data_2FLD # _entry.id 2FLD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2FLD pdb_00002fld 10.2210/pdb2fld/pdb NDB PD0765 ? ? RCSB RCSB036016 ? ? WWPDB D_1000036016 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1M5X _pdbx_database_related.details 'Crystal structure of the homing endonuclease I-MsoI bound to its DNA substrate' _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 2FLD _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2006-01-05 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ashworth, J.' 1 'Duarte, C.M.' 2 'Havranek, J.J.' 3 'Sussman, D.' 4 'Monnat, R.J.' 5 'Stoddard, B.L.' 6 'Baker, D.' 7 # _citation.id primary _citation.title 'Computational redesign of endonuclease DNA binding and cleavage specificity.' _citation.journal_abbrev Nature _citation.journal_volume 441 _citation.page_first 656 _citation.page_last 659 _citation.year 2006 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16738662 _citation.pdbx_database_id_DOI 10.1038/nature04818 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ashworth, J.' 1 ? primary 'Havranek, J.J.' 2 ? primary 'Duarte, C.M.' 3 ? primary 'Sussman, D.' 4 ? primary 'Monnat, R.J.' 5 ? primary 'Stoddard, B.L.' 6 ? primary 'Baker, D.' 7 ? # _cell.length_a 41.961 _cell.length_b 42.981 _cell.length_c 71.545 _cell.angle_alpha 72.29 _cell.angle_beta 72.30 _cell.angle_gamma 70.51 _cell.entry_id 2FLD _cell.pdbx_unique_axis ? _cell.Z_PDB 2 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 1' _symmetry.entry_id 2FLD _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 1 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*GP*CP*AP*GP*AP*AP*GP*GP*TP*CP*GP*TP*GP*AP*GP*AP*CP*CP*GP*TP*TP*CP*CP*G)-3'" 7435.791 1 ? 'L28K, R83T' ? ? 2 polymer syn "5'-D(*CP*GP*GP*AP*AP*CP*GP*GP*TP*CP*TP*CP*AP*CP*GP*AP*CP*CP*TP*TP*CP*TP*GP*C)-3'" 7306.704 1 ? ? ? ? 3 polymer man 'DNA ENDONUCLEASE I-MSOI' 18934.797 2 ? ? ? ? 4 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 5 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 6 water nat water 18.015 97 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no ;(DG)(DC)(DA)(DG)(DA)(DA)(DG)(DG)(DT)(DC)(DG)(DT)(DG)(DA)(DG)(DA)(DC)(DC)(DG)(DT) (DT)(DC)(DC)(DG) ; GCAGAAGGTCGTGAGACCGTTCCG C ? 2 polydeoxyribonucleotide no no ;(DC)(DG)(DG)(DA)(DA)(DC)(DG)(DG)(DT)(DC)(DT)(DC)(DA)(DC)(DG)(DA)(DC)(DC)(DT)(DT) (DC)(DT)(DG)(DC) ; CGGAACGGTCTCACGACCTTCTGC D ? 3 'polypeptide(L)' no no ;TLQPTEAAYIAGFLDGDGSIYALLIPRPDYKDIKYQVSLAISFIQRKDKFPYLQDIYDQLGKRGNLRKDRGDGIADYRII GSTHLSIILPDLVPYLRIKKKQANRILHIINLYPQAQKNPSKFLDLVKIVDDVQNLNKRADELKSTNYDRLLEEFLKAGK IESSP ; ;TLQPTEAAYIAGFLDGDGSIYALLIPRPDYKDIKYQVSLAISFIQRKDKFPYLQDIYDQLGKRGNLRKDRGDGIADYRII GSTHLSIILPDLVPYLRIKKKQANRILHIINLYPQAQKNPSKFLDLVKIVDDVQNLNKRADELKSTNYDRLLEEFLKAGK IESSP ; A,B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DC n 1 3 DA n 1 4 DG n 1 5 DA n 1 6 DA n 1 7 DG n 1 8 DG n 1 9 DT n 1 10 DC n 1 11 DG n 1 12 DT n 1 13 DG n 1 14 DA n 1 15 DG n 1 16 DA n 1 17 DC n 1 18 DC n 1 19 DG n 1 20 DT n 1 21 DT n 1 22 DC n 1 23 DC n 1 24 DG n 2 1 DC n 2 2 DG n 2 3 DG n 2 4 DA n 2 5 DA n 2 6 DC n 2 7 DG n 2 8 DG n 2 9 DT n 2 10 DC n 2 11 DT n 2 12 DC n 2 13 DA n 2 14 DC n 2 15 DG n 2 16 DA n 2 17 DC n 2 18 DC n 2 19 DT n 2 20 DT n 2 21 DC n 2 22 DT n 2 23 DG n 2 24 DC n 3 1 THR n 3 2 LEU n 3 3 GLN n 3 4 PRO n 3 5 THR n 3 6 GLU n 3 7 ALA n 3 8 ALA n 3 9 TYR n 3 10 ILE n 3 11 ALA n 3 12 GLY n 3 13 PHE n 3 14 LEU n 3 15 ASP n 3 16 GLY n 3 17 ASP n 3 18 GLY n 3 19 SER n 3 20 ILE n 3 21 TYR n 3 22 ALA n 3 23 LEU n 3 24 LEU n 3 25 ILE n 3 26 PRO n 3 27 ARG n 3 28 PRO n 3 29 ASP n 3 30 TYR n 3 31 LYS n 3 32 ASP n 3 33 ILE n 3 34 LYS n 3 35 TYR n 3 36 GLN n 3 37 VAL n 3 38 SER n 3 39 LEU n 3 40 ALA n 3 41 ILE n 3 42 SER n 3 43 PHE n 3 44 ILE n 3 45 GLN n 3 46 ARG n 3 47 LYS n 3 48 ASP n 3 49 LYS n 3 50 PHE n 3 51 PRO n 3 52 TYR n 3 53 LEU n 3 54 GLN n 3 55 ASP n 3 56 ILE n 3 57 TYR n 3 58 ASP n 3 59 GLN n 3 60 LEU n 3 61 GLY n 3 62 LYS n 3 63 ARG n 3 64 GLY n 3 65 ASN n 3 66 LEU n 3 67 ARG n 3 68 LYS n 3 69 ASP n 3 70 ARG n 3 71 GLY n 3 72 ASP n 3 73 GLY n 3 74 ILE n 3 75 ALA n 3 76 ASP n 3 77 TYR n 3 78 ARG n 3 79 ILE n 3 80 ILE n 3 81 GLY n 3 82 SER n 3 83 THR n 3 84 HIS n 3 85 LEU n 3 86 SER n 3 87 ILE n 3 88 ILE n 3 89 LEU n 3 90 PRO n 3 91 ASP n 3 92 LEU n 3 93 VAL n 3 94 PRO n 3 95 TYR n 3 96 LEU n 3 97 ARG n 3 98 ILE n 3 99 LYS n 3 100 LYS n 3 101 LYS n 3 102 GLN n 3 103 ALA n 3 104 ASN n 3 105 ARG n 3 106 ILE n 3 107 LEU n 3 108 HIS n 3 109 ILE n 3 110 ILE n 3 111 ASN n 3 112 LEU n 3 113 TYR n 3 114 PRO n 3 115 GLN n 3 116 ALA n 3 117 GLN n 3 118 LYS n 3 119 ASN n 3 120 PRO n 3 121 SER n 3 122 LYS n 3 123 PHE n 3 124 LEU n 3 125 ASP n 3 126 LEU n 3 127 VAL n 3 128 LYS n 3 129 ILE n 3 130 VAL n 3 131 ASP n 3 132 ASP n 3 133 VAL n 3 134 GLN n 3 135 ASN n 3 136 LEU n 3 137 ASN n 3 138 LYS n 3 139 ARG n 3 140 ALA n 3 141 ASP n 3 142 GLU n 3 143 LEU n 3 144 LYS n 3 145 SER n 3 146 THR n 3 147 ASN n 3 148 TYR n 3 149 ASP n 3 150 ARG n 3 151 LEU n 3 152 LEU n 3 153 GLU n 3 154 GLU n 3 155 PHE n 3 156 LEU n 3 157 LYS n 3 158 ALA n 3 159 GLY n 3 160 LYS n 3 161 ILE n 3 162 GLU n 3 163 SER n 3 164 SER n 3 165 PRO n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Monomastix _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain OKE-1 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Monomastix sp.' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 141716 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q8WKW7_MONSK Q8WKW7 3 ;TLQPTEAAYIAGFLDGDGSIYAKLIPRPDYKDIKYQVSLAISFIQRKDKFPYLQDIYDQLGKRGNLRKDRGDGIADYTII GSTHLSIILPDLVPYLRIKKKQANRILHIINLYPQAQKNPSKFLDLVKIVDDVQNLNKRADELKSTNYDRLLEEFLKAGK IESSP ; 6 ? 2 PDB 2FLD 2FLD 1 ? ? ? 3 PDB 2FLD 2FLD 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2FLD A 1 ? 165 ? Q8WKW7 6 ? 170 ? 6 170 2 1 2FLD B 1 ? 165 ? Q8WKW7 6 ? 170 ? 206 370 3 2 2FLD C 1 ? 24 ? 2FLD 501 ? 524 ? 501 524 4 3 2FLD D 1 ? 24 ? 2FLD 551 ? 574 ? 551 574 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2FLD LEU A 23 ? UNP Q8WKW7 LYS 28 'engineered mutation' 28 1 1 2FLD ARG A 78 ? UNP Q8WKW7 THR 83 'engineered mutation' 83 2 2 2FLD LEU B 23 ? UNP Q8WKW7 LYS 28 'engineered mutation' 228 3 2 2FLD ARG B 78 ? UNP Q8WKW7 THR 83 'engineered mutation' 283 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2FLD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.12 _exptl_crystal.density_percent_sol 41.98 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 278.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.00 _exptl_crystal_grow.pdbx_details '30% PEG 400, 100 mM Tris, 50 mM NaCl, 10 mM CaCl2, pH 8.00, VAPOR DIFFUSION, HANGING DROP, temperature 278.0K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.details 1 1 1 '30% PEG 400, 100 mM Tris,50 mM NaCl, 10 mM CaCl2' ? ? ? 1 2 2 '30% PEG 400, 100 mM Tris,50 mM NaCl, 10 mM CaCl2' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2005-12-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'single crystal, cylindrical ben' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 5.0.1' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 5.0.1 _diffrn_source.pdbx_wavelength 1.0 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 2FLD _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 39.500 _reflns.d_resolution_high 2.000 _reflns.number_obs 27855 _reflns.number_all ? _reflns.percent_possible_obs 94.1 _reflns.pdbx_Rmerge_I_obs 0.079 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 22.3 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.100 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_CC_half ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_Rrim_I_all ? # _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.07 _reflns_shell.percent_possible_all 74.2 _reflns_shell.Rmerge_I_obs 0.338 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.0 _reflns_shell.pdbx_redundancy 2.60 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_Rrim_I_all ? # _refine.entry_id 2FLD _refine.ls_number_reflns_obs 26086 _refine.ls_number_reflns_all 54004 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 39.50 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 88.3 _refine.ls_R_factor_obs 0.229 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.229 _refine.ls_R_factor_R_free 0.271 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.300 _refine.ls_number_reflns_R_free 1257 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 38.12 _refine.aniso_B[1][1] -25.75600 _refine.aniso_B[2][2] 12.51300 _refine.aniso_B[3][3] 13.24300 _refine.aniso_B[1][2] 1.35400 _refine.aniso_B[1][3] -3.57500 _refine.aniso_B[2][3] -6.07000 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol 25.02 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1M5X, MUTATED RESIDUES EXCLUDED' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2633 _refine_hist.pdbx_number_atoms_nucleic_acid 978 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 97 _refine_hist.number_atoms_total 3711 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 39.50 # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM ? 