data_2HEO # _entry.id 2HEO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2HEO pdb_00002heo 10.2210/pdb2heo/pdb NDB PD0823 ? ? RCSB RCSB038261 ? ? WWPDB D_1000038261 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1J75 _pdbx_database_related.details 'The same complex, but with a mutant of protein DLM1' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2HEO _pdbx_database_status.recvd_initial_deposition_date 2006-06-21 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Magis, C.' 1 'Gasparini, S.' 2 'Charbonnier, J.B.' 3 'Stura, E.' 4 'Le Du, M.H.' 5 'Menez, A.' 6 'Cuniasse, P.' 7 # _citation.id primary _citation.title ;Structure-based secondary structure-independent approach to design protein ligands: Application to the design of Kv1.2 potassium channel blockers. ; _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_volume 128 _citation.page_first 16190 _citation.page_last 16205 _citation.year 2006 _citation.journal_id_ASTM JACSAT _citation.country US _citation.journal_id_ISSN 0002-7863 _citation.journal_id_CSD 0004 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17165772 _citation.pdbx_database_id_DOI 10.1021/ja0646491 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Magis, C.' 1 ? primary 'Gasparini, D.' 2 ? primary 'Lecoq, A.' 3 ? primary 'Le Du, M.H.' 4 ? primary 'Stura, E.' 5 ? primary 'Charbonnier, J.B.' 6 ? primary 'Mourier, G.' 7 ? primary 'Boulain, J.C.' 8 ? primary 'Pardo, L.' 9 ? primary 'Caruana, A.' 10 ? primary 'Joly, A.' 11 ? primary 'Lefranc, M.' 12 ? primary 'Masella, M.' 13 ? primary 'Menez, A.' 14 ? primary 'Cuniasse, P.' 15 ? # _cell.entry_id 2HEO _cell.length_a 79.910 _cell.length_b 79.910 _cell.length_c 55.335 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2HEO _symmetry.space_group_name_H-M 'P 61' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*TP*CP*GP*CP*GP*CP*G)-3'" 2114.398 2 ? ? ? ? 2 polymer man 'Z-DNA binding protein 1' 7438.605 2 ? 'K130A, G132F, E162S, A164K, T165Y' 'N-TERMINAL WINGED-HELIX DOMAIN ZALPHA' ? 3 water nat water 18.015 228 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'Tumor stroma and activated macrophage protein DLM-1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DT)(DC)(DG)(DC)(DG)(DC)(DG)' TCGCGCG B,E ? 2 'polypeptide(L)' no no GSHMLSTGDNLEQKILQVLSDDGGPVAIFQLVKKCQVPKKTLNQVLYRLKKEDRVSSPSPKYWSIGG GSHMLSTGDNLEQKILQVLSDDGGPVAIFQLVKKCQVPKKTLNQVLYRLKKEDRVSSPSPKYWSIGG A,D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DC n 1 3 DG n 1 4 DC n 1 5 DG n 1 6 DC n 1 7 DG n 2 1 GLY n 2 2 SER n 2 3 HIS n 2 4 MET n 2 5 LEU n 2 6 SER n 2 7 THR n 2 8 GLY n 2 9 ASP n 2 10 ASN n 2 11 LEU n 2 12 GLU n 2 13 GLN n 2 14 LYS n 2 15 ILE n 2 16 LEU n 2 17 GLN n 2 18 VAL n 2 19 LEU n 2 20 SER n 2 21 ASP n 2 22 ASP n 2 23 GLY n 2 24 GLY n 2 25 PRO n 2 26 VAL n 2 27 ALA n 2 28 ILE n 2 29 PHE n 2 30 GLN n 2 31 LEU n 2 32 VAL n 2 33 LYS n 2 34 LYS n 2 35 CYS n 2 36 GLN n 2 37 VAL n 2 38 PRO n 2 39 LYS n 2 40 LYS n 2 41 THR n 2 42 LEU n 2 43 ASN n 2 44 GLN n 2 45 VAL n 2 46 LEU n 2 47 TYR n 2 48 ARG n 2 49 LEU n 2 50 LYS n 2 51 LYS n 2 52 GLU n 2 53 ASP n 2 54 ARG n 2 55 VAL n 2 56 SER n 2 57 SER n 2 58 PRO n 2 59 SER n 2 60 PRO n 2 61 LYS n 2 62 TYR n 2 63 TRP n 2 64 SER n 2 65 ILE n 2 66 GLY n 2 67 GLY n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus Mus _entity_src_gen.pdbx_gene_src_gene Zbp1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21-DE3 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28A _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP ZBP1_MOUSE Q9QY24 2 LSTGDNLEQKILQVLSDDGGPVKIGQLVKKCQVPKKTLNQVLYRLKKEDRVSSPEPATWSIGG 8 ? 2 PDB 2HEO 2HEO 1 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2HEO A 5 ? 67 ? Q9QY24 8 ? 70 ? 108 170 2 1 2HEO D 5 ? 67 ? Q9QY24 8 ? 70 ? 108 170 3 2 2HEO B 1 ? 7 ? 2HEO 200 ? 206 ? 200 206 4 2 2HEO E 1 ? 7 ? 2HEO 200 ? 206 ? 200 206 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2HEO GLY A 1 ? UNP Q9QY24 ? ? 'cloning artifact' 104 1 1 2HEO SER A 2 ? UNP Q9QY24 ? ? 'cloning artifact' 105 2 1 2HEO HIS A 3 ? UNP Q9QY24 ? ? 'cloning artifact' 106 3 1 2HEO MET A 4 ? UNP Q9QY24 ? ? 'cloning artifact' 107 4 1 2HEO ALA A 27 ? UNP Q9QY24 LYS 30 'engineered mutation' 130 5 1 2HEO PHE A 29 ? UNP Q9QY24 GLY 32 'engineered mutation' 132 6 1 2HEO SER A 59 ? UNP Q9QY24 GLU 62 'engineered mutation' 162 7 1 2HEO LYS A 61 ? UNP Q9QY24 ALA 64 'engineered mutation' 164 8 1 2HEO TYR A 62 ? UNP Q9QY24 THR 65 'engineered mutation' 165 9 2 2HEO GLY D 1 ? UNP Q9QY24 ? ? 'cloning artifact' 104 10 2 2HEO SER D 2 ? UNP Q9QY24 ? ? 'cloning artifact' 105 11 2 2HEO HIS D 3 ? UNP Q9QY24 ? ? 'cloning artifact' 106 12 2 2HEO MET D 4 ? UNP Q9QY24 ? ? 'cloning artifact' 107 13 2 2HEO ALA D 27 ? UNP Q9QY24 LYS 30 'engineered mutation' 130 14 2 2HEO PHE D 29 ? UNP Q9QY24 GLY 32 'engineered mutation' 132 15 2 2HEO SER D 59 ? UNP Q9QY24 GLU 62 'engineered mutation' 162 16 2 2HEO LYS D 61 ? UNP Q9QY24 ALA 64 'engineered mutation' 164 17 2 2HEO TYR D 62 ? UNP Q9QY24 THR 65 'engineered mutation' 165 18 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2HEO _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.64 _exptl_crystal.density_percent_sol 53.44 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details '25% PEG 4000, 0.2M Na/K phosphate, 0.1M MES, 5mM Bmercapto-ethanol, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'PEG 4000' ? ? ? 1 2 1 'Na/K phosphate' ? ? ? 1 3 1 MES ? ? ? 1 4 1 Bmercapto-ethanol ? ? ? 1 5 1 H2O ? ? ? 1 6 2 'PEG 4000' ? ? ? 1 7 2 'Na/K phosphate' ? ? ? 1 8 2 MES ? ? ? 1 9 2 Bmercapto-ethanol ? ? ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector ? _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date 2005-11-23 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.976 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID29' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID29 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.976 # _reflns.entry_id 2HEO _reflns.observed_criterion_sigma_F 1.0 _reflns.observed_criterion_sigma_I 1.0 _reflns.d_resolution_high 1.7 _reflns.d_resolution_low 65 _reflns.number_all ? _reflns.number_obs 22226 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.082 _reflns.pdbx_Rsym_value 0.082 _reflns.pdbx_netI_over_sigmaI 16.1 _reflns.B_iso_Wilson_estimate 25.8 _reflns.pdbx_redundancy 7.0 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.70 _reflns_shell.d_res_low 1.79 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.417 _reflns_shell.pdbx_Rsym_value 0.417 _reflns_shell.meanI_over_sigI_obs 3.1 _reflns_shell.pdbx_redundancy 7.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3227 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2HEO _refine.ls_number_reflns_obs 21057 _refine.ls_number_reflns_all 22241 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 1.70 _refine.ls_percent_reflns_obs 99.82 _refine.ls_R_factor_obs 0.248 _refine.ls_R_factor_all 0.2414 _refine.ls_R_factor_R_work 0.241 _refine.ls_R_factor_R_free 0.30507 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1129 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.928 _refine.correlation_coeff_Fo_to_Fc_free 0.880 _refine.B_iso_mean 34.061 _refine.aniso_B[1][1] 0.51 _refine.aniso_B[2][2] 0.51 _refine.aniso_B[3][3] -0.76 _refine.aniso_B[1][2] 0.25 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 1J75' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.127 _refine.pdbx_overall_ESU_R_Free 0.137 _refine.overall_SU_ML 0.128 _refine.overall_SU_B 7.467 _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 924 _refine_hist.pdbx_number_atoms_nucleic_acid 246 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 228 _refine_hist.number_atoms_total 1398 _refine_hist.d_res_high 1.70 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.013 0.022 ? 1235 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.007 2.253 ? 1712 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.198 5.000 ? 114 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 43.543 25.263 ? 38 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 18.332 15.000 ? 195 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 21.039 15.000 ? 5 'X-RAY DIFFRACTION' ? r_chiral_restr 0.158 0.200 ? 193 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.008 0.020 ? 813 'X-RAY DIFFRACTION' ? r_nbd_refined 0.277 0.200 ? 730 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.303 0.200 ? 819 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.219 0.200 ? 191 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.208 0.200 ? 46 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.268 0.200 ? 22 'X-RAY DIFFRACTION' ? r_mcbond_it 0.850 1.500 ? 604 'X-RAY DIFFRACTION' ? r_mcangle_it 1.314 2.000 ? 958 'X-RAY DIFFRACTION' ? r_scbond_it 2.002 3.000 ? 807 'X-RAY DIFFRACTION' ? r_scangle_it 2.695 4.500 ? 754 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.700 _refine_ls_shell.d_res_low 1.744 _refine_ls_shell.number_reflns_R_work 1525 _refine_ls_shell.R_factor_R_work 0.315 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.382 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 98 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2HEO _struct.title 'General Structure-Based Approach to the Design of Protein Ligands: Application to the Design of Kv1.2 Potassium Channel Blockers.' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2HEO _struct_keywords.pdbx_keywords 'Immune System/DNA' _struct_keywords.text 'PROTEIN DLM1-Z-DNA COMPLEX, Immune System-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? # _struct_biol.id 1 _struct_biol.details ;the biological assembly is dimer present in the asymmetric unit, no need to symmetry operations ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP C 9 ? GLY C 23 ? ASP A 112 GLY A 126 1 ? 15 HELX_P HELX_P2 2 ILE C 28 ? GLN C 36 ? ILE A 131 GLN A 139 1 ? 9 HELX_P HELX_P3 3 PRO C 38 ? GLU C 52 ? PRO A 141 GLU A 155 1 ? 15 HELX_P HELX_P4 4 LEU D 11 ? GLY D 23 ? LEU D 114 GLY D 126 1 ? 13 HELX_P HELX_P5 5 ILE D 28 ? GLN D 36 ? ILE D 131 GLN D 139 1 ? 9 HELX_P HELX_P6 6 PRO D 38 ? GLU D 52 ? PRO D 141 GLU D 155 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 7 N1 ? ? B DC 201 E DG 206 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 7 O6 ? ? B DC 201 E DG 206 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 7 N2 ? ? B DC 201 E DG 206 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 6 N3 ? ? B DG 202 E DC 205 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 6 O2 ? ? B DG 202 E DC 205 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 6 N4 ? ? B DG 202 E DC 205 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 4 N3 ? ? ? 1_555 B DG 5 N1 ? ? B DC 203 E DG 204 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 4 N4 ? ? ? 1_555 B DG 5 O6 ? ? B DC 203 E DG 204 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 4 O2 ? ? ? 1_555 B DG 5 N2 ? ? B DC 203 E DG 204 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 5 N1 ? ? ? 1_555 B DC 4 N3 ? ? B DG 204 E DC 203 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 5 N2 ? ? ? 1_555 B DC 4 O2 ? ? B DG 204 E DC 203 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 5 O6 ? ? ? 