data_2HBW # _entry.id 2HBW # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2HBW pdb_00002hbw 10.2210/pdb2hbw/pdb RCSB RCSB038174 ? ? WWPDB D_1000038174 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 360689 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 2HBW _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2006-06-14 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Structural Basis of Murein Peptide Specificity of a gamma-D-Glutamyl-L-Diamino Acid Endopeptidase.' _citation.journal_abbrev Structure _citation.journal_volume 17 _citation.page_first 303 _citation.page_last 313 _citation.year 2009 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19217401 _citation.pdbx_database_id_DOI 10.1016/j.str.2008.12.008 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Xu, Q.' 1 ? primary 'Sudek, S.' 2 ? primary 'McMullan, D.' 3 ? primary 'Miller, M.D.' 4 ? primary 'Geierstanger, B.' 5 ? primary 'Jones, D.H.' 6 ? primary 'Krishna, S.S.' 7 ? primary 'Spraggon, G.' 8 ? primary 'Bursalay, B.' 9 ? primary 'Abdubek, P.' 10 ? primary 'Acosta, C.' 11 ? primary 'Ambing, E.' 12 ? primary 'Astakhova, T.' 13 ? primary 'Axelrod, H.L.' 14 ? primary 'Carlton, D.' 15 ? primary 'Caruthers, J.' 16 ? primary 'Chiu, H.J.' 17 ? primary 'Clayton, T.' 18 ? primary 'Deller, M.C.' 19 ? primary 'Duan, L.' 20 ? primary 'Elias, Y.' 21 ? primary 'Elsliger, M.A.' 22 ? primary 'Feuerhelm, J.' 23 ? primary 'Grzechnik, S.K.' 24 ? primary 'Hale, J.' 25 ? primary 'Won Han, G.' 26 ? primary 'Haugen, J.' 27 ? primary 'Jaroszewski, L.' 28 ? primary 'Jin, K.K.' 29 ? primary 'Klock, H.E.' 30 ? primary 'Knuth, M.W.' 31 ? primary 'Kozbial, P.' 32 ? primary 'Kumar, A.' 33 ? primary 'Marciano, D.' 34 ? primary 'Morse, A.T.' 35 ? primary 'Nigoghossian, E.' 36 ? primary 'Okach, L.' 37 ? primary 'Oommachen, S.' 38 ? primary 'Paulsen, J.' 39 ? primary 'Reyes, R.' 40 ? primary 'Rife, C.L.' 41 ? primary 'Trout, C.V.' 42 ? primary 'van den Bedem, H.' 43 ? primary 'Weekes, D.' 44 ? primary 'White, A.' 45 ? primary 'Wolf, G.' 46 ? primary 'Zubieta, C.' 47 ? primary 'Hodgson, K.O.' 48 ? primary 'Wooley, J.' 49 ? primary 'Deacon, A.M.' 50 ? primary 'Godzik, A.' 51 ? primary 'Lesley, S.A.' 52 ? primary 'Wilson, I.A.' 53 ? # _cell.entry_id 2HBW _cell.length_a 76.480 _cell.length_b 86.891 _cell.length_c 37.288 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2HBW _symmetry.Int_Tables_number 18 _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'NLP/P60 protein' 25533.242 1 ? ? ? ? 2 non-polymer syn 'ACETATE ION' 59.044 2 ? ? ? ? 3 non-polymer syn 'UNKNOWN LIGAND' ? 1 ? ? ? ? 4 water nat water 18.015 345 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)LSNLESSIQSPKSGEYQCLAALNLYDSPECTSLATQAAVGRHLQVTSNQQGAAVEVCLCEDDYPGWLSLGDLGL LKPATVLYQAKSFSESEIKKLLPGAIAFTQKA(MSE)QQSNYYLWGGTVGPNYDCSGL(MSE)QAAFVSVGIWLPRDAYQ QEAFTQAITIDELAPGDLVFFGTPVKATHVGLYLGDGCYIHSSGKAQGRDGIGIDILSEQGDVVSRSYYQQLRGAGRVVK SYKPQRH ; _entity_poly.pdbx_seq_one_letter_code_can ;GMLSNLESSIQSPKSGEYQCLAALNLYDSPECTSLATQAAVGRHLQVTSNQQGAAVEVCLCEDDYPGWLSLGDLGLLKPA TVLYQAKSFSESEIKKLLPGAIAFTQKAMQQSNYYLWGGTVGPNYDCSGLMQAAFVSVGIWLPRDAYQQEAFTQAITIDE LAPGDLVFFGTPVKATHVGLYLGDGCYIHSSGKAQGRDGIGIDILSEQGDVVSRSYYQQLRGAGRVVKSYKPQRH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 360689 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 LEU n 1 4 SER n 1 5 ASN n 1 6 LEU n 1 7 GLU n 1 8 SER n 1 9 SER n 1 10 ILE n 1 11 GLN n 1 12 SER n 1 13 PRO n 1 14 LYS n 1 15 SER n 1 16 GLY n 1 17 GLU n 1 18 TYR n 1 19 GLN n 1 20 CYS n 1 21 LEU n 1 22 ALA n 1 23 ALA n 1 24 LEU n 1 25 ASN n 1 26 LEU n 1 27 TYR n 1 28 ASP n 1 29 SER n 1 30 PRO n 1 31 GLU n 1 32 CYS n 1 33 THR n 1 34 SER n 1 35 LEU n 1 36 ALA n 1 37 THR n 1 38 GLN n 1 39 ALA n 1 40 ALA n 1 41 VAL n 1 42 GLY n 1 43 ARG n 1 44 HIS n 1 45 LEU n 1 46 GLN n 1 47 VAL n 1 48 THR n 1 49 SER n 1 50 ASN n 1 51 GLN n 1 52 GLN n 1 53 GLY n 1 54 ALA n 1 55 ALA n 1 56 VAL n 1 57 GLU n 1 58 VAL n 1 59 CYS n 1 60 LEU n 1 61 CYS n 1 62 GLU n 1 63 ASP n 1 64 ASP n 1 65 TYR n 1 66 PRO n 1 67 GLY n 1 68 TRP n 1 69 LEU n 1 70 SER n 1 71 LEU n 1 72 GLY n 1 73 ASP n 1 74 LEU n 1 75 GLY n 1 76 LEU n 1 77 LEU n 1 78 LYS n 1 79 PRO n 1 80 ALA n 1 81 THR n 1 82 VAL n 1 83 LEU n 1 84 TYR n 1 85 GLN n 1 86 ALA n 1 87 LYS n 1 88 SER n 1 89 PHE n 1 90 SER n 1 91 GLU n 1 92 SER n 1 93 GLU n 1 94 ILE n 1 95 LYS n 1 96 LYS n 1 97 LEU n 1 98 LEU n 1 99 PRO n 1 100 GLY n 1 101 ALA n 1 102 ILE n 1 103 ALA n 1 104 PHE n 1 105 THR n 1 106 GLN n 1 107 LYS n 1 108 ALA n 1 109 MSE n 1 110 GLN n 1 111 GLN n 1 112 SER n 1 113 ASN n 1 114 TYR n 1 115 TYR n 1 116 LEU n 1 117 TRP n 1 118 GLY n 1 119 GLY n 1 120 THR n 1 121 VAL n 1 122 GLY n 1 123 PRO n 1 124 ASN n 1 125 TYR n 1 126 ASP n 1 127 CYS n 1 128 SER n 1 129 GLY n 1 130 LEU n 1 131 MSE n 1 132 GLN n 1 133 ALA n 1 134 ALA n 1 135 PHE n 1 136 VAL n 1 137 SER n 1 138 VAL n 1 139 GLY n 1 140 ILE n 1 141 TRP n 1 142 LEU n 1 143 PRO n 1 144 ARG n 1 145 ASP n 1 146 ALA n 1 147 TYR n 1 148 GLN n 1 149 GLN n 1 150 GLU n 1 151 ALA n 1 152 PHE n 1 153 THR n 1 154 GLN n 1 155 ALA n 1 156 ILE n 1 157 THR n 1 158 ILE n 1 159 ASP n 1 160 GLU n 1 161 LEU n 1 162 ALA n 1 163 PRO n 1 164 GLY n 1 165 ASP n 1 166 LEU n 1 167 VAL n 1 168 PHE n 1 169 PHE n 1 170 GLY n 1 171 THR n 1 172 PRO n 1 173 VAL n 1 174 LYS n 1 175 ALA n 1 176 THR n 1 177 HIS n 1 178 VAL n 1 179 GLY n 1 180 LEU n 1 181 TYR n 1 182 LEU n 1 183 GLY n 1 184 ASP n 1 185 GLY n 1 186 CYS n 1 187 TYR n 1 188 ILE n 1 189 HIS n 1 190 SER n 1 191 SER n 1 192 GLY n 1 193 LYS n 1 194 ALA n 1 195 GLN n 1 196 GLY n 1 197 ARG n 1 198 ASP n 1 199 GLY n 1 200 ILE n 1 201 GLY n 1 202 ILE n 1 203 ASP n 1 204 ILE n 1 205 LEU n 1 206 SER n 1 207 GLU n 1 208 GLN n 1 209 GLY n 1 210 ASP n 1 211 VAL n 1 212 VAL n 1 213 SER n 1 214 ARG n 1 215 SER n 1 216 TYR n 1 217 TYR n 1 218 GLN n 1 219 GLN n 1 220 LEU n 1 221 ARG n 1 222 GLY n 1 223 ALA n 1 224 GLY n 1 225 ARG n 1 226 VAL n 1 227 VAL n 1 228 LYS n 1 229 SER n 1 230 TYR n 1 231 LYS n 1 232 PRO n 1 233 GLN n 1 234 ARG n 1 235 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Anabaena _entity_src_gen.pdbx_gene_src_gene yp_323898.1 _entity_src_gen.gene_src_species 'Anabaena variabilis' _entity_src_gen.gene_src_strain 'ATCC 29413' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Anabaena variabilis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 240292 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q3M7N3_ANAVT _struct_ref.pdbx_db_accession Q3M7N3 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2HBW _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 235 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q3M7N3 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 234 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 234 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2HBW _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q3M7N3 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNL non-polymer . 'UNKNOWN LIGAND' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 2HBW # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 49.28 _exptl_crystal.density_Matthews 2.43 _exptl_crystal.description ? _exptl_crystal.density_meas ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP, NANODROP' _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '20.0% 1,4-butanediol, 0.1M Acetate, pH 4.5, VAPOR DIFFUSION, SITTING DROP, NANODROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2006-02-13 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.979008 1.0 2 0.918370 1.0 3 0.979291 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.979008, 0.918370, 0.979291' _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 2HBW _reflns.d_resolution_high 1.050 _reflns.d_resolution_low 35.007 _reflns.number_obs 116587 _reflns.pdbx_Rmerge_I_obs 0.075 _reflns.pdbx_netI_over_sigmaI 10.830 _reflns.percent_possible_obs 96.700 _reflns.B_iso_Wilson_estimate 11.574 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.05 1.09 49975 ? ? 0.679 2.3 ? ? ? ? 11021 90.40 1 1 1.09 1.13 45120 ? ? 0.522 2.9 ? ? ? ? 9878 93.30 2 1 1.13 1.18 49293 ? ? 0.394 3.8 ? ? ? ? 10690 94.80 3 1 1.18 1.24 50164 ? ? 0.329 4.6 ? ? ? ? 10824 96.00 4 1 1.24 1.32 54124 ? ? 0.271 5.6 ? ? ? ? 11613 96.80 5 1 1.32 1.42 52781 ? ? 0.201 7.2 ? ? ? ? 11257 97.80 6 1 1.42 1.57 56946 ? ? 0.145 9.6 ? ? ? ? 12073 98.80 7 1 1.57 1.80 57162 ? ? 0.098 13.5 ? ? ? ? 11681 99.20 8 1 1.80 ? 92770 ? ? 0.073 22.7 ? ? ? ? 11550 99.80 9 1 # _refine.entry_id 2HBW _refine.ls_d_res_high 1.050 _refine.ls_d_res_low 35.007 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.960 _refine.ls_number_reflns_obs 116513 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. AN UNKNOWN LIGAND UNL IS LOCATED NEAR THE CATALYTIC RESIDUE CYS 126. DUE TO THE POOR DENSITY, IT CAN NOT BE UNAMBIGUOUSLY IDENTIFIED. IT RESEMBLES A SHORT PEPTIDE. THERE ARE ADDITIONAL DISORDERED DENSITY AROUND CYS126. 3. BOTH 106 AND 116 SIDE CHAINS ARE DISORDERED ACCORDING TO DENSITY, HOWEVER, ONLY THE MAIN CONFORMATION CAN BE BUILT UNAMBIGUOUSLY, AS A RESULT, SIDE CHAINS OF THESE RESIDUES ARE MODELED WITH PARTIAL OCCUPANCIES. 4. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.7 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 5. N-TERMINAL FROM 1 TO 14 ARE DISORDERED. 6. THERE ARE SOME UNEXPLAINED DENSITIES IN THE SOLVENT AREA. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.125 _refine.ls_R_factor_R_free 0.149 _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 5839 _refine.B_iso_mean 9.246 _refine.aniso_B[1][1] 0.190 _refine.aniso_B[2][2] 0.240 _refine.aniso_B[3][3] -0.430 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.981 _refine.correlation_coeff_Fo_to_Fc_free 0.975 _refine.pdbx_overall_ESU_R 0.021 _refine.pdbx_overall_ESU_R_Free 0.023 _refine.overall_SU_ML 0.016 _refine.overall_SU_B 0.716 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs 0.126 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1675 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 19 _refine_hist.number_atoms_solvent 345 _refine_hist.number_atoms_total 2039 _refine_hist.d_res_high 1.050 _refine_hist.d_res_low 35.007 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 2009 0.020 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1295 0.003 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2772 1.936 1.960 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 3197 1.067 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 280 6.084 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 88 32.506 25.114 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 313 10.770 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 8 12.773 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 298 0.121 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 2451 0.010 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 415 0.004 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 460 0.295 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 1482 0.203 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 1023 0.186 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 1100 0.093 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 264 0.229 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 18 0.362 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 35 0.186 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 30 0.190 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1304 2.753 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 521 2.188 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2087 3.631 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 795 5.273 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 685 6.424 11.000 ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 3654 2.291 3.000 ? 'X-RAY DIFFRACTION' ? r_sphericity_free 363 12.929 3.000 ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded 3240 5.886 3.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.050 _refine_ls_shell.d_res_low 1.068 _refine_ls_shell.pdbx_total_number_of_bins_used 30 _refine_ls_shell.percent_reflns_obs 99.960 _refine_ls_shell.number_reflns_R_work 5415 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.264 _refine_ls_shell.R_factor_R_free 0.296 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 280 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 5695 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2HBW _struct.title 'Crystal structure of a putative endopeptidase (ava_3396) from anabaena variabilis atcc 29413 at 1.05 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;Nlp/p60 family protein, structural genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, hydrolase ; _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.entry_id 2HBW # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 72 ? GLY A 75 ? GLY A 71 GLY A 74 5 ? 4 HELX_P HELX_P2 2 SER A 90 ? GLN A 110 ? SER A 89 GLN A 109 1 ? 21 HELX_P HELX_P3 3 ASP A 126 ? SER A 137 ? ASP A 125 SER A 136 1 ? 12 HELX_P HELX_P4 4 ASP A 145 ? THR A 153 ? ASP A 144 THR A 152 1 ? 9 HELX_P HELX_P5 5 THR A 157 ? LEU A 161 ? THR A 156 LEU A 160 5 ? 5 HELX_P HELX_P6 6 ASP A 210 ? GLN A 219 ? ASP A 209 GLN A 218 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ALA 108 C ? ? ? 1_555 A MSE 109 N ? ? A ALA 107 A MSE 108 1_555 ? ? ? ? ? ? ? 1.349 ? ? covale2 covale both ? A MSE 109 C ? ? ? 1_555 A GLN 110 N ? ? A MSE 108 A GLN 109 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale3 covale both ? A LEU 130 C ? ? ? 1_555 A MSE 131 N ? ? A LEU 129 A MSE 130 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale4 covale both ? A MSE 131 C ? ? ? 1_555 A GLN 132 N ? ? A MSE 130 A GLN 131 1_555 ? ? ? ? ? ? ? 1.321 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 122 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 121 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 123 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 122 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 7.63 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? C ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 65 ? SER A 70 ? TYR A 64 SER A 69 A 2 ALA A 55 ? LEU A 60 ? ALA A 54 LEU A 59 A 3 HIS A 44 ? GLN A 52 ? HIS A 43 GLN A 51 A 4 GLY A 16 ? CYS A 20 ? GLY A 15 CYS A 19 A 5 LEU A 77 ? PRO A 79 ? LEU A 76 PRO A 78 B 1 LEU A 24 ? TYR A 27 ? LEU A 23 TYR A 26 B 2 LEU A 35 ? ALA A 39 ? LEU A 34 ALA A 38 C 1 GLN A 154 ? ILE A 156 ? GLN A 153 ILE A 155 C 2 LEU A 220 ? ARG A 225 ? LEU A 219 ARG A 224 C 3 LEU A 166 ? GLY A 170 ? LEU A 165 GLY A 169 C 4 ALA A 175 ? GLY A 183 ? ALA A 174 GLY A 182 C 5 CYS A 186 ? SER A 191 ? CYS A 185 SER A 190 C 6 GLY A 199 ? ILE A 204 ? GLY A 198 ILE A 203 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LEU A 69 ? O LEU A 68 N VAL A 56 ? N VAL A 55 A 2 3 O CYS A 59 ? O CYS A 58 N GLN A 46 ? N GLN A 45 A 3 4 O LEU A 45 ? O LEU A 44 N TYR A 18 ? N TYR A 17 A 4 5 N GLN A 19 ? N GLN A 18 O LYS A 78 ? O LYS A 77 B 1 2 N LEU A 26 ? N LEU A 25 O ALA A 36 ? O ALA A 35 C 1 2 N GLN A 154 ? N GLN A 153 O ARG A 225 ? O ARG A 224 C 2 3 O ARG A 221 ? O ARG A 220 N PHE A 168 ? N PHE A 167 C 3 4 N VAL A 167 ? N VAL A 166 O GLY A 179 ? O GLY A 178 C 4 5 N LEU A 182 ? N LEU A 181 O CYS A 186 ? O CYS A 185 C 5 6 N TYR A 187 ? N TYR A 186 O ASP A 203 ? O ASP A 202 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ACT 235 ? 