'X-RAY DIFFRACTION' 2 DNA-RNA_REP.PARAM ? 'X-RAY DIFFRACTION' 3 ION.PARAM ? 'X-RAY DIFFRACTION' 4 WATER.PARAM ? 'X-RAY DIFFRACTION' 5 WATER_REP.PARAM ? 'X-RAY DIFFRACTION' # _struct.entry_id 2FLD _struct.title 'I-MsoI Re-Designed for Altered DNA Cleavage Specificity' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2FLD _struct_keywords.pdbx_keywords HYDROLASE/DNA _struct_keywords.text 'homing endonuclease, dna, HYDROLASE-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 5 ? H N N 6 ? I N N 6 ? J N N 6 ? K N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLN C 3 ? ASP C 17 ? GLN A 8 ASP A 22 1 ? 15 HELX_P HELX_P2 2 LYS C 49 ? LEU C 60 ? LYS A 54 LEU A 65 1 ? 12 HELX_P HELX_P3 3 GLY C 81 ? VAL C 93 ? GLY A 86 VAL A 98 1 ? 13 HELX_P HELX_P4 4 LYS C 99 ? GLN C 117 ? LYS A 104 GLN A 122 1 ? 19 HELX_P HELX_P5 5 ASN C 119 ? ASN C 137 ? ASN A 124 ASN A 142 1 ? 19 HELX_P HELX_P6 6 THR C 146 ? ALA C 158 ? THR A 151 ALA A 163 1 ? 13 HELX_P HELX_P7 7 GLN D 3 ? ASP D 17 ? GLN B 208 ASP B 222 1 ? 15 HELX_P HELX_P8 8 LYS D 49 ? LEU D 60 ? LYS B 254 LEU B 265 1 ? 12 HELX_P HELX_P9 9 GLY D 81 ? VAL D 93 ? GLY B 286 VAL B 298 1 ? 13 HELX_P HELX_P10 10 LYS D 99 ? GLN D 117 ? LYS B 304 GLN B 322 1 ? 19 HELX_P HELX_P11 11 ASN D 119 ? ASN D 137 ? ASN B 324 ASN B 342 1 ? 19 HELX_P HELX_P12 12 THR D 146 ? ALA D 158 ? THR B 351 ALA B 363 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? H HOH . O ? ? ? 1_555 G CA . CA ? ? C HOH 34 B CA 602 1_555 ? ? ? ? ? ? ? 2.449 ? ? metalc2 metalc ? ? A DA 14 OP1 ? ? ? 1_555 F CA . CA ? ? C DA 514 A CA 601 1_555 ? ? ? ? ? ? ? 2.260 ? ? metalc3 metalc ? ? A DG 15 OP2 ? ? ? 1_555 E NA . NA ? ? C DG 515 C NA 603 1_555 ? ? ? ? ? ? ? 2.242 ? ? metalc4 metalc ? ? A DG 15 OP2 ? ? ? 1_555 G CA . CA ? ? C DG 515 B CA 602 1_555 ? ? ? ? ? ? ? 2.418 ? ? metalc5 metalc ? ? E NA . NA ? ? ? 1_555 B DC 14 "O3'" ? ? C NA 603 D DC 564 1_555 ? ? ? ? ? ? ? 2.742 ? ? metalc6 metalc ? ? E NA . NA ? ? ? 1_555 B DG 15 OP2 ? ? C NA 603 D DG 565 1_555 ? ? ? ? ? ? ? 2.352 ? ? metalc7 metalc ? ? E NA . NA ? ? ? 1_555 C ASP 17 OD1 ? ? C NA 603 A ASP 22 1_555 ? ? ? ? ? ? ? 2.440 ? ? metalc8 metalc ? ? E NA . NA ? ? ? 1_555 D ASP 17 OD1 ? ? C NA 603 B ASP 222 1_555 ? ? ? ? ? ? ? 2.266 ? ? metalc9 metalc ? ? B DC 14 OP1 ? ? ? 1_555 G CA . CA ? ? D DC 564 B CA 602 1_555 ? ? ? ? ? ? ? 2.244 ? ? metalc10 metalc ? ? B DG 15 OP2 ? ? ? 1_555 F CA . CA ? ? D DG 565 A CA 601 1_555 ? ? ? ? ? ? ? 2.394 ? ? metalc11 metalc ? ? C GLY 16 O ? ? ? 1_555 G CA . CA ? ? A GLY 21 B CA 602 1_555 ? ? ? ? ? ? ? 2.535 ? ? metalc12 metalc ? ? C ASP 17 OD1 ? ? ? 1_555 F CA . CA ? ? A ASP 22 A CA 601 1_555 ? ? ? ? ? ? ? 2.776 ? ? metalc13 metalc ? ? C ASP 17 OD2 ? ? ? 1_555 F CA . CA ? ? A ASP 22 A CA 601 1_555 ? ? ? ? ? ? ? 2.393 ? ? metalc14 metalc ? ? F CA . CA ? ? ? 1_555 K HOH . O ? ? A CA 601 B HOH 9 1_555 ? ? ? ? ? ? ? 2.311 ? ? metalc15 metalc ? ? F CA . CA ? ? ? 1_555 D GLY 16 O ? ? A CA 601 B GLY 221 1_555 ? ? ? ? ? ? ? 2.457 ? ? metalc16 metalc ? ? J HOH . O ? ? ? 1_555 G CA . CA ? ? A HOH 607 B CA 602 1_555 ? ? ? ? ? ? ? 2.238 ? ? metalc17 metalc ? ? D ASP 17 OD2 ? ? ? 1_555 G CA . CA ? ? B ASP 222 B CA 602 1_555 ? ? ? ? ? ? ? 2.564 ? ? metalc18 metalc ? ? D ASP 17 OD1 ? ? ? 1_555 G CA . CA ? ? B ASP 222 B CA 602 1_555 ? ? ? ? ? ? ? 2.775 ? ? hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DC 24 N3 ? ? C DG 501 D DC 574 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DC 24 O2 ? ? C DG 501 D DC 574 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DC 24 N4 ? ? C DG 501 D DC 574 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 23 N1 ? ? C DC 502 D DG 573 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 23 O6 ? ? C DC 502 D DG 573 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 23 N2 ? ? C DC 502 D DG 573 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 3 N1 ? ? ? 1_555 B DT 22 N3 ? ? C DA 503 D DT 572 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 3 N6 ? ? ? 1_555 B DT 22 O4 ? ? C DA 503 D DT 572 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 21 N3 ? ? C DG 504 D DC 571 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 21 O2 ? ? C DG 504 D DC 571 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 21 N4 ? ? C DG 504 D DC 571 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 5 N1 ? ? ? 1_555 B DT 20 N3 ? ? C DA 505 D DT 570 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B DT 20 O4 ? ? C DA 505 D DT 570 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 19 N3 ? ? C DA 506 D DT 569 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 19 O4 ? ? C DA 506 D DT 569 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 7 N1 ? ? ? 1_555 B DC 18 N3 ? ? C DG 507 D DC 568 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 7 N2 ? ? ? 1_555 B DC 18 O2 ? ? C DG 507 D DC 568 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 7 O6 ? ? ? 1_555 B DC 18 N4 ? ? C DG 507 D DC 568 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 8 N1 ? ? ? 1_555 B DC 17 N3 ? ? C DG 508 D DC 567 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 8 N2 ? ? ? 1_555 B DC 17 O2 ? ? C DG 508 D DC 567 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 8 O6 ? ? ? 1_555 B DC 17 N4 ? ? C DG 508 D DC 567 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DT 9 N3 ? ? ? 1_555 B DA 16 N1 ? ? C DT 509 D DA 566 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DT 9 O4 ? ? ? 1_555 B DA 16 N6 ? ? C DT 509 D DA 566 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 10 N3 ? ? ? 1_555 B DG 15 N1 ? ? C DC 510 D DG 565 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DC 10 N4 ? ? ? 1_555 B DG 15 O6 ? ? C DC 510 D DG 565 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DC 10 O2 ? ? ? 1_555 B DG 15 N2 ? ? C DC 510 D DG 565 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 11 N1 ? ? ? 1_555 B DC 14 N3 ? ? C DG 511 D DC 564 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 11 N2 ? ? ? 1_555 B DC 14 O2 ? ? C DG 511 D DC 564 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DG 11 O6 ? ? ? 1_555 B DC 14 N4 ? ? C DG 511 D DC 564 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DT 12 N3 ? ? ? 1_555 B DA 13 N1 ? ? C DT 512 D DA 563 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DT 12 O4 ? ? ? 1_555 B DA 13 N6 ? ? C DT 512 D DA 563 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DG 13 N1 ? ? ? 1_555 B DC 12 N3 ? ? C DG 513 D DC 562 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DG 13 N2 ? ? ? 1_555 B DC 12 O2 ? ? C DG 513 D DC 562 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DG 13 O6 ? ? ? 1_555 B DC 12 N4 ? ? C DG 513 D DC 562 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DA 14 N1 ? ? ? 1_555 B DT 11 N3 ? ? C DA 514 D DT 561 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DA 14 N6 ? ? ? 1_555 B DT 11 O4 ? ? C DA 514 D DT 561 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DG 15 N1 ? ? ? 1_555 B DC 10 N3 ? ? C DG 515 D DC 560 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DG 15 N2 ? ? ? 1_555 B DC 10 O2 ? ? C DG 515 D DC 560 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DG 15 O6 ? ? ? 1_555 B DC 10 N4 ? ? C DG 515 D DC 560 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DA 16 N1 ? ? ? 1_555 B DT 9 N3 ? ? C DA 516 D DT 559 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DA 16 N6 ? ? ? 1_555 B DT 9 O4 ? ? C DA 516 D DT 559 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DC 17 N3 ? ? ? 1_555 B DG 8 N1 ? ? C DC 517 D DG 558 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DC 17 N4 ? ? ? 1_555 B DG 8 O6 ? ? C DC 517 D DG 558 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A DC 17 O2 ? ? ? 1_555 B DG 8 N2 ? ? C DC 517 D DG 558 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A DC 18 N3 ? ? ? 1_555 B DG 7 N1 ? ? C DC 518 D DG 557 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A DC 18 N4 ? ? ? 1_555 B DG 7 O6 ? ? C DC 518 D DG 557 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A DC 18 O2 ? ? ? 1_555 B DG 7 N2 ? ? C DC 518 D DG 557 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A DG 19 N1 ? ? ? 1_555 B DC 6 N3 ? ? C DG 519 D DC 556 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A DG 19 N2 ? ? ? 