1_555 B DC 4 N4 ? ? B DG 204 E DC 203 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 3 N1 ? ? B DC 205 E DG 202 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 3 O6 ? ? B DC 205 E DG 202 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 3 N2 ? ? B DC 205 E DG 202 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 7 N1 ? ? ? 1_555 B DC 2 N3 ? ? B DG 206 E DC 201 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 7 N2 ? ? ? 1_555 B DC 2 O2 ? ? B DG 206 E DC 201 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 7 O6 ? ? ? 1_555 B DC 2 N4 ? ? B DG 206 E DC 201 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL C 26 ? ALA C 27 ? VAL A 129 ALA A 130 A 2 TYR C 62 ? ILE C 65 ? TYR A 165 ILE A 168 A 3 VAL C 55 ? SER C 59 ? VAL A 158 SER A 162 B 1 VAL D 26 ? ALA D 27 ? VAL D 129 ALA D 130 B 2 TYR D 62 ? ILE D 65 ? TYR D 165 ILE D 168 B 3 VAL D 55 ? SER D 56 ? VAL D 158 SER D 159 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL C 26 ? N VAL A 129 O TRP C 63 ? O TRP A 166 A 2 3 O SER C 64 ? O SER A 167 N SER C 56 ? N SER A 159 B 1 2 N VAL D 26 ? N VAL D 129 O TRP D 63 ? O TRP D 166 B 2 3 O SER D 64 ? O SER D 167 N SER D 56 ? N SER D 159 # _database_PDB_matrix.entry_id 2HEO _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2HEO _atom_sites.fract_transf_matrix[1][1] 0.012514 _atom_sites.fract_transf_matrix[1][2] 0.007225 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014450 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018072 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 200 ? ? ? B . n A 1 2 DC 2 201 201 DC C B . n A 1 3 DG 3 202 202 DG G B . n A 1 4 DC 4 203 203 DC C B . n A 1 5 DG 5 204 204 DG G B . n A 1 6 DC 6 205 205 DC C B . n A 1 7 DG 7 206 206 DG G B . n B 1 1 DT 1 200 ? ? ? E . n B 1 2 DC 2 201 201 DC C E . n B 1 3 DG 3 202 202 DG G E . n B 1 4 DC 4 203 203 DC C E . n B 1 5 DG 5 204 204 DG G E . n B 1 6 DC 6 205 205 DC C E . n B 1 7 DG 7 206 206 DG G E . n C 2 1 GLY 1 104 ? ? ? A . n C 2 2 SER 2 105 ? ? ? A . n C 2 3 HIS 3 106 ? ? ? A . n C 2 4 MET 4 107 ? ? ? A . n C 2 5 LEU 5 108 ? ? ? A . n C 2 6 SER 6 109 ? ? ? A . n C 2 7 THR 7 110 ? ? ? A . n C 2 8 GLY 8 111 ? ? ? A . n C 2 9 ASP 9 112 112 ASP ASP A . n C 2 10 ASN 10 113 113 ASN ASN A . n C 2 11 LEU 11 114 114 LEU LEU A . n C 2 12 GLU 12 115 115 GLU GLU A . n C 2 13 GLN 13 116 116 GLN GLN A . n C 2 14 LYS 14 117 117 LYS LYS A . n C 2 15 ILE 15 118 118 ILE ILE A . n C 2 16 LEU 16 119 119 LEU LEU A . n C 2 17 GLN 17 120 120 GLN GLN A . n C 2 18 VAL 18 121 121 VAL VAL A . n C 2 19 LEU 19 122 122 LEU LEU A . n C 2 20 SER 20 123 123 SER SER A . n C 2 21 ASP 21 124 124 ASP ASP A . n C 2 22 ASP 22 125 125 ASP ASP A . n C 2 23 GLY 23 126 126 GLY GLY A . n C 2 24 GLY 24 127 127 GLY GLY A . n C 2 25 PRO 25 128 128 PRO PRO A . n C 2 26 VAL 26 129 129 VAL VAL A . n C 2 27 ALA 27 130 130 ALA ALA A . n C 2 28 ILE 28 131 131 ILE ILE A . n C 2 29 PHE 29 132 132 PHE PHE A . n C 2 30 GLN 30 133 133 GLN GLN A . n C 2 31 LEU 31 134 134 LEU LEU A . n C 2 32 VAL 32 135 135 VAL VAL A . n C 2 33 LYS 33 136 136 LYS LYS A . n C 2 34 LYS 34 137 137 LYS LYS A . n C 2 35 CYS 35 138 138 CYS CYS A . n C 2 36 GLN 36 139 139 GLN GLN A . n C 2 37 VAL 37 140 140 VAL VAL A . n C 2 38 PRO 38 141 141 PRO PRO A . n C 2 39 LYS 39 142 142 LYS LYS A . n C 2 40 LYS 40 143 143 LYS LYS A . n C 2 41 THR 41 144 144 THR THR A . n C 2 42 LEU 42 145 145 LEU LEU A . n C 2 43 ASN 43 146 146 ASN ASN A . n C 2 44 GLN 44 147 147 GLN GLN A . n C 2 45 VAL 45 148 148 VAL VAL A . n C 2 46 LEU 46 149 149 LEU LEU A . n C 2 47 TYR 47 150 150 TYR TYR A . n C 2 48 ARG 48 151 151 ARG ARG A . n C 2 49 LEU 49 152 152 LEU LEU A . n C 2 50 LYS 50 153 153 LYS LYS A . n C 2 51 LYS 51 154 154 LYS LYS A . n C 2 52 GLU 52 155 155 GLU GLU A . n C 2 53 ASP 53 156 156 ASP ASP A . n C 2 54 ARG 54 157 157 ARG ARG A . n C 2 55 VAL 55 158 158 VAL VAL A . n C 2 56 SER 56 159 159 SER SER A . n C 2 57 SER 57 160 160 SER SER A . n C 2 58 PRO 58 161 161 PRO PRO A . n C 2 59 SER 59 162 162 SER SER A . n C 2 60 PRO 60 163 163 PRO PRO A . n C 2 61 LYS 61 164 164 LYS LYS A . n C 2 62 TYR 62 165 165 TYR TYR A . n C 2 63 TRP 63 166 166 TRP TRP A . n C 2 64 SER 64 167 167 SER SER A . n C 2 65 ILE 65 168 168 ILE ILE A . n C 2 66 GLY 66 169 169 GLY GLY A . n C 2 67 GLY 67 170 170 GLY GLY A . n D 2 1 GLY 1 104 ? ? ? D . n D 2 2 SER 2 105 ? ? ? D . n D 2 3 HIS 3 106 ? ? ? D . n D 2 4 MET 4 107 ? ? ? D . n D 2 5 LEU 5 108 ? ? ? D . n D 2 6 SER 6 109 ? ? ? D . n D 2 7 THR 7 110 ? ? ? D . n D 2 8 GLY 8 111 ? ? ? D . n D 2 9 ASP 9 112 112 ASP ASP D . n D 2 10 ASN 10 113 113 ASN ASN D . n D 2 11 LEU 11 114 114 LEU LEU D . n D 2 12 GLU 12 115 115 GLU GLU D . n D 2 13 GLN 13 116 116 GLN GLN D . n D 2 14 LYS 14 117 117 LYS LYS D . n D 2 15 ILE 15 118 118 ILE ILE D . n D 2 16 LEU 16 119 119 LEU LEU D . n D 2 17 GLN 17 120 120 GLN GLN D . n D 2 18 VAL 18 121 121 VAL VAL D . n D 2 19 LEU 19 122 122 LEU LEU D . n D 2 20 SER 20 123 123 SER SER D . n D 2 21 ASP 21 124 124 ASP ASP D . n D 2 22 ASP 22 125 125 ASP ASP D . n D 2 23 GLY 23 126 126 GLY GLY D . n D 2 24 GLY 24 127 127 GLY GLY D . n D 2 25 PRO 25 128 128 PRO PRO D . n D 2 26 VAL 26 129 129 VAL VAL D . n D 2 27 ALA 27 130 130 ALA ALA D . n D 2 28 ILE 28 131 131 ILE ILE D . n D 2 29 PHE 29 132 132 PHE PHE D . n D 2 30 GLN 30 133 133 GLN GLN D . n D 2 31 LEU 31 134 134 LEU LEU D . n D 2 32 VAL 32 135 135 VAL VAL D . n D 2 33 LYS 33 136 136 LYS LYS D . n D 2 34 LYS 34 137 137 LYS LYS D . n D 2 35 CYS 35 138 138 CYS CYS D . n D 2 36 GLN 36 139 139 GLN GLN D . n D 2 37 VAL 37 140 140 VAL VAL D . n D 2 38 PRO 38 141 141 PRO PRO D . n D 2 39 LYS 39 142 142 LYS LYS D . n D 2 40 LYS 40 143 143 LYS LYS D . n D 2 41 THR 41 144 144 THR THR D . n D 2 42 LEU 42 145 145 LEU LEU D . n D 2 43 ASN 43 146 146 ASN ASN D . n D 2 44 GLN 44 147 147 GLN GLN D . n D 2 45 VAL 45 148 148 VAL VAL D . n D 2 46 LEU 46 149 149 LEU LEU D . n D 2 47 TYR 47 150 150 TYR TYR D . n D 2 48 ARG 48 151 151 ARG ARG D . n D 2 49 LEU 49 152 152 LEU LEU D . n D 2 50 LYS 50 153 153 LYS LYS D . n D 2 51 LYS 51 154 154 LYS LYS D . n D 2 52 GLU 52 155 155 GLU GLU D . n D 2 53 ASP 53 156 156 ASP ASP D . n D 2 54 ARG 54 157 157 ARG ARG D . n D 2 55 VAL 55 158 158 VAL VAL D . n D 2 56 SER 56 159 159 SER SER D . n D 2 57 SER 57 160 160 SER SER D . n D 2 58 PRO 58 161 161 PRO PRO D . n D 2 59 SER 59 162 162 SER SER D . n D 2 60 PRO 60 163 163 PRO PRO D . n D 2 61 LYS 61 164 164 LYS LYS D . n D 2 62 TYR 62 165 165 TYR TYR D . n D 2 63 TRP 63 166 166 TRP TRP D . n D 2 64 SER 64 167 167 SER SER D . n D 2 65 ILE 65 168 168 ILE ILE D . n D 2 66 GLY 66 169 169 GLY GLY D . n D 2 67 GLY 67 170 ? ? ? D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HOH 1 1 1 HOH HOH B . E 3 HOH 2 5 5 HOH HOH B . E 3 HOH 3 12 12 HOH HOH B . E 3 HOH 4 14 14 HOH HOH B . E 3 HOH 5 15 15 HOH HOH B . E 3 HOH 6 16 16 HOH HOH B . E 3 HOH 7 17 17 HOH HOH B . E 3 HOH 8 21 21 HOH HOH B . E 3 HOH 9 22 22 HOH HOH B . E 3 HOH 10 25 25 HOH HOH B . E 3 HOH 11 26 26 HOH HOH B . E 3 HOH 12 35 35 HOH HOH B . E 3 HOH 13 50 50 HOH HOH B . E 3 HOH 14 56 56 HOH HOH B . E 3 HOH 15 69 69 HOH HOH B . E 3 HOH 16 86 86 HOH HOH B . E 3 HOH 17 96 96 HOH HOH B . E 3 HOH 18 98 98 HOH HOH B . E 3 HOH 19 101 101 HOH HOH B . E 3 HOH 20 104 104 HOH HOH B . E 3 HOH 21 110 110 HOH HOH B . E 3 HOH 22 124 124 HOH HOH B . E 3 HOH 23 155 155 HOH HOH B . E 3 HOH 24 163 163 HOH HOH B . E 3 HOH 25 164 164 HOH HOH B . E 3 HOH 26 165 165 HOH HOH B . E 3 HOH 27 166 166 HOH HOH B . E 3 HOH 28 175 175 HOH HOH B . E 3 HOH 29 183 183 HOH HOH B . E 3 HOH 30 189 189 HOH HOH B . E 3 HOH 31 215 215 HOH HOH B . E 3 HOH 32 224 224 HOH HOH B . F 3 HOH 1 39 39 HOH HOH E . F 3 HOH 2 46 46 HOH HOH E . F 3 HOH 3 49 49 HOH HOH E . F 3 HOH 4 52 52 HOH HOH E . F 3 HOH 5 54 54 HOH HOH E . F 3 HOH 6 55 55 HOH HOH E . F 3 HOH 7 58 58 HOH HOH E . F 3 HOH 8 59 59 HOH HOH E . F 3 HOH 9 78 78 HOH HOH E . F 3 HOH 10 82 82 HOH HOH E . F 3 HOH 11 87 87 HOH HOH E . F 3 HOH 12 100 100 HOH HOH E . F 3 HOH 13 102 102 HOH HOH E . F 3 HOH 14 108 108 HOH HOH E . F 3 HOH 15 112 112 HOH HOH E . F 3 HOH 16 115 115 HOH HOH E . F 3 HOH 17 117 117 HOH HOH E . F 3 HOH 18 121 121 HOH HOH E . F 3 HOH 19 122 122 HOH HOH E . F 3 HOH 20 125 125 HOH HOH E . F 3 HOH 21 139 139 HOH HOH E . F 3 HOH 22 151 151 HOH HOH E . F 3 HOH 23 181 181 HOH HOH E . F 3 HOH 24 194 194 HOH HOH E . F 3 HOH 25 207 207 HOH HOH E . F 3 HOH 26 210 210 HOH HOH E . F 3 HOH 27 211 211 HOH HOH E . F 3 HOH 28 232 232 HOH HOH E . F 3 HOH 29 233 233 HOH HOH E . G 3 HOH 1 171 2 HOH HOH A . G 3 HOH 2 172 3 HOH HOH A . G 3 HOH 3 173 4 HOH HOH A . G 3 HOH 4 174 7 HOH HOH A . G 3 HOH 5 175 8 HOH HOH A . G 3 HOH 6 176 9 HOH HOH A . G 3 HOH 7 177 10 HOH HOH A . G 3 HOH 8 178 11 HOH HOH A . G 3 HOH 9 179 13 HOH HOH A . G 3 HOH 10 180 18 HOH HOH A . G 3 HOH 11 181 19 HOH HOH A . G 3 HOH 12 182 24 HOH HOH A . G 3 HOH 13 183 27 HOH HOH A . G 3 HOH 14 184 28 HOH HOH A . G 3 HOH 15 185 29 HOH HOH A . G 3 HOH 16 186 30 HOH HOH A . G 3 HOH 17 187 31 HOH HOH A . G 3 HOH 18 188 32 HOH HOH A . G 3 HOH 19 189 33 HOH HOH A . G 3 HOH 20 190 34 HOH HOH A . G 3 HOH 21 191 36 HOH HOH A . G 3 HOH 22 192 37 HOH HOH A . G 3 HOH 23 193 60 HOH HOH A . G 3 HOH 24 194 66 HOH HOH A . G 3 HOH 25 195 67 HOH HOH A . G 3 HOH 26 196 70 HOH HOH A . G 3 HOH 27 197 73 HOH HOH A . G 3 HOH 28 198 74 HOH HOH A . G 3 HOH 29 199 75 HOH HOH A . G 3 HOH 30 200 79 HOH HOH A . G 3 HOH 31 201 80 HOH HOH A . G 3 HOH 32 202 81 HOH HOH A . G 3 HOH 33 203 84 HOH HOH A . G 3 HOH 34 204 85 HOH HOH A . G 3 HOH 35 205 90 HOH HOH A . G 3 HOH 36 206 92 HOH HOH A . G 3 HOH 37 207 95 HOH HOH A . G 3 HOH 38 208 97 HOH HOH A . G 3 HOH 39 209 99 HOH HOH A . G 3 HOH 40 210 106 HOH HOH A . G 3 HOH 41 211 109 HOH HOH A . G 3 HOH 42 212 111 HOH HOH A . G 3 HOH 43 213 116 HOH HOH A . G 3 HOH 44 214 118 HOH HOH A . G 3 HOH 45 215 119 HOH HOH A . G 3 HOH 46 216 120 HOH HOH A . G 3 HOH 47 217 123 HOH HOH A . G 3 HOH 48 218 126 HOH HOH A . G 3 HOH 49 219 127 HOH HOH A . G 3 HOH 50 220 131 HOH HOH A . G 3 HOH 51 221 135 HOH HOH A . G 3 HOH 52 222 137 HOH HOH A . G 3 HOH 53 223 138 HOH HOH A . G 3 HOH 54 224 143 HOH HOH A . G 3 HOH 55 225 144 HOH HOH A . G 3 HOH 56 226 145 HOH HOH A . G 3 HOH 57 227 147 HOH HOH A . G 3 HOH 58 228 150 HOH HOH A . G 3 HOH 59 229 153 HOH HOH A . G 3 HOH 60 230 157 HOH HOH A . G 3 HOH 61 231 161 HOH HOH A . G 3 HOH 62 232 172 HOH HOH A . G 3 HOH 63 233 178 HOH HOH A . G 3 HOH 64 234 180 HOH HOH A . G 3 HOH 65 235 182 HOH HOH A . G 3 HOH 66 236 188 HOH HOH A . G 3 HOH 67 237 190 HOH HOH A . G 3 HOH 68 238 192 HOH HOH A . G 3 HOH 69 239 195 HOH HOH A . G 3 HOH 70 240 196 HOH HOH A . G 3 HOH 71 241 198 HOH HOH A . G 3 HOH 72 242 203 HOH HOH A . G 3 HOH 73 243 206 HOH HOH A . G 3 HOH 74 244 208 HOH HOH A . G 3 HOH 75 245 209 HOH HOH A . G 3 HOH 76 246 212 HOH HOH A . G 3 HOH 77 247 214 HOH HOH A . G 3 HOH 78 248 216 HOH HOH A . G 3 HOH 79 249 217 HOH HOH A . G 3 HOH 80 250 218 HOH HOH A . G 3 HOH 81 251 219 HOH HOH A . G 3 HOH 82 252 221 HOH HOH A . G 3 HOH 83 253 227 HOH HOH A . H 3 HOH 1 171 20 HOH HOH D . H 3 HOH 2 172 23 HOH HOH D . H 3 HOH 3 173 38 HOH HOH D . H 3 HOH 4 174 40 HOH HOH D . H 3 HOH 5 175 41 HOH HOH D . H 3 HOH 6 176 42 HOH HOH D . H 3 HOH 