data_2GMD # _entry.id 2GMD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.328 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2GMD RCSB RCSB037292 WWPDB D_1000037292 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2gmc _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2GMD _pdbx_database_status.recvd_initial_deposition_date 2006-04-06 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Japelj, B.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'The Acyl Group as the Central Element of the Structural Organization of Antimicrobial Lipopeptide.' _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_volume 129 _citation.page_first 1022 _citation.page_last 1023 _citation.year 2007 _citation.journal_id_ASTM JACSAT _citation.country US _citation.journal_id_ISSN 0002-7863 _citation.journal_id_CSD 0004 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17263370 _citation.pdbx_database_id_DOI 10.1021/ja067419v # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Japelj, B.' 1 ? primary 'Zorko, M.' 2 ? primary 'Majerle, A.' 3 ? primary 'Pristovsek, P.' 4 ? primary 'Sanchez-Gomez, S.' 5 ? primary 'Tejada, G.M.' 6 ? primary 'Moriyon, I.' 7 ? primary 'Blondelle, S.E.' 8 ? primary 'Brandenburg, K.' 9 ? primary 'Andra, J.' 10 ? primary 'Lohner, K.' 11 ? primary 'Jerala, R.' 12 ? # _cell.entry_id 2GMD _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2GMD _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'LACTOFERRIN-BASED SYNTHETIC PEPTIDE C12-LF11' 1532.817 1 ? ? ? ? 2 non-polymer syn 'LAURIC ACID' 200.318 1 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'FQWQRNIRKVR(NH2)' _entity_poly.pdbx_seq_one_letter_code_can FQWQRNIRKVRX _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PHE n 1 2 GLN n 1 3 TRP n 1 4 GLN n 1 5 ARG n 1 6 ASN n 1 7 ILE n 1 8 ARG n 1 9 LYS n 1 10 VAL n 1 11 ARG n 1 12 NH2 n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 12 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 2GMD _struct_ref.pdbx_db_accession 2GMD _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2GMD _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 12 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 2GMD _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 12 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 12 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 DAO non-polymer . 'LAURIC ACID' ? 'C12 H24 O2' 200.318 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 '2D TOCSY' 1 2 1 '2D NOESY' 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 303 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 5.