data_2HEI # _entry.id 2HEI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2HEI pdb_00002hei 10.2210/pdb2hei/pdb RCSB RCSB038255 ? ? WWPDB D_1000038255 ? ? # _pdbx_database_status.entry_id 2HEI _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2006-06-21 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hong, B.' 1 'Shen, L.' 2 'Wang, J.' 3 'Tempel, W.' 4 'Landry, R.' 5 'Arrowsmith, C.H.' 6 'Edwards, A.M.' 7 'Sundstrom, M.' 8 'Weigelt, J.' 9 'Bochkarev, A.' 10 'Park, H.' 11 'Structural Genomics Consortium (SGC)' 12 # _citation.id primary _citation.title 'Crystal structure of human RAB5B in complex with GDP' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hong, B.' 1 ? primary 'Shen, L.' 2 ? primary 'Wang, J.' 3 ? primary 'Tempel, W.' 4 ? primary 'Landry, R.' 5 ? primary 'Arrowsmith, C.H.' 6 ? primary 'Edwards, A.M.' 7 ? primary 'Sundstrom, M.' 8 ? primary 'Weigelt, J.' 9 ? primary 'Bochkarev, A.' 10 ? primary 'Park, H.' 11 ? # _cell.entry_id 2HEI _cell.length_a 41.302 _cell.length_b 78.370 _cell.length_c 95.501 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2HEI _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ras-related protein Rab-5B' 19773.455 2 ? ? ? ? 2 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 2 ? ? ? ? 3 non-polymer syn '(4S,5S)-1,2-DITHIANE-4,5-DIOL' 152.235 2 ? ? ? ? 4 water nat water 18.015 124 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRG AQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVND LFLAIAKKLPKSEPQNLGG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRG AQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVND LFLAIAKKLPKSEPQNLGG ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 ALA n 1 4 SER n 1 5 LYS n 1 6 ILE n 1 7 CYS n 1 8 GLN n 1 9 PHE n 1 10 LYS n 1 11 LEU n 1 12 VAL n 1 13 LEU n 1 14 LEU n 1 15 GLY n 1 16 GLU n 1 17 SER n 1 18 ALA n 1 19 VAL n 1 20 GLY n 1 21 LYS n 1 22 SER n 1 23 SER n 1 24 LEU n 1 25 VAL n 1 26 LEU n 1 27 ARG n 1 28 PHE n 1 29 VAL n 1 30 LYS n 1 31 GLY n 1 32 GLN n 1 33 PHE n 1 34 HIS n 1 35 GLU n 1 36 TYR n 1 37 GLN n 1 38 GLU n 1 39 SER n 1 40 THR n 1 41 ILE n 1 42 GLY n 1 43 ALA n 1 44 ALA n 1 45 PHE n 1 46 LEU n 1 47 THR n 1 48 GLN n 1 49 SER n 1 50 VAL n 1 51 CYS n 1 52 LEU n 1 53 ASP n 1 54 ASP n 1 55 THR n 1 56 THR n 1 57 VAL n 1 58 LYS n 1 59 PHE n 1 60 GLU n 1 61 ILE n 1 62 TRP n 1 63 ASP n 1 64 THR n 1 65 ALA n 1 66 GLY n 1 67 GLN n 1 68 GLU n 1 69 ARG n 1 70 TYR n 1 71 HIS n 1 72 SER n 1 73 LEU n 1 74 ALA n 1 75 PRO n 1 76 MET n 1 77 TYR n 1 78 TYR n 1 79 ARG n 1 80 GLY n 1 81 ALA n 1 82 GLN n 1 83 ALA n 1 84 ALA n 1 85 ILE n 1 86 VAL n 1 87 VAL n 1 88 TYR n 1 89 ASP n 1 90 ILE n 1 91 THR n 1 92 ASN n 1 93 GLN n 1 94 GLU n 1 95 THR n 1 96 PHE n 1 97 ALA n 1 98 ARG n 1 99 ALA n 1 100 LYS n 1 101 THR n 1 102 TRP n 1 103 VAL n 1 104 LYS n 1 105 GLU n 1 106 LEU n 1 107 GLN n 1 108 ARG n 1 109 GLN n 1 110 ALA n 1 111 SER n 1 112 PRO n 1 113 SER n 1 114 ILE n 1 115 VAL n 1 116 ILE n 1 117 ALA n 1 118 LEU n 1 119 ALA n 1 120 GLY n 1 121 ASN n 1 122 LYS n 1 123 ALA n 1 124 ASP n 1 125 LEU n 1 126 ALA n 1 127 ASN n 1 128 LYS n 1 129 ARG n 1 130 MET n 1 131 VAL n 1 132 GLU n 1 133 TYR n 1 134 GLU n 1 135 GLU n 1 136 ALA n 1 137 GLN n 1 138 ALA n 1 139 TYR n 1 140 ALA n 1 141 ASP n 1 142 ASP n 1 143 ASN n 1 144 SER n 1 145 LEU n 1 146 LEU n 1 147 PHE n 1 148 MET n 1 149 GLU n 1 150 THR n 1 151 SER n 1 152 ALA n 1 153 LYS n 1 154 THR n 1 155 ALA n 1 156 MET n 1 157 ASN n 1 158 VAL n 1 159 ASN n 1 160 ASP n 1 161 LEU n 1 162 PHE n 1 163 LEU n 1 164 ALA n 1 165 ILE n 1 166 ALA n 1 167 LYS n 1 168 LYS n 1 169 LEU n 1 170 PRO n 1 171 LYS n 1 172 SER n 1 173 GLU n 1 174 PRO n 1 175 GLN n 1 176 ASN n 1 177 LEU n 1 178 GLY n 1 179 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene RAB5B _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21-CodonPlus (DE-3)-RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name p28a-LIC _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RAB5B_HUMAN _struct_ref.pdbx_db_accession P61020 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 15 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2HEI A 3 ? 179 ? P61020 15 ? 191 ? 15 191 2 1 2HEI B 3 ? 179 ? P61020 15 ? 191 ? 15 191 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2HEI GLY A 1 ? UNP P61020 ? ? 'cloning artifact' 13 1 1 2HEI SER A 2 ? UNP P61020 ? ? 'cloning artifact' 14 2 2 2HEI GLY B 1 ? UNP P61020 ? ? 'cloning artifact' 13 3 2 2HEI SER B 2 ? UNP P61020 ? ? 'cloning artifact' 14 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 D1D non-polymer . '(4S,5S)-1,2-DITHIANE-4,5-DIOL' ? 'C4 H8 O2 S2' 152.235 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 2HEI # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 37.04 _exptl_crystal.density_Matthews 2.1 _exptl_crystal.density_meas ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.temp 291 _exptl_crystal_grow.pdbx_details '25% P3350, 0.1M NaOAc, pH 4.5, vapor diffusion, sitting drop, temperature 291K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2006-05-07 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.918 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'CHESS BEAMLINE F1' _diffrn_source.pdbx_wavelength_list ? _diffrn_source.pdbx_wavelength 0.918 _diffrn_source.pdbx_synchrotron_site CHESS _diffrn_source.pdbx_synchrotron_beamline F1 # _reflns.entry_id 2HEI _reflns.d_resolution_high 1.500 _reflns.d_resolution_low 50 _reflns.number_obs 50161 _reflns.pdbx_Rmerge_I_obs 0.058 _reflns.pdbx_netI_over_sigmaI 9.200 _reflns.pdbx_chi_squared 1.036 _reflns.pdbx_redundancy 7.000 _reflns.percent_possible_obs 100.000 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 1.50 1.55 ? ? 4938 0.679 ? ? 0.834 6.70 100.00 ? ? ? 1 1.55 1.62 ? ? 4930 0.478 ? ? 0.847 6.80 100.00 ? ? ? 2 1.62 1.69 ? ? 4962 0.354 ? ? 0.847 6.90 100.00 ? ? ? 3 1.69 1.78 ? ? 4963 0.239 ? ? 0.887 7.00 100.00 ? ? ? 4 1.78 1.89 ? ? 4951 0.159 ? ? 0.950 7.00 100.00 ? ? ? 5 1.89 2.04 ? ? 4990 0.102 ? ? 1.013 7.10 100.00 ? ? ? 6 2.04 2.24 ? ? 5014 0.072 ? ? 1.101 7.20 100.00 ? ? ? 7 2.24 2.56 ? ? 5036 0.057 ? ? 1.200 7.20 100.00 ? ? ? 8 2.56 3.23 ? ? 5074 0.045 ? ? 1.230 7.20 100.00 ? ? ? 9 3.23 50.00 ? ? 5303 0.037 ? ? 1.398 6.70 99.60 ? ? ? 10 # _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.B_iso_mean 15.121 _refine.aniso_B[1][1] -0.375 _refine.aniso_B[2][2] 0.517 _refine.aniso_B[3][3] -0.143 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_d_res_high 1.550 _refine.ls_d_res_low 30.000 _refine.ls_number_reflns_R_free 2875 _refine.ls_number_reflns_obs 45443 _refine.ls_R_factor_R_work 0.2622 _refine.ls_R_factor_R_free 0.2936 _refine.ls_R_factor_all 0.264 _refine.ls_wR_factor_R_work 0.276 _refine.ls_wR_factor_R_free 0.319 _refine.ls_percent_reflns_obs 99.184 _refine.ls_percent_reflns_R_free 6.327 _refine.correlation_coeff_Fo_to_Fc 0.950 _refine.correlation_coeff_Fo_to_Fc_free 0.934 _refine.pdbx_overall_ESU_R 0.123 _refine.pdbx_overall_ESU_R_Free 0.119 _refine.overall_SU_ML 0.075 _refine.overall_SU_B 2.000 _refine.entry_id 2HEI _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB ENTRY 1N6I' _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details 'thin shells' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2568 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 72 _refine_hist.number_atoms_solvent 124 _refine_hist.number_atoms_total 2764 _refine_hist.d_res_high 1.550 _refine_hist.d_res_low 30.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 2690 0.018 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1770 0.003 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 3649 1.488 1.985 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 4336 1.139 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 328 6.085 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 112 34.633 24.821 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 463 12.151 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 10 14.429 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 421 0.108 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 2910 0.005 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 536 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 498 0.210 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 1876 0.194 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 1282 0.180 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 1307 0.086 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 128 0.131 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 26 0.229 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 62 0.269 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 10 0.106 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1809 2.432 2.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 664 0.687 2.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2615 2.907 3.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 1205 2.466 2.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 1032 3.232 3.000 ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_low _refine_ls_shell.d_res_high _refine_ls_shell.number_reflns_all _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free _refine_ls_shell.number_reflns_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 20 1.590 1.550 3336 99.850 3331 0.296 0.296 0 . . . . . 'X-RAY DIFFRACTION' 20 1.634 1.590 3241 99.784 2777 0.286 0.293 457 0.342 . . . . 'X-RAY DIFFRACTION' 20 1.681 1.634 3143 99.682 3133 0.287 0.287 0 . . . . . 'X-RAY DIFFRACTION' 20 1.732 1.681 3096 99.548 2671 0.274 0.279 411 0.31 . . . . 'X-RAY DIFFRACTION' 20 1.789 1.732 2978 99.328 2958 0.269 0.269 0 . . . . . 'X-RAY DIFFRACTION' 20 1.852 1.789 2869 98.919 2469 0.264 0.267 369 0.285 . . . . 'X-RAY DIFFRACTION' 20 1.921 1.852 2799 98.535 2758 0.272 0.272 0 . . . . . 'X-RAY DIFFRACTION' 20 1.999 1.921 2696 98.516 2343 0.256 0.262 313 0.312 . . . . 'X-RAY DIFFRACTION' 20 2.088 1.999 2580 98.837 2550 0.253 0.253 0 . . . . . 'X-RAY DIFFRACTION' 20 2.189 2.088 2493 99.118 2180 0.251 0.256 291 0.288 . . . . 'X-RAY DIFFRACTION' 20 2.307 2.189 2350 98.681 2202 0.249 0.249 117 0.238 . . . . 'X-RAY DIFFRACTION' 20 2.446 2.307 2258 98.893 2131 0.253 0.253 102 0.263 . . . . 'X-RAY DIFFRACTION' 20 2.614 2.446 2120 98.774 1900 0.256 0.256 194 0.26 . . . . 'X-RAY DIFFRACTION' 20 2.821 2.614 1954 99.079 1764 0.27 0.274 172 0.308 . . . . 'X-RAY DIFFRACTION' 20 3.088 2.821 1832 98.854 1811 0.273 0.273 0 . . . . . 'X-RAY DIFFRACTION' 20 3.448 3.088 1673 99.821 1534 0.261 0.267 136 0.34 . . . . 'X-RAY DIFFRACTION' 20 3.972 3.448 1474 99.661 1364 0.256 0.255 105 0.234 . . . . 'X-RAY DIFFRACTION' 20 4.844 3.972 1270 99.606 1160 0.242 0.243 105 0.264 . . . . 'X-RAY DIFFRACTION' 20 6.762 4.844 1024 99.707 964 0.269 0.272 57 0.323 . . . . 'X-RAY DIFFRACTION' 20 30.000 6.762 631 97.306 568 0.281 0.293 46 0.455 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 2HEI _struct.title 'Crystal structure of human RAB5B in complex with GDP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text 'G-PROTEIN, RAB, Structural Genomics, Structural Genomics Consortium, SGC, TRANSPORT PROTEIN' _struct_keywords.entry_id 2HEI _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 4 ? # _struct_biol.id 1 _struct_biol.details 'not known' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 20 ? GLY A 31 ? GLY A 32 GLY A 43 1 ? 12 HELX_P HELX_P2 2 TYR A 70 ? SER A 72 ? TYR A 82 SER A 84 5 ? 3 HELX_P HELX_P3 3 LEU A 73 ? ARG A 79 ? LEU A 85 ARG A 91 1 ? 7 HELX_P HELX_P4 4 ASN A 92 ? ALA A 110 ? ASN A 104 ALA A 122 1 ? 19 HELX_P HELX_P5 5 LYS A 122 ? ARG A 129 ? LYS A 134 ARG A 141 5 ? 8 HELX_P HELX_P6 6 GLU A 132 ? ASN A 143 ? GLU A 144 ASN A 155 1 ? 12 HELX_P HELX_P7 7 ASN A 157 ? LEU A 169 ? ASN A 169 LEU A 181 1 ? 13 HELX_P HELX_P8 8 GLY B 20 ? GLY B 31 ? GLY B 32 GLY B 43 1 ? 12 HELX_P HELX_P9 9 TYR B 70 ? SER B 72 ? TYR B 82 SER B 84 5 ? 3 HELX_P HELX_P10 10 LEU B 73 ? ARG B 79 ? LEU B 85 ARG B 91 1 ? 7 HELX_P HELX_P11 11 ASN B 92 ? ALA B 110 ? ASN B 104 ALA B 122 1 ? 19 HELX_P HELX_P12 12 LYS B 122 ? ARG B 129 ? LYS B 134 ARG B 141 5 ? 8 HELX_P HELX_P13 13 GLU B 132 ? ASN B 143 ? GLU B 144 ASN B 155 1 ? 12 HELX_P HELX_P14 14 ASN B 157 ? LEU B 169 ? ASN B 169 LEU B 181 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 46 ? VAL A 50 ? LEU A 58 VAL A 62 A 2 VAL A 57 ? TRP A 62 ? VAL A 69 TRP A 74 A 3 CYS A 7 ? LEU A 14 ? CYS A 19 LEU A 26 A 4 ALA A 83 ? ASP A 89 ? ALA A 95 ASP A 101 A 5 VAL A 115 ? ASN A 121 ? VAL A 127 ASN A 133 A 6 LEU A 146 ? GLU A 149 ? LEU A 158 GLU A 161 B 1 LEU B 46 ? VAL B 50 ? LEU B 58 VAL B 62 B 2 THR B 56 ? ASP B 63 ? THR B 68 ASP B 75 B 3 ILE B 6 ? LEU B 14 ? ILE B 18 LEU B 26 B 4 ALA B 83 ? ASP B 89 ? ALA B 95 ASP B 101 B 5 VAL B 115 ? ASN B 121 ? VAL B 127 ASN B 133 B 6 LEU B 146 ? GLU B 149 ? LEU B 158 GLU B 161 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 46 ? N LEU A 58 O ILE A 61 ? O ILE A 73 A 2 3 O LYS A 58 ? O LYS A 70 N CYS A 7 ? N CYS A 19 A 3 4 N LEU A 14 ? N LEU A 26 O ILE A 85 ? O ILE A 97 A 4 5 N VAL A 86 ? N VAL A 98 O ALA A 117 ? O ALA A 129 A 5 6 N LEU A 118 ? N LEU A 130 O LEU A 146 ? O LEU A 158 B 1 2 N VAL B 50 ? N VAL B 62 O VAL B 57 ? O VAL B 69 B 2 3 O LYS B 58 ? O LYS B 70 N PHE B 9 ? N PHE B 21 B 3 4 N LEU B 14 ? N LEU B 26 O VAL B 87 ? O VAL B 99 B 4 5 N TYR B 88 ? N TYR B 100 O ASN B 121 ? O ASN B 133 B 5 6 N LEU B 118 ? N LEU B 130 O LEU B 146 ? O LEU B 158 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GDP 201 ? 