7 177 43 HOH HOH D . H 3 HOH 8 178 44 HOH HOH D . H 3 HOH 9 179 45 HOH HOH D . H 3 HOH 10 180 47 HOH HOH D . H 3 HOH 11 181 48 HOH HOH D . H 3 HOH 12 182 51 HOH HOH D . H 3 HOH 13 183 53 HOH HOH D . H 3 HOH 14 184 57 HOH HOH D . H 3 HOH 15 185 61 HOH HOH D . H 3 HOH 16 186 62 HOH HOH D . H 3 HOH 17 187 63 HOH HOH D . H 3 HOH 18 188 64 HOH HOH D . H 3 HOH 19 189 65 HOH HOH D . H 3 HOH 20 190 68 HOH HOH D . H 3 HOH 21 191 71 HOH HOH D . H 3 HOH 22 192 72 HOH HOH D . H 3 HOH 23 193 76 HOH HOH D . H 3 HOH 24 194 77 HOH HOH D . H 3 HOH 25 195 83 HOH HOH D . H 3 HOH 26 196 88 HOH HOH D . H 3 HOH 27 197 89 HOH HOH D . H 3 HOH 28 198 91 HOH HOH D . H 3 HOH 29 199 93 HOH HOH D . H 3 HOH 30 200 94 HOH HOH D . H 3 HOH 31 201 103 HOH HOH D . H 3 HOH 32 202 105 HOH HOH D . H 3 HOH 33 203 107 HOH HOH D . H 3 HOH 34 204 113 HOH HOH D . H 3 HOH 35 205 114 HOH HOH D . H 3 HOH 36 206 128 HOH HOH D . H 3 HOH 37 207 129 HOH HOH D . H 3 HOH 38 208 130 HOH HOH D . H 3 HOH 39 209 132 HOH HOH D . H 3 HOH 40 210 133 HOH HOH D . H 3 HOH 41 211 134 HOH HOH D . H 3 HOH 42 212 136 HOH HOH D . H 3 HOH 43 213 140 HOH HOH D . H 3 HOH 44 214 141 HOH HOH D . H 3 HOH 45 215 142 HOH HOH D . H 3 HOH 46 216 146 HOH HOH D . H 3 HOH 47 217 148 HOH HOH D . H 3 HOH 48 218 149 HOH HOH D . H 3 HOH 49 219 152 HOH HOH D . H 3 HOH 50 220 154 HOH HOH D . H 3 HOH 51 221 156 HOH HOH D . H 3 HOH 52 222 158 HOH HOH D . H 3 HOH 53 223 159 HOH HOH D . H 3 HOH 54 224 160 HOH HOH D . H 3 HOH 55 225 162 HOH HOH D . H 3 HOH 56 226 167 HOH HOH D . H 3 HOH 57 227 168 HOH HOH D . H 3 HOH 58 228 169 HOH HOH D . H 3 HOH 59 229 170 HOH HOH D . H 3 HOH 60 230 171 HOH HOH D . H 3 HOH 61 231 173 HOH HOH D . H 3 HOH 62 232 174 HOH HOH D . H 3 HOH 63 233 177 HOH HOH D . H 3 HOH 64 234 184 HOH HOH D . H 3 HOH 65 235 185 HOH HOH D . H 3 HOH 66 236 186 HOH HOH D . H 3 HOH 67 237 187 HOH HOH D . H 3 HOH 68 238 191 HOH HOH D . H 3 HOH 69 239 193 HOH HOH D . H 3 HOH 70 240 197 HOH HOH D . H 3 HOH 71 241 199 HOH HOH D . H 3 HOH 72 242 200 HOH HOH D . H 3 HOH 73 243 201 HOH HOH D . H 3 HOH 74 244 202 HOH HOH D . H 3 HOH 75 245 205 HOH HOH D . H 3 HOH 76 246 213 HOH HOH D . H 3 HOH 77 247 220 HOH HOH D . H 3 HOH 78 248 223 HOH HOH D . H 3 HOH 79 249 225 HOH HOH D . H 3 HOH 80 250 226 HOH HOH D . H 3 HOH 81 251 228 HOH HOH D . H 3 HOH 82 252 229 HOH HOH D . H 3 HOH 83 253 230 HOH HOH D . H 3 HOH 84 254 231 HOH HOH D . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-11-21 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-10-20 5 'Structure model' 1 4 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Database references' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' struct_ref_seq_dif 3 5 'Structure model' chem_comp_atom 4 5 'Structure model' chem_comp_bond 5 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined -10.9450 69.8010 -2.5230 -0.0333 -0.1507 -0.2056 0.0195 0.0263 0.0108 5.5439 4.8850 3.1376 -2.4320 -1.2204 0.3617 0.3027 0.2839 0.1433 -0.4773 -0.2308 0.0914 -0.1511 -0.1384 -0.0718 'X-RAY DIFFRACTION' 2 ? refined -14.9640 58.6000 6.4410 -0.0643 -0.1165 -0.1568 -0.0439 -0.0364 -0.0490 1.5924 6.0610 6.2215 1.6171 -1.6488 2.7918 -0.0011 0.1437 -0.1477 0.1039 0.1599 -0.1407 0.2594 0.1657 -0.1589 'X-RAY DIFFRACTION' 3 ? refined -24.4890 46.6330 20.9630 -0.0769 -0.0686 -0.1955 -0.0013 0.0030 0.0026 3.9111 3.3464 4.7423 0.4782 -0.0850 -0.5264 -0.0644 -0.2480 0.1776 0.1388 0.0543 0.2042 -0.2691 -0.2335 0.0101 'X-RAY DIFFRACTION' 4 ? refined -16.8820 55.3800 11.5240 -0.0289 -0.1289 -0.1689 -0.0258 -0.0303 -0.0443 1.5670 6.1947 10.1610 1.4594 1.9147 3.5687 -0.1990 0.1195 0.0965 0.3590 0.1872 -0.1113 0.2678 0.1207 0.0118 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 113 C 10 A 170 C 67 ? 'X-RAY DIFFRACTION' ? 2 2 B 201 A 2 B 206 A 7 ? 'X-RAY DIFFRACTION' ? 3 3 D 113 D 10 D 169 D 66 ? 'X-RAY DIFFRACTION' ? 4 4 E 201 B 2 E 206 B 7 ? 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0005 ? 1 MOLREP phasing . ? 2 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O E HOH 82 ? ? O E HOH 211 ? ? 2.14 2 1 N7 E DG 206 ? ? O E HOH 210 ? ? 2.16 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 B _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 175 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 D _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 219 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 6_665 _pdbx_validate_symm_contact.dist 2.15 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 C _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 LEU _pdbx_validate_rmsd_bond.auth_seq_id_1 152 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 N _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 LYS _pdbx_validate_rmsd_bond.auth_seq_id_2 153 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.522 _pdbx_validate_rmsd_bond.bond_target_value 1.336 _pdbx_validate_rmsd_bond.bond_deviation 0.186 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.023 _pdbx_validate_rmsd_bond.linker_flag Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DG 202 ? ? "C1'" B DG 202 ? ? N9 B DG 202 ? ? 110.53 108.30 2.23 0.30 N 2 1 "O4'" B DC 203 ? ? "C1'" B DC 203 ? ? N1 B DC 203 ? ? 111.08 108.30 2.78 0.30 N 3 1 "O4'" B DG 204 ? ? "C1'" B DG 204 ? ? N9 B DG 204 ? ? 101.52 108.00 -6.48 0.70 N 4 1 N9 B DG 204 ? ? C4 B DG 204 ? ? C5 B DG 204 ? ? 107.93 105.40 2.53 0.40 N 5 1 N3 B DG 204 ? ? C2 B DG 204 ? ? N2 B DG 204 ? ? 115.35 119.90 -4.55 0.70 N 6 1 OP1 E DC 201 ? ? P E DC 201 ? ? OP2 E DC 201 ? ? 133.01 119.60 13.41 1.50 N 7 1 "O4'" E DG 204 ? ? "C1'" E DG 204 ? ? N9 E DG 204 ? ? 