1_555 B DC 6 O2 ? ? C DG 519 D DC 556 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A DG 19 O6 ? ? ? 1_555 B DC 6 N4 ? ? C DG 519 D DC 556 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A DT 20 N3 ? ? ? 1_555 B DA 5 N1 ? ? C DT 520 D DA 555 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A DT 20 O4 ? ? ? 1_555 B DA 5 N6 ? ? C DT 520 D DA 555 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A DT 21 N3 ? ? ? 1_555 B DA 4 N1 ? ? C DT 521 D DA 554 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A DT 21 O4 ? ? ? 1_555 B DA 4 N6 ? ? C DT 521 D DA 554 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A DC 22 N3 ? ? ? 1_555 B DG 3 N1 ? ? C DC 522 D DG 553 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A DC 22 N4 ? ? ? 1_555 B DG 3 O6 ? ? C DC 522 D DG 553 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A DC 22 O2 ? ? ? 1_555 B DG 3 N2 ? ? C DC 522 D DG 553 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A DC 23 N3 ? ? ? 1_555 B DG 2 N1 ? ? C DC 523 D DG 552 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A DC 23 N4 ? ? ? 1_555 B DG 2 O6 ? ? C DC 523 D DG 552 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A DC 23 O2 ? ? ? 1_555 B DG 2 N2 ? ? C DC 523 D DG 552 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A DG 24 N1 ? ? ? 1_555 B DC 1 N3 ? ? C DG 524 D DC 551 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A DG 24 N2 ? ? ? 1_555 B DC 1 O2 ? ? C DG 524 D DC 551 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A DG 24 O6 ? ? ? 1_555 B DC 1 N4 ? ? C DG 524 D DC 551 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY C 18 ? PRO C 26 ? GLY A 23 PRO A 31 A 2 TYR C 35 ? ARG C 46 ? TYR A 40 ARG A 51 A 3 ILE C 74 ? ILE C 80 ? ILE A 79 ILE A 85 A 4 ASN C 65 ? ARG C 67 ? ASN A 70 ARG A 72 B 1 GLY D 18 ? PRO D 26 ? GLY B 223 PRO B 231 B 2 TYR D 35 ? ARG D 46 ? TYR B 240 ARG B 251 B 3 ILE D 74 ? ILE D 80 ? ILE B 279 ILE B 285 B 4 ASN D 65 ? ARG D 67 ? ASN B 270 ARG B 272 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE C 25 ? N ILE A 30 O GLN C 36 ? O GLN A 41 A 2 3 N GLN C 45 ? N GLN A 50 O ALA C 75 ? O ALA A 80 A 3 4 O ARG C 78 ? O ARG A 83 N ASN C 65 ? N ASN A 70 B 1 2 N ILE D 25 ? N ILE B 230 O GLN D 36 ? O GLN B 241 B 2 3 N ILE D 41 ? N ILE B 246 O ILE D 79 ? O ILE B 284 B 3 4 O ARG D 78 ? O ARG B 283 N ASN D 65 ? N ASN B 270 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software C NA 603 ? 7 'BINDING SITE FOR RESIDUE NA C 603' AC2 Software A CA 601 ? 5 'BINDING SITE FOR RESIDUE CA A 601' AC3 Software B CA 602 ? 7 'BINDING SITE FOR RESIDUE CA B 602' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 ASP C 17 ? ASP A 22 . ? 1_555 ? 2 AC1 7 ASP D 17 ? ASP B 222 . ? 1_555 ? 3 AC1 7 CA G . ? CA B 602 . ? 1_555 ? 4 AC1 7 DA A 14 ? DA C 514 . ? 1_555 ? 5 AC1 7 DG A 15 ? DG C 515 . ? 1_555 ? 6 AC1 7 DC B 14 ? DC D 564 . ? 1_555 ? 7 AC1 7 DG B 15 ? DG D 565 . ? 1_555 ? 8 AC2 5 ASP C 17 ? ASP A 22 . ? 1_555 ? 9 AC2 5 HOH K . ? HOH B 9 . ? 1_555 ? 10 AC2 5 GLY D 16 ? GLY B 221 . ? 1_555 ? 11 AC2 5 DA A 14 ? DA C 514 . ? 1_555 ? 12 AC2 5 DG B 15 ? DG D 565 . ? 1_555 ? 13 AC3 7 GLY C 16 ? GLY A 21 . ? 1_555 ? 14 AC3 7 HOH J . ? HOH A 607 . ? 1_555 ? 15 AC3 7 ASP D 17 ? ASP B 222 . ? 1_555 ? 16 AC3 7 HOH H . ? HOH C 34 . ? 1_555 ? 17 AC3 7 DG A 15 ? DG C 515 . ? 1_555 ? 18 AC3 7 NA E . ? NA C 603 . ? 1_555 ? 19 AC3 7 DC B 14 ? DC D 564 . ? 1_555 ? # _atom_sites.entry_id 2FLD _atom_sites.fract_transf_matrix[1][1] 0.023832 _atom_sites.fract_transf_matrix[1][2] -0.008435 _atom_sites.fract_transf_matrix[1][3] -0.005852 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024680 _atom_sites.fract_transf_matrix[2][3] -0.005720 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015061 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N NA O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 501 501 DG G C . n A 1 2 DC 2 502 502 DC C C . n A 1 3 DA 3 503 503 DA A C . n A 1 4 DG 4 504 504 DG G C . n A 1 5 DA 5 505 505 DA A C . n A 1 6 DA 6 506 506 DA A C . n A 1 7 DG 7 507 507 DG G C . n A 1 8 DG 8 508 508 DG G C . n A 1 9 DT 9 509 509 DT T C . n A 1 10 DC 10 510 510 DC C C . n A 1 11 DG 11 511 511 DG G C . n A 1 12 DT 12 512 512 DT T C . n A 1 13 DG 13 513 513 DG G C . n A 1 14 DA 14 514 514 DA A C . n A 1 15 DG 15 515 515 DG G C . n A 1 16 DA 16 516 516 DA A C . n A 1 17 DC 17 517 517 DC C C . n A 1 18 DC 18 518 518 DC C C . n A 1 19 DG 19 519 519 DG G C . n A 1 20 DT 20 520 520 DT T C . n A 1 21 DT 21 521 521 DT T C . n A 1 22 DC 22 522 522 DC C C . n A 1 23 DC 23 523 523 DC C C . n A 1 24 DG 24 524 524 DG G C . n B 2 1 DC 1 551 551 DC C D . n B 2 2 DG 2 552 552 DG G D . n B 2 3 DG 3 553 553 DG G D . n B 2 4 DA 4 554 554 DA A D . n B 2 5 DA 5 555 555 DA A D . n B 2 6 DC 6 556 556 DC C D . n B 2 7 DG 7 557 557 DG G D . n B 2 8 DG 8 558 558 DG G D . n B 2 9 DT 9 559 559 DT T D . n B 2 10 DC 10 560 560 DC C D . n B 2 11 DT 11 561 561 DT T D . n B 2 12 DC 12 562 562 DC C D . n B 2 13 DA 13 563 563 DA A D . n B 2 14 DC 14 564 564 DC C D . n B 2 15 DG 15 565 565 DG G D . n B 2 16 DA 16 566 566 DA A D . n B 2 17 DC 17 567 567 DC C D . n B 2 18 DC 18 568 568 DC C D . n B 2 19 DT 19 569 569 DT T D . n B 2 20 DT 20 570 570 DT T D . n B 2 21 DC 21 571 571 DC C D . n B 2 22 DT 22 572 572 DT T D . n B 2 23 DG 23 573 573 DG G D . n B 2 24 DC 24 574 574 DC C D . n C 3 1 THR 1 6 6 THR THR A . n C 3 2 LEU 2 7 7 LEU LEU A . n C 3 3 GLN 3 8 8 GLN GLN A . n C 3 4 PRO 4 9 9 PRO PRO A . n C 3 5 THR 5 10 10 THR THR A . n C 3 6 GLU 6 11 11 GLU GLU A . n C 3 7 ALA 7 12 12 ALA ALA A . n C 3 8 ALA 8 13 13 ALA ALA A . n C 3 9 TYR 9 14 14 TYR TYR A . n C 3 10 ILE 10 15 15 ILE ILE A . n C 3 11 ALA 11 16 16 ALA ALA A . n C 3 12 GLY 12 17 17 GLY GLY A . n C 3 13 PHE 13 18 18 PHE PHE A . n C 3 14 LEU 14 19 19 LEU LEU A . n C 3 15 ASP 15 20 20 ASP ASP A . n C 3 16 GLY 16 21 21 GLY GLY A . n C 3 17 ASP 17 22 22 ASP ASP A . n C 3 18 GLY 18 23 23 GLY GLY A . n C 3 19 SER 19 24 24 SER SER A . n C 3 20 ILE 20 25 25 ILE ILE A . n C 3 21 TYR 21 26 26 TYR TYR A . n C 3 22 ALA 22 27 27 ALA ALA A . n C 3 23 LEU 23 28 28 LEU LEU A . n C 3 24 LEU 24 29 29 LEU LEU A . n C 3 25 ILE 25 30 30 ILE ILE A . n C 3 26 PRO 26 31 31 PRO PRO A . n C 3 27 ARG 27 32 32 ARG ARG A . n C 3 28 PRO 28 33 33 PRO PRO A . n C 3 29 ASP 29 34 34 ASP ASP A . n C 3 30 TYR 30 35 35 TYR TYR A . n C 3 31 LYS 31 36 36 LYS LYS A . n C 3 32 ASP 32 37 37 ASP ASP A . n C 3 33 ILE 33 38 38 ILE ILE A . n C 3 34 LYS 34 39 39 LYS LYS A . n C 3 35 TYR 35 40 40 TYR TYR A . n C 3 36 GLN 36 41 41 GLN GLN A . n C 3 37 VAL 37 42 42 VAL VAL A . n C 3 38 SER 38 43 43 SER SER A . n C 3 39 LEU 39 44 44 LEU LEU A . n C 3 40 ALA 40 45 45 ALA ALA A . n C 3 41 ILE 41 46 46 ILE ILE A . n C 3 42 SER 42 47 47 SER SER A . n C 3 43 PHE 43 48 48 PHE PHE A . n C 3 44 ILE 44 49 49 ILE ILE A . n C 3 45 GLN 45 50 50 GLN GLN A . n C 3 46 ARG 46 51 51 ARG ARG A . n C 3 47 LYS 47 52 52 LYS LYS A . n C 3 48 ASP 48 53 53 ASP ASP A . n C 3 49 LYS 49 54 54 LYS LYS A . n C 3 50 PHE 50 55 55 PHE PHE A . n C 3 51 PRO 51 56 56 PRO PRO A . n C 3 52 TYR 52 57 57 TYR TYR A . n C 3 53 LEU 53 58 58 LEU LEU A . n C 3 54 GLN 54 59 59 GLN GLN A . n C 3 55 ASP 55 60 60 ASP ASP A . n C 3 56 ILE 56 61 61 ILE ILE A . n C 3 57 TYR 57 62 62 TYR TYR A . n C 3 58 ASP 58 63 63 ASP ASP A . n C 3 59 GLN 59 64 64 GLN GLN A . n C 3 60 LEU 60 65 65 LEU LEU A . n C 3 61 GLY 61 66 66 GLY GLY A . n C 3 62 LYS 62 67 67 LYS LYS A . n C 3 63 ARG 63 68 68 ARG ARG A . n C 3 64 GLY 64 69 69 GLY GLY A . n C 3 65 ASN 65 70 70 ASN ASN A . n C 3 66 LEU 66 71 71 LEU LEU A . n C 3 67 ARG 67 72 72 ARG ARG A . n C 3 68 LYS 68 73 73 LYS LYS A . n C 3 69 ASP 69 74 74 ASP ASP A . n C 3 70 ARG 70 75 75 ARG ARG A . n C 3 71 GLY 71 76 76 GLY GLY A . n C 3 72 ASP 72 77 77 ASP ASP A . n C 3 73 GLY 73 78 78 GLY GLY A . n C 3 74 ILE 74 79 79 ILE ILE A . n C 3 75 ALA 75 80 80 ALA ALA A . n C 3 76 ASP 76 81 81 ASP ASP A . n C 3 77 TYR 77 82 82 TYR TYR A . n C 3 78 ARG 78 83 83 ARG ARG A . n C 3 79 ILE 79 84 84 ILE ILE A . n C 3 80 ILE 80 85 85 ILE ILE A . n C 3 81 GLY 81 86 86 GLY GLY A . n C 3 82 SER 82 87 87 SER SER A . n C 3 83 THR 83 88 88 THR THR A . n C 3 84 HIS 84 89 89 HIS HIS A . n C 3 85 LEU 85 90 90 LEU LEU A . n C 3 86 SER 86 91 91 SER SER A . n C 3 87 ILE 87 92 92 ILE ILE A . n C 3 88 ILE 88 93 93 ILE ILE A . n C 3 89 LEU 89 94 94 LEU LEU A . n C 3 90 PRO 90 95 95 PRO PRO A . n C 3 91 ASP 91 96 96 ASP ASP A . n C 3 92 LEU 92 97 97 LEU LEU A . n C 3 93 VAL 93 98 98 VAL VAL A . n C 3 94 PRO 94 99 99 PRO PRO A . n C 3 95 TYR 95 100 100 TYR TYR A . n C 3 96 LEU 96 101 101 LEU LEU A . n C 3 97 ARG 97 102 102 ARG ARG A . n C 3 98 ILE 98 103 103 ILE ILE A . n C 3 99 LYS 99 104 104 LYS LYS A . n C 3 100 LYS 100 105 105 LYS LYS A . n C 3 101 LYS 101 106 106 LYS LYS A . n C 3 102 GLN 102 107 107 GLN GLN A . n C 3 103 ALA 103 108 108 ALA ALA A . n C 3 104 ASN 104 109 109 ASN ASN A . n C 3 105 ARG 105 110 110 ARG ARG A . n C 3 106 ILE 106 111 111 ILE ILE A . n C 3 107 LEU 107 112 112 LEU LEU A . n C 3 108 HIS 108 113 113 HIS HIS A . n C 3 109 ILE 109 114 114 ILE ILE A . n C 3 110 ILE 110 115 115 ILE ILE A . n C 3 111 ASN 111 116 116 ASN ASN A . n C 3 112 LEU 112 117 117 LEU LEU A . n C 3 113 TYR 113 118 118 TYR TYR A . n C 3 114 PRO 114 119 119 PRO PRO A . n C 3 115 GLN 115 120 120 GLN GLN A . n C 3 116 ALA 116 121 121 ALA ALA A . n C 3 117 GLN 117 122 122 GLN GLN A . n C 3 118 LYS 118 123 123 LYS LYS A . n C 3 119 ASN 119 124 124 ASN ASN A . n C 3 120 PRO 120 125 125 PRO PRO A . n C 3 121 SER 121 126 126 SER SER A . n C 3 122 LYS 122 127 127 LYS LYS A . n C 3 123 PHE 123 128 128 PHE PHE A . n C 3 124 LEU 124 129 129 LEU LEU A . n C 3 125 ASP 125 130 130 ASP ASP A . n C 3 126 LEU 126 131 131 LEU LEU A . n C 3 127 VAL 127 132 132 VAL VAL A . n C 3 128 LYS 128 133 133 LYS LYS A . n C 3 129 ILE 129 134 134 ILE ILE A . n C 3 130 VAL 130 135 135 VAL VAL A . n C 3 131 ASP 131 136 136 ASP ASP A . n C 3 132 ASP 132 137 137 ASP ASP A . n C 3 133 VAL 133 138 138 VAL VAL A . n C 3 134 GLN 134 139 139 GLN GLN A . n C 3 135 ASN 135 140 140 ASN ASN A . n C 3 136 LEU 136 141 141 LEU LEU A . n C 3 137 ASN 137 142 142 ASN ASN A . n C 3 138 LYS 138 143 143 LYS LYS A . n C 3 139 ARG 139 144 144 ARG ARG A . n C 3 140 ALA 140 145 145 ALA ALA A . n C 3 141 ASP 141 146 146 ASP ASP A . n C 3 142 GLU 142 147 147 GLU GLU A . n C 3 143 LEU 143 148 148 LEU LEU A . n C 3 144 LYS 144 149 149 LYS LYS A . n C 3 145 SER 145 150 150 SER SER A . n C 3 146 THR 146 151 151 THR THR A . n C 3 147 ASN 147 152 152 ASN ASN A . n C 3 148 TYR 148 153 153 TYR TYR A . n C 3 149 ASP 149 154 154 ASP ASP A . n C 3 150 ARG 150 155 155 ARG ARG A . n C 3 151 LEU 151 156 156 LEU LEU A . n C 3 152 LEU 152 157 157 LEU LEU A . n C 3 153 GLU 153 158 158 GLU GLU A . n C 3 154 GLU 154 159 159 GLU GLU A . n C 3 155 PHE 155 160 160 PHE PHE A . n C 3 156 LEU 156 161 161 LEU LEU A . n C 3 157 LYS 157 162 162 LYS LYS A . n C 3 158 ALA 158 163 163 ALA ALA A . n C 3 159 GLY 159 164 164 GLY GLY A . n C 3 160 LYS 160 165 165 LYS LYS A . n C 3 161 ILE 161 166 166 ILE ILE A . n C 3 162 GLU 162 167 ? ? ? A . n C 3 163 SER 163 168 ? ? ? A . n C 3 164 SER 164 169 ? ? ? A . n C 3 165 PRO 165 170 ? ? ? A . n D 3 1 THR 1 206 206 THR THR B . n D 3 2 LEU 2 207 207 LEU LEU B . n D 3 3 GLN 3 208 208 GLN GLN B . n D 3 4 PRO 4 209 209 PRO PRO B . n D 3 5 THR 5 210 210 THR THR B . n D 3 6 GLU 6 211 211 GLU GLU B . n D 3 7 ALA 7 212 212 ALA ALA B . n D 3 8 ALA 8 213 213 ALA ALA B . n D 3 9 TYR 9 214 214 TYR TYR B . n D 3 10 ILE 10 215 215 ILE ILE B . n D 3 11 ALA 11 216 216 ALA ALA B . n D 3 12 GLY 12 217 217 GLY GLY B . n D 3 13 PHE 13 218 218 PHE PHE B . n D 3 14 LEU 14 219 219 LEU LEU B . n D 3 15 ASP 15 220 220 ASP ASP B . n D 3 16 GLY 16 221 221 GLY GLY B . n D 3 17 ASP 17 222 222 ASP ASP B . n D 3 18 GLY 18 223 223 GLY GLY B . n D 3 19 SER 19 224 224 SER SER B . n D 3 20 ILE 20 225 225 ILE ILE B . n D 3 21 TYR 21 226 226 TYR TYR B . n D 3 22 ALA 22 227 227 ALA ALA B . n D 3 23 LEU 23 228 228 LEU LEU B . n D 3 24 LEU 24 229 229 LEU LEU B . n D 3 25 ILE 25 230 230 ILE ILE B . n D 3 26 PRO 26 231 231 PRO PRO B . n D 3 27 ARG 27 232 232 ARG ARG B . n D 3 28 PRO 28 233 233 PRO PRO B . n D 3 29 ASP 29 234 234 ASP ASP B . n D 3 30 TYR 30 235 235 TYR TYR B . n D 3 31 LYS 31 236 236 LYS LYS B . n D 3 32 ASP 32 237 237 ASP ASP B . n D 3 33 ILE 33 238 238 ILE ILE B . n D 3 34 LYS 34 239 239 LYS LYS B . n D 3 35 TYR 35 240 240 TYR TYR B . n D 3 36 GLN 36 241 241 GLN GLN B . n D 3 37 VAL 37 242 242 VAL VAL B . n D 3 38 SER 38 243 243 SER SER B . n D 3 39 LEU 39 244 244 LEU LEU B . n D 3 40 ALA 40 245 245 ALA ALA B . n D 3 41 ILE 41 246 246 ILE ILE B . n D 3 42 SER 42 247 247 SER SER B . n D 3 43 PHE 43 248 248 PHE PHE B . n D 3 44 ILE 44 249 249 ILE ILE B . n D 3 45 GLN 45 250 250 GLN GLN B . n D 3 46 ARG 46 251 251 ARG ARG B . n D 3 47 LYS 47 252 252 LYS LYS B . n D 3 48 ASP 48 253 253 ASP ASP B . n D 3 49 LYS 49 254 254 LYS LYS B . n D 3 50 PHE 50 255 255 PHE PHE B . n D 3 51 PRO 51 256 256 PRO PRO B . n D 3 52 TYR 52 257 257 TYR TYR B . n D 3 53 LEU 53 258 258 LEU LEU B . n D 3 54 GLN 54 259 259 GLN GLN B . n D 3 55 ASP 55 260 260 ASP ASP B . n D 3 56 ILE 56 261 261 ILE ILE B . n D 3 57 TYR 57 262 262 TYR TYR B . n D 3 58 ASP 58 263 263 ASP ASP B . n D 3 59 GLN 59 264 264 GLN GLN B . n D 3 60 LEU 60 265 265 LEU LEU B . n D 3 61 GLY 61 266 266 GLY GLY B . n D 3 62 LYS 62 267 267 LYS LYS B . n D 3 63 ARG 63 268 268 ARG ARG B . n D 3 64 GLY 64 269 269 GLY GLY B . n D 3 65 ASN 65 270 270 ASN ASN B . n D 3 66 LEU 66 271 271 LEU LEU B . n D 3 67 ARG 67 272 272 ARG ARG B . n D 3 68 LYS 68 273 273 LYS LYS B . n D 3 69 ASP 69 274 274 ASP ASP B . n D 3 70 ARG 70 275 275 ARG ARG B . n D 3 71 GLY 71 276 276 GLY GLY B . n D 3 72 ASP 72 277 277 ASP ASP B . n D 3 73 GLY 73 278 278 GLY GLY B . n D 3 74 ILE 74 279 279 ILE ILE B . n D 3 75 ALA 75 280 280 ALA ALA B . n D 3 76 ASP 76 281 281 ASP ASP B . n D 3 77 TYR 77 282 282 TYR TYR B . n D 3 78 ARG 78 283 283 ARG ARG B . n D 3 79 ILE 79 284 284 ILE ILE B . n D 3 80 ILE 80 285 285 ILE ILE B . n D 3 81 GLY 81 286 286 GLY GLY B . n D 3 82 SER 82 287 287 SER SER B . n D 3 83 THR 83 288 288 THR THR B . n D 3 84 HIS 84 289 289 HIS HIS B . n D 3 85 LEU 85 290 290 LEU LEU B . n D 3 86 SER 86 291 291 SER SER B . n D 3 87 ILE 87 292 292 ILE ILE B . n D 3 88 ILE 88 293 293 ILE ILE B . n D 3 89 LEU 89 294 294 LEU LEU B . n D 3 90 PRO 90 295 295 PRO PRO B . n D 3 91 ASP 91 296 296 ASP ASP B . n D 3 92 LEU 92 297 297 LEU LEU B . n D 3 93 VAL 93 298 298 VAL VAL B . n D 3 94 PRO 94 299 299 PRO PRO B . n D 3 95 TYR 95 300 300 TYR TYR B . n D 3 96 LEU 96 301 301 LEU LEU B . n D 3 97 ARG 97 302 302 ARG ARG B . n D 3 98 ILE 98 303 303 ILE ILE B . n D 3 99 LYS 99 304 304 LYS LYS B . n D 3 100 LYS 100 305 305 LYS LYS B . n D 3 101 LYS 101 306 306 LYS LYS B . n D 3 102 GLN 102 307 307 GLN GLN B . n D 3 103 ALA 103 308 308 ALA ALA B . n D 3 104 ASN 104 309 309 ASN ASN B . n D 3 105 ARG 105 310 310 ARG ARG B . n D 3 106 ILE 106 311 311 ILE ILE B . n D 3 107 LEU 107 312 312 LEU LEU B . n D 3 108 HIS 108 313 313 HIS HIS B . n D 3 109 ILE 109 314 314 ILE ILE B . n D 3 110 ILE 110 315 315 ILE ILE B . n D 3 111 ASN 111 316 316 ASN ASN B . n D 3 112 LEU 112 317 317 LEU LEU B . n D 3 113 TYR 113 318 318 TYR TYR B . n D 3 114 PRO 114 319 319 PRO PRO B . n D 3 115 GLN 115 320 320 GLN GLN B . n D 3 116 ALA 116 321 321 ALA ALA B . n D 3 117 GLN 117 322 322 GLN GLN B . n D 3 118 LYS 118 323 323 LYS LYS B . n D 3 119 ASN 119 324 324 ASN ASN B . n D 3 120 PRO 120 325 325 PRO PRO B . n D 3 121 SER 121 326 326 SER SER B . n D 3 122 LYS 122 327 327 LYS LYS B . n D 3 123 PHE 123 328 328 PHE PHE B . n D 3 124 LEU 124 329 329 LEU LEU B . n D 3 125 ASP 125 330 330 ASP ASP B . n D 3 126 LEU 126 331 331 LEU LEU B . n D 3 127 VAL 127 332 332 VAL VAL B . n D 3 128 LYS 128 333 333 LYS LYS B . n D 3 129 ILE 129 334 334 ILE ILE B . n D 3 130 VAL 130 335 335 VAL VAL B . n D 3 131 ASP 131 336 336 ASP ASP B . n D 3 132 ASP 132 337 337 ASP ASP B . n D 3 133 VAL 133 338 338 VAL VAL B . n D 3 134 GLN 134 339 339 GLN GLN B . n D 3 135 ASN 135 340 340 ASN ASN B . n D 3 136 LEU 136 341 341 LEU LEU B . n D 3 137 ASN 137 342 342 ASN ASN B . n D 3 138 LYS 138 343 343 LYS LYS B . n D 3 139 ARG 139 344 344 ARG ARG B . n D 3 140 ALA 140 345 345 ALA ALA B . n D 3 141 ASP 141 346 346 ASP ASP B . n D 3 142 GLU 142 347 347 GLU GLU B . n D 3 143 LEU 143 348 348 LEU LEU B . n D 3 144 LYS 144 349 349 LYS LYS B . n D 3 145 SER 145 350 350 SER SER B . n D 3 146 THR 146 351 351 THR THR B . n D 3 147 ASN 147 352 352 ASN ASN B . n D 3 148 TYR 148 353 353 TYR TYR B . n D 3 149 ASP 149 354 354 ASP ASP B . n D 3 150 ARG 150 355 355 ARG ARG B . n D 3 151 LEU 151 356 356 LEU LEU B . n D 3 152 LEU 152 357 357 LEU LEU B . n D 3 153 GLU 153 358 358 GLU GLU B . n D 3 154 GLU 154 359 359 GLU GLU B . n D 3 155 PHE 155 360 360 PHE PHE B . n D 3 156 LEU 156 361 361 LEU LEU B . n D 3 157 LYS 157 362 362 LYS LYS B . n D 3 158 ALA 158 363 363 ALA ALA B . n D 3 159 GLY 159 364 364 GLY GLY B . n D 3 160 LYS 160 365 365 LYS LYS B . n D 3 161 ILE 161 366 366 ILE ILE B . n D 3 162 GLU 162 367 367 GLU GLU B . n D 3 163 SER 163 368 368 SER SER B . n D 3 164 SER 164 369 ? ? ? B . n D 3 165 PRO 165 370 