9 'BINDING SITE FOR RESIDUE ACT A 235' AC2 Software A ACT 236 ? 6 'BINDING SITE FOR RESIDUE ACT A 236' AC3 Software A UNL 237 ? 12 'BINDING SITE FOR RESIDUE UNL A 237' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 GLU A 150 ? GLU A 149 . ? 1_555 ? 2 AC1 9 ALA A 151 ? ALA A 150 . ? 1_555 ? 3 AC1 9 THR A 153 ? THR A 152 . ? 1_555 ? 4 AC1 9 ALA A 155 ? ALA A 154 . ? 1_555 ? 5 AC1 9 HOH E . ? HOH A 252 . ? 1_555 ? 6 AC1 9 HOH E . ? HOH A 281 . ? 1_555 ? 7 AC1 9 HOH E . ? HOH A 316 . ? 1_555 ? 8 AC1 9 HOH E . ? HOH A 465 . ? 1_555 ? 9 AC1 9 HOH E . ? HOH A 490 . ? 1_555 ? 10 AC2 6 TYR A 115 ? TYR A 114 . ? 1_555 ? 11 AC2 6 HIS A 177 ? HIS A 176 . ? 1_555 ? 12 AC2 6 SER A 191 ? SER A 190 . ? 1_555 ? 13 AC2 6 GLY A 192 ? GLY A 191 . ? 1_555 ? 14 AC2 6 TYR A 216 ? TYR A 215 . ? 1_555 ? 15 AC2 6 HOH E . ? HOH A 291 . ? 1_555 ? 16 AC3 12 ALA A 36 ? ALA A 35 . ? 1_555 ? 17 AC3 12 TYR A 65 ? TYR A 64 . ? 1_555 ? 18 AC3 12 TRP A 117 ? TRP A 116 . ? 1_555 ? 19 AC3 12 ASP A 126 ? ASP A 125 . ? 1_555 ? 20 AC3 12 SER A 128 ? SER A 127 . ? 1_555 ? 21 AC3 12 ASP A 145 ? ASP A 144 . ? 1_555 ? 22 AC3 12 ALA A 146 ? ALA A 145 . ? 1_555 ? 23 AC3 12 HOH E . ? HOH A 258 . ? 1_555 ? 24 AC3 12 HOH E . ? HOH A 330 . ? 1_555 ? 25 AC3 12 HOH E . ? HOH A 402 . ? 1_555 ? 26 AC3 12 HOH E . ? HOH A 531 . ? 1_555 ? 27 AC3 12 HOH E . ? HOH A 538 . ? 1_555 ? # _atom_sites.entry_id 2HBW _atom_sites.fract_transf_matrix[1][1] 0.01307 _atom_sites.fract_transf_matrix[1][2] 0.00000 _atom_sites.fract_transf_matrix[1][3] 0.00000 _atom_sites.fract_transf_matrix[2][1] 0.00000 _atom_sites.fract_transf_matrix[2][2] 0.01151 _atom_sites.fract_transf_matrix[2][3] 0.00000 _atom_sites.fract_transf_matrix[3][1] 0.00000 _atom_sites.fract_transf_matrix[3][2] 0.00000 _atom_sites.fract_transf_matrix[3][3] 0.02682 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 ? ? ? A . n A 1 3 LEU 3 2 ? ? ? A . n A 1 4 SER 4 3 ? ? ? A . n A 1 5 ASN 5 4 ? ? ? A . n A 1 6 LEU 6 5 ? ? ? A . n A 1 7 GLU 7 6 ? ? ? A . n A 1 8 SER 8 7 ? ? ? A . n A 1 9 SER 9 8 ? ? ? A . n A 1 10 ILE 10 9 ? ? ? A . n A 1 11 GLN 11 10 ? ? ? A . n A 1 12 SER 12 11 ? ? ? A . n A 1 13 PRO 13 12 ? ? ? A . n A 1 14 LYS 14 13 ? ? ? A . n A 1 15 SER 15 14 14 SER SER A . n A 1 16 GLY 16 15 15 GLY GLY A . n A 1 17 GLU 17 16 16 GLU GLU A . n A 1 18 TYR 18 17 17 TYR TYR A . n A 1 19 GLN 19 18 18 GLN GLN A . n A 1 20 CYS 20 19 19 CYS CYS A . n A 1 21 LEU 21 20 20 LEU LEU A . n A 1 22 ALA 22 21 21 ALA ALA A . n A 1 23 ALA 23 22 22 ALA ALA A . n A 1 24 LEU 24 23 23 LEU LEU A . n A 1 25 ASN 25 24 24 ASN ASN A . n A 1 26 LEU 26 25 25 LEU LEU A . n A 1 27 TYR 27 26 26 TYR TYR A . n A 1 28 ASP 28 27 27 ASP ASP A . n A 1 29 SER 29 28 28 SER SER A . n A 1 30 PRO 30 29 29 PRO PRO A . n A 1 31 GLU 31 30 30 GLU GLU A . n A 1 32 CYS 32 31 31 CYS CYS A . n A 1 33 THR 33 32 32 THR THR A . n A 1 34 SER 34 33 33 SER SER A . n A 1 35 LEU 35 34 34 LEU LEU A . n A 1 36 ALA 36 35 35 ALA ALA A . n A 1 37 THR 37 36 36 THR THR A . n A 1 38 GLN 38 37 37 GLN GLN A . n A 1 39 ALA 39 38 38 ALA ALA A . n A 1 40 ALA 40 39 39 ALA ALA A . n A 1 41 VAL 41 40 40 VAL VAL A . n A 1 42 GLY 42 41 41 GLY GLY A . n A 1 43 ARG 43 42 42 ARG ARG A . n A 1 44 HIS 44 43 43 HIS HIS A . n A 1 45 LEU 45 44 44 LEU LEU A . n A 1 46 GLN 46 45 45 GLN GLN A . n A 1 47 VAL 47 46 46 VAL VAL A . n A 1 48 THR 48 47 47 THR THR A . n A 1 49 SER 49 48 48 SER SER A . n A 1 50 ASN 50 49 49 ASN ASN A . n A 1 51 GLN 51 50 50 GLN GLN A . n A 1 52 GLN 52 51 51 GLN GLN A . n A 1 53 GLY 53 52 52 GLY GLY A . n A 1 54 ALA 54 53 53 ALA ALA A . n A 1 55 ALA 55 54 54 ALA ALA A . n A 1 56 VAL 56 55 55 VAL VAL A . n A 1 57 GLU 57 56 56 GLU GLU A . n A 1 58 VAL 58 57 57 VAL VAL A . n A 1 59 CYS 59 58 58 CYS CYS A . n A 1 60 LEU 60 59 59 LEU LEU A . n A 1 61 CYS 61 60 60 CYS CYS A . n A 1 62 GLU 62 61 61 GLU GLU A . n A 1 63 ASP 63 62 62 ASP ASP A . n A 1 64 ASP 64 63 63 ASP ASP A . n A 1 65 TYR 65 64 64 TYR TYR A . n A 1 66 PRO 66 65 65 PRO PRO A . n A 1 67 GLY 67 66 66 GLY GLY A . n A 1 68 TRP 68 67 67 TRP TRP A . n A 1 69 LEU 69 68 68 LEU LEU A . n A 1 70 SER 70 69 69 SER SER A . n A 1 71 LEU 71 70 70 LEU LEU A . n A 1 72 GLY 72 71 71 GLY GLY A . n A 1 73 ASP 73 72 72 ASP ASP A . n A 1 74 LEU 74 73 73 LEU LEU A . n A 1 75 GLY 75 74 74 GLY GLY A . n A 1 76 LEU 76 75 75 LEU LEU A . n A 1 77 LEU 77 76 76 LEU LEU A . n A 1 78 LYS 78 77 77 LYS LYS A . n A 1 79 PRO 79 78 78 PRO PRO A . n A 1 80 ALA 80 79 79 ALA ALA A . n A 1 81 THR 81 80 80 THR THR A . n A 1 82 VAL 82 81 81 VAL VAL A . n A 1 83 LEU 83 82 82 LEU LEU A . n A 1 84 TYR 84 83 83 TYR TYR A . n A 1 85 GLN 85 84 84 GLN GLN A . n A 1 86 ALA 86 85 85 ALA ALA A . n A 1 87 LYS 87 86 86 LYS LYS A . n A 1 88 SER 88 87 87 SER SER A . n A 1 89 PHE 89 88 88 PHE PHE A . n A 1 90 SER 90 89 89 SER SER A . n A 1 91 GLU 91 90 90 GLU GLU A . n A 1 92 SER 92 91 91 SER SER A . n A 1 93 GLU 93 92 92 GLU GLU A . n A 1 94 ILE 94 93 93 ILE ILE A . n A 1 95 LYS 95 94 94 LYS LYS A . n A 1 96 LYS 96 95 95 LYS LYS A . n A 1 97 LEU 97 96 96 LEU LEU A . n A 1 98 LEU 98 97 97 LEU LEU A . n A 1 99 PRO 99 98 98 PRO PRO A . n A 1 100 GLY 100 99 99 GLY GLY A . n A 1 101 ALA 101 100 100 ALA ALA A . n A 1 102 ILE 102 101 101 ILE ILE A . n A 1 103 ALA 103 102 102 ALA ALA A . n A 1 104 PHE 104 103 103 PHE PHE A . n A 1 105 THR 105 104 104 THR THR A . n A 1 106 GLN 106 105 105 GLN GLN A . n A 1 107 LYS 107 106 106 LYS LYS A . n A 1 108 ALA 108 107 107 ALA ALA A . n A 1 109 MSE 109 108 108 MSE MSE A . n A 1 110 GLN 110 109 109 GLN GLN A . n A 1 111 GLN 111 110 110 GLN GLN A . n A 1 112 SER 112 111 111 SER SER A . n A 1 113 ASN 113 112 112 ASN ASN A . n A 1 114 TYR 114 113 113 TYR TYR A . n A 1 115 TYR 115 114 114 TYR TYR A . n A 1 116 LEU 116 115 115 LEU LEU A . n A 1 117 TRP 117 116 116 TRP TRP A . n A 1 118 GLY 118 117 117 GLY GLY A . n A 1 119 GLY 119 118 118 GLY GLY A . n A 1 120 THR 120 119 119 THR THR A . n A 1 121 VAL 121 120 120 VAL VAL A . n A 1 122 GLY 122 121 121 GLY GLY A . n A 1 123 PRO 123 122 122 PRO PRO A . n A 1 124 ASN 124 123 123 ASN ASN A . n A 1 125 TYR 125 124 124 TYR TYR A . n A 1 126 ASP 126 125 125 ASP ASP A . n A 1 127 CYS 127 126 126 CYS CYS A . n A 1 128 SER 128 127 127 SER SER A . n A 1 129 GLY 129 128 128 GLY GLY A . n A 1 130 LEU 130 129 129 LEU LEU A . n A 1 131 MSE 131 130 130 MSE MSE A . n A 1 132 GLN 132 131 131 GLN GLN A . n A 1 133 ALA 133 132 132 ALA ALA A . n A 1 134 ALA 134 133 133 ALA ALA A . n A 1 135 PHE 135 134 134 PHE PHE A . n A 1 136 VAL 136 135 135 VAL VAL A . n A 1 137 SER 137 136 136 SER SER A . n A 1 138 VAL 138 137 137 VAL VAL A . n A 1 139 GLY 139 138 138 GLY GLY A . n A 1 140 ILE 140 139 139 ILE ILE A . n A 1 141 TRP 141 140 140 TRP TRP A . n A 1 142 LEU 142 141 141 LEU LEU A . n A 1 143 PRO 143 142 142 PRO PRO A . n A 1 144 ARG 144 143 143 ARG ARG A . n A 1 145 ASP 145 144 144 ASP ASP A . n A 1 146 ALA 146 145 145 ALA ALA A . n A 1 147 TYR 147 146 146 TYR TYR A . n A 1 148 GLN 148 147 147 GLN GLN A . n A 1 149 GLN 149 148 148 GLN GLN A . n A 1 150 GLU 150 149 149 GLU GLU A . n A 1 151 ALA 151 150 150 ALA ALA A . n A 1 152 PHE 152 151 151 PHE PHE A . n A 1 153 THR 153 152 152 THR THR A . n A 1 154 GLN 154 153 153 GLN GLN A . n A 1 155 ALA 155 154 154 ALA ALA A . n A 1 156 ILE 156 155 155 ILE ILE A . n A 1 157 THR 157 156 156 THR THR A . n A 1 158 ILE 158 157 157 ILE ILE A . n A 1 159 ASP 159 158 158 ASP ASP A . n A 1 160 GLU 160 159 159 GLU GLU A . n A 1 161 LEU 161 160 160 LEU LEU A . n A 1 162 ALA 162 161 161 ALA ALA A . n A 1 163 PRO 163 162 162 PRO PRO A . n A 1 164 GLY 164 163 163 GLY GLY A . n A 1 165 ASP 165 164 164 ASP ASP A . n A 1 166 LEU 166 165 165 LEU LEU A . n A 1 167 VAL 167 166 166 VAL VAL A . n A 1 168 PHE 168 167 167 PHE PHE A . n A 1 169 PHE 169 168 168 PHE PHE A . n A 1 170 GLY 170 169 169 GLY GLY A . n A 1 171 THR 171 170 170 THR THR A . n A 1 172 PRO 172 171 171 PRO PRO A . n A 1 173 VAL 173 172 172 VAL VAL A . n A 1 174 LYS 174 173 173 LYS LYS A . n A 1 175 ALA 175 174 174 ALA ALA A . n A 1 176 THR 176 175 175 THR THR A . n A 1 177 HIS 177 176 176 HIS HIS A . n A 1 178 VAL 178 177 177 VAL VAL A . n A 1 179 GLY 179 178 178 GLY GLY A . n A 1 180 LEU 180 179 179 LEU LEU A . n A 1 181 TYR 181 180 180 TYR TYR A . n A 1 182 LEU 182 181 181 LEU LEU A . n A 1 183 GLY 183 182 182 GLY GLY A . n A 1 184 ASP 184 183 183 ASP ASP A . n A 1 185 GLY 185 184 184 GLY GLY A . n A 1 186 CYS 186 185 185 CYS CYS A . n A 1 187 TYR 187 186 186 TYR TYR A . n A 1 188 ILE 188 187 187 ILE ILE A . n A 1 189 HIS 189 188 188 HIS HIS A . n A 1 190 SER 190 189 189 SER SER A . n A 1 191 SER 191 190 190 SER SER A . n A 1 192 GLY 192 191 191 GLY GLY A . n A 1 193 LYS 193 192 192 LYS LYS A . n A 1 194 ALA 194 193 193 ALA ALA A . n A 1 195 GLN 195 194 194 GLN GLN A . n A 1 196 GLY 196 195 195 GLY GLY A . n A 1 197 ARG 197 196 196 ARG ARG A . n A 1 198 ASP 198 197 197 ASP ASP A . n A 1 199 GLY 199 198 198 GLY GLY A . n A 1 200 ILE 200 199 199 ILE ILE A . n A 1 201 GLY 201 200 200 GLY GLY A . n A 1 202 ILE 202 201 201 ILE ILE A . n A 1 203 ASP 203 202 202 ASP ASP A . n A 1 204 ILE 204 203 203 ILE ILE A . n A 1 205 LEU 205 204 204 LEU LEU A . n A 1 206 SER 206 205 205 SER SER A . n A 1 207 GLU 207 206 206 GLU GLU A . n A 1 208 GLN 208 207 207 GLN GLN A . n A 1 209 GLY 209 208 208 GLY GLY A . n A 1 210 ASP 210 209 209 ASP ASP A . n A 1 211 VAL 211 210 210 VAL VAL A . n A 1 212 VAL 212 211 211 VAL VAL A . n A 1 213 SER 213 212 212 SER SER A . n A 1 214 ARG 214 213 213 ARG ARG A . n A 1 215 SER 215 214 214 SER SER A . n A 1 216 TYR 216 215 215 TYR TYR A . n A 1 217 TYR 217 216 216 TYR TYR A . n A 1 218 GLN 218 217 217 GLN GLN A . n A 1 219 GLN 219 218 218 GLN GLN A . n A 