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.247 _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.3 mM C12-LF11, 227.1 mM d25-SDS (sodiumdodecylsulphate), 20 mM phosphate buffer Na, 7% D20, 93 % H20' _pdbx_nmr_sample_details.solvent_system '7% D20, 93 %H20' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model UNITY _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2GMD _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2GMD _pdbx_nmr_ensemble.conformers_calculated_total_number 20 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'all calculated structures submitted' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2GMD _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal 'structure solution' DYANA 1.5 'Guentert, P., Mumenthaler, C. & Wuethrich, K.' 1 refinement Discover ? ? 2 refinement DYANA 1.5 'Guentert, P., Mumenthaler, C. & Wuethrich, K.' 3 # _exptl.entry_id 2GMD _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 2GMD _struct.title 'Structure of C12-LF11 bound to the SDS micelles' _struct.pdbx_descriptor 'LACTOFERRIN-BASED SYNTHETIC PEPTIDE C12-LF11' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2GMD _struct_keywords.pdbx_keywords 'ANTIMICROBIAL PROTEIN' _struct_keywords.text 'ANTIMICROBIAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? A PHE 1 N ? ? ? 1_555 B DAO . C1 ? ? A PHE 1 A DAO 13 1_555 ? ? ? ? ? ? ? 1.728 ? covale2 covale both ? A ARG 11 C ? ? ? 1_555 A NH2 12 N ? ? A ARG 11 A NH2 12 1_555 ? ? ? ? ? ? ? 1.318 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 2 _struct_site.details 'BINDING SITE FOR RESIDUE DAO A 13' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 PHE A 1 ? PHE A 1 . ? 1_555 ? 2 AC1 2 TRP A 3 ? TRP A 3 . ? 1_555 ? # _database_PDB_matrix.entry_id 2GMD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2GMD _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PHE 1 1 1 PHE PHE A . n A 1 2 GLN 2 2 2 GLN GLN A . n A 1 3 TRP 3 3 3 TRP TRP A . n A 1 4 GLN 4 4 4 GLN GLN A . n A 1 5 ARG 5 5 5 ARG ARG A . n A 1 6 ASN 6 6 6 ASN ASN A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 VAL 10 10 10 VAL VAL A . n A 1 11 ARG 11 11 11 ARG ARG A . n A 1 12 NH2 12 12 12 NH2 NH2 A . n # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id DAO _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 13 _pdbx_nonpoly_scheme.auth_seq_num 13 _pdbx_nonpoly_scheme.pdb_mon_id DAO _pdbx_nonpoly_scheme.auth_mon_id DAO _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-02-13 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2020-06-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Source and taxonomy' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_entity_src_syn 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_ref 7 4 'Structure model' struct_ref_seq # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_pdbx_nmr_software.name' 2 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CD1 A TRP 3 ? ? NE1 A TRP 3 ? ? CE2 A TRP 3 ? ? 103.60 109.00 -5.40 0.90 N 2 1 NE A ARG 5 ? ? CZ A ARG 5 ? ? NH1 A ARG 5 ? ? 123.67 120.30 3.37 0.50 N 3 1 NE A ARG 8 ? ? CZ A ARG 8 ? ? NH1 A ARG 8 ? ? 123.68 120.30 3.38 0.50 N 4 1 NE A ARG 11 ? ? CZ A ARG 11 ? ? NH1 A ARG 11 ? ? 123.31 120.30 3.01 0.50 N 5 2 NE A ARG 5 ? ? CZ A ARG 5 ? ? NH1 A ARG 5 ? ? 123.67 120.30 3.37 0.50 N 6 2 NE A ARG 8 ? ? CZ A ARG 8 ? ? NH1 A ARG 8 ? ? 123.66 120.30 3.36 0.50 N 7 2 NE A ARG 11 ? ? CZ A ARG 11 ? ? NH1 A ARG 11 ? ? 124.01 120.30 3.71 0.50 N 8 3 NE A ARG 5 ? ? CZ A ARG 5 ? ? NH1 A ARG 5 ? ? 123.51 120.30 3.21 0.50 N 9 3 NE A ARG 8 ? ? CZ A ARG 8 ? ? NH1 A ARG 8 ? ? 123.69 120.30 3.39 0.50 N 10 3 NE A ARG 11 ? ? CZ A ARG 11 ? ? NH1 A ARG 11 ? ? 123.67 120.30 3.37 0.50 N 11 4 NE A ARG 5 ? ? CZ A ARG 5 ? ? NH1 A ARG 5 ? ? 123.76 120.30 3.46 0.50 N 12 4 NE A ARG 8 ? ? CZ A ARG 8 ? ? NH1 A ARG 8 ? ? 123.63 120.30 3.33 0.50 N 13 4 NE A ARG 11 ? ? CZ A ARG 11 ? ? NH1 A ARG 11 ? ? 123.43 120.30 3.13 0.50 N 14 5 NE A ARG 5 ? ? CZ A ARG 5 ? ? NH1 A ARG 5 ? ? 123.57 120.30 3.27 0.50 N 15 5 NE A ARG 8 ? ? CZ A ARG 8 ? ? NH1 A ARG 8 ? ? 123.67 120.30 3.37 0.50 N 16 5 NE A ARG 11 ? ? CZ A ARG 11 ? ? NH1 A ARG 11 ? ? 123.92 120.30 3.62 0.50 N 17 6 NE A ARG 5 ? ? CZ A ARG 5 ? ? NH1 A ARG 5 ? ? 123.61 120.30 3.31 0.50 N 18 6 NE A ARG 8 ? ? CZ A ARG 8 ? ? NH1 A ARG 8 ? ? 123.75 120.30 3.45 0.50 N 19 6 NE A ARG 11 ? ? CZ A ARG 11 ? ? NH1 A ARG 11 ? ? 123.62 120.30 3.32 0.50 N 20 7 NE A ARG 5 ? ? CZ A ARG 5 ? ? NH1 A ARG 5 ? ? 123.58 120.30 3.28 0.50 N 21 7 NE A ARG 8 ? ? CZ A ARG 8 ? ? NH1 A ARG 8 ? ? 123.59 120.30 3.29 0.50 N 22 7 NE A ARG 11 ? ? CZ A ARG 11 ? ? NH1 A ARG 11 ? ? 123.71 120.30 3.41 0.50 N 23 8 NE A ARG 5 ? ? CZ A ARG 5 ? ? NH1 A ARG 5 ? ? 123.65 120.30 3.35 0.50 N 24 8 NE A ARG 8 ? ? CZ A ARG 8 ? ? NH1 A ARG 8 ? ? 123.61 120.30 3.31 0.50 N 25 8 NE A ARG 11 ? ? CZ A ARG 11 ? ? NH1 A ARG 11 ? ? 123.90 120.30 3.60 0.50 N 26 9 CD1 A TRP 3 ? ? NE1 A TRP 3 ? ? CE2 A TRP 3 ? ? 103.40 109.00 -5.60 0.90 N 27 9 NE A ARG 5 ? ? CZ A ARG 5 ? ? NH1 A ARG 5 ? ? 123.67 120.30 3.37 0.50 N 28 9 NE A ARG 8 ? ? CZ A ARG 8 ? ? NH1 A ARG 8 ? ? 123.61 120.30 3.31 0.50 N 29 9 NE A ARG 11 ? ? CZ A ARG 11 ? ? NH1 A ARG 11 ? ? 123.57 120.30 3.27 0.50 N 30 10 NE A ARG 5 ? ? CZ A ARG 5 ? ? NH1 A ARG 5 ? ? 123.72 120.30 3.42 0.50 N 31 10 NE A ARG 8 ? ? CZ A ARG 8 ? ? NH1 A ARG 8 ? ? 123.62 120.30 3.32 0.50 N 32 10 NE A ARG 11 ? ? CZ A ARG 11 ? ? NH1 A ARG 11 ? ? 123.65 120.30 3.35 0.50 N 33 11 NE A ARG 5 ? ? CZ A ARG 5 ? ? NH1 A ARG 5 ? ? 123.60 120.30 3.30 0.50 N 34 11 NE A ARG 8 ? ? CZ A ARG 8 ? ? NH1 A ARG 8 ? ? 123.86 120.30 3.56 0.50 N 35 11 NE A ARG 11 ? ? CZ A ARG 11 ? ? NH1 A ARG 11 ? ? 124.03 120.30 3.73 0.50 N 36 12 NE A ARG 5 ? ? CZ A ARG 5 ? ? NH1 A ARG 5 ? ? 