28 132 60 HOH HOH B . D 2 HOH 29 133 61 HOH HOH B . D 2 HOH 30 134 62 HOH HOH B . D 2 HOH 31 135 63 HOH HOH B . D 2 HOH 32 136 64 HOH HOH B . D 2 HOH 33 137 66 HOH HOH B . D 2 HOH 34 138 69 HOH HOH B . D 2 HOH 35 139 70 HOH HOH B . D 2 HOH 36 140 74 HOH HOH B . D 2 HOH 37 141 75 HOH HOH B . D 2 HOH 38 142 76 HOH HOH B . D 2 HOH 39 143 83 HOH HOH B . D 2 HOH 40 144 84 HOH HOH B . D 2 HOH 41 145 86 HOH HOH B . D 2 HOH 42 146 87 HOH HOH B . D 2 HOH 43 147 89 HOH HOH B . D 2 HOH 44 148 90 HOH HOH B . D 2 HOH 45 149 93 HOH HOH B . D 2 HOH 46 150 94 HOH HOH B . D 2 HOH 47 151 95 HOH HOH B . D 2 HOH 48 152 96 HOH HOH B . D 2 HOH 49 153 98 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C 2 1 B,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-12-06 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0005 ? 1 MAR345 'data collection' . ? 2 MOSFLM 'data reduction' . ? 3 MOLREP phasing . ? 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 N _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 MET _pdbx_validate_close_contact.auth_seq_id_1 1 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 150 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.05 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CE _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 LYS _pdbx_validate_rmsd_bond.auth_seq_id_1 43 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 NZ _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 LYS _pdbx_validate_rmsd_bond.auth_seq_id_2 43 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.666 _pdbx_validate_rmsd_bond.bond_target_value 1.486 _pdbx_validate_rmsd_bond.bond_deviation 0.180 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.025 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 19 ? ? 64.85 -38.44 2 1 VAL A 61 ? ? -118.61 54.21 3 1 TYR B 48 ? ? -102.85 74.19 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -6 ? A MET 1 2 1 Y 1 A HIS -5 ? A HIS 2 3 1 Y 1 A HIS -4 ? A HIS 3 4 1 Y 1 A HIS -3 ? A HIS 4 5 1 Y 1 A HIS -2 ? A HIS 5 6 1 Y 1 A HIS -1 ? A HIS 6 7 1 Y 1 A HIS 0 ? A HIS 7 8 1 Y 1 B MET -6 ? B MET 1 9 1 Y 1 B HIS -5 ? B HIS 2 10 1 Y 1 B HIS -4 ? B HIS 3 11 1 Y 1 B HIS -3 ? B HIS 4 12 1 Y 1 B HIS -2 ? B HIS 5 13 1 Y 1 B HIS -1 ? B HIS 6 14 1 Y 1 B HIS 0 ? B HIS 7 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #