HEADER DNA BINDING PROTEIN 09-FEB-06 2FZL TITLE STRUCTURE OF C-TERMINAL DOMAIN OF ARCHAEOGLOBUS FULGIDUS XPB COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA REPAIR PROTEIN RAD25, XPB; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 237-434; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS; SOURCE 3 ORGANISM_TAXID: 2234; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET-28B KEYWDS XPB, NUCLEOTIDE EXCISION REPAIR, DNA REPAIR, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR L.FAN,A.S.ARVAI,J.A.TAINER REVDAT 4 30-AUG-23 2FZL 1 REMARK SEQADV REVDAT 3 18-OCT-17 2FZL 1 REMARK REVDAT 2 24-FEB-09 2FZL 1 VERSN REVDAT 1 18-APR-06 2FZL 0 JRNL AUTH L.FAN,A.S.ARVAI,P.K.COOPER,S.IWAI,F.HANAOKA,J.A.TAINER JRNL TITL CONSERVED XPB CORE STRUCTURE AND MOTIFS FOR DNA UNWINDING: JRNL TITL 2 IMPLICATIONS FOR PATHWAY SELECTION OF TRANSCRIPTION OR JRNL TITL 3 EXCISION REPAIR JRNL REF MOL.CELL V. 22 27 2006 JRNL REFN ISSN 1097-2765 JRNL PMID 16600867 JRNL DOI 10.1016/J.MOLCEL.2006.02.017 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 77348.844 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 92.4 REMARK 3 NUMBER OF REFLECTIONS : 9267 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.249 REMARK 3 FREE R VALUE : 0.291 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.300 REMARK 3 FREE R VALUE TEST SET COUNT : 490 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.013 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.08 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 86.60 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1327 REMARK 3 BIN R VALUE (WORKING SET) : 0.3600 REMARK 3 BIN FREE R VALUE : 0.4350 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.50 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 77 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.050 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1638 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 23 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 73.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.39 REMARK 3 ESD FROM SIGMAA (A) : 0.52 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.53 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.75 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.710 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.500 ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.750 ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : 2.020 ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.500 ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.36 REMARK 3 BSOL : 55.35 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : IOH.PAR REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : IOH.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2FZL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-FEB-06. REMARK 100 THE DEPOSITION ID IS D_1000036501. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-OCT-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 12.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.115869 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10024 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 25.50 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 55.1800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 25.60 REMARK 200 R MERGE FOR SHELL (I) : 0.62900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.060 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 2FWR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULPHATE, ISOPROPANOL, CAPS, REMARK 280 PH 9.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 303K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+3/4,X+1/4,-Z+1/4 REMARK 290 14555 -Y+3/4,-X+3/4,-Z+3/4 REMARK 290 15555 Y+1/4,-X+1/4,Z+3/4 REMARK 290 16555 -Y+1/4,X+3/4,Z+1/4 REMARK 290 17555 X+3/4,Z+1/4,-Y+1/4 REMARK 290 18555 -X+1/4,Z+3/4,Y+1/4 REMARK 290 19555 -X+3/4,-Z+3/4,-Y+3/4 REMARK 290 20555 X+1/4,-Z+1/4,Y+3/4 REMARK 290 21555 Z+3/4,Y+1/4,-X+1/4 REMARK 290 22555 Z+1/4,-Y+1/4,X+3/4 REMARK 290 23555 -Z+1/4,Y+3/4,X+1/4 REMARK 290 24555 -Z+3/4,-Y+3/4,-X+3/4 REMARK 290 25555 X+1/2,Y+1/2,Z+1/2 REMARK 290 26555 -X,-Y+1/2,Z REMARK 290 27555 -X+1/2,Y,-Z REMARK 290 28555 X,-Y,-Z+1/2 REMARK 290 29555 Z+1/2,X+1/2,Y+1/2 REMARK 290 30555 