1 220 LEU 220 219 219 LEU LEU A . n A 1 221 ARG 221 220 220 ARG ARG A . n A 1 222 GLY 222 221 221 GLY GLY A . n A 1 223 ALA 223 222 222 ALA ALA A . n A 1 224 GLY 224 223 223 GLY GLY A . n A 1 225 ARG 225 224 224 ARG ARG A . n A 1 226 VAL 226 225 225 VAL VAL A . n A 1 227 VAL 227 226 226 VAL VAL A . n A 1 228 LYS 228 227 227 LYS LYS A . n A 1 229 SER 229 228 228 SER SER A . n A 1 230 TYR 230 229 229 TYR TYR A . n A 1 231 LYS 231 230 230 LYS LYS A . n A 1 232 PRO 232 231 231 PRO PRO A . n A 1 233 GLN 233 232 232 GLN GLN A . n A 1 234 ARG 234 233 233 ARG ARG A . n A 1 235 HIS 235 234 234 HIS HIS A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACT 1 235 2 ACT ACT A . C 2 ACT 1 236 3 ACT ACT A . D 3 UNL 1 237 1 UNL UNL A . E 4 HOH 1 238 4 HOH HOH A . E 4 HOH 2 239 5 HOH HOH A . E 4 HOH 3 240 6 HOH HOH A . E 4 HOH 4 241 7 HOH HOH A . E 4 HOH 5 242 8 HOH HOH A . E 4 HOH 6 243 9 HOH HOH A . E 4 HOH 7 244 10 HOH HOH A . E 4 HOH 8 245 11 HOH HOH A . E 4 HOH 9 246 12 HOH HOH A . E 4 HOH 10 247 13 HOH HOH A . E 4 HOH 11 248 14 HOH HOH A . E 4 HOH 12 249 15 HOH HOH A . E 4 HOH 13 250 16 HOH HOH A . E 4 HOH 14 251 17 HOH HOH A . E 4 HOH 15 252 18 HOH HOH A . E 4 HOH 16 253 19 HOH HOH A . E 4 HOH 17 254 20 HOH HOH A . E 4 HOH 18 255 21 HOH HOH A . E 4 HOH 19 256 22 HOH HOH A . E 4 HOH 20 257 23 HOH HOH A . E 4 HOH 21 258 24 HOH HOH A . E 4 HOH 22 259 25 HOH HOH A . E 4 HOH 23 260 26 HOH HOH A . E 4 HOH 24 261 27 HOH HOH A . E 4 HOH 25 262 28 HOH HOH A . E 4 HOH 26 263 29 HOH HOH A . E 4 HOH 27 264 30 HOH HOH A . E 4 HOH 28 265 31 HOH HOH A . E 4 HOH 29 266 32 HOH HOH A . E 4 HOH 30 267 33 HOH HOH A . E 4 HOH 31 268 34 HOH HOH A . E 4 HOH 32 269 35 HOH HOH A . E 4 HOH 33 270 36 HOH HOH A . E 4 HOH 34 271 37 HOH HOH A . E 4 HOH 35 272 38 HOH HOH A . E 4 HOH 36 273 39 HOH HOH A . E 4 HOH 37 274 40 HOH HOH A . E 4 HOH 38 275 41 HOH HOH A . E 4 HOH 39 276 42 HOH HOH A . E 4 HOH 40 277 43 HOH HOH A . E 4 HOH 41 278 44 HOH HOH A . E 4 HOH 42 279 45 HOH HOH A . E 4 HOH 43 280 46 HOH HOH A . E 4 HOH 44 281 47 HOH HOH A . E 4 HOH 45 282 48 HOH HOH A . E 4 HOH 46 283 49 HOH HOH A . E 4 HOH 47 284 50 HOH HOH A . E 4 HOH 48 285 51 HOH HOH A . E 4 HOH 49 286 52 HOH HOH A . E 4 HOH 50 287 53 HOH HOH A . E 4 HOH 51 288 54 HOH HOH A . E 4 HOH 52 289 55 HOH HOH A . E 4 HOH 53 290 56 HOH HOH A . E 4 HOH 54 291 57 HOH HOH A . E 4 HOH 55 292 58 HOH HOH A . E 4 HOH 56 293 59 HOH HOH A . E 4 HOH 57 294 60 HOH HOH A . E 4 HOH 58 295 61 HOH HOH A . E 4 HOH 59 296 62 HOH HOH A . E 4 HOH 60 297 63 HOH HOH A . E 4 HOH 61 298 64 HOH HOH A . E 4 HOH 62 299 65 HOH HOH A . E 4 HOH 63 300 66 HOH HOH A . E 4 HOH 64 301 67 HOH HOH A . E 4 HOH 65 302 68 HOH HOH A . E 4 HOH 66 303 69 HOH HOH A . E 4 HOH 67 304 70 HOH HOH A . E 4 HOH 68 305 71 HOH HOH A . E 4 HOH 69 306 72 HOH HOH A . E 4 HOH 70 307 73 HOH HOH A . E 4 HOH 71 308 74 HOH HOH A . E 4 HOH 72 309 75 HOH HOH A . E 4 HOH 73 310 76 HOH HOH A . E 4 HOH 74 311 77 HOH HOH A . E 4 HOH 75 312 78 HOH HOH A . E 4 HOH 76 313 79 HOH HOH A . E 4 HOH 77 314 80 HOH HOH A . E 4 HOH 78 315 81 HOH HOH A . E 4 HOH 79 316 82 HOH HOH A . E 4 HOH 80 317 83 HOH HOH A . E 4 HOH 81 318 84 HOH HOH A . E 4 HOH 82 319 85 HOH HOH A . E 4 HOH 83 320 86 HOH HOH A . E 4 HOH 84 321 87 HOH HOH A . E 4 HOH 85 322 88 HOH HOH A . E 4 HOH 86 323 89 HOH HOH A . E 4 HOH 87 324 90 HOH HOH A . E 4 HOH 88 325 91 HOH HOH A . E 4 HOH 89 326 92 HOH HOH A . E 4 HOH 90 327 93 HOH HOH A . E 4 HOH 91 328 94 HOH HOH A . E 4 HOH 92 329 95 HOH HOH A . E 4 HOH 93 330 96 HOH HOH A . E 4 HOH 94 331 97 HOH HOH A . E 4 HOH 95 332 98 HOH HOH A . E 4 HOH 96 333 99 HOH HOH A . E 4 HOH 97 334 100 HOH HOH A . E 4 HOH 98 335 101 HOH HOH A . E 4 HOH 99 336 102 HOH HOH A . E 4 HOH 100 337 103 HOH HOH A . E 4 HOH 101 338 104 HOH HOH A . E 4 HOH 102 339 105 HOH HOH A . E 4 HOH 103 340 106 HOH HOH A . E 4 HOH 104 341 107 HOH HOH A . E 4 HOH 105 342 108 HOH HOH A . E 4 HOH 106 343 109 HOH HOH A . E 4 HOH 107 344 110 HOH HOH A . E 4 HOH 108 345 111 HOH HOH A . E 4 HOH 109 346 112 HOH HOH A . E 4 HOH 110 347 113 HOH HOH A . E 4 HOH 111 348 114 HOH HOH A . E 4 HOH 112 349 115 HOH HOH A . E 4 HOH 113 350 116 HOH HOH A . E 4 HOH 114 351 117 HOH HOH A . E 4 HOH 115 352 118 HOH HOH A . E 4 HOH 116 353 119 HOH HOH A . E 4 HOH 117 354 120 HOH HOH A . E 4 HOH 118 355 121 HOH HOH A . E 4 HOH 119 356 122 HOH HOH A . E 4 HOH 120 357 123 HOH HOH A . E 4 HOH 121 358 124 HOH HOH A . E 4 HOH 122 359 125 HOH HOH A . E 4 HOH 123 360 126 HOH HOH A . E 4 HOH 124 361 127 HOH HOH A . E 4 HOH 125 362 128 HOH HOH A . E 4 HOH 126 363 129 HOH HOH A . E 4 HOH 127 364 130 HOH HOH A . E 4 HOH 128 365 131 HOH HOH A . E 4 HOH 129 366 132 HOH HOH A . E 4 HOH 130 367 133 HOH HOH A . E 4 HOH 131 368 134 HOH HOH A . E 4 HOH 132 369 135 HOH HOH A . E 4 HOH 133 370 136 HOH HOH A . E 4 HOH 134 371 137 HOH HOH A . E 4 HOH 135 372 138 HOH HOH A . E 4 HOH 136 373 139 HOH HOH A . E 4 HOH 137 374 140 HOH HOH A . E 4 HOH 138 375 141 HOH HOH A . E 4 HOH 139 376 142 HOH HOH A . E 4 HOH 140 377 