123.72 120.30 3.42 0.50 N 37 12 NE A ARG 8 ? ? CZ A ARG 8 ? ? NH1 A ARG 8 ? ? 124.11 120.30 3.81 0.50 N 38 12 NE A ARG 8 ? ? CZ A ARG 8 ? ? NH2 A ARG 8 ? ? 117.04 120.30 -3.26 0.50 N 39 12 NE A ARG 11 ? ? CZ A ARG 11 ? ? NH1 A ARG 11 ? ? 123.76 120.30 3.46 0.50 N 40 13 CD1 A TRP 3 ? ? NE1 A TRP 3 ? ? CE2 A TRP 3 ? ? 103.38 109.00 -5.62 0.90 N 41 13 NE A ARG 5 ? ? CZ A ARG 5 ? ? NH1 A ARG 5 ? ? 124.07 120.30 3.77 0.50 N 42 13 NE A ARG 8 ? ? CZ A ARG 8 ? ? NH1 A ARG 8 ? ? 123.82 120.30 3.52 0.50 N 43 13 NE A ARG 11 ? ? CZ A ARG 11 ? ? NH1 A ARG 11 ? ? 123.68 120.30 3.38 0.50 N 44 14 CB A TRP 3 ? ? CG A TRP 3 ? ? CD2 A TRP 3 ? ? 134.92 126.60 8.32 1.30 N 45 14 NE A ARG 5 ? ? CZ A ARG 5 ? ? NH1 A ARG 5 ? ? 123.54 120.30 3.24 0.50 N 46 14 NE A ARG 8 ? ? CZ A ARG 8 ? ? NH1 A ARG 8 ? ? 123.65 120.30 3.35 0.50 N 47 14 NE A ARG 11 ? ? CZ A ARG 11 ? ? NH1 A ARG 11 ? ? 123.65 120.30 3.35 0.50 N 48 15 NE A ARG 5 ? ? CZ A ARG 5 ? ? NH1 A ARG 5 ? ? 123.46 120.30 3.16 0.50 N 49 15 NE A ARG 8 ? ? CZ A ARG 8 ? ? NH1 A ARG 8 ? ? 123.60 120.30 3.30 0.50 N 50 15 NE A ARG 11 ? ? CZ A ARG 11 ? ? NH1 A ARG 11 ? ? 124.54 120.30 4.24 0.50 N 51 16 CD1 A TRP 3 ? ? NE1 A TRP 3 ? ? CE2 A TRP 3 ? ? 103.57 109.00 -5.43 0.90 N 52 16 NE A ARG 5 ? ? CZ A ARG 5 ? ? NH1 A ARG 5 ? ? 123.59 120.30 3.29 0.50 N 53 16 NE A ARG 8 ? ? CZ A ARG 8 ? ? NH1 A ARG 8 ? ? 123.68 120.30 3.38 0.50 N 54 16 NE A ARG 11 ? ? CZ A ARG 11 ? ? NH1 A ARG 11 ? ? 123.60 120.30 3.30 0.50 N 55 17 CD1 A TRP 3 ? ? NE1 A TRP 3 ? ? CE2 A TRP 3 ? ? 103.41 109.00 -5.59 0.90 N 56 17 NE A ARG 5 ? ? CZ A ARG 5 ? ? NH1 A ARG 5 ? ? 123.75 120.30 3.45 0.50 N 57 17 NE A ARG 8 ? ? CZ A ARG 8 ? ? NH1 A ARG 8 ? ? 123.63 120.30 3.33 0.50 N 58 17 NE A ARG 11 ? ? CZ A ARG 11 ? ? NH1 A ARG 11 ? ? 123.69 120.30 3.39 0.50 N 59 18 NE A ARG 5 ? ? CZ A ARG 5 ? ? NH1 A ARG 5 ? ? 123.71 120.30 3.41 0.50 N 60 18 NE A ARG 8 ? ? CZ A ARG 8 ? ? NH1 A ARG 8 ? ? 123.60 120.30 3.30 0.50 N 61 18 NE A ARG 11 ? ? CZ A ARG 11 ? ? NH1 A ARG 11 ? ? 123.63 120.30 3.33 0.50 N 62 19 NE A ARG 5 ? ? CZ A ARG 5 ? ? NH1 A ARG 5 ? ? 123.66 120.30 3.36 0.50 N 63 19 NE A ARG 8 ? ? CZ A ARG 8 ? ? NH1 A ARG 8 ? ? 123.73 120.30 3.43 0.50 N 64 19 NE A ARG 11 ? ? CZ A ARG 11 ? ? NH1 A ARG 11 ? ? 123.58 120.30 3.28 0.50 N 65 20 NE A ARG 5 ? ? CZ A ARG 5 ? ? NH1 A ARG 5 ? ? 123.67 120.30 3.37 0.50 N 66 20 NE A ARG 8 ? ? CZ A ARG 8 ? ? NH1 A ARG 8 ? ? 123.95 120.30 3.65 0.50 N 67 20 CB A VAL 10 ? ? CA A VAL 10 ? ? C A VAL 10 ? ? 123.51 111.40 12.11 1.90 N 68 20 NE A ARG 11 ? ? CZ A ARG 11 ? ? NH1 A ARG 11 ? ? 124.00 120.30 3.70 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 4 ? ? -106.80 -97.61 2 1 ASN A 6 ? ? -164.48 96.29 3 1 VAL A 10 ? ? -132.99 -34.96 4 2 GLN A 4 ? ? -76.40 -108.99 5 2 ASN A 6 ? ? -171.85 94.28 6 2 ILE A 7 ? ? -79.06 -79.92 7 2 ARG A 8 ? ? 