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 NA 1 603 603 NA NA C . F 5 CA 1 601 601 CA OC2 A . G 5 CA 1 602 602 CA OC2 B . H 6 HOH 1 3 3 HOH HOH C . H 6 HOH 2 8 8 HOH HOH C . H 6 HOH 3 12 12 HOH HOH C . H 6 HOH 4 17 17 HOH HOH C . H 6 HOH 5 20 20 HOH HOH C . H 6 HOH 6 23 23 HOH HOH C . H 6 HOH 7 27 27 HOH HOH C . H 6 HOH 8 34 34 HOH HOH C . H 6 HOH 9 42 42 HOH HOH C . H 6 HOH 10 48 48 HOH HOH C . H 6 HOH 11 58 58 HOH HOH C . H 6 HOH 12 78 78 HOH HOH C . H 6 HOH 13 89 89 HOH HOH C . H 6 HOH 14 94 94 HOH HOH C . H 6 HOH 15 96 96 HOH HOH C . H 6 HOH 16 97 97 HOH HOH C . I 6 HOH 1 11 11 HOH HOH D . I 6 HOH 2 15 15 HOH HOH D . I 6 HOH 3 18 18 HOH HOH D . I 6 HOH 4 24 24 HOH HOH D . I 6 HOH 5 31 31 HOH HOH D . I 6 HOH 6 33 33 HOH HOH D . I 6 HOH 7 39 39 HOH HOH D . I 6 HOH 8 41 41 HOH HOH D . I 6 HOH 9 47 47 HOH HOH D . I 6 HOH 10 70 70 HOH HOH D . I 6 HOH 11 75 75 HOH HOH D . I 6 HOH 12 79 79 HOH HOH D . I 6 HOH 13 80 80 HOH HOH D . J 6 HOH 1 602 1 HOH HOH A . J 6 HOH 2 603 4 HOH HOH A . J 6 HOH 3 604 7 HOH HOH A . J 6 HOH 4 605 13 HOH HOH A . J 6 HOH 5 606 14 HOH HOH A . J 6 HOH 6 607 19 HOH HOH A . J 6 HOH 7 608 22 HOH HOH A . J 6 HOH 8 609 25 HOH HOH A . J 6 HOH 9 610 28 HOH HOH A . J 6 HOH 10 611 29 HOH HOH A . J 6 HOH 11 612 32 HOH HOH A . J 6 HOH 12 613 35 HOH HOH A . J 6 HOH 13 614 36 HOH HOH A . J 6 HOH 14 615 38 HOH HOH A . J 6 HOH 15 616 43 HOH HOH A . J 6 HOH 16 617 44 HOH HOH A . J 6 HOH 17 618 45 HOH HOH A . J 6 HOH 18 619 52 HOH HOH A . J 6 HOH 19 620 54 HOH HOH A . J 6 HOH 20 621 57 HOH HOH A . J 6 HOH 21 622 62 HOH HOH A . J 6 HOH 22 623 64 HOH HOH A . J 6 HOH 23 624 65 HOH HOH A . J 6 HOH 24 625 66 HOH HOH A . J 6 HOH 25 626 68 HOH HOH A . J 6 HOH 26 627 74 HOH HOH A . J 6 HOH 27 628 77 HOH HOH A . J 6 HOH 28 629 81 HOH HOH A . J 6 HOH 29 630 84 HOH HOH A . J 6 HOH 30 631 85 HOH HOH A . J 6 HOH 31 632 86 HOH HOH A . J 6 HOH 32 633 90 HOH HOH A . J 6 HOH 33 634 92 HOH HOH A . J 6 HOH 34 635 93 HOH HOH A . J 6 HOH 35 636 95 HOH HOH A . K 6 HOH 1 2 2 HOH HOH B . K 6 HOH 2 5 5 HOH HOH B . K 6 HOH 3 6 6 HOH HOH B . K 6 HOH 4 9 9 HOH HOH B . K 6 HOH 5 10 10 HOH HOH B . K 6 HOH 6 16 16 HOH HOH B . K 6 HOH 7 21 21 HOH HOH B . K 6 HOH 8 26 26 HOH HOH B . K 6 HOH 9 30 30 HOH HOH B . K 6 HOH 10 37 37 HOH HOH B . K 6 HOH 11 40 40 HOH HOH B . K 6 HOH 12 46 46 HOH HOH B . K 6 HOH 13 49 49 HOH HOH B . K 6 HOH 14 50 50 HOH HOH B . K 6 HOH 15 51 51 HOH HOH B . K 6 HOH 16 53 53 HOH HOH B . K 6 HOH 17 55 55 HOH HOH B . K 6 HOH 18 56 56 HOH HOH B . K 6 HOH 19 59 59 HOH HOH B . K 6 HOH 20 60 60 HOH HOH B . K 6 HOH 21 61 61 HOH HOH B . K 6 HOH 22 63 63 HOH HOH B . K 6 HOH 23 67 67 HOH HOH B . K 6 HOH 24 69 69 HOH HOH B . K 6 HOH 25 71 71 HOH HOH B . K 6 HOH 26 72 72 HOH HOH B . K 6 HOH 27 73 73 HOH HOH B . K 6 HOH 28 76 76 HOH HOH B . K 6 HOH 29 82 82 HOH HOH B . K 6 HOH 30 83 83 HOH HOH B . K 6 HOH 31 87 87 HOH HOH B . K 6 HOH 32 88 88 HOH HOH B . K 6 HOH 33 91 91 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? H HOH . ? C HOH 34 ? 1_555 CA ? G CA . ? B CA 602 ? 1_555 OP2 ? A DG 15 ? C DG 515 ? 1_555 82.3 ? 2 O ? H HOH . ? C HOH 34 ? 1_555 CA ? G CA . ? B CA 602 ? 1_555 OP1 ? B DC 14 ? D DC 564 ? 1_555 95.4 ? 3 OP2 ? A DG 15 ? C DG 515 ? 1_555 CA ? G CA . ? B CA 602 ? 1_555 OP1 ? B DC 14 ? D DC 564 ? 1_555 105.2 ? 4 O ? H HOH . ? C HOH 34 ? 1_555 CA ? G CA . ? B CA 602 ? 1_555 O ? C GLY 16 ? A GLY 21 ? 1_555 107.0 ? 5 OP2 ? A DG 15 ? C DG 515 ? 1_555 CA ? G CA . ? B CA 602 ? 1_555 O ? C GLY 16 ? A GLY 21 ? 1_555 74.8 ? 6 OP1 ? B DC 14 ? D DC 564 ? 1_555 CA ? G CA . ? B CA 602 ? 1_555 O ? C GLY 16 ? A GLY 21 ? 1_555 157.3 ? 7 O ? H HOH . ? C HOH 34 ? 1_555 CA ? G CA . ? B CA 602 ? 1_555 O ? J HOH . ? A HOH 607 ? 1_555 88.1 ? 8 OP2 ? A DG 15 ? C DG 515 ? 1_555 CA ? G CA . ? B CA 602 ? 1_555 O ? J HOH . ? A HOH 607 ? 1_555 145.0 ? 9 OP1 ? B DC 14 ? D DC 564 ? 1_555 CA ? G CA . ? B CA 602 ? 1_555 O ? J HOH . ? A HOH 607 ? 1_555 109.1 ? 10 O ? C GLY 16 ? A GLY 21 ? 1_555 CA ? G CA . ? B CA 602 ? 1_555 O ? J HOH . ? A HOH 607 ? 1_555 76.0 ? 11 O ? H HOH . ? C HOH 34 ? 1_555 CA ? G CA . ? B CA 602 ? 1_555 OD2 ? D ASP 17 ? B ASP 222 ? 1_555 154.9 ? 12 OP2 ? A DG 15 ? C DG 515 ? 1_555 CA ? G CA . ? B CA 602 ? 1_555 OD2 ? D ASP 17 ? B ASP 222 ? 1_555 122.7 ? 13 OP1 ? B DC 14 ? D DC 564 ? 1_555 CA ? G CA . ? B CA 602 ? 1_555 OD2 ? D ASP 17 ? B ASP 222 ? 1_555 79.4 ? 14 O ? C GLY 16 ? A GLY 21 ? 1_555 CA ? G CA . ? B CA 602 ? 1_555 OD2 ? D ASP 17 ? B ASP 222 ? 1_555 81.7 ? 15 O ? J HOH . ? A HOH 607 ? 1_555 CA ? G CA . ? B CA 602 ? 1_555 OD2 ? D ASP 17 ? B ASP 222 ? 1_555 70.9 ? 16 O ? H HOH . ? C HOH 34 ? 1_555 CA ? G CA . ? B CA 602 ? 1_555 OD1 ? D ASP 17 ? B ASP 222 ? 1_555 154.8 ? 17 OP2 ? A DG 15 ? C DG 515 ? 1_555 CA ? G CA . ? B CA 602 ? 1_555 OD1 ? D ASP 17 ? B ASP 222 ? 1_555 75.9 ? 18 OP1 ? B DC 14 ? D DC 564 ? 1_555 CA ? G CA . ? B CA 602 ? 1_555 OD1 ? D ASP 17 ? B ASP 222 ? 1_555 78.4 ? 19 O ? C GLY 16 ? A GLY 21 ? 1_555 CA ? G CA . ? B CA 602 ? 1_555 OD1 ? D ASP 17 ? B ASP 222 ? 1_555 79.7 ? 20 O ? J HOH . ? A HOH 607 ? 1_555 CA ? G CA . ? B CA 602 ? 1_555 OD1 ? D ASP 17 ? B ASP 222 ? 1_555 117.1 ? 21 OD2 ? D ASP 17 ? B ASP 222 ? 1_555 CA ? G CA . ? B CA 602 ? 1_555 OD1 ? D ASP 17 ? B ASP 222 ? 1_555 48.5 ? 22 OP1 ? A DA 14 ? C DA 514 ? 1_555 CA ? F CA . ? A CA 601 ? 1_555 OP2 ? B DG 15 ? D DG 565 ? 1_555 101.8 ? 23 OP1 ? A DA 14 ? C DA 514 ? 1_555 CA ? F CA . ? A CA 601 ? 1_555 OD1 ? C ASP 17 ? A ASP 22 ? 1_555 87.5 ? 24 OP2 ? B DG 15 ? D DG 565 ? 1_555 CA ? F CA . ? A CA 601 ? 1_555 OD1 ? C ASP 17 ? A ASP 22 ? 1_555 76.6 ? 25 OP1 ? A DA 14 ? C DA 514 ? 1_555 CA ? F CA . ? A CA 601 ? 1_555 OD2 ? C ASP 17 ? A ASP 22 ? 1_555 86.9 ? 26 OP2 ? B DG 15 ? D DG 565 ? 1_555 CA ? F CA . ? A CA 601 ? 1_555 OD2 ? C ASP 17 ? A ASP 22 ? 1_555 125.5 ? 27 OD1 ? C ASP 17 ? A ASP 22 ? 1_555 CA ? F CA . ? A CA 601 ? 1_555 OD2 ? C ASP 17 ? A ASP 22 ? 1_555 49.8 ? 28 OP1 ? A DA 14 ? C DA 514 ? 1_555 CA ? F CA . ? A CA 601 ? 1_555 O ? K HOH . ? B HOH 9 ? 1_555 96.8 ? 29 OP2 ? B DG 15 ? D DG 565 ? 1_555 CA ? F CA . ? A CA 601 ? 1_555 O ? K HOH . ? B HOH 9 ? 1_555 150.1 ? 30 OD1 ? C ASP 17 ? A ASP 22 ? 1_555 CA ? F CA . ? A CA 601 ? 1_555 O ? K HOH . ? B HOH 9 ? 1_555 127.8 ? 31 OD2 ? C ASP 17 ? A ASP 22 ? 1_555 CA ? F CA . ? A CA 601 ? 1_555 O ? K HOH . ? B HOH 9 ? 1_555 78.4 ? 32 OP1 ? A DA 14 ? C DA 514 ? 1_555 CA ? F CA . ? A CA 601 ? 1_555 O ? D GLY 16 ? B GLY 221 ? 1_555 171.0 ? 33 OP2 ? B DG 15 ? D DG 565 ? 1_555 CA ? F CA . ? A CA 601 ? 1_555 O ? D GLY 16 ? B GLY 221 ? 1_555 76.4 ? 34 OD1 ? C ASP 17 ? A ASP 22 ? 1_555 CA ? F CA . ? A CA 601 ? 1_555 O ? D GLY 16 ? B GLY 221 ? 1_555 83.5 ? 35 OD2 ? C ASP 17 ? A ASP 22 ? 1_555 CA ? F CA . ? A CA 601 ? 1_555 O ? D GLY 16 ? B GLY 221 ? 1_555 87.0 ? 36 O ? K HOH . ? B HOH 9 ? 1_555 CA ? F CA . ? A CA 601 ? 1_555 O ? D GLY 16 ? B GLY 221 ? 1_555 88.6 ? 37 OP2 ? A DG 15 ? C DG 515 ? 1_555 NA ? E NA . ? C NA 603 ? 1_555 "O3'" ? B DC 14 ? D DC 564 ? 1_555 112.4 ? 38 OP2 ? A DG 15 ? C DG 515 ? 1_555 NA ? E NA . ? C NA 603 ? 1_555 OP2 ? B DG 15 ? D DG 565 ? 1_555 153.0 ? 39 "O3'" ? B DC 14 ? D DC 564 ? 1_555 NA ? E NA . ? C NA 603 ? 1_555 OP2 ? B DG 15 ? D DG 565 ? 1_555 57.7 ? 40 OP2 ? A DG 15 ? C DG 515 ? 1_555 NA ? E NA . ? C NA 603 ? 1_555 OD1 ? C ASP 17 ? A ASP 22 ? 1_555 98.8 ? 41 "O3'" ? B DC 14 ? D DC 564 ? 1_555 NA ? E NA . ? C NA 603 ? 1_555 OD1 ? C ASP 17 ? A ASP 22 ? 1_555 141.7 ? 42 OP2 ? B DG 15 ? D DG 565 ? 1_555 NA ? E NA . ? C NA 603 ? 1_555 OD1 ? C ASP 17 ? A ASP 22 ? 1_555 84.4 ? 43 OP2 ? A DG 15 ? C DG 515 ? 1_555 NA ? E NA . ? C NA 603 ? 1_555 OD1 ? D ASP 17 ? B ASP 222 ? 1_555 90.7 ? 44 "O3'" ? B DC 14 ? D DC 564 ? 1_555 NA ? E NA . ? C NA 603 ? 1_555 OD1 ? D ASP 17 ? B ASP 222 ? 1_555 87.7 ? 45 OP2 ? B DG 15 ? D DG 565 ? 1_555 NA ? E NA . ? C NA 603 ? 1_555 OD1 ? D ASP 17 ? B ASP 222 ? 1_555 112.6 ? 46 OD1 ? C ASP 17 ? A ASP 22 ? 1_555 NA ? E NA . ? C NA 603 ? 1_555 OD1 ? D ASP 17 ? B ASP 222 ? 1_555 114.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-06-06 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2019-09-04 6 'Structure model' 1 5 2021-10-20 7 'Structure model' 1 6 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Source and taxonomy' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Data collection' 6 6 'Structure model' 'Database references' 7 6 'Structure model' 'Derived calculations' 8 7 'Structure model' 'Data collection' 9 7 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' reflns 3 5 'Structure model' reflns_shell 4 6 'Structure model' database_2 5 6 'Structure model' pdbx_struct_conn_angle 6 6 'Structure model' struct_conn 7 6 'Structure model' struct_ref_seq_dif 8 6 'Structure model' struct_site 9 7 'Structure model' chem_comp_atom 10 7 'Structure model' chem_comp_bond 11 7 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_reflns.pdbx_Rsym_value' 2 5 'Structure model' '_reflns.pdbx_netI_over_sigmaI' 3 5 'Structure model' '_reflns.percent_possible_obs' 4 5 'Structure model' '_reflns_shell.meanI_over_sigI_obs' 5 5 'Structure model' '_reflns_shell.pdbx_Rsym_value' 6 6 'Structure model' '_database_2.pdbx_DOI' 7 6 'Structure model' '_database_2.pdbx_database_accession' 8 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 9 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 10 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 11 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 12 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 13 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 14 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 15 6 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 16 6 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 17 6 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 18 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 19 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 20 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 21 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 22 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 23 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 24 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 25 6 'Structure model' '_pdbx_struct_conn_angle.value' 26 6 'Structure model' '_struct_conn.pdbx_dist_value' 27 6 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 28 6 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 29 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 30 6 'Structure model' '_struct_conn.ptnr1_label_asym_id' 31 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 32 6 'Structure model' '_struct_conn.ptnr1_label_comp_id' 33 6 'Structure model' '_struct_conn.ptnr1_label_seq_id' 34 6 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 35 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 36 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 37 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' 38 6 'Structure model' '_struct_conn.ptnr2_label_atom_id' 39 6 'Structure model' '_struct_conn.ptnr2_label_comp_id' 40 6 'Structure model' '_struct_conn.ptnr2_label_seq_id' 41 6 'Structure model' '_struct_ref_seq_dif.details' 42 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 43 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 44 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 CNS . ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns.csb.yale.edu/v1.1/ Fortran_77 ? 3 PDB_EXTRACT 1.701 'OCT. 28, 2005' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 4 EPMR . ? ? ? ? phasing ? ? ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 36 ? ? -101.47 -115.32 2 1 LYS A 39 ? ? -77.45 39.96 3 1 ARG A 102 ? ? -116.01 -71.21 4 1 LYS B 236 ? ? -85.48 -108.30 5 1 LYS B 239 ? ? -82.33 39.32 6 1 LYS B 252 ? ? -27.22 -66.17 7 1 ARG B 302 ? ? -121.11 -69.52 8 1 GLN B 322 ? ? -40.34 -75.12 9 1 LYS B 323 ? ? -96.66 30.95 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DA C 514 ? ? 0.064 'SIDE CHAIN' 2 1 DG D 565 ? ? 0.062 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLU 167 ? C GLU 162 2 1 Y 1 A SER 168 ? C SER 163 3 1 Y 1 A SER 169 ? C SER 164 4 1 Y 1 A PRO 170 ? C PRO 165 5 1 Y 1 B SER 369 ? D SER 164 6 1 Y 1 B PRO 370 ? D PRO 165 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 DA OP3 O N N 75 DA P P N N 76 DA OP1 O N N 77 DA OP2 O N N 78 DA "O5'" O N N 79 DA "C5'" C N N 80 DA "C4'" C N R 81 DA "O4'" O N N 82 DA "C3'" C N S 83 DA "O3'" O N N 84 DA "C2'" C N N 85 DA "C1'" C N R 86 DA N9 N Y N 87 DA C8 C Y N 88 DA N7 N Y N 89 DA C5 C Y N 90 DA C6 C Y N 91 DA N6 N N N 92 DA N1 N Y N 93 DA C2 C Y N 94 DA N3 N Y N 95 DA C4 C Y N 96 DA HOP3 H N N 97 DA HOP2 H N N 98 DA "H5'" H N N 99 DA "H5''" H N N 100 DA "H4'" H N N 101 DA "H3'" H N N 102 DA "HO3'" H N N 103 DA "H2'" H N N 104 DA "H2''" H N N 105 DA "H1'" H N N 106 DA H8 H N N 107 DA H61 H N N 108 DA H62 H N N 109 DA H2 H N N 110 DC OP3 O N N 111 DC P P N N 112 DC OP1 O N N 113 DC OP2 O N N 114 DC "O5'" O N N 115 DC "C5'" C N N 116 DC "C4'" C N R 117 DC "O4'" O N N 118 DC "C3'" C N S 119 DC "O3'" O N N 120 DC "C2'" C N N 121 DC "C1'" C N R 122 DC N1 N N N 123 DC C2 C N N 124 DC O2 O N N 125 DC N3 N N N 126 DC C4 C N N 127 DC N4 N N N 128 DC C5 C N N 129 DC C6 C N N 130 DC HOP3 H N N 131 DC HOP2 H N N 132 DC "H5'" H N N 133 DC "H5''" H N N 134 DC "H4'" H N N 135 DC "H3'" H N N 136 DC "HO3'" H N N 137 DC "H2'" H N N 138 DC "H2''" H N N 139 DC "H1'" H N N 140 DC H41 H N N 141 DC H42 H N N 142 DC H5 H N N 143 DC H6 H N N 144 DG OP3 O N N 145 DG P P N N 146 DG OP1 O N N 147 DG OP2 O N N 148 DG "O5'" O N N 149 DG "C5'" C N N 150 DG "C4'" C N R 151 DG "O4'" O N N 152 DG "C3'" C N S 153 DG "O3'" O N N 154 DG "C2'" C N N 155 DG "C1'" C N R 156 DG N9 N Y N 157 DG C8 C Y N 158 DG N7 N Y N 159 DG C5 C Y N 160 DG C6 C N N 161 DG O6 O N N 162 DG N1 N N N 163 DG C2 C N N 164 DG N2 N N N 165 DG N3 N N N 166 DG C4 C Y N 167 DG HOP3 H N N 168 DG HOP2 H N N 169 DG "H5'" H N N 170 DG "H5''" H N N 171 DG "H4'" H N N 172 DG "H3'" H N N 173 DG "HO3'" H N N 174 DG "H2'" H N N 175 DG "H2''" H N N 176 DG "H1'" H N N 177 DG H8 H N N 178 DG H1 H N N 179 DG H21 H N N 180 DG H22 H N N 181 DT OP3 O N N 182 DT P P N N 183 DT OP1 O N N 184 DT OP2 O N N 185 DT "O5'" O N N 186 DT "C5'" C N N 187 DT "C4'" C N R 188 DT "O4'" O N N 189 DT "C3'" C N S 190 DT "O3'" O N N 191 DT "C2'" C N N 192 DT "C1'" C N R 193 DT N1 N N N 194 DT C2 C N N 195 DT O2 O N N 196 DT N3 N N N 197 DT C4 C N N 198 DT O4 O N N 199 DT C5 C N N 200 DT C7 C N N 201 DT C6 C N N 202 DT HOP3 H N N 203 DT HOP2 H N N 204 DT "H5'" H N N 205 DT "H5''" H N N 206 DT "H4'" H N N 207 DT "H3'" H N N 208 DT "HO3'" H N N 209 DT "H2'" H N N 210 DT "H2''" H N N 211 DT "H1'" H N N 212 DT H3 H N N 213 DT H71 H N N 214 DT H72 H N N 215 DT H73 H N N 216 DT H6 H N N 217 GLN N N N N 218 GLN CA C N S 219 GLN C C N N 220 GLN O O N N 221 GLN CB C N N 222 GLN CG C N N 223 GLN CD C N N 224 GLN OE1 O N N 225 GLN NE2 N N N 226 GLN OXT O N N 227 GLN H H N N 228 GLN H2 H N N 229 GLN HA H N N 230 GLN HB2 H N N 231 GLN HB3 H N N 232 GLN HG2 H N N 233 GLN HG3 H N N 234 GLN HE21 H N N 235 GLN HE22 H N N 236 GLN HXT H N N 237 GLU N N N N 238 GLU CA C N S 239 GLU C C N N 240 GLU O O N N 241 GLU CB C N N 242 GLU CG C N N 243 GLU CD C N N 244 GLU OE1 O N N 245 GLU OE2 O N N 246 GLU OXT O N N 247 GLU H H N N 248 GLU H2 H N N 249 GLU HA H N N 250 GLU HB2 H N N 251 GLU HB3 H N N 252 GLU HG2 H N N 253 GLU HG3 H N N 254 GLU HE2 H N N 255 GLU HXT H N N 256 GLY N N N N 257 GLY CA C N N 258 GLY C C N N 259 GLY O O N N 260 GLY OXT O N N 261 GLY H H N N 262 GLY H2 H N N 263 GLY HA2 H N N 264 GLY HA3 H N N 265 GLY HXT H N N 266 HIS N N N N 267 HIS CA C N S 268 HIS C C N N 269 HIS O O N N 270 HIS CB C N N 271 HIS CG C Y N 272 HIS ND1 N Y N 273 HIS CD2 C Y N 274 HIS CE1 C Y N 275 HIS NE2 N Y N 276 HIS OXT O N N 277 HIS H H N N 278 HIS H2 H N N 279 HIS HA H N N 280 HIS HB2 H N N 281 HIS HB3 H N N 282 HIS HD1 H N N 283 HIS HD2 H N N 284 HIS HE1 H N N 285 HIS HE2 H N N 286 HIS HXT H N N 287 HOH O O N N 288 HOH H1 H N N 289 HOH H2 H N N 290 ILE N N N N 291 ILE CA C N S 292 ILE C C N N 293 ILE O O N N 294 ILE CB C N S 295 ILE CG1 C N N 296 ILE CG2 C N N 297 ILE CD1 C N N 298 ILE OXT O N N 299 ILE H H N N 300 ILE H2 H N N 301 ILE HA H N N 302 ILE HB H N N 303 ILE HG12 H N N 304 ILE HG13 H N N 305 ILE HG21 H N N 306 ILE HG22 H N N 307 ILE HG23 H N N 308 ILE HD11 H N N 309 ILE HD12 H N N 310 ILE HD13 H N N 311 ILE HXT H N N 312 LEU N N N N 313 LEU CA C N S 314 LEU C C N N 315 LEU O O N N 316 LEU CB C N N 317 LEU CG C N N 318 LEU CD1 C N N 319 LEU CD2 C N N 320 LEU OXT O N N 321 LEU H H N N 322 LEU H2 H N N 323 LEU HA H N N 324 LEU HB2 H N N 325 LEU HB3 H N N 326 LEU HG H N N 327 LEU HD11 H N N 328 LEU HD12 H N N 329 LEU HD13 H N N 330 LEU HD21 H N N 331 LEU HD22 H N N 332 LEU HD23 H N N 333 LEU HXT H N N 334 LYS N N N N 335 LYS CA C N S 336 LYS C C N N 337 LYS O O N N 338 LYS CB C N N 339 LYS CG C N N 340 LYS CD C N N 341 LYS CE C N N 342 LYS NZ N N N 343 LYS OXT O N N 344 LYS H H N N 345 LYS H2 H N N 346 LYS HA H N N 347 LYS HB2 H N N 348 LYS HB3 H N N 349 LYS HG2 H N N 350 LYS HG3 H N N 351 LYS HD2 H N N 352 LYS HD3 H N N 353 LYS HE2 H N N 354 LYS HE3 H N N 355 LYS HZ1 H N N 356 LYS HZ2 H N N 357 LYS HZ3 H N N 358 LYS HXT H N N 359 NA NA NA N N 360 PHE N N N N 361 PHE CA C N S 362 PHE C C N N 363 