Z,-X,-Y+1/2 REMARK 290 31555 -Z,-X+1/2,Y REMARK 290 32555 -Z+1/2,X,-Y REMARK 290 33555 Y+1/2,Z+1/2,X+1/2 REMARK 290 34555 -Y+1/2,Z,-X REMARK 290 35555 Y,-Z,-X+1/2 REMARK 290 36555 -Y,-Z+1/2,X REMARK 290 37555 Y+1/4,X+3/4,-Z+3/4 REMARK 290 38555 -Y+1/4,-X+1/4,-Z+1/4 REMARK 290 39555 Y+3/4,-X+3/4,Z+1/4 REMARK 290 40555 -Y+3/4,X+1/4,Z+3/4 REMARK 290 41555 X+1/4,Z+3/4,-Y+3/4 REMARK 290 42555 -X+3/4,Z+1/4,Y+3/4 REMARK 290 43555 -X+1/4,-Z+1/4,-Y+1/4 REMARK 290 44555 X+3/4,-Z+3/4,Y+1/4 REMARK 290 45555 Z+1/4,Y+3/4,-X+3/4 REMARK 290 46555 Z+3/4,-Y+3/4,X+1/4 REMARK 290 47555 -Z+3/4,Y+1/4,X+3/4 REMARK 290 48555 -Z+1/4,-Y+1/4,-X+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 86.42950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 86.42950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 86.42950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 86.42950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 86.42950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 86.42950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 86.42950 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 86.42950 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 86.42950 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 86.42950 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 86.42950 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 86.42950 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 86.42950 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 86.42950 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 86.42950 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 86.42950 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 86.42950 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 86.42950 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 129.64425 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 43.21475 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 43.21475 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 129.64425 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 129.64425 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 129.64425 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 43.21475 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 43.21475 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 129.64425 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 43.21475 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 129.64425 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 43.21475 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 129.64425 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 43.21475 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 43.21475 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 43.21475 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 129.64425 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 43.21475 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 129.64425 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 129.64425 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 129.64425 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 43.21475 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 43.21475 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 129.64425 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 129.64425 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 43.21475 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 43.21475 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 43.21475 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 43.21475 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 129.64425 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 43.21475 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 129.64425 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 43.21475 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 129.64425 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 129.64425 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 129.64425 REMARK 290 SMTRY1 25 1.000000 0.000000 0.000000 86.42950 REMARK 290 SMTRY2 25 0.000000 1.000000 0.000000 86.42950 REMARK 290 SMTRY3 25 0.000000 0.000000 1.000000 86.42950 REMARK 290 SMTRY1 26 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 