101.21 108.00 -6.79 0.70 N 8 1 "C3'" E DC 205 ? ? "C2'" E DC 205 ? ? "C1'" E DC 205 ? ? 96.98 102.40 -5.42 0.80 N 9 1 CA A LEU 152 ? ? C A LEU 152 ? ? N A LYS 153 ? ? 133.65 117.20 16.45 2.20 Y 10 1 O A LEU 152 ? ? C A LEU 152 ? ? N A LYS 153 ? ? 104.83 122.70 -17.87 1.60 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 164 ? ? 83.98 -10.89 2 1 LEU D 114 ? ? 176.80 -14.37 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 112 ? CG ? C ASP 9 CG 2 1 Y 1 A ASP 112 ? OD1 ? C ASP 9 OD1 3 1 Y 1 A ASP 112 ? OD2 ? C ASP 9 OD2 4 1 Y 1 D LYS 117 ? CE ? D LYS 14 CE 5 1 Y 1 D LYS 117 ? NZ ? D LYS 14 NZ 6 1 Y 1 D LYS 153 ? CG ? D LYS 50 CG 7 1 Y 1 D LYS 153 ? CD ? D LYS 50 CD 8 1 Y 1 D LYS 153 ? CE ? D LYS 50 CE 9 1 Y 1 D LYS 153 ? NZ ? D LYS 50 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B DT 200 ? A DT 1 2 1 Y 1 E DT 200 ? B DT 1 3 1 Y 1 A GLY 104 ? C GLY 1 4 1 Y 1 A SER 105 ? C SER 2 5 1 Y 1 A HIS 106 ? C HIS 3 6 1 Y 1 A MET 107 ? C MET 4 7 1 Y 1 A LEU 108 ? C LEU 5 8 1 Y 1 A SER 109 ? C SER 6 9 1 Y 1 A THR 110 ? C THR 7 10 1 Y 1 A GLY 111 ? C GLY 8 11 1 Y 1 D GLY 104 ? D GLY 1 12 1 Y 1 D SER 105 ? D SER 2 13 1 Y 1 D HIS 106 ? D HIS 3 14 1 Y 1 D MET 107 ? D MET 4 15 1 Y 1 D LEU 108 ? D LEU 5 16 1 Y 1 D SER 109 ? D SER 6 17 1 Y 1 D THR 110 ? D THR 7 18 1 Y 1 D GLY 111 ? D GLY 8 19 1 Y 1 D GLY 170 ? D GLY 67 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DC OP3 O N N 88 DC P P N N 89 DC OP1 O N N 90 DC OP2 O N N 91 DC "O5'" O N N 92 DC "C5'" C N N 93 DC "C4'" C N R 94 DC "O4'" O N N 95 DC "C3'" C N S 96 DC "O3'" O N N 97 DC "C2'" C N N 98 DC "C1'" C N R 99 DC N1 N N N 100 DC C2 C N N 101 DC O2 O N N 102 DC N3 N N N 103 DC C4 C N N 104 DC N4 N N N 105 DC C5 C N N 106 DC C6 C N N 107 DC HOP3 H N N 108 DC HOP2 H N N 109 DC "H5'" H N N 110 DC "H5''" H N N 111 DC "H4'" H N N 112 DC "H3'" H N N 113 DC "HO3'" H N N 114 DC "H2'" H N N 115 DC "H2''" H N N 116 DC "H1'" H N N 117 DC H41 H N N 118 DC H42 H N N 119 DC H5 H N N 120 DC H6 H N N 121 DG OP3 O N N 122 DG P P N N 123 DG OP1 O N N 124 DG OP2 O N N 125 DG "O5'" O N N 126 DG "C5'" C N N 127 DG "C4'" C N R 128 DG "O4'" O N N 129 DG "C3'" C N S 130 DG "O3'" O N N 131 DG "C2'" C N N 132 DG "C1'" C N R 133 DG N9 N Y N 134 DG C8 C Y N 135 DG N7 N Y N 136 DG C5 C Y N 137 DG C6 C N N 138 DG O6 O N N 139 DG N1 N N N 140 DG C2 C N N 141 DG N2 N N N 142 DG N3 N N N 143 DG C4 C Y N 144 DG HOP3 H N N 145 DG HOP2 H N N 146 DG "H5'" H N N 147 DG "H5''" H N N 148 DG "H4'" H N N 149 DG "H3'" H N N 150 DG "HO3'" H N N 151 DG "H2'" H N N 152 DG "H2''" H N N 153 DG "H1'" H N N 154 DG H8 H N N 155 DG H1 H N N 156 DG H21 H N N 157 DG H22 H N N 158 DT OP3 O N N 159 DT P P N N 160 DT OP1 O N N 161 DT OP2 O N N 162 DT "O5'" O N N 163 DT "C5'" C N N 164 DT "C4'" C N R 165 DT "O4'" O N N 166 DT "C3'" C N S 167 DT "O3'" O N N 168 DT "C2'" C N N 169 DT "C1'" C N R 170 DT N1 N N N 171 DT C2 C N N 172 DT O2 O N N 173 DT N3 N N N 174 DT C4 C N N 175 DT O4 O N N 176 DT C5 C N N 177 DT C7 C N N 178 DT C6 C N N 179 DT HOP3 H N N 180 DT HOP2 H N N 181 DT "H5'" H N N 182 DT "H5''" H N N 183 DT "H4'" H N N 184 DT "H3'" H N N 185 DT "HO3'" H N N 186 DT "H2'" H N N 187 DT "H2''" H N N 188 DT "H1'" H N N 189 DT H3 H N N 190 DT H71 H N N 191 DT H72 H N N 192 DT H73 H N N 193 DT H6 H N N 194 GLN N N N N 195 GLN CA C N S 196 GLN C C N N 197 GLN O O N N 198 GLN CB C N N 199 GLN CG C N N 200 GLN CD C N N 201 GLN OE1 O N N 202 GLN NE2 N N N 203 GLN OXT O N N 204 GLN H H N N 205 GLN H2 H N N 206 GLN HA H N N 207 GLN HB2 H N N 208 GLN HB3 H N N 209 GLN HG2 H N N 210 GLN HG3 H N N 211 GLN HE21 H N N 212 GLN HE22 H N N 213 GLN HXT H N N 214 GLU N N N N 215 GLU CA C N S 216 GLU C C N N 217 GLU O O N N 218 GLU CB C N N 219 GLU CG C N N 220 GLU CD C N N 221 GLU OE1 O N N 222 GLU OE2 O N N 223 GLU OXT O N N 224 GLU H H N N 225 GLU H2 H N N 226 GLU HA H N N 227 GLU HB2 H N N 228 GLU HB3 H N N 229 GLU HG2 H N N 230 GLU HG3 H N N 231 GLU HE2 H N N 232 GLU HXT H N N 233 GLY N N N N 234 GLY CA C N N 235 GLY C C N N 236 GLY O O N N 237 GLY OXT O N N 238 GLY H H N N 239 GLY H2 H N N 240 GLY HA2 H N N 241 GLY HA3 H N N 242 GLY HXT H N N 243 HIS N N N N 244 HIS CA C N S 245 HIS C C N N 246 HIS O O N N 247 HIS CB C N N 248 HIS CG C Y N 249 HIS ND1 N Y N 250 HIS CD2 C Y N 251 HIS CE1 C Y N 252 HIS NE2 N Y N 253 HIS OXT O N N 254 HIS H H N N 255 HIS H2 H N N 256 HIS HA H N N 257 HIS HB2 H N N 258 HIS HB3 H N N 259 HIS HD1 H N N 260 HIS HD2 H N N 261 HIS HE1 H N N 262 HIS HE2 H N N 263 HIS HXT H N N 264 HOH O O N N 265 HOH H1 H N N 266 HOH H2 H N N 267 ILE N N N N 268 ILE CA C N S 269 ILE C C N N 270 ILE O O N N 271 ILE CB C N S 272 ILE CG1 C N N 273 ILE CG2 C N N 274 ILE CD1 C N N 275 ILE OXT O N N 276 ILE H H N N 277 ILE H2 H N N 278 ILE HA H N N 279 ILE HB H N N 280 ILE HG12 H N N 281 ILE HG13 H N N 282 ILE HG21 H N N 283 ILE HG22 H N N 284 ILE HG23 H N N 285 ILE HD11 H N N 286 ILE HD12 H N N 287 ILE HD13 H N N 288 ILE HXT H N N 289 LEU N N N N 290 LEU CA C N S 291 LEU C C N N 292 LEU O O N N 293 LEU CB C N N 294 LEU CG C N N 295 LEU CD1 C N N 296 LEU CD2 C N N 297 LEU OXT O N N 298 LEU H H N N 299 LEU H2 H N N 300 LEU HA H N N 301 LEU HB2 H N N 302 LEU HB3 H N N 303 LEU HG H N N 304 LEU HD11 H N N 305 LEU HD12 H N N 306 LEU HD13 H N N 307 LEU HD21 H N N 308 LEU HD22 H N N 309 LEU HD23 H N N 310 LEU HXT H N N 311 LYS N N N N 312 LYS CA C N S 313 LYS C C N N 314 LYS O O N N 315 LYS CB C N N 316 LYS CG C N N 317 LYS CD C N N 318 LYS CE C N N 319 LYS NZ N N N 320 LYS OXT O N N 321 LYS H H N N 322 LYS H2 H N N 323 LYS HA H N N 324 LYS HB2 H N N 325 LYS HB3 H N N 326 LYS HG2 H N N 327 LYS HG3 H N N 328 LYS HD2 H N N 329 