22 'BINDING SITE FOR RESIDUE GDP A 201' AC2 Software A D1D 202 ? 9 'BINDING SITE FOR RESIDUE D1D A 202' AC3 Software B GDP 301 ? 23 'BINDING SITE FOR RESIDUE GDP B 301' AC4 Software B D1D 302 ? 8 'BINDING SITE FOR RESIDUE D1D B 302' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 22 ALA A 18 ? ALA A 30 . ? 1_555 ? 2 AC1 22 VAL A 19 ? VAL A 31 . ? 1_555 ? 3 AC1 22 GLY A 20 ? GLY A 32 . ? 1_555 ? 4 AC1 22 LYS A 21 ? LYS A 33 . ? 1_555 ? 5 AC1 22 SER A 22 ? SER A 34 . ? 1_555 ? 6 AC1 22 SER A 23 ? SER A 35 . ? 1_555 ? 7 AC1 22 PHE A 33 ? PHE A 45 . ? 1_555 ? 8 AC1 22 GLU A 35 ? GLU A 47 . ? 1_555 ? 9 AC1 22 TYR A 36 ? TYR A 48 . ? 1_555 ? 10 AC1 22 SER A 39 ? SER A 51 . ? 1_555 ? 11 AC1 22 ALA A 65 ? ALA A 77 . ? 1_555 ? 12 AC1 22 ASN A 121 ? ASN A 133 . ? 1_555 ? 13 AC1 22 LYS A 122 ? LYS A 134 . ? 1_555 ? 14 AC1 22 ASP A 124 ? ASP A 136 . ? 1_555 ? 15 AC1 22 LEU A 125 ? LEU A 137 . ? 1_555 ? 16 AC1 22 SER A 151 ? SER A 163 . ? 1_555 ? 17 AC1 22 ALA A 152 ? ALA A 164 . ? 1_555 ? 18 AC1 22 LYS A 153 ? LYS A 165 . ? 1_555 ? 19 AC1 22 HOH G . ? HOH A 221 . ? 1_555 ? 20 AC1 22 HOH G . ? HOH A 223 . ? 1_555 ? 21 AC1 22 HOH G . ? HOH A 244 . ? 1_555 ? 22 AC1 22 HOH G . ? HOH A 266 . ? 1_555 ? 23 AC2 9 THR A 64 ? THR A 76 . ? 1_555 ? 24 AC2 9 GLN A 67 ? GLN A 79 . ? 1_555 ? 25 AC2 9 GLU A 68 ? GLU A 80 . ? 1_555 ? 26 AC2 9 HIS A 71 ? HIS A 83 . ? 1_555 ? 27 AC2 9 ALA A 74 ? ALA A 86 . ? 1_555 ? 28 AC2 9 TYR A 77 ? TYR A 89 . ? 1_555 ? 29 AC2 9 TYR A 78 ? TYR A 90 . ? 1_555 ? 30 AC2 9 TRP A 102 ? TRP A 114 . ? 1_555 ? 31 AC2 9 GLU A 105 ? GLU A 117 . ? 1_555 ? 32 AC3 23 ALA B 18 ? ALA B 30 . ? 1_555 ? 33 AC3 23 VAL B 19 ? VAL B 31 . ? 1_555 ? 34 AC3 23 GLY B 20 ? GLY B 32 . ? 1_555 ? 35 AC3 23 LYS B 21 ? LYS B 33 . ? 1_555 ? 36 AC3 23 SER B 22 ? SER B 34 . ? 1_555 ? 37 AC3 23 SER B 23 ? SER B 35 . ? 1_555 ? 38 AC3 23 PHE B 33 ? PHE B 45 . ? 1_555 ? 39 AC3 23 GLU B 35 ? GLU B 47 . ? 1_555 ? 40 AC3 23 TYR B 36 ? TYR B 48 . ? 1_555 ? 41 AC3 23 SER B 39 ? SER B 51 . ? 1_555 ? 42 AC3 23 ALA B 65 ? ALA B 77 . ? 1_555 ? 43 AC3 23 ASN B 121 ? ASN B 133 . ? 1_555 ? 44 AC3 23 LYS B 122 ? LYS B 134 . ? 1_555 ? 45 AC3 23 ASP B 124 ? ASP B 136 . ? 1_555 ? 46 AC3 23 LEU B 125 ? LEU B 137 . ? 1_555 ? 47 AC3 23 SER B 151 ? SER B 163 . ? 1_555 ? 48 AC3 23 ALA B 152 ? ALA B 164 . ? 1_555 ? 49 AC3 23 LYS B 153 ? LYS B 165 . ? 1_555 ? 50 AC3 23 HOH H . ? HOH B 310 . ? 1_555 ? 51 AC3 23 HOH H . ? HOH B 315 . ? 1_555 ? 52 AC3 23 HOH H . ? HOH B 338 . ? 1_555 ? 53 AC3 23 HOH H . ? HOH B 360 . ? 1_555 ? 54 AC3 23 HOH H . ? HOH B 361 . ? 1_555 ? 55 AC4 8 THR B 64 ? THR B 76 . ? 1_555 ? 56 AC4 8 GLN B 67 ? GLN B 79 . ? 1_555 ? 57 AC4 8 GLU B 68 ? GLU B 80 . ? 1_555 ? 58 AC4 8 HIS B 71 ? HIS B 83 . ? 1_555 ? 59 AC4 8 ALA B 74 ? ALA B 86 . ? 1_555 ? 60 AC4 8 TYR B 77 ? TYR B 89 . ? 1_555 ? 61 AC4 8 TRP B 102 ? TRP B 114 . ? 1_555 ? 62 AC4 8 GLU B 105 ? GLU B 117 . ? 1_555 ? # _atom_sites.entry_id 2HEI _atom_sites.fract_transf_matrix[1][1] 0.024212 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012760 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010471 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 13 ? ? ? A . n A 1 2 SER 2 14 ? ? ? A . n A 1 3 ALA 3 15 ? ? ? A . n A 1 4 SER 4 16 ? ? ? A . n A 1 5 LYS 5 17 ? ? ? A . n A 1 6 ILE 6 18 18 ILE ILE A . n A 1 7 CYS 7 19 19 CYS CYS A . n A 1 8 GLN 8 20 20 GLN GLN A . n A 1 9 PHE 9 21 21 PHE PHE A . n A 1 10 LYS 10 22 22 LYS LYS A . n A 1 11 LEU 11 23 23 LEU LEU A . n A 1 12 VAL 12 24 24 VAL VAL A . n A 1 13 LEU 13 25 25 LEU LEU A . n A 1 14 LEU 14 26 26 LEU LEU A . n A 1 15 GLY 15 27 27 GLY GLY A . n A 1 16 GLU 16 28 28 GLU GLU A . n A 1 17 SER 17 29 29 SER SER A . n A 1 18 ALA 18 30 30 ALA ALA A . n A 1 19 VAL 19 31 31 VAL VAL A . n A 1 20 GLY 20 32 32 GLY GLY A . n A 1 21 LYS 21 33 33 LYS LYS A . n A 1 22 SER 22 34 34 SER SER A . n A 1 23 SER 23 35 35 SER SER A . n A 1 24 LEU 24 36 36 LEU LEU A . n A 1 25 VAL 25 37 37 VAL VAL A . n A 1 26 LEU 26 38 38 LEU LEU A . n A 1 27 ARG 27 39 39 ARG ARG A . n A 1 28 PHE 28 40 40 PHE PHE A . n A 1 29 VAL 29 41 41 VAL VAL A . n A 1 30 LYS 30 42 42 LYS LYS A . n A 1 31 GLY 31 43 43 GLY GLY A . n A 1 32 GLN 32 44 44 GLN GLN A . n A 1 33 PHE 33 45 45 PHE PHE A . n A 1 34 HIS 34 46 46 HIS HIS A . n A 1 35 GLU 35 47 47 GLU GLU A . n A 1 36 TYR 36 48 48 TYR TYR A . n A 1 37 GLN 37 49 49 GLN GLN A . n A 1 38 GLU 38 50 50 GLU GLU A . n A 1 39 SER 39 51 51 SER SER A . n A 1 40 THR 40 52 52 THR THR A . n A 1 41 ILE 41 53 53 ILE ILE A . n A 1 42 GLY 42 54 54 GLY GLY A . n A 1 43 ALA 43 55 55 ALA ALA A . n A 1 44 ALA 44 56 56 ALA ALA A . n A 1 45 PHE 45 57 57 PHE PHE A . n A 1 46 LEU 46 58 58 LEU LEU A . n A 1 47 THR 47 59 59 THR THR A . n A 1 48 GLN 48 60 60 GLN GLN A . n A 1 49 SER 49 61 61 SER SER A . n A 1 50 VAL 50 62 62 VAL VAL A . n A 1 51 CYS 51 63 63 CYS CYS A . n A 1 52 LEU 52 64 64 LEU LEU A . n A 1 53 ASP 53 65 ? ? ? A . n A 1 54 ASP 54 66 ? ? ? A . n A 1 55 THR 55 67 ? ? ? A . n A 1 56 THR 56 68 68 THR THR A . n A 1 57 VAL 57 69 69 VAL VAL A . n A 1 58 LYS 58 70 70 LYS LYS A . n A 1 59 PHE 59 71 71 PHE PHE A . n A 1 60 GLU 60 72 72 GLU GLU A . n A 1 61 ILE 61 73 73 ILE ILE A . n A 1 62 TRP 62 74 74 TRP TRP A . n A 1 63 ASP 63 75 75 ASP ASP A . n A 1 64 THR 64 76 76 THR THR A . n A 1 65 ALA 65 77 77 ALA ALA A . n A 1 66 GLY 66 78 78 GLY GLY A . n A 1 67 GLN 67 79 79 GLN GLN A . n A 1 68 GLU 68 80 80 GLU GLU A . n A 1 69 ARG 69 81 81 ARG ARG A . n A 1 70 TYR 70 82 82 TYR TYR A . n A 1 71 HIS 71 83 83 HIS HIS A . n A 1 72 SER 72 84 84 SER SER A . n A 1 73 LEU 73 85 85 LEU LEU A . n A 1 74 ALA 74 86 86 ALA ALA A . n A 1 75 PRO 75 87 87 PRO PRO A . n A 1 76 MET 76 88 88 MET MET A . n A 1 77 TYR 77 89 89 TYR TYR A . n A 1 78 TYR 78 90 90 TYR TYR A . n A 1 79 ARG 79 91 91 ARG ARG A . n A 1 80 GLY 80 92 92 GLY GLY A . n A 1 81 ALA 81 93 93 ALA ALA A . n A 1 82 GLN 82 94 94 