data_2FKH # _entry.id 2FKH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2FKH pdb_00002fkh 10.2210/pdb2fkh/pdb NDB PD0761 ? ? RCSB RCSB035984 ? ? WWPDB D_1000035984 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1YNM 'The same protein but not complexed with cognate DNA and metal ion.' unspecified PDB 2FKC . unspecified PDB 2FL3 . unspecified PDB 2FLC . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2FKH _pdbx_database_status.recvd_initial_deposition_date 2006-01-04 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Horton, J.R.' _audit_author.pdbx_ordinal 1 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'DNA nicking by HinP1I endonuclease: bending, base flipping and minor groove expansion.' 'Nucleic Acids Res.' 34 939 948 2006 NARHAD UK 0305-1048 0389 ? 16473850 10.1093/nar/gkj484 1 'Structure of HinP1I endonuclease reveals a striking similarity to the monomeric restriction enzyme MspI' 'Nucleic Acids Res.' 33 1892 1901 2005 NARHAD UK 0305-1048 0389 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Horton, J.R.' 1 ? primary 'Zhang, X.' 2 ? primary 'Maunus, R.' 3 ? primary 'Yang, Z.' 4 ? primary 'Wilson, G.G.' 5 ? primary 'Roberts, R.J.' 6 ? primary 'Cheng, X.' 7 ? 1 'Yang, Z.' 8 ? 1 'Horton, J.R.' 9 ? 1 'Maunus, R.' 10 ? 1 'Wilson, G.G.' 11 ? 1 'Roberts, R.J.' 12 ? 1 'Cheng, X.' 13 ? # _cell.entry_id 2FKH _cell.length_a 109.134 _cell.length_b 109.134 _cell.length_c 113.269 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2FKH _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*CP*CP*AP*GP*CP*GP*CP*TP*GP*G)-3'" 3045.992 2 ? ? ? ? 2 polymer man 'R.HinP1I Restriction Endonuclease' 28791.668 1 3.1.21.4 ? ? ? 3 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 4 water nat water 18.015 12 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DC)(DC)(DA)(DG)(DC)(DG)(DC)(DT)(DG)(DG)' CCAGCGCTGG E,F ? 2 'polypeptide(L)' no no ;MNLVELGSKTAKDGFKNEKDIADRFENWKENSEAQDWLVTMGHNLDEIKSVKAVVLSGYKSDINVQVLVFYKDALDIHNI QVKLVSNKRGFNQIDKHWLAHYQEMWKFDDNLLRILRHFTGELPPYHSNTKDKRRMFMTEFSQEEQNIVLNWLEKNRVLV LTDILRGRGDFAAEWVLVAQKVSNNARWILRNINEVLQHYGSGDISLSPRGSINFGRVTIQRKGGDNGRETANMLQFKID PTELFDI ; ;MNLVELGSKTAKDGFKNEKDIADRFENWKENSEAQDWLVTMGHNLDEIKSVKAVVLSGYKSDINVQVLVFYKDALDIHNI QVKLVSNKRGFNQIDKHWLAHYQEMWKFDDNLLRILRHFTGELPPYHSNTKDKRRMFMTEFSQEEQNIVLNWLEKNRVLV LTDILRGRGDFAAEWVLVAQKVSNNARWILRNINEVLQHYGSGDISLSPRGSINFGRVTIQRKGGDNGRETANMLQFKID PTELFDI ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 DA n 1 4 DG n 1 5 DC n 1 6 DG n 1 7 DC n 1 8 DT n 1 9 DG n 1 10 DG n 2 1 MET n 2 2 ASN n 2 3 LEU n 2 4 VAL n 2 5 GLU n 2 6 LEU n 2 7 GLY n 2 8 SER n 2 9 LYS n 2 10 THR n 2 11 ALA n 2 12 LYS n 2 13 ASP n 2 14 GLY n 2 15 PHE n 2 16 LYS n 2 17 ASN n 2 18 GLU n 2 19 LYS n 2 20 ASP n 2 21 ILE n 2 22 ALA n 2 23 ASP n 2 24 ARG n 2 25 PHE n 2 26 GLU n 2 27 ASN n 2 28 TRP n 2 29 LYS n 2 30 GLU n 2 31 ASN n 2 32 SER n 2 33 GLU n 2 34 ALA n 2 35 GLN n 2 36 ASP n 2 37 TRP n 2 38 LEU n 2 39 VAL n 2 40 THR n 2 41 MET n 2 42 GLY n 2 43 HIS n 2 44 ASN n 2 45 LEU n 2 46 ASP n 2 47 GLU n 2 48 ILE n 2 49 LYS n 2 50 SER n 2 51 VAL n 2 52 LYS n 2 53 ALA n 2 54 VAL n 2 55 VAL n 2 56 LEU n 2 57 SER n 2 58 GLY n 2 59 TYR n 2 60 LYS n 2 61 SER n 2 62 ASP n 2 63 ILE n 2 64 ASN n 2 65 VAL n 2 66 GLN n 2 67 VAL n 2 68 LEU n 2 69 VAL n 2 70 PHE n 2 71 TYR n 2 72 LYS n 2 73 ASP n 2 74 ALA n 2 75 LEU n 2 76 ASP n 2 77 ILE n 2 78 HIS n 2 79 ASN n 2 80 ILE n 2 81 GLN n 2 82 VAL n 2 83 LYS n 2 84 LEU n 2 85 VAL n 2 86 SER n 2 87 ASN n 2 88 LYS n 2 89 ARG n 2 90 GLY n 2 91 PHE n 2 92 ASN n 2 93 GLN n 2 94 ILE n 2 95 ASP n 2 96 LYS n 2 97 HIS n 2 98 TRP n 2 99 LEU n 2 100 ALA n 2 101 HIS n 2 102 TYR n 2 103 GLN n 2 104 GLU n 2 105 MET n 2 106 TRP n 2 107 LYS n 2 108 PHE n 2 109 ASP n 2 110 ASP n 2 111 ASN n 2 112 LEU n 2 113 LEU n 2 114 ARG n 2 115 ILE n 2 116 LEU n 2 117 ARG n 2 118 HIS n 2 119 PHE n 2 120 THR n 2 121 GLY n 2 122 GLU n 2 123 LEU n 2 124 PRO n 2 125 PRO n 2 126 TYR n 2 127 HIS n 2 128 SER n 2 129 ASN n 2 130 THR n 2 131 LYS n 2 132 ASP n 2 133 LYS n 2 134 ARG n 2 135 ARG n 2 136 MET n 2 137 PHE n 2 138 MET n 2 139 THR n 2 140 GLU n 2 141 PHE n 2 142 SER n 2 143 GLN n 2 144 GLU n 2 145 GLU n 2 146 GLN n 2 147 ASN n 2 148 ILE n 2 149 VAL n 2 150 LEU n 2 151 ASN n 2 152 TRP n 2 153 LEU n 2 154 GLU n 2 155 LYS n 2 156 ASN n 2 157 ARG n 2 158 VAL n 2 159 LEU n 2 160 VAL n 2 161 LEU n 2 162 THR n 2 163 ASP n 2 164 ILE n 2 165 LEU n 2 166 ARG n 2 167 GLY n 2 168 ARG n 2 169 GLY n 2 170 ASP n 2 171 PHE n 2 172 ALA n 2 173 ALA n 2 174 GLU n 2 175 TRP n 2 176 VAL n 2 177 LEU n 2 178 VAL n 2 179 ALA n 2 180 GLN n 2 181 LYS n 2 182 VAL n 2 183 SER n 2 184 ASN n 2 185 ASN n 2 186 ALA n 2 187 ARG n 2 188 TRP n 2 189 ILE n 2 190 LEU n 2 191 ARG n 2 192 ASN n 2 193 ILE n 2 194 ASN n 2 195 GLU n 2 196 VAL n 2 197 LEU n 2 198 GLN n 2 199 HIS n 2 200 TYR n 2 201 GLY n 2 202 SER n 2 203 GLY n 2 204 ASP n 2 205 ILE n 2 206 SER n 2 207 LEU n 2 208 SER n 2 209 PRO n 2 210 ARG n 2 211 GLY n 2 212 SER n 2 213 ILE n 2 214 ASN n 2 215 PHE n 2 216 GLY n 2 217 ARG n 2 218 VAL n 2 219 THR n 2 220 ILE n 2 221 GLN n 2 222 ARG n 2 223 LYS n 2 224 GLY n 2 225 GLY n 2 226 ASP n 2 227 ASN n 2 228 GLY n 2 229 ARG n 2 230 GLU n 2 231 THR n 2 232 ALA n 2 233 ASN n 2 234 MET n 2 235 LEU n 2 236 GLN n 2 237 PHE n 2 238 LYS n 2 239 ILE n 2 240 ASP n 2 241 PRO n 2 242 THR n 2 243 GLU n 2 244 LEU n 2 245 PHE n 2 246 ASP n 2 247 ILE n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Haemophilus _entity_src_gen.pdbx_gene_src_gene hinP1IR _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Haemophilus influenzae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 727 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain PR1 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pUC19 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'Synthesized Self-Annealing Oligonucleotide' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 GB AAW33811 57116674 2 ;MNLVELGSKTAKDGFKNEKDIADRFENWKENSEAQDWLVTMGHNLDEIKSVKAVVLSGYKSDINVQVLVFYKDALDIHNI QVKLVSNKRGFNQIDKHWLAHYQEMWKFDDNLLRILRHFTGELPPYHSNTKDKRRMFMTEFSQEEQNIVLNWLEKNRVLV LTDILRGRGDFAAEWVLVAQKVSNNARWILRNINEVLQHYGSGDISLSPRGSINFGRVTIQRKGGDNGRETANMLQFKID PTELFDI ; 1 ? 2 PDB 2FKH 2FKH 1 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2FKH B 1 ? 247 ? 57116674 1 ? 247 ? 1 247 2 2 2FKH E 1 ? 10 ? 2FKH 1 ? 10 ? 1 10 3 2 2FKH F 1 ? 10 ? 2FKH 11 ? 20 ? 