143 HOH HOH A . E 4 HOH 141 378 144 HOH HOH A . E 4 HOH 142 379 145 HOH HOH A . E 4 HOH 143 380 146 HOH HOH A . E 4 HOH 144 381 147 HOH HOH A . E 4 HOH 145 382 148 HOH HOH A . E 4 HOH 146 383 149 HOH HOH A . E 4 HOH 147 384 150 HOH HOH A . E 4 HOH 148 385 151 HOH HOH A . E 4 HOH 149 386 152 HOH HOH A . E 4 HOH 150 387 153 HOH HOH A . E 4 HOH 151 388 154 HOH HOH A . E 4 HOH 152 389 155 HOH HOH A . E 4 HOH 153 390 156 HOH HOH A . E 4 HOH 154 391 157 HOH HOH A . E 4 HOH 155 392 158 HOH HOH A . E 4 HOH 156 393 159 HOH HOH A . E 4 HOH 157 394 160 HOH HOH A . E 4 HOH 158 395 161 HOH HOH A . E 4 HOH 159 396 162 HOH HOH A . E 4 HOH 160 397 163 HOH HOH A . E 4 HOH 161 398 164 HOH HOH A . E 4 HOH 162 399 165 HOH HOH A . E 4 HOH 163 400 166 HOH HOH A . E 4 HOH 164 401 167 HOH HOH A . E 4 HOH 165 402 168 HOH HOH A . E 4 HOH 166 403 169 HOH HOH A . E 4 HOH 167 404 170 HOH HOH A . E 4 HOH 168 405 171 HOH HOH A . E 4 HOH 169 406 172 HOH HOH A . E 4 HOH 170 407 173 HOH HOH A . E 4 HOH 171 408 174 HOH HOH A . E 4 HOH 172 409 175 HOH HOH A . E 4 HOH 173 410 176 HOH HOH A . E 4 HOH 174 411 177 HOH HOH A . E 4 HOH 175 412 178 HOH HOH A . E 4 HOH 176 413 179 HOH HOH A . E 4 HOH 177 414 180 HOH HOH A . E 4 HOH 178 415 181 HOH HOH A . E 4 HOH 179 416 182 HOH HOH A . E 4 HOH 180 417 183 HOH HOH A . E 4 HOH 181 418 184 HOH HOH A . E 4 HOH 182 419 185 HOH HOH A . E 4 HOH 183 420 186 HOH HOH A . E 4 HOH 184 421 187 HOH HOH A . E 4 HOH 185 422 188 HOH HOH A . E 4 HOH 186 423 189 HOH HOH A . E 4 HOH 187 424 190 HOH HOH A . E 4 HOH 188 425 191 HOH HOH A . E 4 HOH 189 426 192 HOH HOH A . E 4 HOH 190 427 193 HOH HOH A . E 4 HOH 191 428 194 HOH HOH A . E 4 HOH 192 429 195 HOH HOH A . E 4 HOH 193 430 196 HOH HOH A . E 4 HOH 194 431 197 HOH HOH A . E 4 HOH 195 432 198 HOH HOH A . E 4 HOH 196 433 199 HOH HOH A . E 4 HOH 197 434 200 HOH HOH A . E 4 HOH 198 435 201 HOH HOH A . E 4 HOH 199 436 202 HOH HOH A . E 4 HOH 200 437 203 HOH HOH A . E 4 HOH 201 438 204 HOH HOH A . E 4 HOH 202 439 205 HOH HOH A . E 4 HOH 203 440 206 HOH HOH A . E 4 HOH 204 441 207 HOH HOH A . E 4 HOH 205 442 208 HOH HOH A . E 4 HOH 206 443 209 HOH HOH A . E 4 HOH 207 444 210 HOH HOH A . E 4 HOH 208 445 211 HOH HOH A . E 4 HOH 209 446 212 HOH HOH A . E 4 HOH 210 447 213 HOH HOH A . E 4 HOH 211 448 214 HOH HOH A . E 4 HOH 212 449 215 HOH HOH A . E 4 HOH 213 450 216 HOH HOH A . E 4 HOH 214 451 217 HOH HOH A . E 4 HOH 215 452 218 HOH HOH A . E 4 HOH 216 453 219 HOH HOH A . E 4 HOH 217 454 220 HOH HOH A . E 4 HOH 218 455 221 HOH HOH A . E 4 HOH 219 456 222 HOH HOH A . E 4 HOH 220 457 223 HOH HOH A . E 4 HOH 221 458 224 HOH HOH A . E 4 HOH 222 459 225 HOH HOH A . E 4 HOH 223 460 226 HOH HOH A . E 4 HOH 224 461 227 HOH HOH A . E 4 HOH 225 462 228 HOH HOH A . E 4 HOH 226 463 229 HOH HOH A . E 4 HOH 227 464 230 HOH HOH A . E 4 HOH 228 465 231 HOH HOH A . E 4 HOH 229 466 232 HOH HOH A . E 4 HOH 230 467 233 HOH HOH A . E 4 HOH 231 468 234 HOH HOH A . E 4 HOH 232 469 235 HOH HOH A . E 4 HOH 233 470 236 HOH HOH A . E 4 HOH 234 471 237 HOH HOH A . E 4 HOH 235 472 238 HOH HOH A . E 4 HOH 236 473 239 HOH HOH A . E 4 HOH 237 474 240 HOH HOH A . E 4 HOH 238 475 241 HOH HOH A . E 4 HOH 239 476 242 HOH HOH A . E 4 HOH 240 477 243 HOH HOH A . E 4 HOH 241 478 244 HOH HOH A . E 4 HOH 242 479 245 HOH HOH A . E 4 HOH 243 480 246 HOH HOH A . E 4 HOH 244 481 247 HOH HOH A . E 4 HOH 245 482 248 HOH HOH A . E 4 HOH 246 483 249 HOH HOH A . E 4 HOH 247 484 250 HOH HOH A . E 4 HOH 248 485 251 HOH HOH A . E 4 HOH 249 486 252 HOH HOH A . E 4 HOH 250 487 253 HOH HOH A . E 4 HOH 251 488 254 HOH HOH A . E 4 HOH 252 489 255 HOH HOH A . E 4 HOH 253 490 256 HOH HOH A . E 4 HOH 254 491 257 HOH HOH A . E 4 HOH 255 492 258 HOH HOH A . E 4 HOH 256 493 259 HOH HOH A . E 4 HOH 257 494 260 HOH HOH A . E 4 HOH 258 495 261 HOH HOH A . E 4 HOH 259 496 262 HOH HOH A . E 4 HOH 260 497 263 HOH HOH A . E 4 HOH 261 498 264 HOH HOH A . E 4 HOH 262 499 265 HOH HOH A . E 4 HOH 263 500 266 HOH HOH A . E 4 HOH 264 501 267 HOH HOH A . E 4 HOH 265 502 268 HOH HOH A . E 4 HOH 266 503 269 HOH HOH A . E 4 HOH 267 504 270 HOH HOH A . E 4 HOH 268 505 271 HOH HOH A . E 4 HOH 269 506 272 HOH HOH A . E 4 HOH 270 507 273 HOH HOH A . E 4 HOH 271 508 274 HOH HOH A . E 4 HOH 272 509 275 HOH HOH A . E 4 HOH 273 510 276 HOH HOH A . E 4 HOH 274 511 277 HOH HOH A . E 4 HOH 275 512 278 HOH HOH A . E 4 HOH 276 513 279 HOH HOH A . E 4 HOH 277 514 280 HOH HOH A . E 4 HOH 278 515 281 HOH HOH A . E 4 HOH 279 516 282 HOH HOH A . E 4 HOH 280 517 283 HOH HOH A . E 4 HOH 281 518 284 HOH HOH A . E 4 HOH 282 519 285 HOH HOH A . E 4 HOH 283 520 286 HOH HOH A . E 4 HOH 284 521 287 HOH HOH A . E 4 HOH 285 522 288 HOH HOH A . E 4 HOH 286 523 289 HOH HOH A . E 4 HOH 287 524 290 HOH HOH A . E 4 HOH 288 525 291 HOH HOH A . E 4 HOH 289 526 292 HOH HOH A . E 4 HOH 290 527 293 HOH HOH A . E 4 HOH 291 528 294 HOH HOH A . E 4 HOH 292 529 295 HOH HOH A . E 4 HOH 293 530 296 HOH HOH A . E 4 HOH 294 531 297 HOH HOH A . E 4 HOH 295 532 298 HOH HOH A . E 4 HOH 