26 0.000000 -1.000000 0.000000 86.42950 REMARK 290 SMTRY3 26 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 27 -1.000000 0.000000 0.000000 86.42950 REMARK 290 SMTRY2 27 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 27 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 28 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 28 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 28 0.000000 0.000000 -1.000000 86.42950 REMARK 290 SMTRY1 29 0.000000 0.000000 1.000000 86.42950 REMARK 290 SMTRY2 29 1.000000 0.000000 0.000000 86.42950 REMARK 290 SMTRY3 29 0.000000 1.000000 0.000000 86.42950 REMARK 290 SMTRY1 30 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 30 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 30 0.000000 -1.000000 0.000000 86.42950 REMARK 290 SMTRY1 31 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 31 -1.000000 0.000000 0.000000 86.42950 REMARK 290 SMTRY3 31 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 32 0.000000 0.000000 -1.000000 86.42950 REMARK 290 SMTRY2 32 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 32 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 33 0.000000 1.000000 0.000000 86.42950 REMARK 290 SMTRY2 33 0.000000 0.000000 1.000000 86.42950 REMARK 290 SMTRY3 33 1.000000 0.000000 0.000000 86.42950 REMARK 290 SMTRY1 34 0.000000 -1.000000 0.000000 86.42950 REMARK 290 SMTRY2 34 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 34 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 35 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 35 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 35 -1.000000 0.000000 0.000000 86.42950 REMARK 290 SMTRY1 36 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 36 0.000000 0.000000 -1.000000 86.42950 REMARK 290 SMTRY3 36 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 37 0.000000 1.000000 0.000000 43.21475 REMARK 290 SMTRY2 37 1.000000 0.000000 0.000000 129.64425 REMARK 290 SMTRY3 37 0.000000 0.000000 -1.000000 129.64425 REMARK 290 SMTRY1 38 0.000000 -1.000000 0.000000 43.21475 REMARK 290 SMTRY2 38 -1.000000 0.000000 0.000000 43.21475 REMARK 290 SMTRY3 38 0.000000 0.000000 -1.000000 43.21475 REMARK 290 SMTRY1 39 0.000000 1.000000 0.000000 129.64425 REMARK 290 SMTRY2 39 -1.000000 0.000000 0.000000 129.64425 REMARK 290 SMTRY3 39 0.000000 0.000000 1.000000 43.21475 REMARK 290 SMTRY1 40 0.000000 -1.000000 0.000000 129.64425 REMARK 290 SMTRY2 40 1.000000 0.000000 0.000000 43.21475 REMARK 290 SMTRY3 40 0.000000 0.000000 1.000000 129.64425 REMARK 290 SMTRY1 41 1.000000 0.000000 0.000000 43.21475 REMARK 290 SMTRY2 41 0.000000 0.000000 1.000000 129.64425 REMARK 290 SMTRY3 41 0.000000 -1.000000 0.000000 129.64425 REMARK 290 SMTRY1 42 -1.000000 0.000000 0.000000 129.64425 REMARK 290 SMTRY2 42 0.000000 0.000000 1.000000 43.21475 REMARK 290 SMTRY3 42 0.000000 1.000000 0.000000 129.64425 REMARK 290 SMTRY1 43 -1.000000 0.000000 0.000000 43.21475 REMARK 290 SMTRY2 43 0.000000 0.000000 -1.000000 43.21475 REMARK 290 SMTRY3 43 0.000000 -1.000000 0.000000 43.21475 REMARK 290 SMTRY1 44 1.000000 0.000000 0.000000 129.64425 REMARK 290 SMTRY2 44 0.000000 0.000000 -1.000000 129.64425 REMARK 290 SMTRY3 44 0.000000 1.000000 0.000000 43.21475 REMARK 290 SMTRY1 45 0.000000 0.000000 1.000000 43.21475 REMARK 290 SMTRY2 45 0.000000 1.000000 0.000000 129.64425 REMARK 290 SMTRY3 45 -1.000000 0.000000 0.000000 129.64425 REMARK 290 SMTRY1 46 0.000000 0.000000 1.000000 129.64425 REMARK 290 SMTRY2 46 0.000000 -1.000000 0.000000 129.64425 REMARK 290 SMTRY3 46 1.000000 0.000000 0.000000 43.21475 REMARK 290 SMTRY1 47 0.000000 0.000000 -1.000000 129.64425 REMARK 290 SMTRY2 47 0.000000 1.000000 0.000000 43.21475 REMARK 290 SMTRY3 47 1.000000 0.000000 0.000000 129.64425 REMARK 290 SMTRY1 48 0.000000 0.000000 -1.000000 43.21475 REMARK 290 SMTRY2 48 0.000000 -1.000000 0.000000 43.21475 REMARK 290 SMTRY3 48 -1.000000 0.000000 0.000000 43.21475 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 236 REMARK 465 GLY A 237 REMARK 465 SER A 238 REMARK 465 SER A 239 REMARK 465 HIS A 240 REMARK 465 HIS A 241 REMARK 465 HIS A 242 REMARK 465 HIS A 243 REMARK 465 HIS A 244 REMARK 465 HIS A 245 REMARK 465 SER A 246 REMARK 465 SER A 247 REMARK 465 GLY A 248 REMARK 465 LEU A 249 REMARK 465 