11 20 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2FKH _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.77 _exptl_crystal.density_percent_sol 55.56 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '30% PEG4000, 100mM Tris pH 8.5, 0.2M Li2SO4, 20mM CaCl2, VAPOR DIFFUSION, HANGING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 PEG4000 ? ? ? 1 2 1 Tris ? ? ? 1 3 1 Li2SO4 ? ? ? 1 4 1 CaCl2 ? ? ? 1 5 1 H2O ? ? ? 1 6 2 PEG4000 ? ? ? 1 7 2 CaCl2 ? ? ? 1 8 2 Li2SO4 ? ? ? 1 9 2 H2O ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2005-02-28 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 220' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.99997 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.99997 # _reflns.entry_id 2FKH _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F -3 _reflns.d_resolution_low 31.51 _reflns.d_resolution_high 3.09 _reflns.number_obs 7757 _reflns.number_all 7757 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.071 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 17.1 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 16.8 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 3.09 _reflns_shell.d_res_low 3.20 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2FKH _refine.ls_number_reflns_obs 7315 _refine.ls_number_reflns_all 7757 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 31.51 _refine.ls_d_res_high 3.09 _refine.ls_percent_reflns_obs 94.5 _refine.ls_R_factor_obs 0.225 _refine.ls_R_factor_all 0.227 _refine.ls_R_factor_R_work 0.22 _refine.ls_R_factor_R_free 0.313 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 392 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 41.3 _refine.aniso_B[1][1] -3.02 _refine.aniso_B[2][2] -3.02 _refine.aniso_B[3][3] 6.03 _refine.aniso_B[1][2] 8.40 _refine.aniso_B[1][3] 0.0 _refine.aniso_B[2][3] 0.0 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'pdb entry 1YNM' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ISOTROPIC _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2FKH _refine_analyze.Luzzati_coordinate_error_obs 0.38 _refine_analyze.Luzzati_sigma_a_obs 0.17 _refine_analyze.Luzzati_d_res_low_obs 31.51 _refine_analyze.Luzzati_coordinate_error_free 0.55 _refine_analyze.Luzzati_sigma_a_free 0.17 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1958 _refine_hist.pdbx_number_atoms_nucleic_acid 404 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 12 _refine_hist.number_atoms_total 2376 _refine_hist.d_res_high 3.09 _refine_hist.d_res_low 31.51 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.3 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 22.6 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 2.9 ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 2FKH _struct.title 'Crystal Form II of Pre-Reactive Complex of Restriction Endonuclease HinP1I with Cognate DNA and Calcium Ions' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2FKH _struct_keywords.pdbx_keywords HYDROLASE/DNA _struct_keywords.text 'RESTRICTION ENDONUCLEASE, PROTEIN DIMERIZATON, DNA SUPERHELIX, PROTEIN-DNA-METAL ION COMPLEX, HYDROLASE-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 4 ? G N N 4 ? H N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 MET C 1 ? ASN C 27 ? MET B 1 ASN B 27 1 ? 27 HELX_P HELX_P2 2 SER C 32 ? MET C 41 ? SER B 32 MET B 41 1 ? 10 HELX_P HELX_P3 3 TRP C 98 ? LYS C 107 ? TRP B 98 LYS B 107 1 ? 10 HELX_P HELX_P4 4 ASP C 109 ? GLY C 121 ? ASP B 109 GLY B 121 1 ? 13 HELX_P HELX_P5 5 PHE C 137 ? PHE C 141 ? PHE B 137 PHE B 141 5 ? 5 HELX_P HELX_P6 6 SER C 142 ? ASN C 156 ? SER B 142 ASN B 156 1 ? 15 HELX_P HELX_P7 7 ASN C 156 ? ARG C 166 ? ASN B 156 ARG B 166 1 ? 11 HELX_P HELX_P8 8 ILE C 193 ? GLY C 201 ? ILE B 193 GLY B 201 1 ? 9 HELX_P HELX_P9 9 GLY C 225 ? ASN C 233 ? GLY B 225 ASN B 233 5 ? 9 HELX_P HELX_P10 10 ASP C 240 ? ASP C 246 ? ASP B 240 ASP B 246 5 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DG 4 "O3'" ? ? ? 1_555 D CA . CA ? ? E DG 4 E CA 22 1_555 ? ? ? ? ? ? ? 2.606 ? ? metalc2 metalc ? ? A DC 5 OP1 ? ? ? 1_555 D CA . CA ? ? E DC 5 E CA 22 1_555 ? ? ? ? ? ? ? 2.788 ? ? metalc3 metalc ? ? A DC 5 OP1 ? ? ? 1_555 E CA . CA ? ? E DC 5 B CA 248 1_555 ? ? ? ? ? ? ? 2.225 ? ? metalc4 metalc ? ? D CA . CA ? ? ? 1_555 C ASP 62 OD1 ? ? E CA 22 B ASP 62 1_555 ? ? ? ? ? ? ? 2.453 ? ? metalc5 metalc ? ? C ASP 62 OD2 ? ? ? 1_555 E CA . CA ? ? B ASP 62 B CA 248 1_555 ? ? ? ? ? ? ? 2.584 ? ? metalc6 metalc ? ? C GLN 81 OE1 ? ? ? 1_555 E CA . CA ? ? B GLN 81 B CA 248 1_555 ? ? ? ? ? ? ? 2.548 ? ? metalc7 metalc ? ? C VAL 82 O ? ? ? 1_555 E CA . CA ? ? B VAL 82 B CA 248 1_555 ? ? ? ? ? ? ? 2.215 ? ? metalc8 metalc ? ? E CA . CA ? ? ? 1_555 H HOH . O ? ? B CA 248 B HOH 249 1_555 ? ? ? ? ? ? ? 2.768 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 10 N1 ? ? E DC 1 F DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 10 O6 ? ? E DC 1 F DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 10 N2 ? ? E DC 1 F DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 9 N1 ? ? E DC 2 F DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 9 O6 ? ? E DC 2 F DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 9 N2 ? ? E DC 2 F DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 7 N3 ? ? E DG 4 F DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 7 O2 ? ? E DG 4 F DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 7 N4 ? ? E DG 4 F DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 6 N1 ? ? E DC 5 F DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 6 O6 ? ? E DC 5 F DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 6 N2 ? ? E DC 5 F DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 5 N3 ? ? E DG 6 F DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 5 O2 ? ? E DG 6 F DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 5 N4 ? ? E DG 6 F DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 7 N3 ? ? ? 1_555 B DG 4 N1 ? ? E DC 7 F DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 7 N4 ? ? ? 1_555 B DG 4 O6 ? ? E DC 7 F DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 7 O2 ? ? ? 