PHE O O N N 364 PHE CB C N N 365 PHE CG C Y N 366 PHE CD1 C Y N 367 PHE CD2 C Y N 368 PHE CE1 C Y N 369 PHE CE2 C Y N 370 PHE CZ C Y N 371 PHE OXT O N N 372 PHE H H N N 373 PHE H2 H N N 374 PHE HA H N N 375 PHE HB2 H N N 376 PHE HB3 H N N 377 PHE HD1 H N N 378 PHE HD2 H N N 379 PHE HE1 H N N 380 PHE HE2 H N N 381 PHE HZ H N N 382 PHE HXT H N N 383 PRO N N N N 384 PRO CA C N S 385 PRO C C N N 386 PRO O O N N 387 PRO CB C N N 388 PRO CG C N N 389 PRO CD C N N 390 PRO OXT O N N 391 PRO H H N N 392 PRO HA H N N 393 PRO HB2 H N N 394 PRO HB3 H N N 395 PRO HG2 H N N 396 PRO HG3 H N N 397 PRO HD2 H N N 398 PRO HD3 H N N 399 PRO HXT H N N 400 SER N N N N 401 SER CA C N S 402 SER C C N N 403 SER O O N N 404 SER CB C N N 405 SER OG O N N 406 SER OXT O N N 407 SER H H N N 408 SER H2 H N N 409 SER HA H N N 410 SER HB2 H N N 411 SER HB3 H N N 412 SER HG H N N 413 SER HXT H N N 414 THR N N N N 415 THR CA C N S 416 THR C C N N 417 THR O O N N 418 THR CB C N R 419 THR OG1 O N N 420 THR CG2 C N N 421 THR OXT O N N 422 THR H H N N 423 THR H2 H N N 424 THR HA H N N 425 THR HB H N N 426 THR HG1 H N N 427 THR HG21 H N N 428 THR HG22 H N N 429 THR HG23 H N N 430 THR HXT H N N 431 TYR N N N N 432 TYR CA C N S 433 TYR C C N N 434 TYR O O N N 435 TYR CB C N N 436 TYR CG C Y N 437 TYR CD1 C Y N 438 TYR CD2 C Y N 439 TYR CE1 C Y N 440 TYR CE2 C Y N 441 TYR CZ C Y N 442 TYR OH O N N 443 TYR OXT O N N 444 TYR H H N N 445 TYR H2 H N N 446 TYR HA H N N 447 TYR HB2 H N N 448 TYR HB3 H N N 449 TYR HD1 H N N 450 TYR HD2 H N N 451 TYR HE1 H N N 452 TYR HE2 H N N 453 TYR HH H N N 454 TYR HXT H N N 455 VAL N N N N 456 VAL CA C N S 457 VAL C C N N 458 VAL O O N N 459 VAL CB C N N 460 VAL CG1 C N N 461 VAL CG2 C N N 462 VAL OXT O N N 463 VAL H H N N 464 VAL H2 H N N 465 VAL HA H N N 466 VAL HB H N N 467 VAL HG11 H N N 468 VAL HG12 H N N 469 VAL HG13 H N N 470 VAL HG21 H N N 471 VAL HG22 H N N 472 VAL HG23 H N N 473 VAL HXT H N N 474 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DG OP3 P sing N N 143 DG OP3 HOP3 sing N N 144 DG P OP1 doub N N 145 DG P OP2 sing N N 146 DG P "O5'" sing N N 147 DG OP2 HOP2 sing N N 148 DG "O5'" "C5'" sing N N 149 DG "C5'" "C4'" sing N N 150 DG "C5'" "H5'" sing N N 151 DG "C5'" "H5''" sing N N 152 DG "C4'" "O4'" sing N N 153 DG "C4'" "C3'" sing N N 154 DG "C4'" "H4'" sing N N 155 DG "O4'" "C1'" sing N N 156 DG "C3'" "O3'" sing N N 157 DG "C3'" "C2'" sing N N 158 DG "C3'" "H3'" sing N N 159 DG "O3'" "HO3'" sing N N 160 DG "C2'" "C1'" sing N N 161 DG "C2'" "H2'" sing N N 162 DG "C2'" "H2''" sing N N 163 DG "C1'" N9 sing N N 164 DG "C1'" "H1'" sing N N 165 DG N9 C8 sing Y N 166 DG N9 C4 sing Y N 167 DG C8 N7 doub Y N 168 DG C8 H8 sing N N 169 DG N7 C5 sing Y N 170 DG C5 C6 sing N N 171 DG C5 C4 doub Y N 172 DG C6 O6 doub N N 173 DG C6 N1 sing N N 174 DG N1 C2 sing N N 175 DG N1 H1 sing N N 176 DG C2 N2 sing N N 177 DG C2 N3 doub N N 178 DG N2 H21 sing N N 179 DG N2 H22 sing N N 180 DG N3 C4 sing N N 181 DT OP3 P sing N N 182 DT OP3 HOP3 sing N N 183 DT P OP1 doub N N 184 DT P OP2 sing N N 185 DT P "O5'" sing N N 186 DT OP2 HOP2 sing N N 187 DT "O5'" "C5'" sing N N 188 DT "C5'" "C4'" sing N N 189 DT "C5'" "H5'" sing N N 190 DT "C5'" "H5''" sing N N 191 DT "C4'" "O4'" sing N N 192 DT "C4'" "C3'" sing N N 193 DT "C4'" "H4'" sing N N 194 DT "O4'" "C1'" sing N N 195 DT "C3'" "O3'" sing N N 196 DT "C3'" "C2'" sing N N 197 DT "C3'" "H3'" sing N N 198 DT "O3'" "HO3'" sing N N 199 DT "C2'" "C1'" sing N N 200 DT "C2'" "H2'" sing N N 201 DT "C2'" "H2''" sing N N 202 DT "C1'" N1 sing N N 203 DT "C1'" "H1'" sing N N 204 DT N1 C2 sing N N 205 DT N1 C6 sing N N 206 DT C2 O2 doub N N 207 DT C2 N3 sing N N 208 DT N3 C4 sing N N 209 DT N3 H3 sing N N 210 DT C4 O4 doub N N 211 DT C4 C5 sing N N 212 DT C5 C7 sing N N 213 DT C5 C6 doub N N 214 DT C7 H71 sing N N 215 DT C7 H72 sing N N 216 DT C7 H73 sing N N 217 DT C6 H6 sing N N 218 GLN N CA sing N N 219 GLN N H sing N N 220 GLN N H2 sing N N 221 GLN CA C sing N N 222 GLN CA CB sing N N 223 GLN CA HA sing N N 224 GLN C O doub N N 225 GLN C OXT sing N N 226 GLN CB CG sing N N 227 GLN CB HB2 sing N N 228 GLN CB HB3 sing N N 229 GLN CG CD sing N N 230 GLN CG HG2 sing N N 231 GLN CG HG3 sing N N 232 GLN CD OE1 doub N N 233 GLN CD NE2 sing N N 234 GLN NE2 HE21 sing N N 235 GLN NE2 HE22 sing N N 236 GLN OXT HXT sing N N 237 GLU N CA sing N N 238 GLU N H sing N N 239 GLU N H2 sing N N 240 GLU CA C sing N N 241 GLU CA CB sing N N 242 GLU CA HA sing N N 243 GLU C O doub N N 244 GLU C OXT sing N N 245 GLU CB CG sing N N 246 GLU CB HB2 sing N N 247 GLU CB HB3 sing N N 248 GLU CG CD sing N N 249 GLU CG HG2 sing N N 250 GLU CG HG3 sing N N 251 GLU CD OE1 doub N N 252 GLU CD OE2 sing N N 253 GLU OE2 HE2 sing N N 254 GLU OXT HXT sing N N 255 GLY N CA sing N N 256 GLY N H sing N N 257 GLY N H2 sing N N 258 GLY CA C sing N N 259 GLY CA HA2 sing N N 260 GLY CA HA3 sing N N 261 GLY C O doub N N 262 GLY C OXT sing N N 263 GLY OXT HXT sing N N 264 HIS N CA sing N N 265 HIS N H sing N N 266 HIS N H2 sing N N 267 HIS CA C sing N N 268 HIS CA CB sing N N 269 HIS CA HA sing N N 270 HIS C O doub N N 271 HIS C OXT sing N N 272 HIS CB CG sing N N 273 HIS CB HB2 sing N N 274 HIS CB HB3 sing N N 275 HIS CG ND1 sing Y N 276 HIS CG CD2 doub Y N 277 HIS ND1 CE1 doub Y N 278 HIS ND1 HD1 sing N N 279 HIS CD2 NE2 sing Y N 280 HIS CD2 HD2 sing N N 281 HIS CE1 NE2 sing Y N 282 HIS CE1 HE1 sing N N 283 HIS NE2 HE2 sing N N 284 HIS OXT HXT sing N N 285 HOH O H1 sing N N 286 HOH O H2 sing N N 287 ILE N CA sing N N 288 ILE N H sing N N 289 ILE N H2 sing N N 290 ILE CA C sing N N 291 ILE CA CB sing N N 292 ILE CA HA sing N N 293 ILE C O doub N N 294 ILE C OXT sing N N 295 ILE CB CG1 sing N N 296 ILE CB CG2 sing N N 297 ILE CB HB sing N N 298 ILE CG1 CD1 sing N N 299 ILE CG1 HG12 sing N N 300 ILE CG1 HG13 sing N N 301 ILE CG2 HG21 sing N N 302 ILE CG2 HG22 sing N N 303 ILE CG2 HG23 sing N N 304 ILE CD1 HD11 sing N N 305 ILE CD1 HD12 sing N N 306 ILE CD1 HD13 sing N N 307 ILE OXT HXT sing N N 308 LEU N CA sing N N 309 LEU N H sing N N 310 LEU N H2 sing N N 311 LEU CA C sing N N 312 LEU CA CB sing N N 313 LEU CA HA sing N N 314 LEU C O doub N N 315 LEU C OXT sing N N 316 LEU CB CG sing N N 317 LEU CB HB2 sing N N 318 LEU CB HB3 sing N N 319 LEU CG CD1 sing N N 320 LEU CG CD2 sing N N 321 LEU CG HG sing N N 322 LEU CD1 HD11 sing N N 323 LEU CD1 HD12 sing N N 324 LEU CD1 HD13 sing N N 325 LEU CD2 HD21 sing N N 326 LEU CD2 HD22 sing N N 327 LEU CD2 HD23 sing N N 328 LEU OXT HXT sing N N 329 LYS N CA sing N N 330 LYS N H sing N N 331 LYS N H2 sing N N 332 LYS CA C sing N N 333 LYS CA CB sing N N 334 LYS CA HA sing N N 335 LYS C O doub N N 336 LYS C OXT sing N N 337 LYS CB CG sing N N 338 LYS CB HB2 sing N N 339 LYS CB HB3 sing N N 340 LYS CG CD sing N N 341 LYS CG HG2 sing N N 342 LYS CG HG3 sing N N 343 LYS CD CE sing N N 344 LYS CD HD2 sing N N 345 LYS CD HD3 sing N N 346 LYS CE NZ sing N N 347 LYS CE HE2 sing N N 348 LYS CE HE3 sing N N 349 LYS NZ HZ1 sing N N 350 LYS NZ HZ2 sing N N 351 LYS NZ HZ3 sing N N 352 LYS OXT HXT sing N N 353 PHE N CA sing N N 354 PHE N H sing N N 355 PHE N H2 sing N N 356 PHE CA C sing N N 357 PHE CA CB sing N N 358 PHE CA HA sing N N 359 PHE C O doub N N 360 PHE C OXT sing N N 361 PHE CB CG sing N N 362 PHE CB HB2 sing N N 363 PHE CB HB3 sing N N 364 PHE CG CD1 doub Y N 365 PHE CG CD2 sing Y N 366 PHE CD1 CE1 sing Y N 367 PHE CD1 HD1 sing N N 368 PHE CD2 CE2 doub Y N 369 PHE CD2 HD2 sing N N 370 PHE CE1 CZ doub Y N 371 PHE CE1 HE1 sing N N 372 PHE CE2 CZ sing Y N 373 PHE CE2 HE2 sing N N 374 PHE CZ HZ sing N N 375 PHE OXT HXT sing N N 376 PRO N CA sing N N 377 PRO N CD sing N N 378 PRO N H sing N N 379 PRO CA C sing N N 380 PRO CA CB sing N N 381 PRO CA HA sing N N 382 PRO C O doub N N 383 PRO C OXT sing N N 384 PRO CB CG sing N N 385 PRO CB HB2 sing N N 386 PRO CB HB3 sing N N 387 PRO CG CD sing N N 388 PRO CG HG2 sing N N 389 PRO CG HG3 sing N N 390 PRO CD HD2 sing N N 391 PRO CD HD3 sing N N 392 PRO OXT HXT sing N N 393 SER N CA sing N N 394 SER N H sing N N 395 SER N H2 sing N N 396 SER CA C sing N N 397 SER CA CB sing N N 398 SER CA HA sing N N 399 SER C O doub N N 400 SER C OXT sing N N 401 SER CB OG sing N N 402 SER CB HB2 sing N N 403 SER CB HB3 sing N N 404 SER OG HG sing N N 405 SER OXT HXT sing N N 406 THR N CA sing N N 407 THR N H sing N N 408 THR N H2 sing N N 409 THR CA C sing N N 410 THR CA CB sing N N 411 THR CA HA sing N N 412 THR C O doub N N 413 THR C OXT sing N N 414 THR CB OG1 sing N N 415 THR CB CG2 sing N N 416 THR CB HB sing N N 417 THR OG1 HG1 sing N N 418 THR CG2 HG21 sing N N 419 THR CG2 HG22 sing N N 420 THR CG2 HG23 sing N N 421 THR OXT HXT sing N N 422 TYR N CA sing N N 423 TYR N H sing N N 424 TYR N H2 sing N N 425 TYR CA C sing N N 426 TYR CA CB sing N N 427 TYR CA HA sing N N 428 TYR C O doub N N 429 TYR C OXT sing N N 430 TYR CB CG sing N N 431 TYR CB HB2 sing N N 432 TYR CB HB3 sing N N 433 TYR CG CD1 doub Y N 434 TYR CG CD2 sing Y N 435 TYR CD1 CE1 sing Y N 436 TYR CD1 HD1 sing N N 437 TYR CD2 CE2 doub Y N 438 TYR CD2 HD2 sing N N 439 TYR CE1 CZ doub Y N 440 TYR CE1 HE1 sing N N 441 TYR CE2 CZ sing Y N 442 TYR CE2 HE2 sing N N 443 TYR CZ OH sing N N 444 TYR OH HH sing N N 445 TYR OXT HXT sing N N 446 VAL N CA sing N N 447 VAL N H sing N N 448 VAL N H2 sing N N 449 VAL CA C sing N N 450 VAL CA CB sing N N 451 VAL CA HA sing N N 452 VAL C O doub N N 453 VAL C OXT sing N N 454 VAL CB CG1 sing N N 455 VAL CB CG2 sing N N 456 VAL CB HB sing N N 457 VAL CG1 HG11 sing N N 458 VAL CG1 HG12 sing N N 459 VAL CG1 HG13 sing N N 460 VAL CG2 HG21 sing N N 461 VAL CG2 HG22 sing N N 462 VAL CG2 HG23 sing N N 463 VAL OXT HXT sing N N 464 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2FLD 'double helix' 2FLD 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 B DC 24 1_555 -0.384 -0.272 -0.612 -16.798 -2.406 3.096 1 C_DG501:DC574_D C 501 ? D 574 ? 