VAL A 250 REMARK 465 PRO A 251 REMARK 465 ARG A 252 REMARK 465 GLY A 253 REMARK 465 SER A 254 REMARK 465 HIS A 255 REMARK 465 MET A 256 REMARK 465 LYS A 257 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 260 -5.17 -141.05 REMARK 500 LYS A 261 67.38 -160.24 REMARK 500 GLU A 273 -71.54 -58.38 REMARK 500 GLU A 301 -33.18 53.05 REMARK 500 LEU A 370 62.48 -61.22 REMARK 500 THR A 375 -169.41 -123.47 REMARK 500 HIS A 376 54.24 -90.43 REMARK 500 ARG A 377 -99.73 -156.87 REMARK 500 THR A 378 -89.60 38.24 REMARK 500 SER A 379 -155.35 168.62 REMARK 500 ARG A 383 -71.21 -45.08 REMARK 500 ARG A 391 1.20 -67.14 REMARK 500 ARG A 394 -71.90 64.62 REMARK 500 VAL A 410 128.40 56.25 REMARK 500 SER A 439 170.52 -51.99 REMARK 500 LYS A 442 -44.97 76.48 REMARK 500 ALA A 445 148.56 -177.76 REMARK 500 ARG A 453 -108.86 -168.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPA A 6001 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2FWR RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF FULL-LENGTH ARCHAEOGLOBUS FULGIDUS XPB DBREF 2FZL A 257 454 UNP O29889 O29889_ARCFU 237 434 SEQADV 2FZL MET A 236 UNP O29889 INITIATING METHIONINE SEQADV 2FZL GLY A 237 UNP O29889 CLONING ARTIFACT SEQADV 2FZL SER A 238 UNP O29889 CLONING ARTIFACT SEQADV 2FZL SER A 239 UNP O29889 CLONING ARTIFACT SEQADV 2FZL HIS A 240 UNP O29889 EXPRESSION TAG SEQADV 2FZL HIS A 241 UNP O29889 EXPRESSION TAG SEQADV 2FZL HIS A 242 UNP O29889 EXPRESSION TAG SEQADV 2FZL HIS A 243 UNP O29889 EXPRESSION TAG SEQADV 2FZL HIS A 244 UNP O29889 EXPRESSION TAG SEQADV 2FZL HIS A 245 UNP O29889 EXPRESSION TAG SEQADV 2FZL SER A 246 UNP O29889 CLONING ARTIFACT SEQADV 2FZL SER A 247 UNP O29889 CLONING ARTIFACT SEQADV 2FZL GLY A 248 UNP O29889 CLONING ARTIFACT SEQADV 2FZL LEU A 249 UNP O29889 CLONING ARTIFACT SEQADV 2FZL VAL A 250 UNP O29889 CLONING ARTIFACT SEQADV 2FZL PRO A 251 UNP O29889 CLONING ARTIFACT SEQADV 2FZL ARG A 252 UNP O29889 CLONING ARTIFACT SEQADV 2FZL GLY A 253 UNP O29889 CLONING ARTIFACT SEQADV 2FZL SER A 254 UNP O29889 CLONING ARTIFACT SEQADV 2FZL HIS A 255 UNP O29889 CLONING ARTIFACT SEQADV 2FZL MET A 256 UNP O29889 CLONING ARTIFACT SEQRES 1 A 219 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 219 LEU VAL PRO ARG GLY SER HIS MET LYS HIS LEU ALA LYS SEQRES 3 A 219 TYR THR ILE LYS ARG ILE PHE VAL PRO LEU ALA GLU ASP SEQRES 4 A 219 GLU ARG VAL GLU TYR GLU LYS ARG GLU LYS VAL TYR LYS SEQRES 5 A 219 GLN PHE LEU ARG ALA ARG GLY ILE THR LEU ARG ARG ALA SEQRES 6 A 219 GLU ASP PHE ASN LYS ILE VAL MET ALA SER GLY TYR ASP SEQRES 7 A 219 GLU ARG ALA TYR GLU ALA LEU ARG ALA TRP GLU GLU ALA SEQRES 8 A 219 ARG ARG ILE ALA PHE ASN SER LYS ASN LYS ILE ARG LYS SEQRES 9 A 219 LEU ARG GLU ILE LEU GLU ARG HIS ARG LYS ASP LYS ILE SEQRES 10 A 219 ILE ILE PHE THR ARG HIS ASN GLU LEU VAL TYR ARG ILE SEQRES 11 A 219 SER LYS VAL PHE LEU ILE PRO ALA ILE THR HIS ARG THR SEQRES 12 A 219 SER ARG GLU GLU ARG GLU GLU ILE LEU GLU GLY PHE ARG SEQRES 13 A 219 THR GLY ARG PHE ARG ALA ILE VAL SER SER GLN VAL LEU SEQRES 14 A 219 ASP GLU GLY ILE ASP VAL PRO ASP ALA ASN VAL GLY VAL SEQRES 15 A 219 ILE MET SER GLY SER GLY SER ALA ARG GLU TYR ILE GLN SEQRES 16 A 219 ARG LEU GLY ARG ILE LEU ARG PRO SER LYS GLY LYS LYS SEQRES 17 A 219 GLU ALA VAL LEU TYR GLU LEU ILE SER ARG GLY HET IPA A6001 4 HETNAM IPA ISOPROPYL ALCOHOL HETSYN IPA 2-PROPANOL FORMUL 2 IPA C3 H8 O FORMUL 3 HOH *23(H2 O) HELIX 1 1 ALA A 272 ARG A 293 1 22 HELIX 2 2 THR A 296 ALA A 300 5 5 HELIX 3 3 GLU A 301 SER A 310 1 10 HELIX 4 4 ASP A 313 ASN A 332 1 20 HELIX 5 5 SER A 333 HIS A 347 1 15 HELIX 6 6 HIS A 358 PHE A 369 1 12 HELIX 7 7 ARG A 380 ARG A 391 1 12 HELIX 8 8 ALA A 425 LEU A 436 1 12 SHEET 1 A 6 LYS A 261 PRO A 270 0 SHEET 2 A 6 GLU A 444 ARG A 453 1 O LEU A 447 N LYS A 265 SHEET 3 A 6 VAL A 415 MET A 419 1 N GLY A 416 O TYR A 448 SHEET 4 A 6 ILE A 352 PHE A 355 1 N PHE A 355 O VAL A 417 SHEET 5 A 6 ALA A 397 SER A 400 1 O ILE A 398 N ILE A 354 SHEET 6 A 6 ALA A 373 ILE A 374 1 N ILE A 374 O VAL A 399 SITE 1 AC1 3 TYR A 279 TRP A 323 ARG A 327 CRYST1 172.859 172.859 172.859 90.00 90.00 90.00 I 41 3 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005790 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005790 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005790 0.00000