1_555 B DG 4 N2 ? ? E DC 7 F DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 3 N1 ? ? E DT 8 F DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 3 N6 ? ? E DT 8 F DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 2 N3 ? ? E DG 9 F DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 2 O2 ? ? E DG 9 F DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 2 N4 ? ? E DG 9 F DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 1 N3 ? ? E DG 10 F DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 1 O2 ? ? E DG 10 F DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 1 N4 ? ? E DG 10 F DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE C 48 ? VAL C 55 ? ILE B 48 VAL B 55 A 2 ILE C 63 ? VAL C 69 ? ILE B 63 VAL B 69 A 3 ASP C 76 ? VAL C 85 ? ASP B 76 VAL B 85 A 4 TRP C 175 ? VAL C 182 ? TRP B 175 VAL B 182 A 5 ASN C 185 ? ASN C 192 ? ASN B 185 ASN B 192 B 1 ASN C 92 ? HIS C 97 ? ASN B 92 HIS B 97 B 2 LEU C 235 ? ILE C 239 ? LEU B 235 ILE B 239 B 3 VAL C 218 ? ARG C 222 ? VAL B 218 ARG B 222 B 4 ILE C 213 ? PHE C 215 ? ILE B 213 PHE B 215 B 5 ILE C 205 ? LEU C 207 ? ILE B 205 LEU B 207 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS C 49 ? N LYS B 49 O LEU C 68 ? O LEU B 68 A 2 3 N VAL C 65 ? N VAL B 65 O HIS C 78 ? O HIS B 78 A 3 4 N GLN C 81 ? N GLN B 81 O LEU C 177 ? O LEU B 177 A 4 5 N VAL C 176 ? N VAL B 176 O ARG C 191 ? O ARG B 191 B 1 2 N ILE C 94 ? N ILE B 94 O PHE C 237 ? O PHE B 237 B 2 3 O LYS C 238 ? O LYS B 238 N THR C 219 ? N THR B 219 B 3 4 O VAL C 218 ? O VAL B 218 N PHE C 215 ? N PHE B 215 B 4 5 O ASN C 214 ? O ASN B 214 N SER C 206 ? N SER B 206 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B CA 248 ? 5 'BINDING SITE FOR RESIDUE CA B 248' AC2 Software E CA 22 ? 4 'BINDING SITE FOR RESIDUE CA E 22' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ASP C 62 ? ASP B 62 . ? 1_555 ? 2 AC1 5 GLN C 81 ? GLN B 81 . ? 1_555 ? 3 AC1 5 VAL C 82 ? VAL B 82 . ? 1_555 ? 4 AC1 5 HOH H . ? HOH B 249 . ? 1_555 ? 5 AC1 5 DC A 5 ? DC E 5 . ? 1_555 ? 6 AC2 4 TYR C 59 ? TYR B 59 . ? 1_555 ? 7 AC2 4 ASP C 62 ? ASP B 62 . ? 1_555 ? 8 AC2 4 DG A 4 ? DG E 4 . ? 1_555 ? 9 AC2 4 DC A 5 ? DC E 5 . ? 1_555 ? # _database_PDB_matrix.entry_id 2FKH _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2FKH _atom_sites.fract_transf_matrix[1][1] 0.009163 _atom_sites.fract_transf_matrix[1][2] 0.005290 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010581 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008829 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C E . n A 1 2 DC 2 2 2 DC C E . n A 1 3 DA 3 3 3 DA A E . n A 1 4 DG 4 4 4 DG G E . n A 1 5 DC 5 5 5 DC C E . n A 1 6 DG 6 6 6 DG G E . n A 1 7 DC 7 7 7 DC C E . n A 1 8 DT 8 8 8 DT T E . n A 1 9 DG 9 9 9 DG G E . n A 1 10 DG 10 10 10 DG G E . n B 1 1 DC 1 11 11 DC C F . n B 1 2 DC 2 12 12 DC C F . n B 1 3 DA 3 13 13 DA A F . n B 1 4 DG 4 14 14 DG G F . n B 1 5 DC 5 15 15 DC C F . n B 1 6 DG 6 16 16 DG G F . n B 1 7 DC 7 17 17 DC C F . n B 1 8 DT 8 18 18 DT T F . n B 1 9 DG 9 19 19 DG G F . n B 1 10 DG 10 20 20 DG G F . n C 2 1 MET 1 1 1 MET MET B . n C 2 2 ASN 2 2 2 ASN ASN B . n C 2 3 LEU 3 3 3 LEU LEU B . n C 2 4 VAL 4 4 4 VAL VAL B . n C 2 5 GLU 5 5 5 GLU GLU B . n C 2 6 LEU 6 6 6 LEU LEU B . n C 2 7 GLY 7 7 7 GLY GLY B . n C 2 8 SER 8 8 8 SER SER B . n C 2 9 LYS 9 9 9 LYS LYS B . n C 2 10 THR 10 10 10 THR THR B . n C 2 11 ALA 11 11 11 ALA ALA B . n C 2 12 LYS 12 12 12 LYS LYS B . n C 2 13 ASP 13 13 13 ASP ASP B . n C 2 14 GLY 14 14 14 GLY GLY B . n C 2 15 PHE 15 15 15 PHE PHE B . n C 2 16 LYS 16 16 16 LYS LYS B . n C 2 17 ASN 17 17 17 ASN ASN B . n C 2 18 GLU 18 18 18 GLU GLU B . n C 2 19 LYS 19 19 19 LYS LYS B . n C 2 20 ASP 20 20 20 ASP ASP B . n C 2 21 ILE 21 21 21 ILE ILE B . n C 2 22 ALA 22 22 22 ALA ALA B . n C 2 23 ASP 23 23 23 ASP ASP B . n C 2 24 ARG 24 24 24 ARG ARG B . n C 2 25 PHE 25 25 25 PHE PHE B . n C 2 26 GLU 26 26 26 GLU GLU B . n C 2 27 ASN 27 27 27 ASN ASN B . n C 2 28 TRP 28 28 28 TRP TRP B . n C 2 29 LYS 29 29 29 LYS LYS B . n C 2 30 GLU 30 30 30 GLU GLU B . n C 2 31 ASN 31 31 31 ASN ASN B . n C 2 32 SER 32 32 32 SER SER B . n C 2 33 GLU 33 33 33 GLU GLU B . n C 2 34 ALA 34 34 34 ALA ALA B . n C 2 35 GLN 35 35 35 GLN GLN B . n C 2 36 ASP 36 36 36 ASP ASP B . n C 2 37 TRP 37 37 37 TRP TRP B . n C 2 38 LEU 38 38 38 LEU LEU B . n C 2 39 VAL 39 39 39 VAL VAL B . n C 2 40 THR 40 40 40 THR THR B . n C 2 41 MET 41 41 41 MET MET B . n C 2 42 GLY 42 42 42 GLY GLY B . n C 2 43 HIS 43 43 43 HIS HIS B . n C 2 44 ASN 44 44 44 ASN ASN B . n C 2 45 LEU 45 45 45 LEU LEU B . n C 2 46 ASP 46 46 46 ASP ASP B . n C 2 47 GLU 47 47 47 GLU GLU B . n C 2 48 ILE 48 48 48 ILE ILE B . n C 2 49 LYS 49 49 49 LYS LYS B . n C 2 50 SER 50 50 50 SER SER B . n C 2 51 VAL 51 51 51 VAL VAL B . n C 2 52 LYS 52 52 52 LYS LYS B . n C 2 53 ALA 53 53 53 ALA ALA B . n C 2 54 VAL 54 54 54 VAL VAL B . n C 2 55 VAL 55 55 55 VAL VAL B . n C 2 56 LEU 56 56 56 LEU LEU B . n C 2 57 SER 57 57 57 SER SER B . n C 2 58 GLY 58 58 58 GLY GLY B . n C 2 59 TYR 59 59 59 TYR TYR B . n C 2 60 LYS 60 60 60 LYS LYS B . n C 2 61 SER 61 61 61 SER SER B . n C 2 62 ASP 62 62 62 ASP ASP B . n C 2 63 ILE 63 63 63 ILE ILE B . n C 2 64 ASN 64 64 64 ASN ASN B . n C 2 65 VAL 65 65 65 VAL VAL B . n C 2 66 GLN 66 66 66 GLN GLN B . n C 2 67 VAL 67 67 67 VAL VAL B . n C 2 68 LEU 68 68 68 LEU LEU B . n C 2 69 VAL 69 69 69 VAL VAL B . n C 2 70 PHE 70 70 70 PHE PHE B . n C 2 71 TYR 71 71 71 TYR TYR B . n C 2 72 LYS 72 72 72 LYS LYS B . n C 2 73 ASP 73 73 73 ASP ASP B . n C 2 74 ALA 74 74 74 ALA ALA B . n C 2 75 LEU 75 75 75 LEU LEU B . n C 2 76 ASP 76 76 76 ASP ASP B . n C 2 77 ILE 77 77 77 ILE ILE B . n C 2 78 HIS 78 78 78 HIS HIS B . n C 2 79 ASN 79 79 79 ASN ASN B . n C 2 80 ILE 80 80 80 ILE ILE B . n C 2 81 GLN 81 81 81 GLN GLN B . n C 2 82 VAL 82 82 82 VAL VAL B . n C 2 83 LYS 83 83 83 LYS LYS B . n C 2 84 LEU 84 84 84 LEU LEU B . n C 2 85 VAL 85 85 85 VAL VAL B . n C 2 86 SER 86 86 86 SER SER B . n C 2 87 ASN 87 87 87 ASN ASN B . n C 2 88 LYS 88 88 88 LYS LYS B . n C 2 89 ARG 89 89 89 ARG ARG B . n C 2 90 GLY 90 90 90 GLY GLY B . n C 2 91 PHE 91 91 91 PHE PHE B . n C 2 92 ASN 92 92 92 ASN ASN B . n C 2 93 GLN 93 93 93 GLN GLN B . n C 2 94 ILE 94 94 94 ILE ILE B . n C 2 95 ASP 95 95 95 ASP ASP B . n C 2 96 LYS 96 96 96 LYS LYS B . n C 2 97 HIS 97 97 97 HIS HIS B . n C 2 98 TRP 98 98 98 TRP TRP B . n C 2 99 LEU 99 99 99 LEU LEU B . n C 2 100 ALA 100 100 100 ALA ALA B . n C 2 101 HIS 101 101 101 HIS HIS B . n C 2 102 TYR 102 102 102 TYR TYR B . n C 2 103 GLN 103 103 103 GLN GLN B . n C 2 104 GLU 104 104 104 GLU GLU B . n C 2 105 MET 105 105 105 MET MET B . n C 2 106 TRP 106 106 106 TRP TRP B . n C 2 107 LYS 107 107 107 LYS LYS B . n C 2 108 PHE 108 108 108 PHE PHE B . n C 2 109 ASP 109 109 109 ASP ASP B . n C 2 110 ASP 110 110 110 ASP ASP B . n C 2 111 ASN 111 111 111 ASN ASN B . n C 2 112 LEU 112 112 112 LEU LEU B . n C 2 113 LEU 113 113 113 LEU LEU B . n C 2 114 ARG 114 114 114 ARG ARG B . n C 2 115 ILE 115 115 115 ILE ILE B . n C 2 116 LEU 116 116 116 LEU LEU B . n C 2 117 ARG 117 