GLN GLN A . n A 1 83 ALA 83 95 95 ALA ALA A . n A 1 84 ALA 84 96 96 ALA ALA A . n A 1 85 ILE 85 97 97 ILE ILE A . n A 1 86 VAL 86 98 98 VAL VAL A . n A 1 87 VAL 87 99 99 VAL VAL A . n A 1 88 TYR 88 100 100 TYR TYR A . n A 1 89 ASP 89 101 101 ASP ASP A . n A 1 90 ILE 90 102 102 ILE ILE A . n A 1 91 THR 91 103 103 THR THR A . n A 1 92 ASN 92 104 104 ASN ASN A . n A 1 93 GLN 93 105 105 GLN GLN A . n A 1 94 GLU 94 106 106 GLU GLU A . n A 1 95 THR 95 107 107 THR THR A . n A 1 96 PHE 96 108 108 PHE PHE A . n A 1 97 ALA 97 109 109 ALA ALA A . n A 1 98 ARG 98 110 110 ARG ARG A . n A 1 99 ALA 99 111 111 ALA ALA A . n A 1 100 LYS 100 112 112 LYS LYS A . n A 1 101 THR 101 113 113 THR THR A . n A 1 102 TRP 102 114 114 TRP TRP A . n A 1 103 VAL 103 115 115 VAL VAL A . n A 1 104 LYS 104 116 116 LYS LYS A . n A 1 105 GLU 105 117 117 GLU GLU A . n A 1 106 LEU 106 118 118 LEU LEU A . n A 1 107 GLN 107 119 119 GLN GLN A . n A 1 108 ARG 108 120 120 ARG ARG A . n A 1 109 GLN 109 121 121 GLN GLN A . n A 1 110 ALA 110 122 122 ALA ALA A . n A 1 111 SER 111 123 123 SER SER A . n A 1 112 PRO 112 124 124 PRO PRO A . n A 1 113 SER 113 125 125 SER SER A . n A 1 114 ILE 114 126 126 ILE ILE A . n A 1 115 VAL 115 127 127 VAL VAL A . n A 1 116 ILE 116 128 128 ILE ILE A . n A 1 117 ALA 117 129 129 ALA ALA A . n A 1 118 LEU 118 130 130 LEU LEU A . n A 1 119 ALA 119 131 131 ALA ALA A . n A 1 120 GLY 120 132 132 GLY GLY A . n A 1 121 ASN 121 133 133 ASN ASN A . n A 1 122 LYS 122 134 134 LYS LYS A . n A 1 123 ALA 123 135 135 ALA ALA A . n A 1 124 ASP 124 136 136 ASP ASP A . n A 1 125 LEU 125 137 137 LEU LEU A . n A 1 126 ALA 126 138 138 ALA ALA A . n A 1 127 ASN 127 139 139 ASN ASN A . n A 1 128 LYS 128 140 140 LYS LYS A . n A 1 129 ARG 129 141 141 ARG ARG A . n A 1 130 MET 130 142 142 MET MET A . n A 1 131 VAL 131 143 143 VAL VAL A . n A 1 132 GLU 132 144 144 GLU GLU A . n A 1 133 TYR 133 145 145 TYR TYR A . n A 1 134 GLU 134 146 146 GLU GLU A . n A 1 135 GLU 135 147 147 GLU GLU A . n A 1 136 ALA 136 148 148 ALA ALA A . n A 1 137 GLN 137 149 149 GLN GLN A . n A 1 138 ALA 138 150 150 ALA ALA A . n A 1 139 TYR 139 151 151 TYR TYR A . n A 1 140 ALA 140 152 152 ALA ALA A . n A 1 141 ASP 141 153 153 ASP ASP A . n A 1 142 ASP 142 154 154 ASP ASP A . n A 1 143 ASN 143 155 155 ASN ASN A . n A 1 144 SER 144 156 156 SER SER A . n A 1 145 LEU 145 157 157 LEU LEU A . n A 1 146 LEU 146 158 158 LEU LEU A . n A 1 147 PHE 147 159 159 PHE PHE A . n A 1 148 MET 148 160 160 MET MET A . n A 1 149 GLU 149 161 161 GLU GLU A . n A 1 150 THR 150 162 162 THR THR A . n A 1 151 SER 151 163 163 SER SER A . n A 1 152 ALA 152 164 164 ALA ALA A . n A 1 153 LYS 153 165 165 LYS LYS A . n A 1 154 THR 154 166 166 THR THR A . n A 1 155 ALA 155 167 167 ALA ALA A . n A 1 156 MET 156 168 168 MET MET A . n A 1 157 ASN 157 169 169 ASN ASN A . n A 1 158 VAL 158 170 170 VAL VAL A . n A 1 159 ASN 159 171 171 ASN ASN A . n A 1 160 ASP 160 172 172 ASP ASP A . n A 1 161 LEU 161 173 173 LEU LEU A . n A 1 162 PHE 162 174 174 PHE PHE A . n A 1 163 LEU 163 175 175 LEU LEU A . n A 1 164 ALA 164 176 176 ALA ALA A . n A 1 165 ILE 165 177 177 ILE ILE A . n A 1 166 ALA 166 178 178 ALA ALA A . n A 1 167 LYS 167 179 179 LYS LYS A . n A 1 168 LYS 168 180 180 LYS LYS A . n A 1 169 LEU 169 181 181 LEU LEU A . n A 1 170 PRO 170 182 182 PRO PRO A . n A 1 171 LYS 171 183 183 LYS LYS A . n A 1 172 SER 172 184 ? ? ? A . n A 1 173 GLU 173 185 ? ? ? A . n A 1 174 PRO 174 186 ? ? ? A . n A 1 175 GLN 175 187 ? ? ? A . n A 1 176 ASN 176 188 ? ? ? A . n A 1 177 LEU 177 189 ? ? ? A . n A 1 178 GLY 178 190 ? ? ? A . n A 1 179 GLY 179 191 ? ? ? A . n B 1 1 GLY 1 13 ? ? ? B . n B 1 2 SER 2 14 ? ? ? B . n B 1 3 ALA 3 15 ? ? ? B . n B 1 4 SER 4 16 ? ? ? B . n B 1 5 LYS 5 17 17 LYS LYS B . n B 1 6 ILE 6 18 18 ILE ILE B . n B 1 7 CYS 7 19 19 CYS CYS B . n B 1 8 GLN 8 20 20 GLN GLN B . n B 1 9 PHE 9 21 21 PHE PHE B . n B 1 10 LYS 10 22 22 LYS LYS B . n B 1 11 LEU 11 23 23 LEU LEU B . n B 1 12 VAL 12 24 24 VAL VAL B . n B 1 13 LEU 13 25 25 LEU LEU B . n B 1 14 LEU 14 26 26 LEU LEU B . n B 1 15 GLY 15 27 27 GLY GLY B . n B 1 16 GLU 16 28 28 GLU GLU B . n B 1 17 SER 17 29 29 SER SER B . n B 1 18 ALA 18 30 30 ALA ALA B . n B 1 19 VAL 19 31 31 VAL VAL B . n B 1 20 GLY 20 32 32 GLY GLY B . n B 1 21 LYS 21 33 33 LYS LYS B . n B 1 22 SER 22 34 34 SER SER B . n B 1 23 SER 23 35 35 SER SER B . n B 1 24 LEU 24 36 36 LEU LEU B . n B 1 25 VAL 25 37 37 VAL VAL B . n B 1 26 LEU 26 38 38 LEU LEU B . n B 1 27 ARG 27 39 39 ARG ARG B . n B 1 28 PHE 28 40 40 PHE PHE B . n B 1 29 VAL 29 41 41 VAL VAL B . n B 1 30 LYS 30 42 42 LYS LYS B . n B 1 31 GLY 31 43 43 GLY GLY B . n B 1 32 GLN 32 44 44 GLN GLN B . n B 1 33 PHE 33 45 45 PHE PHE B . n B 1 34 HIS 34 46 46 HIS HIS B . n B 1 35 GLU 35 47 47 GLU GLU B . n B 1 36 TYR 36 48 48 TYR TYR B . n B 1 37 GLN 37 49 49 GLN GLN B . n B 1 38 GLU 38 50 50 GLU GLU B . n B 1 39 SER 39 51 51 SER SER B . n B 1 40 THR 40 52 52 THR THR B . n B 1 41 ILE 41 53 53 ILE ILE B . n B 1 42 GLY 42 54 54 GLY GLY B . n B 1 43 ALA 43 55 55 ALA ALA B . n B 1 44 ALA 44 56 56 ALA ALA B . n B 1 45 PHE 45 57 57 PHE PHE B . n B 1 46 LEU 46 58 58 LEU LEU B . n B 1 47 THR 47 59 59 THR THR B . n B 1 48 GLN 48 60 60 GLN GLN B . n B 1 49 SER 49 61 61 SER SER B . n B 1 50 VAL 50 62 62 VAL VAL B . n B 1 51 CYS 51 63 63 CYS CYS B . n B 1 52 LEU 52 64 64 LEU LEU B . n B 1 53 ASP 53 65 ? ? ? B . n B 1 54 ASP 54 66 ? ? ? B . n B 1 55 THR 55 67 67 THR THR B . n B 1 56 THR 56 68 68 THR THR B . n B 1 57 VAL 57 69 69 VAL VAL B . n B 1 58 LYS 58 70 70 LYS LYS B . n B 1 59 PHE 59 71 71 PHE PHE B . n B 1 60 GLU 60 72 72 GLU GLU B . n B 1 61 ILE 61 73 73 ILE ILE B . n B 1 62 TRP 62 74 74 TRP TRP B . n B 1 63 ASP 63 75 75 ASP ASP B . n B 1 64 THR 64 76 76 THR THR B . n B 1 65 ALA 65 77 77 ALA ALA B . n B 1 66 GLY 66 78 78 GLY GLY B . n B 1 67 GLN 67 79 79 GLN GLN B . n B 1 68 GLU 68 80 80 GLU GLU B . n B 1 69 ARG 69 81 81 ARG ARG B . n B 1 70 TYR 70 82 82 TYR TYR B . n B 1 71 HIS 71 83 83 HIS HIS B . n B 1 72 SER 72 84 84 SER SER B . n B 1 73 LEU 73 85 85 LEU LEU B . n B 1 74 ALA 74 86 86 ALA ALA B . n B 1 75 PRO 75 87 87 PRO PRO B . n B 1 76 MET 76 88 88 MET MET B . n B 1 77 TYR 77 89 89 TYR TYR B . n B 1 78 TYR 78 90 90 TYR TYR B . n B 1 79 ARG 79 91 91 ARG ARG B . n B 1 80 GLY 80 92 92 GLY GLY B . n B 1 81 ALA 81 93 93 ALA ALA B . n B 1 82 GLN 82 94 94 GLN GLN B . n B 1 83 ALA 83 95 95 ALA ALA B . n B 1 84 ALA 84 96 96 ALA ALA B . n B 1 85 