65.51 -123.46 8 2 VAL A 10 ? ? -18.57 115.01 9 3 GLN A 4 ? ? -78.78 -111.32 10 3 ASN A 6 ? ? -170.30 102.87 11 4 GLN A 4 ? ? -71.18 -105.64 12 4 ARG A 5 ? ? -144.53 18.70 13 4 ILE A 7 ? ? -78.97 -73.16 14 4 ARG A 8 ? ? 10.18 83.80 15 4 VAL A 10 ? ? -157.23 -65.78 16 5 GLN A 2 ? ? -145.28 28.31 17 5 TRP A 3 ? ? -57.01 -179.31 18 5 GLN A 4 ? ? -80.30 -99.77 19 5 ARG A 5 ? ? -151.71 69.51 20 5 ASN A 6 ? ? -158.55 82.76 21 5 ILE A 7 ? ? -93.00 -68.79 22 5 VAL A 10 ? ? -141.42 -66.15 23 6 GLN A 4 ? ? -126.50 -57.97 24 6 ASN A 6 ? ? -167.51 98.30 25 6 ILE A 7 ? ? -90.60 -69.49 26 7 GLN A 4 ? ? -126.03 -65.75 27 7 ASN A 6 ? ? -165.61 84.84 28 7 VAL A 10 ? ? 56.19 -173.86 29 8 GLN A 2 ? ? -144.59 17.32 30 8 TRP A 3 ? ? -48.92 179.06 31 8 GLN A 4 ? ? -77.34 -105.14 32 8 ASN A 6 ? ? -151.01 85.54 33 9 ASN A 6 ? ? -177.55 83.27 34 9 VAL A 10 ? ? -127.63 -76.18 35 10 GLN A 4 ? ? -81.59 -101.52 36 10 ARG A 5 ? ? -140.79 57.10 37 10 ASN A 6 ? ? -165.89 106.65 38 10 VAL A 10 ? ? 57.61 -160.37 39 11 GLN A 4 ? ? -72.22 -118.20 40 11 ASN A 6 ? ? -170.70 72.05 41 11 ARG A 8 ? ? -52.00 105.34 42 11 VAL A 10 ? ? -150.74 -36.62 43 12 GLN A 2 ? ? -143.72 35.09 44 12 TRP A 3 ? ? -60.74 -178.01 45 12 GLN A 4 ? ? -79.05 -100.74 46 12 ARG A 5 ? ? -150.40 71.54 47 12 ASN A 6 ? ? -154.62 79.26 48 12 ILE A 7 ? ? -101.39 -71.26 49 13 ARG A 5 ? ? -91.92 -87.55 50 13 ILE A 7 ? ? -55.86 -74.99 51 13 VAL A 10 ? ? -147.52 -42.57 52 14 GLN A 4 ? ? -139.71 -56.61 53 14 ARG A 5 ? ? -110.82 64.73 54 14 ASN A 6 ? ? -155.86 64.01 55 14 ILE A 7 ? ? -88.68 -70.56 56 15 GLN A 4 ? ? -91.37 -97.19 57 15 ILE A 7 ? ? -78.28 -76.31 58 15 VAL A 10 ? ? -150.51 -41.95 59 16 GLN A 4 ? ? -98.21 -104.69 60 16 ASN A 6 ? ? -167.26 91.76 61 16 ILE A 7 ? ? -76.06 -86.00 62 16 ARG A 8 ? ? 67.99 -12.61 63 16 VAL A 10 ? ? -148.62 -95.02 64 17 ARG A 5 ? ? -96.64 -98.87 65 17 ILE A 7 ? ? -48.41 -84.22 66 17 ARG A 8 ? ? 58.73 -169.53 67 17 LYS A 9 ? ? -140.68 53.44 68 17 VAL A 10 ? ? -153.54 -40.83 69 18 GLN A 4 ? ? -91.13 -103.13 70 18 ASN A 6 ? ? -170.41 97.01 71 18 VAL A 10 ? ? -142.18 -46.97 72 19 GLN A 4 ? ? -129.42 -54.94 73 19 ASN A 6 ? ? -174.69 107.09 74 19 ILE A 7 ? ? -74.61 -163.18 75 19 ARG A 8 ? ? 72.39 -169.83 76 19 VAL A 10 ? ? 58.21 -152.62 77 20 GLN A 4 ? ? -69.12 -107.80 78 20 ARG A 5 ? ? -144.69 14.27 79 20 ILE A 7 ? ? -74.00 -74.78 80 20 ARG A 8 ? ? 33.91 86.27 81 20 LYS A 9 ? ? -65.37 96.59 82 20 VAL A 10 ? ? 51.09 -133.96 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 12 _pdbx_validate_planes.auth_comp_id ARG _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 8 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.078 _pdbx_validate_planes.type 'SIDE CHAIN' # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'LAURIC ACID' _pdbx_entity_nonpoly.comp_id DAO #