117 117 ARG ARG B . n C 2 118 HIS 118 118 118 HIS HIS B . n C 2 119 PHE 119 119 119 PHE PHE B . n C 2 120 THR 120 120 120 THR THR B . n C 2 121 GLY 121 121 121 GLY GLY B . n C 2 122 GLU 122 122 122 GLU GLU B . n C 2 123 LEU 123 123 123 LEU LEU B . n C 2 124 PRO 124 124 124 PRO PRO B . n C 2 125 PRO 125 125 125 PRO PRO B . n C 2 126 TYR 126 126 126 TYR TYR B . n C 2 127 HIS 127 127 127 HIS HIS B . n C 2 128 SER 128 128 128 SER SER B . n C 2 129 ASN 129 129 129 ASN ASN B . n C 2 130 THR 130 130 130 THR THR B . n C 2 131 LYS 131 131 131 LYS LYS B . n C 2 132 ASP 132 132 132 ASP ASP B . n C 2 133 LYS 133 133 133 LYS LYS B . n C 2 134 ARG 134 134 134 ARG ARG B . n C 2 135 ARG 135 135 135 ARG ARG B . n C 2 136 MET 136 136 136 MET MET B . n C 2 137 PHE 137 137 137 PHE PHE B . n C 2 138 MET 138 138 138 MET MET B . n C 2 139 THR 139 139 139 THR THR B . n C 2 140 GLU 140 140 140 GLU GLU B . n C 2 141 PHE 141 141 141 PHE PHE B . n C 2 142 SER 142 142 142 SER SER B . n C 2 143 GLN 143 143 143 GLN GLN B . n C 2 144 GLU 144 144 144 GLU GLU B . n C 2 145 GLU 145 145 145 GLU GLU B . n C 2 146 GLN 146 146 146 GLN GLN B . n C 2 147 ASN 147 147 147 ASN ASN B . n C 2 148 ILE 148 148 148 ILE ILE B . n C 2 149 VAL 149 149 149 VAL VAL B . n C 2 150 LEU 150 150 150 LEU LEU B . n C 2 151 ASN 151 151 151 ASN ASN B . n C 2 152 TRP 152 152 152 TRP TRP B . n C 2 153 LEU 153 153 153 LEU LEU B . n C 2 154 GLU 154 154 154 GLU GLU B . n C 2 155 LYS 155 155 155 LYS LYS B . n C 2 156 ASN 156 156 156 ASN ASN B . n C 2 157 ARG 157 157 157 ARG ARG B . n C 2 158 VAL 158 158 158 VAL VAL B . n C 2 159 LEU 159 159 159 LEU LEU B . n C 2 160 VAL 160 160 160 VAL VAL B . n C 2 161 LEU 161 161 161 LEU LEU B . n C 2 162 THR 162 162 162 THR THR B . n C 2 163 ASP 163 163 163 ASP ASP B . n C 2 164 ILE 164 164 164 ILE ILE B . n C 2 165 LEU 165 165 165 LEU LEU B . n C 2 166 ARG 166 166 166 ARG ARG B . n C 2 167 GLY 167 167 167 GLY GLY B . n C 2 168 ARG 168 168 168 ARG ARG B . n C 2 169 GLY 169 169 169 GLY GLY B . n C 2 170 ASP 170 170 170 ASP ASP B . n C 2 171 PHE 171 171 171 PHE PHE B . n C 2 172 ALA 172 172 172 ALA ALA B . n C 2 173 ALA 173 173 173 ALA ALA B . n C 2 174 GLU 174 174 174 GLU GLU B . n C 2 175 TRP 175 175 175 TRP TRP B . n C 2 176 VAL 176 176 176 VAL VAL B . n C 2 177 LEU 177 177 177 LEU LEU B . n C 2 178 VAL 178 178 178 VAL VAL B . n C 2 179 ALA 179 179 179 ALA ALA B . n C 2 180 GLN 180 180 180 GLN GLN B . n C 2 181 LYS 181 181 181 LYS LYS B . n C 2 182 VAL 182 182 182 VAL VAL B . n C 2 183 SER 183 183 183 SER SER B . n C 2 184 ASN 184 184 184 ASN ASN B . n C 2 185 ASN 185 185 185 ASN ASN B . n C 2 186 ALA 186 186 186 ALA ALA B . n C 2 187 ARG 187 187 187 ARG ARG B . n C 2 188 TRP 188 188 188 TRP TRP B . n C 2 189 ILE 189 189 189 ILE ILE B . n C 2 190 LEU 190 190 190 LEU LEU B . n C 2 191 ARG 191 191 191 ARG ARG B . n C 2 192 ASN 192 192 192 ASN ASN B . n C 2 193 ILE 193 193 193 ILE ILE B . n C 2 194 ASN 194 194 194 ASN ASN B . n C 2 195 GLU 195 195 195 GLU GLU B . n C 2 196 VAL 196 196 196 VAL VAL B . n C 2 197 LEU 197 197 197 LEU LEU B . n C 2 198 GLN 198 198 198 GLN GLN B . n C 2 199 HIS 199 199 199 HIS HIS B . n C 2 200 TYR 200 200 200 TYR TYR B . n C 2 201 GLY 201 201 201 GLY GLY B . n C 2 202 SER 202 202 202 SER SER B . n C 2 203 GLY 203 203 203 GLY GLY B . n C 2 204 ASP 204 204 204 ASP ASP B . n C 2 205 ILE 205 205 205 ILE ILE B . n C 2 206 SER 206 206 206 SER SER B . n C 2 207 LEU 207 207 207 LEU LEU B . n C 2 208 SER 208 208 208 SER SER B . n C 2 209 PRO 209 209 209 PRO PRO B . n C 2 210 ARG 210 210 210 ARG ARG B . n C 2 211 GLY 211 211 211 GLY GLY B . n C 2 212 SER 212 212 212 SER SER B . n C 2 213 ILE 213 213 213 ILE ILE B . n C 2 214 ASN 214 214 214 ASN ASN B . n C 2 215 PHE 215 215 215 PHE PHE B . n C 2 216 GLY 216 216 216 GLY GLY B . n C 2 217 ARG 217 217 217 ARG ARG B . n C 2 218 VAL 218 218 218 VAL VAL B . n C 2 219 THR 219 219 219 THR THR B . n C 2 220 ILE 220 220 220 ILE ILE B . n C 2 221 GLN 221 221 221 GLN GLN B . n C 2 222 ARG 222 222 222 ARG ARG B . n C 2 223 LYS 223 223 223 LYS LYS B . n C 2 224 GLY 224 224 224 GLY GLY B . n C 2 225 GLY 225 225 225 GLY GLY B . n C 2 226 ASP 226 226 226 ASP ASP B . n C 2 227 ASN 227 227 227 ASN ASN B . n C 2 228 GLY 228 228 228 GLY GLY B . n C 2 229 ARG 229 229 229 ARG ARG B . n C 2 230 GLU 230 230 230 GLU GLU B . n C 2 231 THR 231 231 231 THR THR B . n C 2 232 ALA 232 232 232 ALA ALA B . n C 2 233 ASN 233 233 233 ASN ASN B . n C 2 234 MET 234 234 234 MET MET B . n C 2 235 LEU 235 235 235 LEU LEU B . n C 2 236 GLN 236 236 236 GLN GLN B . n C 2 237 PHE 237 237 237 PHE PHE B . n C 2 238 LYS 238 238 238 LYS LYS B . n C 2 239 ILE 239 239 239 ILE ILE B . n C 2 240 ASP 240 240 240 ASP ASP B . n C 2 241 PRO 241 241 241 PRO PRO B . n C 2 242 THR 242 242 242 THR THR B . n C 2 243 GLU 243 243 243 GLU GLU B . n C 2 244 LEU 244 244 244 LEU LEU B . n C 2 245 PHE 245 245 245 PHE PHE B . n C 2 246 ASP 246 246 246 ASP ASP B . n C 2 247 ILE 247 247 247 ILE ILE B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 CA 1 22 22 CA CA E . E 3 CA 1 248 21 CA CA B . F 4 HOH 1 23 7 HOH HOH E . F 4 HOH 2 24 11 HOH HOH E . G 4 HOH 1 21 12 HOH HOH F . H 4 HOH 1 249 1 HOH HOH B . H 4 HOH 2 250 3 HOH HOH B . H 4 HOH 3 251 4 HOH HOH B . H 4 HOH 4 252 5 HOH HOH B . H 4 HOH 5 253 6 HOH HOH B . H 4 HOH 6 254 8 HOH HOH B . H 4 HOH 7 255 9 HOH HOH B . H 4 HOH 8 256 10 HOH HOH B . H 4 HOH 9 257 13 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id B _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 251 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id H _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 "O3'" ? A DG 4 ? E DG 4 ? 1_555 CA ? D CA . ? E CA 22 ? 1_555 OP1 ? A DC 5 ? E DC 5 ? 1_555 55.4 ? 2 "O3'" ? A DG 4 ? E DG 4 ? 1_555 CA ? D CA . ? E CA 22 ? 1_555 OD1 ? C ASP 62 ? B ASP 62 ? 1_555 112.6 ? 3 OP1 ? A DC 5 ? E DC 5 ? 1_555 CA ? D CA . ? E CA 22 ? 1_555 OD1 ? C ASP 62 ? B ASP 62 ? 1_555 73.9 ? 4 OP1 ? A DC 5 ? E DC 5 ? 1_555 CA ? E CA . ? B CA 248 ? 1_555 OD2 ? C ASP 62 ? B ASP 62 ? 1_555 85.9 ? 5 OP1 ? A DC 5 ? E DC 5 ? 1_555 CA ? E CA . ? B CA 248 ? 1_555 OE1 ? C GLN 81 ? B GLN 81 ? 1_555 115.6 ? 6 OD2 ? C ASP 62 ? B ASP 62 ? 1_555 CA ? E CA . ? B CA 248 ? 1_555 OE1 ? C GLN 81 ? B GLN 81 ? 1_555 81.8 ? 7 OP1 ? A DC 5 ? E DC 5 ? 1_555 CA ? E CA . ? B CA 248 ? 1_555 O ? C VAL 82 ? B VAL 82 ? 1_555 152.5 ? 8 OD2 ? C ASP 62 ? B ASP 62 ? 1_555 CA ? E CA . ? B CA 248 ? 1_555 O ? C VAL 82 ? B VAL 82 ? 1_555 79.6 ? 9 OE1 ? C GLN 81 ? B GLN 81 ? 1_555 CA ? E CA . ? B CA 248 ? 