19 1 1 A DC 2 1_555 B DG 23 1_555 0.301 -0.164 -0.083 -4.512 1.091 -4.045 2 C_DC502:DG573_D C 502 ? D 573 ? 19 1 1 A DA 3 1_555 B DT 22 1_555 0.470 -0.425 0.225 17.138 6.685 0.868 3 C_DA503:DT572_D C 503 ? D 572 ? 20 1 1 A DG 4 1_555 B DC 21 1_555 0.005 0.020 0.132 12.384 -12.427 -4.219 4 C_DG504:DC571_D C 504 ? D 571 ? 19 1 1 A DA 5 1_555 B DT 20 1_555 -0.009 -0.016 0.713 14.181 -7.859 3.972 5 C_DA505:DT570_D C 505 ? D 570 ? 20 1 1 A DA 6 1_555 B DT 19 1_555 0.021 -0.081 0.208 9.955 -15.982 3.043 6 C_DA506:DT569_D C 506 ? D 569 ? 20 1 1 A DG 7 1_555 B DC 18 1_555 -0.327 -0.248 -0.354 -14.683 -14.283 1.656 7 C_DG507:DC568_D C 507 ? D 568 ? 19 1 1 A DG 8 1_555 B DC 17 1_555 0.074 -0.004 0.329 -12.030 -11.704 0.452 8 C_DG508:DC567_D C 508 ? D 567 ? 19 1 1 A DT 9 1_555 B DA 16 1_555 -0.338 0.005 0.176 -5.220 -2.706 -0.888 9 C_DT509:DA566_D C 509 ? D 566 ? 20 1 1 A DC 10 1_555 B DG 15 1_555 0.041 0.001 0.564 -0.851 -13.918 -4.954 10 C_DC510:DG565_D C 510 ? D 565 ? 19 1 1 A DG 11 1_555 B DC 14 1_555 0.445 -0.076 0.799 10.273 -20.430 -0.157 11 C_DG511:DC564_D C 511 ? D 564 ? 19 1 1 A DT 12 1_555 B DA 13 1_555 -0.164 -0.290 0.655 0.670 -20.617 1.015 12 C_DT512:DA563_D C 512 ? D 563 ? 20 1 1 A DG 13 1_555 B DC 12 1_555 -0.158 -0.262 0.009 -9.032 -26.347 2.469 13 C_DG513:DC562_D C 513 ? D 562 ? 19 1 1 A DA 14 1_555 B DT 11 1_555 0.256 -0.290 0.092 -10.969 -20.997 -2.207 14 C_DA514:DT561_D C 514 ? D 561 ? 20 1 1 A DG 15 1_555 B DC 10 1_555 0.222 0.007 0.368 1.391 -17.127 -2.062 15 C_DG515:DC560_D C 515 ? D 560 ? 19 1 1 A DA 16 1_555 B DT 9 1_555 -0.116 0.010 -0.196 2.645 -9.691 -0.977 16 C_DA516:DT559_D C 516 ? D 559 ? 20 1 1 A DC 17 1_555 B DG 8 1_555 -0.222 0.101 0.018 16.350 -12.380 -0.013 17 C_DC517:DG558_D C 517 ? D 558 ? 19 1 1 A DC 18 1_555 B DG 7 1_555 0.593 -0.412 -0.411 15.271 -9.323 -0.131 18 C_DC518:DG557_D C 518 ? D 557 ? 19 1 1 A DG 19 1_555 B DC 6 1_555 -0.411 -0.431 -0.038 -4.018 -12.935 0.949 19 C_DG519:DC556_D C 519 ? D 556 ? 19 1 1 A DT 20 1_555 B DA 5 1_555 -0.106 0.175 0.506 -13.080 -9.894 0.347 20 C_DT520:DA555_D C 520 ? D 555 ? 20 1 1 A DT 21 1_555 B DA 4 1_555 0.200 0.055 0.043 -3.854 -15.334 3.692 21 C_DT521:DA554_D C 521 ? D 554 ? 20 1 1 A DC 22 1_555 B DG 3 1_555 0.543 -0.136 0.186 -9.255 -10.989 -0.964 22 C_DC522:DG553_D C 522 ? D 553 ? 19 1 1 A DC 23 1_555 B DG 2 1_555 0.237 -0.125 0.296 -12.185 2.338 -1.545 23 C_DC523:DG552_D C 523 ? D 552 ? 19 1 1 A DG 24 1_555 B DC 1 1_555 -0.431 -0.084 -0.236 -3.775 -16.352 5.653 24 C_DG524:DC551_D C 524 ? D 551 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 B DC 24 1_555 A DC 2 1_555 B DG 23 1_555 -0.357 0.098 3.059 -5.348 7.484 29.331 -1.211 -0.324 3.009 14.342 10.248 30.710 1 CC_DG501DC502:DG573DC574_DD C 501 ? D 574 ? C 502 ? D 573 ? 1 A DC 2 1_555 B DG 23 1_555 A DA 3 1_555 B DT 22 1_555 0.633 -0.655 2.894 -1.270 2.915 27.375 -1.996 -1.599 2.779 6.133 2.673 27.555 2 CC_DC502DA503:DT572DG573_DD C 502 ? D 573 ? C 503 ? D 572 ? 1 A DA 3 1_555 B DT 22 1_555 A DG 4 1_555 B DC 21 1_555 -0.532 -0.455 3.598 0.902 -2.291 34.407 -0.376 1.052 3.605 -3.867 -1.522 34.493 3 CC_DA503DG504:DC571DT572_DD C 503 ? D 572 ? C 504 ? D 571 ? 1 A DG 4 1_555 B DC 21 1_555 A DA 5 1_555 B DT 20 1_555 0.517 -0.508 3.064 -4.523 -9.608 42.336 0.192 -1.109 3.036 -13.059 6.147 43.588 4 CC_DG504DA505:DT570DC571_DD C 504 ? D 571 ? C 505 ? D 570 ? 1 A DA 5 1_555 B DT 20 1_555 A DA 6 1_555 B DT 19 1_555 0.166 -0.823 3.400 4.443 -0.979 31.044 -1.329 0.568 3.414 -1.817 -8.245 31.368 5 CC_DA505DA506:DT569DT570_DD C 505 ? D 570 ? C 506 ? D 569 ? 1 A DA 6 1_555 B DT 19 1_555 A DG 7 1_555 B DC 18 1_555 -0.158 -1.203 3.807 0.072 7.962 35.660 -3.159 0.263 3.467 12.805 -0.115 36.510 6 CC_DA506DG507:DC568DT569_DD C 506 ? D 569 ? C 507 ? D 568 ? 1 A DG 7 1_555 B DC 18 1_555 A DG 8 1_555 B DC 17 1_555 0.124 -0.546 3.258 -6.281 5.150 36.074 -1.545 -1.028 3.089 8.189 9.987 36.948 7 CC_DG507DG508:DC567DC568_DD C 507 ? D 568 ? C 508 ? D 567 ? 1 A DG 8 1_555 B DC 17 1_555 A DT 9 1_555 B DA 16 1_555 -0.955 -0.928 3.175 1.382 1.827 21.723 -3.127 3.033 3.021 4.830 -3.653 21.842 8 CC_DG508DT509:DA566DC567_DD C 508 ? D 567 ? C 509 ? D 566 ? 1 A DT 9 1_555 B DA 16 1_555 A DC 10 1_555 B DG 15 1_555 -1.483 1.116 3.490 -7.836 -3.002 38.379 2.054 1.181 3.618 -4.501 11.749 39.251 9 CC_DT509DC510:DG565DA566_DD C 509 ? D 566 ? C 510 ? D 565 ? 1 A DC 10 1_555 B DG 15 1_555 A DG 11 1_555 B DC 14 1_555 0.209 0.531 3.253 -5.097 -0.109 38.147 0.820 -0.944 3.199 -0.165 7.757 38.474 10 CC_DC510DG511:DC564DG565_DD C 510 ? D 565 ? C 511 ? D 564 ? 1 A DG 11 1_555 B DC 14 1_555 A DT 12 1_555 B DA 13 1_555 0.028 -0.796 3.576 0.245 -8.102 22.876 1.017 0.022 3.639 -19.651 -0.593 24.252 11 CC_DG511DT512:DA563DC564_DD C 511 ? D 564 ? C 512 ? D 563 ? 1 A DT 12 1_555 B DA 13 1_555 A DG 13 1_555 B DC 12 1_555 -0.025 2.156 4.134 5.399 -15.202 56.392 3.153 0.361 3.483 -15.734 -5.588 58.472 12 CC_DT512DG513:DC562DA563_DD C 512 ? D 563 ? C 513 ? D 562 ? 1 A DG 13 1_555 B DC 12 1_555 A DA 14 1_555 B DT 11 1_555 -0.319 0.009 3.338 -2.555 -4.453 28.979 0.995 0.068 3.314 -8.812 5.056 29.420 13 CC_DG513DA514:DT561DC562_DD C 513 ? D 562 ? C 514 ? D 561 ? 1 A DA 14 1_555 B DT 11 1_555 A DG 15 1_555 B DC 10 1_555 -0.163 0.437 3.196 1.226 -1.966 35.821 0.982 0.435 3.161 -3.193 -1.990 35.893 14 CC_DA514DG515:DC560DT561_DD C 514 ? D 561 ? C 515 ? D 560 ? 1 A DG 15 1_555 B DC 10 1_555 A DA 16 1_555 B DT 9 1_555 1.427 1.055 3.482 9.662 -1.315 35.463 1.875 -0.790 3.692 -2.111 -15.504 36.738 15 CC_DG515DA516:DT559DC560_DD C 515 ? D 560 ? C 516 ? D 559 ? 1 A DA 16 1_555 B DT 9 1_555 A DC 17 1_555 B DG 8 1_555 1.162 -0.728 2.939 -1.757 3.141 22.356 -2.846 -3.515 2.714 8.034 4.493 22.641 16 CC_DA516DC517:DG558DT559_DD C 516 ? D 559 ? C 517 ? D 558 ? 1 A DC 17 1_555 B DG 8 1_555 A DC 18 1_555 B DG 7 1_555 -0.407 -0.438 3.448 5.897 4.812 37.140 -1.314 1.412 3.268 7.459 -9.140 37.885 17 CC_DC517DC518:DG557DG558_DD C 517 ? D 558 ? C 518 ? D 557 ? 1 A DC 18 1_555 B DG 7 1_555 A DG 19 1_555 B DC 6 1_555 -0.142 -1.852 3.602 -3.664 14.741 27.848 -6.042 -0.398 2.350 28.134 6.994 31.649 18 CC_DC518DG519:DC556DG557_DD C 518 ? D 557 ? C 519 ? D 556 ? 1 A DG 19 1_555 B DC 6 1_555 A DT 20 1_555 B DA 5 1_555 -0.413 -0.853 3.489 -4.197 -3.546 35.272 -0.834 0.013 3.579 -5.808 6.875 35.684 19 CC_DG519DT520:DA555DC556_DD C 519 ? D 556 ? C 520 ? D 555 ? 1 A DT 20 1_555 B DA 5 1_555 A DT 21 1_555 B DA 4 1_555 -0.293 -0.599 2.914 2.147 -5.471 36.196 -0.276 0.731 2.949 -8.734 -3.427 36.654 20 CC_DT520DT521:DA554DA555_DD C 520 ? D 555 ? C 521 ? D 554 ? 1 A DT 21 1_555 B DA 4 1_555 A DC 22 1_555 B DG 3 1_555 -0.181 -0.436 3.443 -4.549 -3.301 42.462 -0.247 -0.234 3.466 -4.534 6.248 42.815 21 CC_DT521DC522:DG553DA554_DD C 521 ? D 554 ? C 522 ? D 553 ? 1 A DC 22 1_555 B DG 3 1_555 A DC 23 1_555 B DG 2 1_555 -0.646 -0.714 3.434 -1.651 1.701 24.402 -2.233 0.984 3.413 4.013 3.895 24.515 22 CC_DC522DC523:DG552DG553_DD C 522 ? D 553 ? C 523 ? D 552 ? 1 A DC 23 1_555 B DG 2 1_555 A DG 24 1_555 B DC 1 1_555 -0.399 1.561 3.222 0.105 7.811 35.077 1.374 0.662 3.477 12.765 -0.172 35.909 23 CC_DC523DG524:DC551DG552_DD C 523 ? D 552 ? C 524 ? D 551 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'SODIUM ION' NA 5 'CALCIUM ION' CA 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1M5X _pdbx_initial_refinement_model.details 'PDB ENTRY 1M5X, MUTATED RESIDUES EXCLUDED' #