ILE 85 97 97 ILE ILE B . n B 1 86 VAL 86 98 98 VAL VAL B . n B 1 87 VAL 87 99 99 VAL VAL B . n B 1 88 TYR 88 100 100 TYR TYR B . n B 1 89 ASP 89 101 101 ASP ASP B . n B 1 90 ILE 90 102 102 ILE ILE B . n B 1 91 THR 91 103 103 THR THR B . n B 1 92 ASN 92 104 104 ASN ASN B . n B 1 93 GLN 93 105 105 GLN GLN B . n B 1 94 GLU 94 106 106 GLU GLU B . n B 1 95 THR 95 107 107 THR THR B . n B 1 96 PHE 96 108 108 PHE PHE B . n B 1 97 ALA 97 109 109 ALA ALA B . n B 1 98 ARG 98 110 110 ARG ARG B . n B 1 99 ALA 99 111 111 ALA ALA B . n B 1 100 LYS 100 112 112 LYS LYS B . n B 1 101 THR 101 113 113 THR THR B . n B 1 102 TRP 102 114 114 TRP TRP B . n B 1 103 VAL 103 115 115 VAL VAL B . n B 1 104 LYS 104 116 116 LYS LYS B . n B 1 105 GLU 105 117 117 GLU GLU B . n B 1 106 LEU 106 118 118 LEU LEU B . n B 1 107 GLN 107 119 119 GLN GLN B . n B 1 108 ARG 108 120 120 ARG ARG B . n B 1 109 GLN 109 121 121 GLN GLN B . n B 1 110 ALA 110 122 122 ALA ALA B . n B 1 111 SER 111 123 123 SER SER B . n B 1 112 PRO 112 124 124 PRO PRO B . n B 1 113 SER 113 125 125 SER SER B . n B 1 114 ILE 114 126 126 ILE ILE B . n B 1 115 VAL 115 127 127 VAL VAL B . n B 1 116 ILE 116 128 128 ILE ILE B . n B 1 117 ALA 117 129 129 ALA ALA B . n B 1 118 LEU 118 130 130 LEU LEU B . n B 1 119 ALA 119 131 131 ALA ALA B . n B 1 120 GLY 120 132 132 GLY GLY B . n B 1 121 ASN 121 133 133 ASN ASN B . n B 1 122 LYS 122 134 134 LYS LYS B . n B 1 123 ALA 123 135 135 ALA ALA B . n B 1 124 ASP 124 136 136 ASP ASP B . n B 1 125 LEU 125 137 137 LEU LEU B . n B 1 126 ALA 126 138 138 ALA ALA B . n B 1 127 ASN 127 139 139 ASN ASN B . n B 1 128 LYS 128 140 140 LYS LYS B . n B 1 129 ARG 129 141 141 ARG ARG B . n B 1 130 MET 130 142 142 MET MET B . n B 1 131 VAL 131 143 143 VAL VAL B . n B 1 132 GLU 132 144 144 GLU GLU B . n B 1 133 TYR 133 145 145 TYR TYR B . n B 1 134 GLU 134 146 146 GLU GLU B . n B 1 135 GLU 135 147 147 GLU GLU B . n B 1 136 ALA 136 148 148 ALA ALA B . n B 1 137 GLN 137 149 149 GLN GLN B . n B 1 138 ALA 138 150 150 ALA ALA B . n B 1 139 TYR 139 151 151 TYR TYR B . n B 1 140 ALA 140 152 152 ALA ALA B . n B 1 141 ASP 141 153 153 ASP ASP B . n B 1 142 ASP 142 154 154 ASP ASP B . n B 1 143 ASN 143 155 155 ASN ASN B . n B 1 144 SER 144 156 156 SER SER B . n B 1 145 LEU 145 157 157 LEU LEU B . n B 1 146 LEU 146 158 158 LEU LEU B . n B 1 147 PHE 147 159 159 PHE PHE B . n B 1 148 MET 148 160 160 MET MET B . n B 1 149 GLU 149 161 161 GLU GLU B . n B 1 150 THR 150 162 162 THR THR B . n B 1 151 SER 151 163 163 SER SER B . n B 1 152 ALA 152 164 164 ALA ALA B . n B 1 153 LYS 153 165 165 LYS LYS B . n B 1 154 THR 154 166 166 THR THR B . n B 1 155 ALA 155 167 167 ALA ALA B . n B 1 156 MET 156 168 168 MET MET B . n B 1 157 ASN 157 169 169 ASN ASN B . n B 1 158 VAL 158 170 170 VAL VAL B . n B 1 159 ASN 159 171 171 ASN ASN B . n B 1 160 ASP 160 172 172 ASP ASP B . n B 1 161 LEU 161 173 173 LEU LEU B . n B 1 162 PHE 162 174 174 PHE PHE B . n B 1 163 LEU 163 175 175 LEU LEU B . n B 1 164 ALA 164 176 176 ALA ALA B . n B 1 165 ILE 165 177 177 ILE ILE B . n B 1 166 ALA 166 178 178 ALA ALA B . n B 1 167 LYS 167 179 179 LYS LYS B . n B 1 168 LYS 168 180 180 LYS LYS B . n B 1 169 LEU 169 181 181 LEU LEU B . n B 1 170 PRO 170 182 182 PRO PRO B . n B 1 171 LYS 171 183 183 LYS LYS B . n B 1 172 SER 172 184 ? ? ? B . n B 1 173 GLU 173 185 ? ? ? B . n B 1 174 PRO 174 186 ? ? ? B . n B 1 175 GLN 175 187 ? ? ? B . n B 1 176 ASN 176 188 ? ? ? B . n B 1 177 LEU 177 189 ? ? ? B . n B 1 178 GLY 178 190 ? ? ? B . n B 1 179 GLY 179 191 ? ? ? B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GDP 1 201 201 GDP GDP A . D 3 D1D 1 202 202 D1D D1D A . E 2 GDP 1 301 301 GDP GDP B . F 3 D1D 1 302 302 D1D D1D B . G 4 HOH 1 203 2 HOH HOH A . G 4 HOH 2 204 4 HOH HOH A . G 4 HOH 3 205 6 HOH HOH A . G 4 HOH 4 206 7 HOH HOH A . G 4 HOH 5 207 9 HOH HOH A . G 4 HOH 6 208 10 HOH HOH A . G 4 HOH 7 209 11 HOH HOH A . G 4 HOH 8 210 12 HOH HOH A . G 4 HOH 9 211 14 HOH HOH A . G 4 HOH 10 212 17 HOH HOH A . G 4 HOH 11 213 18 HOH HOH A . G 4 HOH 12 214 20 HOH HOH A . G 4 HOH 13 215 22 HOH HOH A . G 4 HOH 14 216 23 HOH HOH A . G 4 HOH 15 217 24 HOH HOH A . G 4 HOH 16 218 26 HOH HOH A . G 4 HOH 17 219 29 HOH HOH A . G 4 HOH 18 220 34 HOH HOH A . G 4 HOH 19 221 36 HOH HOH A . G 4 HOH 20 222 39 HOH HOH A . G 4 HOH 21 223 42 HOH HOH A . G 4 HOH 22 224 43 HOH HOH A . G 4 HOH 23 225 44 HOH HOH A . G 4 HOH 24 226 49 HOH HOH A . G 4 HOH 25 227 51 HOH HOH A . G 4 HOH 26 228 52 HOH HOH A . G 4 HOH 27 229 53 HOH HOH A . G 4 HOH 28 230 54 HOH HOH A . G 4 HOH 29 231 61 HOH HOH A . G 4 HOH 30 232 62 HOH HOH A . G 4 HOH 31 233 63 HOH HOH A . G 4 HOH 32 234 64 HOH HOH A . G 4 HOH 33 235 65 HOH HOH A . G 4 HOH 34 236 67 HOH HOH A . G 4 HOH 35 237 68 HOH HOH A . G 4 HOH 36 238 69 HOH HOH A . G 4 HOH 37 239 70 HOH HOH A . G 4 HOH 38 240 72 HOH HOH A . G 4 HOH 39 241 77 HOH HOH A . G 4 HOH 40 242 78 HOH HOH A . G 4 HOH 41 243 82 HOH HOH A . G 4 HOH 42 244 83 HOH HOH A . G 4 HOH 43 245 85 HOH HOH A . G 4 HOH 44 246 88 HOH HOH A . G 4 HOH 45 247 89 HOH HOH A . G 4 HOH 46 248 90 HOH HOH A . G 4 HOH 47 249 91 HOH HOH A . G 4 HOH 48 250 92 HOH HOH A . G 4 HOH 49 251 93 HOH HOH A . G 4 HOH 50 252 94 HOH HOH A . G 4 HOH 51 253 95 HOH HOH A . G 4 HOH 52 254 96 HOH HOH A . G 4 HOH 53 255 97 HOH HOH A . G 4 HOH 54 256 98 HOH HOH A . G 4 HOH 55 257 99 HOH HOH A . G 4 HOH 56 258 100 HOH HOH A . G 4 HOH 57 259 101 HOH HOH A . G 4 HOH 58 260 104 HOH HOH A . G 4 HOH 59 261 113 HOH HOH A . G 4 HOH 60 262 114 HOH HOH A . G 4 HOH 61 263 115 HOH HOH A . G 4 HOH 62 264 117 HOH HOH A . G 4 HOH 63 265 118 HOH HOH A . G 4 HOH 64 266 122 HOH HOH A . H 4 HOH 1 303 1 HOH HOH B . H 4 HOH 2 304 3 HOH HOH B . H 4 HOH 3 305 5 HOH HOH B . H 4 HOH 4 306 8 HOH HOH B . H 4 HOH 5 307 13 HOH HOH B . H 4 HOH 6 308 15 HOH HOH B . H 4 HOH 7 309 16 HOH HOH B . H 4 HOH 8 310 19 HOH HOH B . H 4 HOH 9 311 21 HOH HOH B . H 4 HOH 10 312 25 HOH HOH B . H 4 HOH 11 313 27 HOH HOH B . H 4 HOH 12 314 28 HOH HOH B . H 4 HOH 13 315 30 HOH HOH B . H 4 HOH 14 316 31 HOH HOH B . H 4 HOH 15 317 32 HOH HOH B . H 4 HOH 16 318 33 HOH HOH B . H 4 HOH 17 319 35 HOH HOH B . H 4 HOH 18 320 37 HOH HOH B . H 4 HOH 19 321 38 HOH HOH B . H 4 HOH 20 322 40 HOH HOH B . H 4 HOH 21 323 41 HOH HOH B . H 4 HOH 22 324 45 HOH HOH B . H 4 HOH 23 325 46 HOH HOH B . H 4 HOH 24 326 47 HOH HOH B . H 4 HOH 25 327 48 HOH HOH B . H 4 HOH 26 328 50 HOH HOH B . H 4 HOH 27 329 55 HOH HOH B . H 4 HOH 28 330 56 HOH HOH