1_555 O ? C VAL 82 ? B VAL 82 ? 1_555 85.5 ? 10 OP1 ? A DC 5 ? E DC 5 ? 1_555 CA ? E CA . ? B CA 248 ? 1_555 O ? H HOH . ? B HOH 249 ? 1_555 71.8 ? 11 OD2 ? C ASP 62 ? B ASP 62 ? 1_555 CA ? E CA . ? B CA 248 ? 1_555 O ? H HOH . ? B HOH 249 ? 1_555 81.2 ? 12 OE1 ? C GLN 81 ? B GLN 81 ? 1_555 CA ? E CA . ? B CA 248 ? 1_555 O ? H HOH . ? B HOH 249 ? 1_555 160.9 ? 13 O ? C VAL 82 ? B VAL 82 ? 1_555 CA ? E CA . ? B CA 248 ? 1_555 O ? H HOH . ? B HOH 249 ? 1_555 82.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-02-21 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2018-01-31 6 'Structure model' 1 5 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Database references' 5 6 'Structure model' 'Data collection' 6 6 'Structure model' 'Database references' 7 6 'Structure model' 'Derived calculations' 8 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' citation_author 3 6 'Structure model' chem_comp_atom 4 6 'Structure model' chem_comp_bond 5 6 'Structure model' database_2 6 6 'Structure model' pdbx_initial_refinement_model 7 6 'Structure model' pdbx_struct_conn_angle 8 6 'Structure model' struct_conn 9 6 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_citation_author.name' 2 6 'Structure model' '_database_2.pdbx_DOI' 3 6 'Structure model' '_database_2.pdbx_database_accession' 4 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 5 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 6 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 8 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 9 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 10 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 11 6 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 12 6 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 13 6 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 14 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 15 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 16 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 17 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 18 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 19 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 20 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 21 6 'Structure model' '_pdbx_struct_conn_angle.value' 22 6 'Structure model' '_struct_conn.pdbx_dist_value' 23 6 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 24 6 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 25 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 26 6 'Structure model' '_struct_conn.ptnr1_label_asym_id' 27 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 28 6 'Structure model' '_struct_conn.ptnr1_label_comp_id' 29 6 'Structure model' '_struct_conn.ptnr1_label_seq_id' 30 6 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 31 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 32 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 33 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' 34 6 'Structure model' '_struct_conn.ptnr2_label_atom_id' 35 6 'Structure model' '_struct_conn.ptnr2_label_comp_id' 36 6 'Structure model' '_struct_conn.ptnr2_label_seq_id' 37 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 38 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 39 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345 'data collection' . ? 1 SCALEPACK 'data scaling' . ? 2 GLRF phasing . ? 3 CNS refinement 1.1 ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN B 27 ? ? -97.98 57.50 2 1 LYS B 49 ? ? -120.49 -68.14 3 1 PHE B 91 ? ? -151.01 73.66 4 1 ASP B 95 ? ? 174.97 134.35 5 1 ASP B 109 ? ? -40.41 154.32 6 1 TYR B 126 ? ? -94.00 30.40 7 1 HIS B 127 ? ? 171.11 145.20 8 1 SER B 128 ? ? -62.92 -147.71 9 1 ASN B 156 ? ? -117.23 50.73 10 1 SER B 183 ? ? 80.26 -115.62 11 1 ASP B 204 ? ? -114.91 -169.71 12 1 ASN B 227 ? ? 43.48 24.16 13 1 LEU B 244 ? ? -64.10 11.03 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DG E 4 ? ? 0.083 'SIDE CHAIN' 2 1 DC E 5 ? ? 0.068 'SIDE CHAIN' 3 1 DG F 14 ? ? 0.073 'SIDE CHAIN' 4 1 DG F 16 ? ? 0.108 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B MET 1 ? CG ? C MET 1 CG 2 1 Y 1 B MET 1 ? SD ? C MET 1 SD 3 1 Y 1 B MET 1 ? CE ? C MET 1 CE 4 1 Y 1 B LEU 3 ? CG ? C LEU 3 CG 5 1 Y 1 B LEU 3 ? CD1 ? C LEU 3 CD1 6 1 Y 1 B LEU 3 ? CD2 ? C LEU 3 CD2 7 1 Y 1 B LYS 16 ? CG ? C LYS 16 CG 8 1 Y 1 B LYS 16 ? CD ? C LYS 16 CD 9 1 Y 1 B LYS 16 ? CE ? C LYS 16 CE 10 1 Y 1 B LYS 16 ? NZ ? C LYS 16 NZ 11 1 Y 1 B LYS 19 ? CG ? C LYS 19 CG 12 1 Y 1 B LYS 19 ? CD ? C LYS 19 CD 13 1 Y 1 B LYS 19 ? CE ? C LYS 19 CE 14 1 Y 1 B LYS 19 ? NZ ? C LYS 19 NZ 15 1 Y 1 B LYS 29 ? CG ? C LYS 29 CG 16 1 Y 1 B LYS 29 ? CD ? C LYS 29 CD 17 1 Y 1 B LYS 29 ? CE ? C LYS 29 CE 18 1 Y 1 B LYS 29 ? NZ ? C LYS 29 NZ 19 1 Y 1 B GLU 30 ? CG ? C GLU 30 CG 20 1 Y 1 B GLU 30 ? CD ? C GLU 30 CD 21 1 Y 1 B GLU 30 ? OE1 ? C GLU 30 OE1 22 1 Y 1 B GLU 30 ? OE2 ? C GLU 30 OE2 23 1 Y 1 B ILE 48 ? CG1 ? C ILE 48 CG1 24 1 Y 1 B ILE 48 ? CG2 ? C ILE 48 CG2 25 1 Y 1 B ILE 48 ? CD1 ? C ILE 48 CD1 26 1 Y 1 B LYS 49 ? CG ? C LYS 49 CG 27 1 Y 1 B LYS 49 ? CD ? C LYS 49 CD 28 1 Y 1 B LYS 49 ? CE ? C LYS 49 CE 29 1 Y 1 B LYS 49 ? NZ ? C LYS 49 NZ 30 1 Y 1 B LYS 52 ? CG ? C LYS 52 CG 31 1 Y 1 B LYS 52 ? CD ? C LYS 52 CD 32 1 Y 1 B LYS 52 ? CE ? C LYS 52 CE 33 1 Y 1 B LYS 52 ? NZ ? C LYS 52 NZ 34 1 Y 1 B LEU 68 ? CG ? C LEU 68 CG 35 1 Y 1 B LEU 68 ? CD1 ? C LEU 68 CD1 36 1 Y 1 B LEU 68 ? CD2 ? C LEU 68 CD2 37 1 Y 1 B TYR 71 ? CG ? C TYR 71 CG 38 1 Y 1 B TYR 71 ? CD1 ? C TYR 71 CD1 39 1 Y 1 B TYR 71 ? CD2 ? C TYR 71 CD2 40 1 Y 1 B TYR 71 ? CE1 ? C TYR 71 CE1 41 1 Y 1 B TYR 71 ? CE2 ? C TYR 71 CE2 42 1 Y 1 B TYR 71 ? CZ ? C TYR 71 CZ 43 1 Y 1 B TYR 71 ? OH ? C TYR 71 OH 44 1 Y 1 B LYS 72 ? CG ? C LYS 72 CG 45 1 Y 1 B LYS 72 ? CD ? C LYS 72 CD 46 1 Y 1 B LYS 72 ? CE ? C LYS 72 CE 47 1 Y 1 B LYS 72 ? NZ ? C LYS 72 NZ 48 1 Y 1 B ASP 73 ? CG ? C ASP 73 CG 49 1 Y 1 B ASP 73 ? OD1 ? C ASP 73 OD1 50 1 Y 1 B ASP 73 ? OD2 ? C ASP 73 OD2 51 1 Y 1 B ASN 129 ? CG ? C ASN 129 CG 52 1 Y 1 B ASN 129 ? OD1 ? C ASN 129 OD1 53 1 Y 1 B ASN 129 ? ND2 ? C ASN 129 ND2 54 1 Y 1 B LYS 131 ? CG ? C LYS 131 CG 55 1 Y 1 B LYS 131 ? CD ? C LYS 131 CD 56 1 Y 1 B LYS 131 ? CE ? C LYS 131 CE 57 1 Y 1 B LYS 131 ? NZ ? C LYS 131 NZ 58 1 Y 1 B LYS 133 ? CG ? C LYS 133 CG 59 1 Y 1 B LYS 133 ? CD ? C LYS 133 CD 60 1 Y 1 B LYS 133 ? CE ? C LYS 133 CE 61 1 Y 1 B LYS 133 ? NZ ? C LYS 133 NZ 62 1 Y 1 B GLU 144 ? CG ? C GLU 144 CG 63 1 Y 1 B GLU 144 ? CD ? C GLU 144 CD 64 1 Y 1 B GLU 144 ? OE1 ? C GLU 144 OE1 