LYS HD3 H N N 330 LYS HE2 H N N 331 LYS HE3 H N N 332 LYS HZ1 H N N 333 LYS HZ2 H N N 334 LYS HZ3 H N N 335 LYS HXT H N N 336 MET N N N N 337 MET CA C N S 338 MET C C N N 339 MET O O N N 340 MET CB C N N 341 MET CG C N N 342 MET SD S N N 343 MET CE C N N 344 MET OXT O N N 345 MET H H N N 346 MET H2 H N N 347 MET HA H N N 348 MET HB2 H N N 349 MET HB3 H N N 350 MET HG2 H N N 351 MET HG3 H N N 352 MET HE1 H N N 353 MET HE2 H N N 354 MET HE3 H N N 355 MET HXT H N N 356 PHE N N N N 357 PHE CA C N S 358 PHE C C N N 359 PHE O O N N 360 PHE CB C N N 361 PHE CG C Y N 362 PHE CD1 C Y N 363 PHE CD2 C Y N 364 PHE CE1 C Y N 365 PHE CE2 C Y N 366 PHE CZ C Y N 367 PHE OXT O N N 368 PHE H H N N 369 PHE H2 H N N 370 PHE HA H N N 371 PHE HB2 H N N 372 PHE HB3 H N N 373 PHE HD1 H N N 374 PHE HD2 H N N 375 PHE HE1 H N N 376 PHE HE2 H N N 377 PHE HZ H N N 378 PHE HXT H N N 379 PRO N N N N 380 PRO CA C N S 381 PRO C C N N 382 PRO O O N N 383 PRO CB C N N 384 PRO CG C N N 385 PRO CD C N N 386 PRO OXT O N N 387 PRO H H N N 388 PRO HA H N N 389 PRO HB2 H N N 390 PRO HB3 H N N 391 PRO HG2 H N N 392 PRO HG3 H N N 393 PRO HD2 H N N 394 PRO HD3 H N N 395 PRO HXT H N N 396 SER N N N N 397 SER CA C N S 398 SER C C N N 399 SER O O N N 400 SER CB C N N 401 SER OG O N N 402 SER OXT O N N 403 SER H H N N 404 SER H2 H N N 405 SER HA H N N 406 SER HB2 H N N 407 SER HB3 H N N 408 SER HG H N N 409 SER HXT H N N 410 THR N N N N 411 THR CA C N S 412 THR C C N N 413 THR O O N N 414 THR CB C N R 415 THR OG1 O N N 416 THR CG2 C N N 417 THR OXT O N N 418 THR H H N N 419 THR H2 H N N 420 THR HA H N N 421 THR HB H N N 422 THR HG1 H N N 423 THR HG21 H N N 424 THR HG22 H N N 425 THR HG23 H N N 426 THR HXT H N N 427 TRP N N N N 428 TRP CA C N S 429 TRP C C N N 430 TRP O O N N 431 TRP CB C N N 432 TRP CG C Y N 433 TRP CD1 C Y N 434 TRP CD2 C Y N 435 TRP NE1 N Y N 436 TRP CE2 C Y N 437 TRP CE3 C Y N 438 TRP CZ2 C Y N 439 TRP CZ3 C Y N 440 TRP CH2 C Y N 441 TRP OXT O N N 442 TRP H H N N 443 TRP H2 H N N 444 TRP HA H N N 445 TRP HB2 H N N 446 TRP HB3 H N N 447 TRP HD1 H N N 448 TRP HE1 H N N 449 TRP HE3 H N N 450 TRP HZ2 H N N 451 TRP HZ3 H N N 452 TRP HH2 H N N 453 TRP HXT H N N 454 TYR N N N N 455 TYR CA C N S 456 TYR C C N N 457 TYR O O N N 458 TYR CB C N N 459 TYR CG C Y N 460 TYR CD1 C Y N 461 TYR CD2 C Y N 462 TYR CE1 C Y N 463 TYR CE2 C Y N 464 TYR CZ C Y N 465 TYR OH O N N 466 TYR OXT O N N 467 TYR H H N N 468 TYR H2 H N N 469 TYR HA H N N 470 TYR HB2 H N N 471 TYR HB3 H N N 472 TYR HD1 H N N 473 TYR HD2 H N N 474 TYR HE1 H N N 475 TYR HE2 H N N 476 TYR HH H N N 477 TYR HXT H N N 478 VAL N N N N 479 VAL CA C N S 480 VAL C C N N 481 VAL O O N N 482 VAL CB C N N 483 VAL CG1 C N N 484 VAL CG2 C N N 485 VAL OXT O N N 486 VAL H H N N 487 VAL H2 H N N 488 VAL HA H N N 489 VAL HB H N N 490 VAL HG11 H N N 491 VAL HG12 H N N 492 VAL HG13 H N N 493 VAL HG21 H N N 494 VAL HG22 H N N 495 VAL HG23 H N N 496 VAL HXT H N N 497 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DC OP3 P sing N N 83 DC OP3 HOP3 sing N N 84 DC P OP1 doub N N 85 DC P OP2 sing N N 86 DC P "O5'" sing N N 87 DC OP2 HOP2 sing N N 88 DC "O5'" "C5'" sing N N 89 DC "C5'" "C4'" sing N N 90 DC "C5'" "H5'" sing N N 91 DC "C5'" "H5''" sing N N 92 DC "C4'" "O4'" sing N N 93 DC "C4'" "C3'" sing N N 94 DC "C4'" "H4'" sing N N 95 DC "O4'" "C1'" sing N N 96 DC "C3'" "O3'" sing N N 97 DC "C3'" "C2'" sing N N 98 DC "C3'" "H3'" sing N N 99 DC "O3'" "HO3'" sing N N 100 DC "C2'" "C1'" sing N N 101 DC "C2'" "H2'" sing N N 102 DC "C2'" "H2''" sing N N 103 DC "C1'" N1 sing N N 104 DC "C1'" "H1'" sing N N 105 DC N1 C2 sing N N 106 DC N1 C6 sing N N 107 DC C2 O2 doub N N 108 DC C2 N3 sing N N 109 DC N3 C4 doub N N 110 DC C4 N4 sing N N 111 DC C4 C5 sing N N 112 DC N4 H41 sing N N 113 DC N4 H42 sing N N 114 DC C5 C6 doub N N 115 DC C5 H5 sing N N 116 DC C6 H6 sing N N 117 DG OP3 P sing N N 118 DG OP3 HOP3 sing N N 119 DG P OP1 doub N N 120 DG P OP2 sing N N 121 DG P "O5'" sing N N 122 DG OP2 HOP2 sing N N 123 DG "O5'" "C5'" sing N N 124 DG "C5'" "C4'" sing N N 125 DG "C5'" "H5'" sing N N 126 DG "C5'" "H5''" sing N N 127 DG "C4'" "O4'" sing N N 128 DG "C4'" "C3'" sing N N 129 DG "C4'" "H4'" sing N N 130 DG "O4'" "C1'" sing N N 131 DG "C3'" "O3'" sing N N 132 DG "C3'" "C2'" sing N N 133 DG "C3'" "H3'" sing N N 134 DG "O3'" "HO3'" sing N N 135 DG "C2'" "C1'" sing N N 136 DG "C2'" "H2'" sing N N 137 DG "C2'" "H2''" sing N N 138 DG "C1'" N9 sing N N 139 DG "C1'" "H1'" sing N N 140 DG N9 C8 sing Y N 141 DG N9 C4 sing Y N 142 DG C8 N7 doub Y N 143 DG C8 H8 sing N N 144 DG N7 C5 sing Y N 145 DG C5 C6 sing N N 146 DG C5 C4 doub Y N 147 DG C6 O6 doub N N 148 DG C6 N1 sing N N 149 DG N1 C2 sing N N 150 DG N1 H1 sing N N 151 DG C2 N2 sing N N 152 DG C2 N3 doub N N 153 DG N2 H21 sing N N 154 DG N2 H22 sing N N 155 DG N3 C4 sing N N 156 DT OP3 P sing N N 157 DT OP3 HOP3 sing N N 158 DT P OP1 doub N N 159 DT P OP2 sing N N 160 DT P "O5'" sing N N 161 DT OP2 HOP2 sing N N 162 DT "O5'" "C5'" sing N N 163 DT "C5'" "C4'" sing N N 164 DT "C5'" "H5'" sing N N 165 DT "C5'" "H5''" sing N N 166 DT "C4'" "O4'" sing N N 167 DT "C4'" "C3'" sing N N 168 DT "C4'" "H4'" sing N N 169 DT "O4'" "C1'" sing N N 170 DT "C3'" "O3'" sing N N 171 DT "C3'" "C2'" sing N N 172 DT "C3'" "H3'" sing N N 173 DT "O3'" "HO3'" sing N N 174 DT "C2'" "C1'" sing N N 175 DT "C2'" "H2'" sing N N 176 DT "C2'" "H2''" sing N N 177 DT "C1'" N1 sing N N 178 DT "C1'" "H1'" sing N N 179 DT N1 C2 sing N N 180 DT N1 C6 sing N N 181 DT C2 O2 doub N N 182 DT C2 N3 sing N N 183 DT N3 C4 sing N N 184 DT N3 H3 sing N N 185 DT C4 O4 doub N N 186 