B . H 4 HOH 29 331 57 HOH HOH B . H 4 HOH 30 332 58 HOH HOH B . H 4 HOH 31 333 59 HOH HOH B . H 4 HOH 32 334 60 HOH HOH B . H 4 HOH 33 335 66 HOH HOH B . H 4 HOH 34 336 71 HOH HOH B . H 4 HOH 35 337 73 HOH HOH B . H 4 HOH 36 338 74 HOH HOH B . H 4 HOH 37 339 75 HOH HOH B . H 4 HOH 38 340 76 HOH HOH B . H 4 HOH 39 341 79 HOH HOH B . H 4 HOH 40 342 80 HOH HOH B . H 4 HOH 41 343 81 HOH HOH B . H 4 HOH 42 344 84 HOH HOH B . H 4 HOH 43 345 86 HOH HOH B . H 4 HOH 44 346 87 HOH HOH B . H 4 HOH 45 347 102 HOH HOH B . H 4 HOH 46 348 103 HOH HOH B . H 4 HOH 47 349 105 HOH HOH B . H 4 HOH 48 350 106 HOH HOH B . H 4 HOH 49 351 107 HOH HOH B . H 4 HOH 50 352 108 HOH HOH B . H 4 HOH 51 353 109 HOH HOH B . H 4 HOH 52 354 110 HOH HOH B . H 4 HOH 53 355 111 HOH HOH B . H 4 HOH 54 356 112 HOH HOH B . H 4 HOH 55 357 116 HOH HOH B . H 4 HOH 56 358 119 HOH HOH B . H 4 HOH 57 359 120 HOH HOH B . H 4 HOH 58 360 121 HOH HOH B . H 4 HOH 59 361 123 HOH HOH B . H 4 HOH 60 362 124 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-07-04 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_initial_refinement_model 6 5 'Structure model' struct_ref_seq_dif 7 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_ref_seq_dif.details' 4 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_phasing_MR.entry_id 2HEI _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.500 _pdbx_phasing_MR.d_res_low_rotation 23.990 _pdbx_phasing_MR.d_res_high_translation 2.500 _pdbx_phasing_MR.d_res_low_translation 23.990 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 PHASER . ? program 'R. J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC refmac_5.2.0019 24/04/2001 program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran ? 4 PDB_EXTRACT 1.701 'Nov. 1, 2005' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 ARP/wARP . ? ? ? ? 'model building' ? ? ? 6 MolProbity . ? ? ? ? 'model building' ? ? ? 7 # _pdbx_database_remark.id 300 _pdbx_database_remark.text ;BIOMOLECULE: 1 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT WHICH CONSISTS OF 2 CHAIN(S). ACCORDING TO AUTHORS, THE BIOLOGICAL UNIT OF THE PROTEIN IS NOT KNOWN ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 30 ? ? 83.25 7.58 2 1 ALA A 167 ? ? 82.36 -3.83 3 1 ALA B 30 ? ? 80.00 8.90 4 1 LEU B 137 ? ? -98.05 47.99 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 C2 ? A D1D 202 ? 'WRONG HAND' . 2 1 C3 ? A D1D 202 ? 'WRONG HAND' . 3 1 C2 ? B D1D 302 ? 'WRONG HAND' . 4 1 C3 ? B D1D 302 ? 'WRONG HAND' . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 91 ? CZ ? A ARG 79 CZ 2 1 Y 1 A ARG 91 ? NH1 ? A ARG 79 NH1 3 1 Y 1 A ARG 91 ? NH2 ? A ARG 79 NH2 4 1 Y 1 A GLN 105 ? CD ? A GLN 93 CD 5 1 Y 1 A GLN 105 ? OE1 ? A GLN 93 OE1 6 1 Y 1 A GLN 105 ? NE2 ? A GLN 93 NE2 7 1 Y 1 A LYS 180 ? CE ? A LYS 168 CE 8 1 Y 1 A LYS 180 ? NZ ? A LYS 168 NZ 9 1 Y 1 B LYS 17 ? CG ? B LYS 5 CG 10 1 Y 1 B LYS 17 ? CD ? B LYS 5 CD 11 1 Y 1 B LYS 17 ? CE ? B LYS 5 CE 12 1 Y 1 B LYS 17 ? NZ ? B LYS 5 NZ 13 1 Y 1 B GLN 105 ? CD ? B GLN 93 CD 14 1 Y 1 B GLN 105 ? OE1 ? B GLN 93 OE1 15 1 Y 1 B GLN 105 ? NE2 ? B GLN 93 NE2 16 1 Y 1 B ARG 120 ? NE ? B ARG 108 NE 17 1 Y 1 B ARG 120 ? CZ ? B ARG 108 CZ 18 1 Y 1 B ARG 120 ? NH1 ? B ARG 108 NH1 19 1 Y 1 B ARG 120 ? NH2 ? B ARG 108 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 13 ? A GLY 1 2 1 Y 1 A SER 14 ? A SER 2 3 1 Y 1 A ALA 15 ? A ALA 3 4 1 Y 1 A SER 16 ? A SER 4 5 1 Y 1 A LYS 17 ? A LYS 5 6 1 Y 1 A ASP 65 ? A ASP 53 7 1 Y 1 A ASP 66 ? A ASP 54 8 1 Y 1 A THR 67 ? A THR 55 9 1 Y 1 A SER 184 ? A SER 172 10 1 Y 1 A GLU 185 ? A GLU 173 11 1 Y 1 A PRO 186 ? A PRO 174 12 1 Y 1 A GLN 187 ? A GLN 175 13 1 Y 1 A ASN 188 ? A ASN 176 14 1 Y 1 A LEU 189 ? A LEU 177 15 1 Y 1 A GLY 190 ? A GLY 178 16 1 Y 1 A GLY 191 ? A GLY 179 17 1 Y 1 B GLY 13 ? B GLY 1 18 1 Y 1 B SER 14 ? B SER 2 19 1 Y 1 B ALA 15 ? B ALA 3 20 1 Y 1 B SER 16 ? B SER 4 21 1 Y 1 B ASP 65 ? B ASP 53 22 1 Y 1 B ASP 66 ? B ASP 54 23 1 Y 1 B SER 184 ? B SER 172 24 1 Y 1 B GLU 185 ? B GLU 173 25 1 Y 1 B PRO 186 ? B PRO 174 26 1 Y 1 B GLN 187 ? B GLN 175 27 1 Y 1 B ASN 188 ? B ASN 176 28 1 Y 1 B LEU 189 ? B LEU 177 29 1 Y 1 B GLY 190 ? B GLY 178 30 1 Y 1 B GLY 191 ? B GLY 179 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 D1D S1 S N N 88 D1D C1 C N N 89 D1D C2 C N S 90 D1D O2 O N N 91 D1D C3 C N S 92 D1D O3 O N N 93 D1D C4 C N N 94 D1D S4 S N N 95 D1D H1C1 H N N 96 D1D H1C2 H N N 97 D1D H2 H N N 98 D1D HA H N N 99 D1D H3 H N N 100 D1D HB H N N 101 D1D H4C1 H N N 102 D1D H4C2 H N N 103 GDP PB P N N 104 GDP O1B O N N 105 GDP O2B O N N 106 GDP O3B O N N 107 GDP O3A O N N 108 GDP PA P N N 109 GDP O1A O N N 110 GDP O2A O N N 111 GDP "O5'" O N N 112 GDP "C5'" C N N 113 GDP "C4'" C N R 114 GDP "O4'" O N N 115 GDP "C3'" C N S 116 GDP "O3'" O N N 117 GDP "C2'" C N R 118 GDP "O2'" O N N 119 GDP "C1'" C N R 120 GDP N9 N Y N 121 GDP C8 C Y N 122 GDP N7 N Y N 123 GDP C5 C Y N 124 GDP C6 C N N 125 GDP O6 O N N 126 GDP N1 N N N 127 GDP C2 C N N 128 GDP N2 N N N 129 GDP N3 N N N 130 GDP C4 C Y N 131 GDP HOB2 H N N 132 GDP HOB3 H N N 133 GDP HOA2 H N N 134 GDP "H5'" H N N 135 GDP "H5''" H N N 136 GDP "H4'" H N N 137 GDP "H3'" H N N 138 GDP "HO3'" H N N 139 GDP "H2'" H N N 140 GDP "HO2'" H N N 141 GDP "H1'" H N N 142 GDP H8 H N N 143 GDP HN1 H N N 144 GDP HN21 H N N 145 GDP HN22 H N N 146 GLN N N N N 147 GLN CA C N S 148 GLN C C N N 149 GLN O O N N 150 GLN CB C N N 151 GLN CG C N N 152 GLN CD C N N 153 GLN OE1 O N N 154 GLN NE2 N N N 155 GLN OXT O N N 156 GLN H H N N 157 GLN H2 H N N 158 GLN HA H N N 159 GLN HB2 H N N 160 GLN HB3 H N N 161 GLN HG2 H N N 162 GLN HG3 H N N 163 GLN HE21 H N N 164 GLN HE22 H N N 165 GLN HXT H N N 166 GLU N N N N 167 GLU CA C N S 168 GLU C C N N 169 GLU O O N N 170 GLU CB C N N 171 GLU CG C N N 172 GLU CD C N N 173 GLU OE1 O N N 174 GLU OE2 O N N 175 GLU OXT O N N 176 GLU H H N N 177 GLU H2 H N N 178 GLU HA H N N 179 GLU HB2 H N N 180 GLU HB3 H N N 181 GLU HG2 H N N 182 GLU HG3 H N N 183 GLU HE2 H N N 184 GLU HXT H N N 185 GLY N N N N 186 GLY CA C N N 187 GLY C C N N 188 GLY O O N N 189 GLY OXT O N N 190 GLY H H N N 191 GLY H2 H N N 192 GLY HA2 H N N 193 GLY HA3 H N N 194 GLY HXT H N N 195 HIS N N N N 196 HIS CA C N S 197 HIS C C N N 198 HIS O O N N 199 HIS CB C N N 200 HIS CG C Y N 201 HIS ND1 N Y N 202 HIS CD2 C Y N 203 HIS CE1 C Y N 204 HIS NE2 N Y N 205 HIS OXT O N N 206 HIS H H N N 207 HIS H2 H N N 208 HIS HA H N N 209 HIS HB2 H N N 210 HIS HB3 H N N 211 HIS