65 1 Y 1 B GLU 144 ? OE2 ? C GLU 144 OE2 66 1 Y 1 B LYS 181 ? CG ? C LYS 181 CG 67 1 Y 1 B LYS 181 ? CD ? C LYS 181 CD 68 1 Y 1 B LYS 181 ? CE ? C LYS 181 CE 69 1 Y 1 B LYS 181 ? NZ ? C LYS 181 NZ 70 1 Y 1 B ASN 184 ? CG ? C ASN 184 CG 71 1 Y 1 B ASN 184 ? OD1 ? C ASN 184 OD1 72 1 Y 1 B ASN 184 ? ND2 ? C ASN 184 ND2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 DA OP3 O N N 75 DA P P N N 76 DA OP1 O N N 77 DA OP2 O N N 78 DA "O5'" O N N 79 DA "C5'" C N N 80 DA "C4'" C N R 81 DA "O4'" O N N 82 DA "C3'" C N S 83 DA "O3'" O N N 84 DA "C2'" C N N 85 DA "C1'" C N R 86 DA N9 N Y N 87 DA C8 C Y N 88 DA N7 N Y N 89 DA C5 C Y N 90 DA C6 C Y N 91 DA N6 N N N 92 DA N1 N Y N 93 DA C2 C Y N 94 DA N3 N Y N 95 DA C4 C Y N 96 DA HOP3 H N N 97 DA HOP2 H N N 98 DA "H5'" H N N 99 DA "H5''" H N N 100 DA "H4'" H N N 101 DA "H3'" H N N 102 DA "HO3'" H N N 103 DA "H2'" H N N 104 DA "H2''" H N N 105 DA "H1'" H N N 106 DA H8 H N N 107 DA H61 H N N 108 DA H62 H N N 109 DA H2 H N N 110 DC OP3 O N N 111 DC P P N N 112 DC OP1 O N N 113 DC OP2 O N N 114 DC "O5'" O N N 115 DC "C5'" C N N 116 DC "C4'" C N R 117 DC "O4'" O N N 118 DC "C3'" C N S 119 DC "O3'" O N N 120 DC "C2'" C N N 121 DC "C1'" C N R 122 DC N1 N N N 123 DC C2 C N N 124 DC O2 O N N 125 DC N3 N N N 126 DC C4 C N N 127 DC N4 N N N 128 DC C5 C N N 129 DC C6 C N N 130 DC HOP3 H N N 131 DC HOP2 H N N 132 DC "H5'" H N N 133 DC "H5''" H N N 134 DC "H4'" H N N 135 DC "H3'" H N N 136 DC "HO3'" H N N 137 DC "H2'" H N N 138 DC "H2''" H N N 139 DC "H1'" H N N 140 DC H41 H N N 141 DC H42 H N N 142 DC H5 H N N 143 DC H6 H N N 144 DG OP3 O N N 145 DG P P N N 146 DG OP1 O N N 147 DG OP2 O N N 148 DG "O5'" O N N 149 DG "C5'" C N N 150 DG "C4'" C N R 151 DG "O4'" O N N 152 DG "C3'" C N S 153 DG "O3'" O N N 154 DG "C2'" C N N 155 DG "C1'" C N R 156 DG N9 N Y N 157 DG C8 C Y N 158 DG N7 N Y N 159 DG C5 C Y N 160 DG C6 C N N 161 DG O6 O N N 162 DG N1 N N N 163 DG C2 C N N 164 DG N2 N N N 165 DG N3 N N N 166 DG C4 C Y N 167 DG HOP3 H N N 168 DG HOP2 H N N 169 DG "H5'" H N N 170 DG "H5''" H N N 171 DG "H4'" H N N 172 DG "H3'" H N N 173 DG "HO3'" H N N 174 DG "H2'" H N N 175 DG "H2''" H N N 176 DG "H1'" H N N 177 DG H8 H N N 178 DG H1 H N N 179 DG H21 H N N 180 DG H22 H N N 181 DT OP3 O N N 182 DT P P N N 183 DT OP1 O N N 184 DT OP2 O N N 185 DT "O5'" O N N 186 DT "C5'" C N N 187 DT "C4'" C N R 188 DT "O4'" O N N 189 DT "C3'" C N S 190 DT "O3'" O N N 191 DT "C2'" C N N 192 DT "C1'" C N R 193 DT N1 N N N 194 DT C2 C N N 195 DT O2 O N N 196 DT N3 N N N 197 DT C4 C N N 198 DT O4 O N N 199 DT C5 C N N 200 DT C7 C N N 201 DT C6 C N N 202 DT HOP3 H N N 203 DT HOP2 H N N 204 DT "H5'" H N N 205 DT "H5''" H N N 206 DT "H4'" H N N 207 DT "H3'" H N N 208 DT "HO3'" H N N 209 DT "H2'" H N N 210 DT "H2''" H N N 211 DT "H1'" H N N 212 DT H3 H N N 213 DT H71 H N N 214 DT H72 H N N 215 DT H73 H N N 216 DT H6 H N N 217 GLN N N N N 218 GLN CA C N S 219 GLN C C N N 220 GLN O O N N 221 GLN CB C N N 222 GLN CG C N N 223 GLN CD C N N 224 GLN OE1 O N N 225 GLN NE2 N N N 226 GLN OXT O N N 227 GLN H H N N 228 GLN H2 H N N 229 GLN HA H N N 230 GLN HB2 H N N 231 GLN HB3 H N N 232 GLN HG2 H N N 233 GLN HG3 H N N 234 GLN HE21 H N N 235 GLN HE22 H N N 236 GLN HXT H N N 237 GLU N N N N 238 GLU CA C N S 239 GLU C C N N 240 GLU O O N N 241 GLU CB C N N 242 GLU CG C N N 243 GLU CD C N N 244 GLU OE1 O N N 245 GLU OE2 O N N 246 GLU OXT O N N 247 GLU H H N N 248 GLU H2 H N N 249 GLU HA H N N 250 GLU HB2 H N N 251 GLU HB3 H N N 252 GLU HG2 H N N 253 GLU HG3 H N N 254 GLU HE2 H N N 255 GLU HXT H N N 256 GLY N N N N 257 GLY CA C N N 258 GLY C C N N 259 GLY O O N N 260 GLY OXT O N N 261 GLY H H N N 262 GLY H2 H N N 263 GLY HA2 H N N 264 GLY HA3 H N N 265 GLY HXT H N N 266 HIS N N N N 267 HIS CA C N S 268 HIS C C N N 269 HIS O O N N 270 HIS CB C N N 271 HIS CG C Y N 272 HIS ND1 N Y N 273 HIS CD2 C Y N 274 HIS CE1 C Y N 275 HIS NE2 N Y N 276 HIS OXT O N N 277 HIS H H N N 278 HIS H2 H N N 279 HIS HA H N N 280 HIS HB2 H N N 281 HIS HB3 H N N 282 HIS HD1 H N N 283 HIS HD2 H N N 284 HIS HE1 H N N 285 HIS HE2 H N N 286 HIS HXT H N N 287 HOH O O N N 288 HOH H1 H N N 289 HOH H2 H N N 290 ILE N N N N 291 ILE CA C N S 292 ILE C C N N 293 ILE O O N N 294 ILE CB C N S 295 ILE CG1 C N N 296 ILE CG2 C N N 297 ILE CD1 C N N 298 ILE OXT O N N 299 ILE H H N N 300 ILE H2 H N N 301 ILE HA H N N 302 ILE HB H N N 303 ILE HG12 H N N 304 ILE HG13 H N N 305 ILE HG21 H N N 306 ILE HG22 H N N 307 ILE HG23 H N N 308 ILE HD11 H N N 309 ILE HD12 H N N 310 ILE HD13 H N N 311 ILE HXT H N N 312 LEU N N N N 313 LEU CA C N S 314 LEU C C N N 315 LEU O O N N 316 LEU CB C N N 317 LEU CG C N N 318 LEU CD1 C N N 319 LEU CD2 C N N 320 LEU OXT O N N 321 LEU H H N N 322 LEU H2 H N N 323 LEU HA H N N 324 LEU HB2 H N N 325 LEU HB3 H N N 326 LEU HG H N N 327 LEU HD11 H N N 328 LEU HD12 H N N 329 LEU HD13 H N N 330 LEU HD21 H N N 331 LEU HD22 H N N 332 LEU HD23 H N N 333 LEU HXT H N N 334 LYS N N N N 335 LYS CA C N S 336 LYS C C N N 337 LYS O O N N 338 LYS CB C N N 339 LYS CG C N N 340 LYS CD C N N 341 LYS CE C N N 342 LYS NZ N N N 343 LYS OXT O N N 344 LYS H H N N 345 LYS H2 H N N 346 LYS HA H N N 347 LYS HB2 H N N 348 LYS HB3 H N N 349 LYS HG2 H N N 350 LYS HG3 H N N 351 LYS HD2 H N N 352 LYS HD3 H N N 353 LYS HE2 H N N 354 LYS HE3 H N N 355 LYS HZ1 H N N 356 LYS HZ2 H N N 357 LYS HZ3 H N N 358 LYS HXT H N N 359 MET N N N N 360 MET CA C N S 361 MET C C N N 362 MET O O N N 363 MET CB C N N 364 MET CG C N N 365 MET SD S N N 366 MET CE C N N 367 MET OXT O N N 368 MET H H N N 369 MET H2 H N N 370 MET HA H N N 371 MET HB2 H N N 372 MET HB3 H N N 373 MET HG2 H N N 374 MET HG3 H N N 375 MET HE1 H N N 376 MET HE2 H N N 377 MET HE3 H N N 378 MET HXT H N N 379 PHE N N N N 380 PHE CA C N S 381 PHE C C N N 382 PHE O O N N 383 PHE CB C N N 384 PHE CG C Y N 385 PHE CD1 C Y N 386 PHE CD2 C Y N 387 PHE CE1 C Y N 388 PHE CE2 C Y N 389 PHE CZ C Y N 390 PHE OXT O N N 391 PHE H H N N 392 PHE H2 H N N 393 PHE HA H N N 394 PHE HB2 H N N 395 PHE HB3 H N N 396 PHE HD1 H N N 397 PHE HD2 H N N 398 PHE HE1 H N N 399 PHE HE2 H N N 400 PHE HZ H N N 401 PHE HXT H N N 402 PRO N N N N 403 PRO CA C N S 404 PRO C C N N 405 PRO O O N N 406 PRO CB C N N 407 PRO CG C N N 408 PRO CD C N N 409 PRO OXT O N N 410 PRO H H N N 411 PRO HA H N N 412 PRO HB2 H N N 413 PRO HB3 H N N 414 PRO HG2 H N N 415 PRO HG3 H N N 416 PRO HD2 H N N 417 PRO HD3 H N N 418 PRO HXT H N N 419 SER N N N N 420 SER CA C N S 421 SER C C N N 422 SER O O N N 423 SER CB C N N 424 SER OG O N N 425 SER OXT O N N 426 SER H