296 533 299 HOH HOH A . E 4 HOH 297 534 300 HOH HOH A . E 4 HOH 298 535 301 HOH HOH A . E 4 HOH 299 536 302 HOH HOH A . E 4 HOH 300 537 303 HOH HOH A . E 4 HOH 301 538 304 HOH HOH A . E 4 HOH 302 539 305 HOH HOH A . E 4 HOH 303 540 306 HOH HOH A . E 4 HOH 304 541 307 HOH HOH A . E 4 HOH 305 542 308 HOH HOH A . E 4 HOH 306 543 309 HOH HOH A . E 4 HOH 307 544 310 HOH HOH A . E 4 HOH 308 545 311 HOH HOH A . E 4 HOH 309 546 312 HOH HOH A . E 4 HOH 310 547 313 HOH HOH A . E 4 HOH 311 548 314 HOH HOH A . E 4 HOH 312 549 315 HOH HOH A . E 4 HOH 313 550 316 HOH HOH A . E 4 HOH 314 551 317 HOH HOH A . E 4 HOH 315 552 318 HOH HOH A . E 4 HOH 316 553 319 HOH HOH A . E 4 HOH 317 554 320 HOH HOH A . E 4 HOH 318 555 321 HOH HOH A . E 4 HOH 319 556 322 HOH HOH A . E 4 HOH 320 557 323 HOH HOH A . E 4 HOH 321 558 324 HOH HOH A . E 4 HOH 322 559 325 HOH HOH A . E 4 HOH 323 560 326 HOH HOH A . E 4 HOH 324 561 327 HOH HOH A . E 4 HOH 325 562 328 HOH HOH A . E 4 HOH 326 563 329 HOH HOH A . E 4 HOH 327 564 330 HOH HOH A . E 4 HOH 328 565 331 HOH HOH A . E 4 HOH 329 566 332 HOH HOH A . E 4 HOH 330 567 333 HOH HOH A . E 4 HOH 331 568 334 HOH HOH A . E 4 HOH 332 569 335 HOH HOH A . E 4 HOH 333 570 336 HOH HOH A . E 4 HOH 334 571 337 HOH HOH A . E 4 HOH 335 572 338 HOH HOH A . E 4 HOH 336 573 339 HOH HOH A . E 4 HOH 337 574 340 HOH HOH A . E 4 HOH 338 575 341 HOH HOH A . E 4 HOH 339 576 342 HOH HOH A . E 4 HOH 340 577 343 HOH HOH A . E 4 HOH 341 578 344 HOH HOH A . E 4 HOH 342 579 345 HOH HOH A . E 4 HOH 343 580 346 HOH HOH A . E 4 HOH 344 581 347 HOH HOH A . E 4 HOH 345 582 348 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 109 A MSE 108 ? MET SELENOMETHIONINE 2 A MSE 131 A MSE 130 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-08-08 2 'Structure model' 1 1 2008-04-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2023-01-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Source and taxonomy' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' database_2 3 5 'Structure model' struct_conn 4 5 'Structure model' struct_ref_seq_dif 5 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' 3 5 'Structure model' '_database_2.pdbx_DOI' 4 5 'Structure model' '_database_2.pdbx_database_accession' 5 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 5 'Structure model' '_struct_ref_seq_dif.details' 7 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 8 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 9 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 1 REFMAC 5.2.0019 ? ? 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 2 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/xscale_program.html ? ? 3 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 4 XDS . ? ? ? ? 'data reduction' ? ? ? 5 SHELX . ? ? ? ? phasing ? ? ? 6 autoSHARP . ? ? ? ? phasing ? ? ? 7 # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;SEQUENCE THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OE2 A GLU 206 ? B NE2 A GLN 217 ? ? 1.78 2 1 OE1 A GLN 105 ? B O A HOH 391 ? ? 1.89 3 1 O A GLY 71 ? A O A HOH 420 ? ? 1.93 4 1 OD1 A ASP 158 ? B O A HOH 377 ? ? 2.05 5 1 O A HOH 570 ? ? O A HOH 571 ? ? 2.15 6 1 O A HOH 336 ? ? O A HOH 452 ? ? 2.18 7 1 OE1 A GLU 149 ? B O A HOH 271 ? ? 2.19 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 OE2 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 GLU _pdbx_validate_symm_contact.auth_seq_id_1 206 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 B _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 ARG _pdbx_validate_symm_contact.auth_seq_id_2 233 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 4_455 _pdbx_validate_symm_contact.dist 2.15 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CD A LYS 192 ? ? CE A LYS 192 ? ? NZ A LYS 192 ? ? 127.51 111.70 15.81 2.30 N 2 1 NE A ARG 220 ? A CZ A ARG 220 ? A NH1 A ARG 220 ? A 116.64 120.30 -3.66 0.50 N 3 1 NE A ARG 220 ? B CZ A ARG 220 ? B NH1 A ARG 220 ? B 124.42 120.30 4.12 0.50 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id THR _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 119 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -136.60 _pdbx_validate_torsion.psi -32.26 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A SER 14 ? N ? A SER 15 N 2 1 Y 1 A SER 14 ? CA ? A SER 15 CA 3 1 Y 1 A SER 14 ? CB ? A SER 15 CB 4 1 Y 1 A SER 14 ? OG ? A SER 15 OG 5 1 Y 1 A LYS 77 ? NZ ? A LYS 78 NZ 6 1 Y 1 A LYS 94 ? CE ? A LYS 95 CE 7 1 Y 1 A LYS 94 ? NZ ? A LYS 95 NZ 8 1 Y 1 A LYS 95 ? NZ ? A LYS 96 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A MSE 1 ? A MSE 2 3 1 Y 1 A LEU 2 ? A LEU 3 4 1 Y 1 A SER 3 ? A SER 4 5 1 Y 1 A ASN 4 ? A ASN 5 6 1 Y 1 A LEU 5 ? A LEU 6 7 1 Y 1 A GLU 6 ? A GLU 7 8 1 Y 1 A SER 7 ? A SER 8 9 1 Y 1 A SER 8 ? A SER 9 10 1 Y 1 A ILE 9 ? A ILE 10 11 1 Y 1 A GLN 10 ? A GLN 11 12 1 Y 1 A SER 11 ? A SER 12 13 1 Y 1 A PRO 12 ? A PRO 13 14 1 Y 1 A LYS 13 ? A LYS 14 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ACETATE ION' ACT 3 'UNKNOWN LIGAND' UNL 4 water HOH #