HD1 H N N 212 HIS HD2 H N N 213 HIS HE1 H N N 214 HIS HE2 H N N 215 HIS HXT H N N 216 HOH O O N N 217 HOH H1 H N N 218 HOH H2 H N N 219 ILE N N N N 220 ILE CA C N S 221 ILE C C N N 222 ILE O O N N 223 ILE CB C N S 224 ILE CG1 C N N 225 ILE CG2 C N N 226 ILE CD1 C N N 227 ILE OXT O N N 228 ILE H H N N 229 ILE H2 H N N 230 ILE HA H N N 231 ILE HB H N N 232 ILE HG12 H N N 233 ILE HG13 H N N 234 ILE HG21 H N N 235 ILE HG22 H N N 236 ILE HG23 H N N 237 ILE HD11 H N N 238 ILE HD12 H N N 239 ILE HD13 H N N 240 ILE HXT H N N 241 LEU N N N N 242 LEU CA C N S 243 LEU C C N N 244 LEU O O N N 245 LEU CB C N N 246 LEU CG C N N 247 LEU CD1 C N N 248 LEU CD2 C N N 249 LEU OXT O N N 250 LEU H H N N 251 LEU H2 H N N 252 LEU HA H N N 253 LEU HB2 H N N 254 LEU HB3 H N N 255 LEU HG H N N 256 LEU HD11 H N N 257 LEU HD12 H N N 258 LEU HD13 H N N 259 LEU HD21 H N N 260 LEU HD22 H N N 261 LEU HD23 H N N 262 LEU HXT H N N 263 LYS N N N N 264 LYS CA C N S 265 LYS C C N N 266 LYS O O N N 267 LYS CB C N N 268 LYS CG C N N 269 LYS CD C N N 270 LYS CE C N N 271 LYS NZ N N N 272 LYS OXT O N N 273 LYS H H N N 274 LYS H2 H N N 275 LYS HA H N N 276 LYS HB2 H N N 277 LYS HB3 H N N 278 LYS HG2 H N N 279 LYS HG3 H N N 280 LYS HD2 H N N 281 LYS HD3 H N N 282 LYS HE2 H N N 283 LYS HE3 H N N 284 LYS HZ1 H N N 285 LYS HZ2 H N N 286 LYS HZ3 H N N 287 LYS HXT H N N 288 MET N N N N 289 MET CA C N S 290 MET C C N N 291 MET O O N N 292 MET CB C N N 293 MET CG C N N 294 MET SD S N N 295 MET CE C N N 296 MET OXT O N N 297 MET H H N N 298 MET H2 H N N 299 MET HA H N N 300 MET HB2 H N N 301 MET HB3 H N N 302 MET HG2 H N N 303 MET HG3 H N N 304 MET HE1 H N N 305 MET HE2 H N N 306 MET HE3 H N N 307 MET HXT H N N 308 PHE N N N N 309 PHE CA C N S 310 PHE C C N N 311 PHE O O N N 312 PHE CB C N N 313 PHE CG C Y N 314 PHE CD1 C Y N 315 PHE CD2 C Y N 316 PHE CE1 C Y N 317 PHE CE2 C Y N 318 PHE CZ C Y N 319 PHE OXT O N N 320 PHE H H N N 321 PHE H2 H N N 322 PHE HA H N N 323 PHE HB2 H N N 324 PHE HB3 H N N 325 PHE HD1 H N N 326 PHE HD2 H N N 327 PHE HE1 H N N 328 PHE HE2 H N N 329 PHE HZ H N N 330 PHE HXT H N N 331 PRO N N N N 332 PRO CA C N S 333 PRO C C N N 334 PRO O O N N 335 PRO CB C N N 336 PRO CG C N N 337 PRO CD C N N 338 PRO OXT O N N 339 PRO H H N N 340 PRO HA H N N 341 PRO HB2 H N N 342 PRO HB3 H N N 343 PRO HG2 H N N 344 PRO HG3 H N N 345 PRO HD2 H N N 346 PRO HD3 H N N 347 PRO HXT H N N 348 SER N N N N 349 SER CA C N S 350 SER C C N N 351 SER O O N N 352 SER CB C N N 353 SER OG O N N 354 SER OXT O N N 355 SER H H N N 356 SER H2 H N N 357 SER HA H N N 358 SER HB2 H N N 359 SER HB3 H N N 360 SER HG H N N 361 SER HXT H N N 362 THR N N N N 363 THR CA C N S 364 THR C C N N 365 THR O O N N 366 THR CB C N R 367 THR OG1 O N N 368 THR CG2 C N N 369 THR OXT O N N 370 THR H H N N 371 THR H2 H N N 372 THR HA H N N 373 THR HB H N N 374 THR HG1 H N N 375 THR HG21 H N N 376 THR HG22 H N N 377 THR HG23 H N N 378 THR HXT H N N 379 TRP N N N N 380 TRP CA C N S 381 TRP C C N N 382 TRP O O N N 383 TRP CB C N N 384 TRP CG C Y N 385 TRP CD1 C Y N 386 TRP CD2 C Y N 387 TRP NE1 N Y N 388 TRP CE2 C Y N 389 TRP CE3 C Y N 390 TRP CZ2 C Y N 391 TRP CZ3 C Y N 392 TRP CH2 C Y N 393 TRP OXT O N N 394 TRP H H N N 395 TRP H2 H N N 396 TRP HA H N N 397 TRP HB2 H N N 398 TRP HB3 H N N 399 TRP HD1 H N N 400 TRP HE1 H N N 401 TRP HE3 H N N 402 TRP HZ2 H N N 403 TRP HZ3 H N N 404 TRP HH2 H N N 405 TRP HXT H N N 406 TYR N N N N 407 TYR CA C N S 408 TYR C C N N 409 TYR O O N N 410 TYR CB C N N 411 TYR CG C Y N 412 TYR CD1 C Y N 413 TYR CD2 C Y N 414 TYR CE1 C Y N 415 TYR CE2 C Y N 416 TYR CZ C Y N 417 TYR OH O N N 418 TYR OXT O N N 419 TYR H H N N 420 TYR H2 H N N 421 TYR HA H N N 422 TYR HB2 H N N 423 TYR HB3 H N N 424 TYR HD1 H N N 425 TYR HD2 H N N 426 TYR HE1 H N N 427 TYR HE2 H N N 428 TYR HH H N N 429 TYR HXT H N N 430 VAL N N N N 431 VAL CA C N S 432 VAL C C N N 433 VAL O O N N 434 VAL CB C N N 435 VAL CG1 C N N 436 VAL CG2 C N N 437 VAL OXT O N N 438 VAL H H N N 439 VAL H2 H N N 440 VAL HA H N N 441 VAL HB H N N 442 VAL HG11 H N N 443 VAL HG12 H N N 444 VAL HG13 H N N 445 VAL HG21 H N N 446 VAL HG22 H N N 447 VAL HG23 H N N 448 VAL HXT H N N 449 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 D1D S1 C1 sing N N 83 D1D S1 S4 sing N N 84 D1D C1 C2 sing N N 85 D1D C1 H1C1 sing N N 86 D1D C1 H1C2 sing N N 87 D1D C2 O2 sing N N 88 D1D C2 C3 sing N N 89 D1D C2 H2 sing N N 90 D1D O2 HA sing N N 91 D1D C3 O3 sing N N 92 D1D C3 C4 sing N N 93 D1D C3 H3 sing N N 94 D1D O3 HB sing N N 95 D1D C4 S4 sing N N 96 D1D C4 H4C1 sing N N 97 D1D C4 H4C2 sing N N 98 GDP PB O1B doub N N 99 GDP PB O2B sing N N 100 GDP PB O3B sing N N 101 GDP PB O3A sing N N 102 GDP O2B HOB2 sing N N 103 GDP O3B HOB3 sing N N 104 GDP O3A PA sing N N 105 GDP PA O1A doub N N 106 GDP PA O2A sing N N 107 GDP PA "O5'" sing N N 108 GDP O2A HOA2 sing N N 109 GDP "O5'" "C5'" sing N N 110 GDP "C5'" "C4'" sing N N 111 GDP "C5'" "H5'" sing N N 112 GDP "C5'" "H5''" sing N N 113 GDP "C4'" "O4'" sing N N 114 GDP "C4'" "C3'" sing N N 115 GDP "C4'" "H4'" sing N N 116 GDP "O4'" "C1'" sing N N 117 GDP "C3'" "O3'" sing N N 118 GDP "C3'" "C2'" sing N N 119 GDP "C3'" "H3'" sing N N 120 GDP "O3'" "HO3'" sing N N 121 GDP "C2'" "O2'" sing N N 122 GDP "C2'" "C1'" sing N N 123 GDP "C2'" "H2'" sing N N 124 GDP "O2'" "HO2'" sing N N 125 GDP "C1'" N9 sing N N 126 GDP "C1'" "H1'" sing N N 127 GDP N9 C8 sing Y N 128 GDP N9 C4 sing Y N 129 GDP C8 N7 doub Y N 130 GDP C8 H8 sing N N 131 GDP N7 C5 sing Y N 132 GDP C5 C6 sing N N 133 GDP C5 C4 doub Y N 134 GDP C6 O6 doub N N 135 GDP C6 N1 sing N N 136 GDP N1 C2 sing N N 137 GDP N1 HN1 sing N N 138 GDP C2 N2 sing N N 139 GDP C2 N3 doub N N 140 GDP N2 HN21 sing N N 141 GDP N2 HN22 sing N N 142 GDP N3 C4 sing N N 143 GLN N CA sing N N 144 GLN N H sing N N 145 GLN N H2 sing N N 146 GLN CA C sing N N 147 GLN CA CB sing N N 148 GLN CA HA sing N N 149 GLN C O doub N N 150 GLN C OXT sing N N 151 GLN CB CG sing N N 152 GLN CB HB2 sing N N 153 GLN CB HB3 sing N N 154 GLN CG CD sing N N 155 GLN CG HG2 sing N N 156 GLN CG HG3 sing N N 157 GLN CD OE1 doub N N 158 GLN CD NE2 sing N N 159 GLN NE2 HE21 sing N N 160 GLN NE2 HE22 sing N N 161 GLN OXT HXT sing N N 162 GLU N CA sing N N 163 GLU N H sing N N 164 GLU N H2 sing N N 165 GLU CA C sing N N 166 GLU CA CB sing N N 167 GLU CA HA sing N N 168 GLU C O doub N N 169 GLU C OXT sing N N 170 GLU CB CG sing N N 171 GLU CB HB2 sing N N 172 GLU CB HB3 sing N N 173 GLU