H N N 427 SER H2 H N N 428 SER HA H N N 429 SER HB2 H N N 430 SER HB3 H N N 431 SER HG H N N 432 SER HXT H N N 433 THR N N N N 434 THR CA C N S 435 THR C C N N 436 THR O O N N 437 THR CB C N R 438 THR OG1 O N N 439 THR CG2 C N N 440 THR OXT O N N 441 THR H H N N 442 THR H2 H N N 443 THR HA H N N 444 THR HB H N N 445 THR HG1 H N N 446 THR HG21 H N N 447 THR HG22 H N N 448 THR HG23 H N N 449 THR HXT H N N 450 TRP N N N N 451 TRP CA C N S 452 TRP C C N N 453 TRP O O N N 454 TRP CB C N N 455 TRP CG C Y N 456 TRP CD1 C Y N 457 TRP CD2 C Y N 458 TRP NE1 N Y N 459 TRP CE2 C Y N 460 TRP CE3 C Y N 461 TRP CZ2 C Y N 462 TRP CZ3 C Y N 463 TRP CH2 C Y N 464 TRP OXT O N N 465 TRP H H N N 466 TRP H2 H N N 467 TRP HA H N N 468 TRP HB2 H N N 469 TRP HB3 H N N 470 TRP HD1 H N N 471 TRP HE1 H N N 472 TRP HE3 H N N 473 TRP HZ2 H N N 474 TRP HZ3 H N N 475 TRP HH2 H N N 476 TRP HXT H N N 477 TYR N N N N 478 TYR CA C N S 479 TYR C C N N 480 TYR O O N N 481 TYR CB C N N 482 TYR CG C Y N 483 TYR CD1 C Y N 484 TYR CD2 C Y N 485 TYR CE1 C Y N 486 TYR CE2 C Y N 487 TYR CZ C Y N 488 TYR OH O N N 489 TYR OXT O N N 490 TYR H H N N 491 TYR H2 H N N 492 TYR HA H N N 493 TYR HB2 H N N 494 TYR HB3 H N N 495 TYR HD1 H N N 496 TYR HD2 H N N 497 TYR HE1 H N N 498 TYR HE2 H N N 499 TYR HH H N N 500 TYR HXT H N N 501 VAL N N N N 502 VAL CA C N S 503 VAL C C N N 504 VAL O O N N 505 VAL CB C N N 506 VAL CG1 C N N 507 VAL CG2 C N N 508 VAL OXT O N N 509 VAL H H N N 510 VAL H2 H N N 511 VAL HA H N N 512 VAL HB H N N 513 VAL HG11 H N N 514 VAL HG12 H N N 515 VAL HG13 H N N 516 VAL HG21 H N N 517 VAL HG22 H N N 518 VAL HG23 H N N 519 VAL HXT H N N 520 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DG OP3 P sing N N 143 DG OP3 HOP3 sing N N 144 DG P OP1 doub N N 145 DG P OP2 sing N N 146 DG P "O5'" sing N N 147 DG OP2 HOP2 sing N N 148 DG "O5'" "C5'" sing N N 149 DG "C5'" "C4'" sing N N 150 DG "C5'" "H5'" sing N N 151 DG "C5'" "H5''" sing N N 152 DG "C4'" "O4'" sing N N 153 DG "C4'" "C3'" sing N N 154 DG "C4'" "H4'" sing N N 155 DG "O4'" "C1'" sing N N 156 DG "C3'" "O3'" sing N N 157 DG "C3'" "C2'" sing N N 158 DG "C3'" "H3'" sing N N 159 DG "O3'" "HO3'" sing N N 160 DG "C2'" "C1'" sing N N 161 DG "C2'" "H2'" sing N N 162 DG "C2'" "H2''" sing N N 163 DG "C1'" N9 sing N N 164 DG "C1'" "H1'" sing N N 165 DG N9 C8 sing Y N 166 DG N9 C4 sing Y N 167 DG C8 N7 doub Y N 168 DG C8 H8 sing N N 169 DG N7 C5 sing Y N 170 DG C5 C6 sing N N 171 DG C5 C4 doub Y N 172 DG C6 O6 doub N N 173 DG C6 N1 sing N N 174 DG N1 C2 sing N N 175 DG N1 H1 sing N N 176 DG C2 N2 sing N N 177 DG C2 N3 doub N N 178 DG N2 H21 sing N N 179 DG N2 H22 sing N N 180 DG N3 C4 sing N N 181 DT OP3 P sing N N 182 DT OP3 HOP3 sing N N 183 DT P OP1 doub N N 184 DT P OP2 sing N N 185 DT P "O5'" sing N N 186 DT OP2 HOP2 sing N N 187 DT "O5'" "C5'" sing N N 188 DT "C5'" "C4'" sing N N 189 DT "C5'" "H5'" sing N N 190 DT "C5'" "H5''" sing N N 191 DT "C4'" "O4'" sing N N 192 DT "C4'" "C3'" sing N N 193 DT "C4'" "H4'" sing N N 194 DT "O4'" "C1'" sing N N 195 DT "C3'" "O3'" sing N N 196 DT "C3'" "C2'" sing N N 197 DT "C3'" "H3'" sing N N 198 DT "O3'" "HO3'" sing N N 199 DT "C2'" "C1'" sing N N 200 DT "C2'" "H2'" sing N N 201 DT "C2'" "H2''" sing N N 202 DT "C1'" N1 sing N N 203 DT "C1'" "H1'" sing N N 204 DT N1 C2 sing N N 205 DT N1 C6 sing N N 206 DT C2 O2 doub N N 207 DT C2 N3 sing N N 208 DT N3 C4 sing N N 209 DT N3 H3 sing N N 210 DT C4 O4 doub N N 211 DT C4 C5 sing N N 212 DT C5 C7 sing N N 213 DT C5 C6 doub N N 214 DT C7 H71 sing N N 215 DT C7 H72 sing N N 216 DT C7 H73 sing N N 217 DT C6 H6 sing N N 218 GLN N CA sing N N 219 GLN N H sing N N 220 GLN N H2 sing N N 221 GLN CA C sing N N 222 GLN CA CB sing N N 223 GLN CA HA sing N N 224 GLN C O doub N N 225 GLN C OXT sing N N 226 GLN CB CG sing N N 227 GLN CB HB2 sing N N 228 GLN CB HB3 sing N N 229 GLN CG CD sing N N 230 GLN CG HG2 sing N N 231 GLN CG HG3 sing N N 232 GLN CD OE1 doub N N 233 GLN CD NE2 sing N N 234 GLN NE2 HE21 sing N N 235 GLN NE2 HE22 sing N N 236 GLN OXT HXT sing N N 237 GLU N CA sing N N 238 GLU N H sing N N 239 GLU N H2 sing N N 240 GLU CA C sing N N 241 GLU CA CB sing N N 242 GLU CA HA sing N N 243 GLU C O doub N N 244 GLU C OXT sing N N 245 GLU CB CG sing N N 246 GLU CB HB2 sing N N 247 GLU CB HB3 sing N N 248 GLU CG CD sing N N 249 GLU CG HG2 sing N N 250 GLU CG HG3 sing N N 251 GLU CD OE1 doub N N 252 GLU CD OE2 sing N N 253 GLU OE2 HE2 sing N N 254 GLU OXT HXT sing N N 255 GLY N CA sing N N 256 GLY N H sing N N 257 GLY N H2 sing N N 258 GLY CA C sing N N 259 GLY CA HA2 sing N N 260 GLY CA HA3 sing N N 261 GLY C O doub N N 262 GLY C OXT sing N N 263 GLY OXT HXT sing N N 264 HIS N CA sing N N 265 HIS N H sing N N 266 HIS N H2 sing N N 267 HIS CA C sing N N 268 HIS CA CB sing N N 269 HIS CA HA sing N N 270 HIS C O doub N N 271 HIS C OXT sing N N 272 HIS CB CG sing N N 273 HIS CB HB2 sing N N 274 HIS CB HB3 sing N N 275 HIS CG ND1 sing Y N 276 HIS CG CD2 doub Y N 277 HIS ND1 CE1 doub Y N 278 HIS ND1 HD1 sing N N 279 HIS CD2 NE2 sing Y N 280 HIS CD2 HD2 sing N N 281 HIS CE1 NE2 sing Y N 282 HIS CE1 HE1 sing N N 283 HIS NE2 HE2 sing N N 284 HIS OXT HXT sing N N 285 HOH O H1 sing N N 286 HOH O H2 sing N N 287 ILE N CA sing N N 288 ILE N H sing N N 289 ILE N H2 sing N N 290 ILE CA C sing N N 291 ILE CA CB sing N N 292 ILE CA HA sing N N 293 ILE C O doub N N 294 ILE C OXT sing N N 295 ILE CB CG1 sing N N 296 ILE CB CG2 sing N N 297 ILE CB HB sing N N 298 ILE CG1 CD1 sing N N 299 ILE CG1 HG12 sing N N 300 ILE CG1 HG13 sing N N 301 ILE CG2 HG21 sing N N 302 ILE CG2 HG22 sing N N 303 ILE CG2 HG23 sing N N 304 ILE CD1 HD11 sing N N 305 ILE CD1 HD12 sing N N 306 ILE CD1 HD13 sing N N 307 ILE OXT HXT sing N N 308 LEU N CA sing N N 309 LEU N H sing N N 310 LEU N H2 sing N N 311 LEU CA C sing N N 312 LEU CA CB sing N N 313 LEU CA HA sing N N 314 LEU C O doub N N 315 LEU C OXT sing N N 316 LEU CB CG sing N N 317 LEU CB HB2 sing N N 318 LEU CB HB3 sing N N 319 LEU CG CD1 sing N N 320 LEU CG CD2 sing N N 321 LEU CG HG sing N N 322 LEU CD1 HD11 sing N N 323 LEU CD1 HD12 sing N N 324 LEU CD1 HD13 sing N N 325 LEU CD2 HD21 sing N N 326 LEU CD2 HD22 sing N N 327 LEU CD2 HD23 sing N N 328 LEU OXT HXT sing N N 329 LYS N CA sing N N 330 LYS N H sing N N 331 LYS N H2 sing N N 332 LYS CA C sing N N 333 LYS CA CB sing N N 334 LYS CA HA sing N N 335 LYS C O doub N N 336 LYS C OXT sing N N 337 LYS CB CG sing N N 338 LYS CB HB2 sing N N 339 LYS CB HB3 sing N N 340 LYS CG CD sing N N 341 LYS CG HG2 sing N N 342 LYS CG HG3 sing