CG CD sing N N 174 GLU CG HG2 sing N N 175 GLU CG HG3 sing N N 176 GLU CD OE1 doub N N 177 GLU CD OE2 sing N N 178 GLU OE2 HE2 sing N N 179 GLU OXT HXT sing N N 180 GLY N CA sing N N 181 GLY N H sing N N 182 GLY N H2 sing N N 183 GLY CA C sing N N 184 GLY CA HA2 sing N N 185 GLY CA HA3 sing N N 186 GLY C O doub N N 187 GLY C OXT sing N N 188 GLY OXT HXT sing N N 189 HIS N CA sing N N 190 HIS N H sing N N 191 HIS N H2 sing N N 192 HIS CA C sing N N 193 HIS CA CB sing N N 194 HIS CA HA sing N N 195 HIS C O doub N N 196 HIS C OXT sing N N 197 HIS CB CG sing N N 198 HIS CB HB2 sing N N 199 HIS CB HB3 sing N N 200 HIS CG ND1 sing Y N 201 HIS CG CD2 doub Y N 202 HIS ND1 CE1 doub Y N 203 HIS ND1 HD1 sing N N 204 HIS CD2 NE2 sing Y N 205 HIS CD2 HD2 sing N N 206 HIS CE1 NE2 sing Y N 207 HIS CE1 HE1 sing N N 208 HIS NE2 HE2 sing N N 209 HIS OXT HXT sing N N 210 HOH O H1 sing N N 211 HOH O H2 sing N N 212 ILE N CA sing N N 213 ILE N H sing N N 214 ILE N H2 sing N N 215 ILE CA C sing N N 216 ILE CA CB sing N N 217 ILE CA HA sing N N 218 ILE C O doub N N 219 ILE C OXT sing N N 220 ILE CB CG1 sing N N 221 ILE CB CG2 sing N N 222 ILE CB HB sing N N 223 ILE CG1 CD1 sing N N 224 ILE CG1 HG12 sing N N 225 ILE CG1 HG13 sing N N 226 ILE CG2 HG21 sing N N 227 ILE CG2 HG22 sing N N 228 ILE CG2 HG23 sing N N 229 ILE CD1 HD11 sing N N 230 ILE CD1 HD12 sing N N 231 ILE CD1 HD13 sing N N 232 ILE OXT HXT sing N N 233 LEU N CA sing N N 234 LEU N H sing N N 235 LEU N H2 sing N N 236 LEU CA C sing N N 237 LEU CA CB sing N N 238 LEU CA HA sing N N 239 LEU C O doub N N 240 LEU C OXT sing N N 241 LEU CB CG sing N N 242 LEU CB HB2 sing N N 243 LEU CB HB3 sing N N 244 LEU CG CD1 sing N N 245 LEU CG CD2 sing N N 246 LEU CG HG sing N N 247 LEU CD1 HD11 sing N N 248 LEU CD1 HD12 sing N N 249 LEU CD1 HD13 sing N N 250 LEU CD2 HD21 sing N N 251 LEU CD2 HD22 sing N N 252 LEU CD2 HD23 sing N N 253 LEU OXT HXT sing N N 254 LYS N CA sing N N 255 LYS N H sing N N 256 LYS N H2 sing N N 257 LYS CA C sing N N 258 LYS CA CB sing N N 259 LYS CA HA sing N N 260 LYS C O doub N N 261 LYS C OXT sing N N 262 LYS CB CG sing N N 263 LYS CB HB2 sing N N 264 LYS CB HB3 sing N N 265 LYS CG CD sing N N 266 LYS CG HG2 sing N N 267 LYS CG HG3 sing N N 268 LYS CD CE sing N N 269 LYS CD HD2 sing N N 270 LYS CD HD3 sing N N 271 LYS CE NZ sing N N 272 LYS CE HE2 sing N N 273 LYS CE HE3 sing N N 274 LYS NZ HZ1 sing N N 275 LYS NZ HZ2 sing N N 276 LYS NZ HZ3 sing N N 277 LYS OXT HXT sing N N 278 MET N CA sing N N 279 MET N H sing N N 280 MET N H2 sing N N 281 MET CA C sing N N 282 MET CA CB sing N N 283 MET CA HA sing N N 284 MET C O doub N N 285 MET C OXT sing N N 286 MET CB CG sing N N 287 MET CB HB2 sing N N 288 MET CB HB3 sing N N 289 MET CG SD sing N N 290 MET CG HG2 sing N N 291 MET CG HG3 sing N N 292 MET SD CE sing N N 293 MET CE HE1 sing N N 294 MET CE HE2 sing N N 295 MET CE HE3 sing N N 296 MET OXT HXT sing N N 297 PHE N CA sing N N 298 PHE N H sing N N 299 PHE N H2 sing N N 300 PHE CA C sing N N 301 PHE CA CB sing N N 302 PHE CA HA sing N N 303 PHE C O doub N N 304 PHE C OXT sing N N 305 PHE CB CG sing N N 306 PHE CB HB2 sing N N 307 PHE CB HB3 sing N N 308 PHE CG CD1 doub Y N 309 PHE CG CD2 sing Y N 310 PHE CD1 CE1 sing Y N 311 PHE CD1 HD1 sing N N 312 PHE CD2 CE2 doub Y N 313 PHE CD2 HD2 sing N N 314 PHE CE1 CZ doub Y N 315 PHE CE1 HE1 sing N N 316 PHE CE2 CZ sing Y N 317 PHE CE2 HE2 sing N N 318 PHE CZ HZ sing N N 319 PHE OXT HXT sing N N 320 PRO N CA sing N N 321 PRO N CD sing N N 322 PRO N H sing N N 323 PRO CA C sing N N 324 PRO CA CB sing N N 325 PRO CA HA sing N N 326 PRO C O doub N N 327 PRO C OXT sing N N 328 PRO CB CG sing N N 329 PRO CB HB2 sing N N 330 PRO CB HB3 sing N N 331 PRO CG CD sing N N 332 PRO CG HG2 sing N N 333 PRO CG HG3 sing N N 334 PRO CD HD2 sing N N 335 PRO CD HD3 sing N N 336 PRO OXT HXT sing N N 337 SER N CA sing N N 338 SER N H sing N N 339 SER N H2 sing N N 340 SER CA C sing N N 341 SER CA CB sing N N 342 SER CA HA sing N N 343 SER C O doub N N 344 SER C OXT sing N N 345 SER CB OG sing N N 346 SER CB HB2 sing N N 347 SER CB HB3 sing N N 348 SER OG HG sing N N 349 SER OXT HXT sing N N 350 THR N CA sing N N 351 THR N H sing N N 352 THR N H2 sing N N 353 THR CA C sing N N 354 THR CA CB sing N N 355 THR CA HA sing N N 356 THR C O doub N N 357 THR C OXT sing N N 358 THR CB OG1 sing N N 359 THR CB CG2 sing N N 360 THR CB HB sing N N 361 THR OG1 HG1 sing N N 362 THR CG2 HG21 sing N N 363 THR CG2 HG22 sing N N 364 THR CG2 HG23 sing N N 365 THR OXT HXT sing N N 366 TRP N CA sing N N 367 TRP N H sing N N 368 TRP N H2 sing N N 369 TRP CA C sing N N 370 TRP CA CB sing N N 371 TRP CA HA sing N N 372 TRP C O doub N N 373 TRP C OXT sing N N 374 TRP CB CG sing N N 375 TRP CB HB2 sing N N 376 TRP CB HB3 sing N N 377 TRP CG CD1 doub Y N 378 TRP CG CD2 sing Y N 379 TRP CD1 NE1 sing Y N 380 TRP CD1 HD1 sing N N 381 TRP CD2 CE2 doub Y N 382 TRP CD2 CE3 sing Y N 383 TRP NE1 CE2 sing Y N 384 TRP NE1 HE1 sing N N 385 TRP CE2 CZ2 sing Y N 386 TRP CE3 CZ3 doub Y N 387 TRP CE3 HE3 sing N N 388 TRP CZ2 CH2 doub Y N 389 TRP CZ2 HZ2 sing N N 390 TRP CZ3 CH2 sing Y N 391 TRP CZ3 HZ3 sing N N 392 TRP CH2 HH2 sing N N 393 TRP OXT HXT sing N N 394 TYR N CA sing N N 395 TYR N H sing N N 396 TYR N H2 sing N N 397 TYR CA C sing N N 398 TYR CA CB sing N N 399 TYR CA HA sing N N 400 TYR C O doub N N 401 TYR C OXT sing N N 402 TYR CB CG sing N N 403 TYR CB HB2 sing N N 404 TYR CB HB3 sing N N 405 TYR CG CD1 doub Y N 406 TYR CG CD2 sing Y N 407 TYR CD1 CE1 sing Y N 408 TYR CD1 HD1 sing N N 409 TYR CD2 CE2 doub Y N 410 TYR CD2 HD2 sing N N 411 TYR CE1 CZ doub Y N 412 TYR CE1 HE1 sing N N 413 TYR CE2 CZ sing Y N 414 TYR CE2 HE2 sing N N 415 TYR CZ OH sing N N 416 TYR OH HH sing N N 417 TYR OXT HXT sing N N 418 VAL N CA sing N N 419 VAL N H sing N N 420 VAL N H2 sing N N 421 VAL CA C sing N N 422 VAL CA CB sing N N 423 VAL CA HA sing N N 424 VAL C O doub N N 425 VAL C OXT sing N N 426 VAL CB CG1 sing N N 427 VAL CB CG2 sing N N 428 VAL CB HB sing N N 429 VAL CG1 HG11 sing N N 430 VAL CG1 HG12 sing N N 431 VAL CG1 HG13 sing N N 432 VAL CG2 HG21 sing N N 433 VAL CG2 HG22 sing N N 434 VAL CG2 HG23 sing N N 435 VAL OXT HXT sing N N 436 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "GUANOSINE-5'-DIPHOSPHATE" GDP 3 '(4S,5S)-1,2-DITHIANE-4,5-DIOL' D1D 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1N6I _pdbx_initial_refinement_model.details 'PDB ENTRY 1N6I' #