N N 343 LYS CD CE sing N N 344 LYS CD HD2 sing N N 345 LYS CD HD3 sing N N 346 LYS CE NZ sing N N 347 LYS CE HE2 sing N N 348 LYS CE HE3 sing N N 349 LYS NZ HZ1 sing N N 350 LYS NZ HZ2 sing N N 351 LYS NZ HZ3 sing N N 352 LYS OXT HXT sing N N 353 MET N CA sing N N 354 MET N H sing N N 355 MET N H2 sing N N 356 MET CA C sing N N 357 MET CA CB sing N N 358 MET CA HA sing N N 359 MET C O doub N N 360 MET C OXT sing N N 361 MET CB CG sing N N 362 MET CB HB2 sing N N 363 MET CB HB3 sing N N 364 MET CG SD sing N N 365 MET CG HG2 sing N N 366 MET CG HG3 sing N N 367 MET SD CE sing N N 368 MET CE HE1 sing N N 369 MET CE HE2 sing N N 370 MET CE HE3 sing N N 371 MET OXT HXT sing N N 372 PHE N CA sing N N 373 PHE N H sing N N 374 PHE N H2 sing N N 375 PHE CA C sing N N 376 PHE CA CB sing N N 377 PHE CA HA sing N N 378 PHE C O doub N N 379 PHE C OXT sing N N 380 PHE CB CG sing N N 381 PHE CB HB2 sing N N 382 PHE CB HB3 sing N N 383 PHE CG CD1 doub Y N 384 PHE CG CD2 sing Y N 385 PHE CD1 CE1 sing Y N 386 PHE CD1 HD1 sing N N 387 PHE CD2 CE2 doub Y N 388 PHE CD2 HD2 sing N N 389 PHE CE1 CZ doub Y N 390 PHE CE1 HE1 sing N N 391 PHE CE2 CZ sing Y N 392 PHE CE2 HE2 sing N N 393 PHE CZ HZ sing N N 394 PHE OXT HXT sing N N 395 PRO N CA sing N N 396 PRO N CD sing N N 397 PRO N H sing N N 398 PRO CA C sing N N 399 PRO CA CB sing N N 400 PRO CA HA sing N N 401 PRO C O doub N N 402 PRO C OXT sing N N 403 PRO CB CG sing N N 404 PRO CB HB2 sing N N 405 PRO CB HB3 sing N N 406 PRO CG CD sing N N 407 PRO CG HG2 sing N N 408 PRO CG HG3 sing N N 409 PRO CD HD2 sing N N 410 PRO CD HD3 sing N N 411 PRO OXT HXT sing N N 412 SER N CA sing N N 413 SER N H sing N N 414 SER N H2 sing N N 415 SER CA C sing N N 416 SER CA CB sing N N 417 SER CA HA sing N N 418 SER C O doub N N 419 SER C OXT sing N N 420 SER CB OG sing N N 421 SER CB HB2 sing N N 422 SER CB HB3 sing N N 423 SER OG HG sing N N 424 SER OXT HXT sing N N 425 THR N CA sing N N 426 THR N H sing N N 427 THR N H2 sing N N 428 THR CA C sing N N 429 THR CA CB sing N N 430 THR CA HA sing N N 431 THR C O doub N N 432 THR C OXT sing N N 433 THR CB OG1 sing N N 434 THR CB CG2 sing N N 435 THR CB HB sing N N 436 THR OG1 HG1 sing N N 437 THR CG2 HG21 sing N N 438 THR CG2 HG22 sing N N 439 THR CG2 HG23 sing N N 440 THR OXT HXT sing N N 441 TRP N CA sing N N 442 TRP N H sing N N 443 TRP N H2 sing N N 444 TRP CA C sing N N 445 TRP CA CB sing N N 446 TRP CA HA sing N N 447 TRP C O doub N N 448 TRP C OXT sing N N 449 TRP CB CG sing N N 450 TRP CB HB2 sing N N 451 TRP CB HB3 sing N N 452 TRP CG CD1 doub Y N 453 TRP CG CD2 sing Y N 454 TRP CD1 NE1 sing Y N 455 TRP CD1 HD1 sing N N 456 TRP CD2 CE2 doub Y N 457 TRP CD2 CE3 sing Y N 458 TRP NE1 CE2 sing Y N 459 TRP NE1 HE1 sing N N 460 TRP CE2 CZ2 sing Y N 461 TRP CE3 CZ3 doub Y N 462 TRP CE3 HE3 sing N N 463 TRP CZ2 CH2 doub Y N 464 TRP CZ2 HZ2 sing N N 465 TRP CZ3 CH2 sing Y N 466 TRP CZ3 HZ3 sing N N 467 TRP CH2 HH2 sing N N 468 TRP OXT HXT sing N N 469 TYR N CA sing N N 470 TYR N H sing N N 471 TYR N H2 sing N N 472 TYR CA C sing N N 473 TYR CA CB sing N N 474 TYR CA HA sing N N 475 TYR C O doub N N 476 TYR C OXT sing N N 477 TYR CB CG sing N N 478 TYR CB HB2 sing N N 479 TYR CB HB3 sing N N 480 TYR CG CD1 doub Y N 481 TYR CG CD2 sing Y N 482 TYR CD1 CE1 sing Y N 483 TYR CD1 HD1 sing N N 484 TYR CD2 CE2 doub Y N 485 TYR CD2 HD2 sing N N 486 TYR CE1 CZ doub Y N 487 TYR CE1 HE1 sing N N 488 TYR CE2 CZ sing Y N 489 TYR CE2 HE2 sing N N 490 TYR CZ OH sing N N 491 TYR OH HH sing N N 492 TYR OXT HXT sing N N 493 VAL N CA sing N N 494 VAL N H sing N N 495 VAL N H2 sing N N 496 VAL CA C sing N N 497 VAL CA CB sing N N 498 VAL CA HA sing N N 499 VAL C O doub N N 500 VAL C OXT sing N N 501 VAL CB CG1 sing N N 502 VAL CB CG2 sing N N 503 VAL CB HB sing N N 504 VAL CG1 HG11 sing N N 505 VAL CG1 HG12 sing N N 506 VAL CG1 HG13 sing N N 507 VAL CG2 HG21 sing N N 508 VAL CG2 HG22 sing N N 509 VAL CG2 HG23 sing N N 510 VAL OXT HXT sing N N 511 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2FKH 'double helix' 2FKH 'b-form double helix' 2FKH 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 10 1_555 -0.391 -0.115 0.178 0.057 -12.051 0.771 1 E_DC1:DG20_F E 1 ? F 20 ? 19 1 1 A DC 2 1_555 B DG 9 1_555 0.148 -0.199 -0.074 1.874 -2.813 4.397 2 E_DC2:DG19_F E 2 ? F 19 ? 19 1 1 A DG 4 1_555 B DC 7 1_555 -0.220 -0.327 -0.720 -23.132 2.610 0.829 3 E_DG4:DC17_F E 4 ? F 17 ? 19 1 1 A DC 5 1_555 B DG 6 1_555 0.264 0.083 -0.309 -17.384 17.254 0.863 4 E_DC5:DG16_F E 5 ? F 16 ? 19 1 1 A DG 6 1_555 B DC 5 1_555 0.702 -0.206 -0.401 2.319 16.418 -4.313 5 E_DG6:DC15_F E 6 ? F 15 ? 19 1 1 A DC 7 1_555 B DG 4 1_555 0.305 -0.383 -0.350 11.244 -15.193 -13.990 6 E_DC7:DG14_F E 7 ? F 14 ? 19 1 1 A DT 8 1_555 B DA 3 1_555 0.102 0.057 -0.334 7.607 11.534 1.516 7 E_DT8:DA13_F E 8 ? F 13 ? 20 1 1 A DG 9 1_555 B DC 2 1_555 0.033 -0.123 0.537 15.822 -5.535 -8.786 8 E_DG9:DC12_F E 9 ? F 12 ? 19 1 1 A DG 10 1_555 B DC 1 1_555 0.254 -0.241 0.019 2.749 -9.469 -4.011 9 E_DG10:DC11_F E 10 ? F 11 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 10 1_555 A DC 2 1_555 B DG 9 1_555 0.678 2.193 3.364 7.932 5.327 36.841 2.622 0.067 3.697 8.259 -12.299 38.019 1 EE_DC1DC2:DG19DG20_FF E 1 ? F 20 ? E 2 ? F 19 ? 1 A DG 4 1_555 B DC 7 1_555 A DC 5 1_555 B DG 6 1_555 0.069 -1.857 3.488 -0.019 1.685 30.728 -3.846 -0.134 3.384 3.177 0.035 30.773 2 EE_DG4DC5:DG16DC17_FF E 4 ? F 17 ? E 5 ? F 16 ? 1 A DC 5 1_555 B DG 6 1_555 A DG 6 1_555 B DC 5 1_555 0.856 -0.962 2.967 5.504 10.490 21.740 -5.039 -0.535 2.399 25.519 -13.388 24.724 3 EE_DC5DG6:DC15DG16_FF E 5 ? F 16 ? E 6 ? F 15 ? 1 A DG 6 1_555 B DC 5 1_555 A DC 7 1_555 B DG 4 1_555 -1.573 -0.206 3.204 1.427 -3.630 38.179 0.127 2.567 3.151 -5.531 -2.174 38.370 4 EE_DG6DC7:DG14DC15_FF E 6 ? F 15 ? E 7 ? F 14 ? 1 A DC 7 1_555 B DG 4 1_555 A DT 8 1_555 B DA 3 1_555 1.608 0.456 4.313 2.479 -28.786 38.901 3.529 -1.717 3.340 -37.588 -3.237 48.121 5 EE_DC7DT8:DA13DG14_FF E 7 ? F 14 ? E 8 ? F 13 ? 1 A DT 8 1_555 B DA 3 1_555 A DG 9 1_555 B DC 2 1_555 -1.252 0.605 3.267 -5.893 -5.949 35.807 1.784 1.171 3.286 -9.515 9.427 36.742 6 EE_DT8DG9:DC12DA13_FF E 8 ? F 13 ? E 9 ? F 12 ? 1 A DG 9 1_555 B DC 2 1_555 A DG 10 1_555 B DC 1 1_555 0.572 -0.335 3.710 3.760 7.963 39.883 -1.475 -0.351 3.617 11.504 -5.432 40.805 7 EE_DG9DG10:DC11DC12_FF E 9 ? F 12 ? E 10 ? F 11 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'CALCIUM ION' CA 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1YNM _pdbx_initial_refinement_model.details 'pdb entry 1YNM' #