DT C4 C5 sing N N 187 DT C5 C7 sing N N 188 DT C5 C6 doub N N 189 DT C7 H71 sing N N 190 DT C7 H72 sing N N 191 DT C7 H73 sing N N 192 DT C6 H6 sing N N 193 GLN N CA sing N N 194 GLN N H sing N N 195 GLN N H2 sing N N 196 GLN CA C sing N N 197 GLN CA CB sing N N 198 GLN CA HA sing N N 199 GLN C O doub N N 200 GLN C OXT sing N N 201 GLN CB CG sing N N 202 GLN CB HB2 sing N N 203 GLN CB HB3 sing N N 204 GLN CG CD sing N N 205 GLN CG HG2 sing N N 206 GLN CG HG3 sing N N 207 GLN CD OE1 doub N N 208 GLN CD NE2 sing N N 209 GLN NE2 HE21 sing N N 210 GLN NE2 HE22 sing N N 211 GLN OXT HXT sing N N 212 GLU N CA sing N N 213 GLU N H sing N N 214 GLU N H2 sing N N 215 GLU CA C sing N N 216 GLU CA CB sing N N 217 GLU CA HA sing N N 218 GLU C O doub N N 219 GLU C OXT sing N N 220 GLU CB CG sing N N 221 GLU CB HB2 sing N N 222 GLU CB HB3 sing N N 223 GLU CG CD sing N N 224 GLU CG HG2 sing N N 225 GLU CG HG3 sing N N 226 GLU CD OE1 doub N N 227 GLU CD OE2 sing N N 228 GLU OE2 HE2 sing N N 229 GLU OXT HXT sing N N 230 GLY N CA sing N N 231 GLY N H sing N N 232 GLY N H2 sing N N 233 GLY CA C sing N N 234 GLY CA HA2 sing N N 235 GLY CA HA3 sing N N 236 GLY C O doub N N 237 GLY C OXT sing N N 238 GLY OXT HXT sing N N 239 HIS N CA sing N N 240 HIS N H sing N N 241 HIS N H2 sing N N 242 HIS CA C sing N N 243 HIS CA CB sing N N 244 HIS CA HA sing N N 245 HIS C O doub N N 246 HIS C OXT sing N N 247 HIS CB CG sing N N 248 HIS CB HB2 sing N N 249 HIS CB HB3 sing N N 250 HIS CG ND1 sing Y N 251 HIS CG CD2 doub Y N 252 HIS ND1 CE1 doub Y N 253 HIS ND1 HD1 sing N N 254 HIS CD2 NE2 sing Y N 255 HIS CD2 HD2 sing N N 256 HIS CE1 NE2 sing Y N 257 HIS CE1 HE1 sing N N 258 HIS NE2 HE2 sing N N 259 HIS OXT HXT sing N N 260 HOH O H1 sing N N 261 HOH O H2 sing N N 262 ILE N CA sing N N 263 ILE N H sing N N 264 ILE N H2 sing N N 265 ILE CA C sing N N 266 ILE CA CB sing N N 267 ILE CA HA sing N N 268 ILE C O doub N N 269 ILE C OXT sing N N 270 ILE CB CG1 sing N N 271 ILE CB CG2 sing N N 272 ILE CB HB sing N N 273 ILE CG1 CD1 sing N N 274 ILE CG1 HG12 sing N N 275 ILE CG1 HG13 sing N N 276 ILE CG2 HG21 sing N N 277 ILE CG2 HG22 sing N N 278 ILE CG2 HG23 sing N N 279 ILE CD1 HD11 sing N N 280 ILE CD1 HD12 sing N N 281 ILE CD1 HD13 sing N N 282 ILE OXT HXT sing N N 283 LEU N CA sing N N 284 LEU N H sing N N 285 LEU N H2 sing N N 286 LEU CA C sing N N 287 LEU CA CB sing N N 288 LEU CA HA sing N N 289 LEU C O doub N N 290 LEU C OXT sing N N 291 LEU CB CG sing N N 292 LEU CB HB2 sing N N 293 LEU CB HB3 sing N N 294 LEU CG CD1 sing N N 295 LEU CG CD2 sing N N 296 LEU CG HG sing N N 297 LEU CD1 HD11 sing N N 298 LEU CD1 HD12 sing N N 299 LEU CD1 HD13 sing N N 300 LEU CD2 HD21 sing N N 301 LEU CD2 HD22 sing N N 302 LEU CD2 HD23 sing N N 303 LEU OXT HXT sing N N 304 LYS N CA sing N N 305 LYS N H sing N N 306 LYS N H2 sing N N 307 LYS CA C sing N N 308 LYS CA CB sing N N 309 LYS CA HA sing N N 310 LYS C O doub N N 311 LYS C OXT sing N N 312 LYS CB CG sing N N 313 LYS CB HB2 sing N N 314 LYS CB HB3 sing N N 315 LYS CG CD sing N N 316 LYS CG HG2 sing N N 317 LYS CG HG3 sing N N 318 LYS CD CE sing N N 319 LYS CD HD2 sing N N 320 LYS CD HD3 sing N N 321 LYS CE NZ sing N N 322 LYS CE HE2 sing N N 323 LYS CE HE3 sing N N 324 LYS NZ HZ1 sing N N 325 LYS NZ HZ2 sing N N 326 LYS NZ HZ3 sing N N 327 LYS OXT HXT sing N N 328 MET N CA sing N N 329 MET N H sing N N 330 MET N H2 sing N N 331 MET CA C sing N N 332 MET CA CB sing N N 333 MET CA HA sing N N 334 MET C O doub N N 335 MET C OXT sing N N 336 MET CB CG sing N N 337 MET CB HB2 sing N N 338 MET CB HB3 sing N N 339 MET CG SD sing N N 340 MET CG HG2 sing N N 341 MET CG HG3 sing N N 342 MET SD CE sing N N 343 MET CE HE1 sing N N 344 MET CE HE2 sing N N 345 MET CE HE3 sing N N 346 MET OXT HXT sing N N 347 PHE N CA sing N N 348 PHE N H sing N N 349 PHE N H2 sing N N 350 PHE CA C sing N N 351 PHE CA CB sing N N 352 PHE CA HA sing N N 353 PHE C O doub N N 354 PHE C OXT sing N N 355 PHE CB CG sing N N 356 PHE CB HB2 sing N N 357 PHE CB HB3 sing N N 358 PHE CG CD1 doub Y N 359 PHE CG CD2 sing Y N 360 PHE CD1 CE1 sing Y N 361 PHE CD1 HD1 sing N N 362 PHE CD2 CE2 doub Y N 363 PHE CD2 HD2 sing N N 364 PHE CE1 CZ doub Y N 365 PHE CE1 HE1 sing N N 366 PHE CE2 CZ sing Y N 367 PHE CE2 HE2 sing N N 368 PHE CZ HZ sing N N 369 PHE OXT HXT sing N N 370 PRO N CA sing N N 371 PRO N CD sing N N 372 PRO N H sing N N 373 PRO CA C sing N N 374 PRO CA CB sing N N 375 PRO CA HA sing N N 376 PRO C O doub N N 377 PRO C OXT sing N N 378 PRO CB CG sing N N 379 PRO CB HB2 sing N N 380 PRO CB HB3 sing N N 381 PRO CG CD sing N N 382 PRO CG HG2 sing N N 383 PRO CG HG3 sing N N 384 PRO CD HD2 sing N N 385 PRO CD HD3 sing N N 386 PRO OXT HXT sing N N 387 SER N CA sing N N 388 SER N H sing N N 389 SER N H2 sing N N 390 SER CA C sing N N 391 SER CA CB sing N N 392 SER CA HA sing N N 393 SER C O doub N N 394 SER C OXT sing N N 395 SER CB OG sing N N 396 SER CB HB2 sing N N 397 SER CB HB3 sing N N 398 SER OG HG sing N N 399 SER OXT HXT sing N N 400 THR N CA sing N N 401 THR N H sing N N 402 THR N H2 sing N N 403 THR CA C sing N N 404 THR CA CB sing N N 405 THR CA HA sing N N 406 THR C O doub N N 407 THR C OXT sing N N 408 THR CB OG1 sing N N 409 THR CB CG2 sing N N 410 THR CB HB sing N N 411 THR OG1 HG1 sing N N 412 THR CG2 HG21 sing N N 413 THR CG2 HG22 sing N N 414 THR CG2 HG23 sing N N 415 THR OXT HXT sing N N 416 TRP N CA sing N N 417 TRP N H sing N N 418 TRP N H2 sing N N 419 TRP CA C sing N N 420 TRP CA CB sing N N 421 TRP CA HA sing N N 422 TRP C O doub N N 423 TRP C OXT sing N N 424 TRP CB CG sing N N 425 TRP CB HB2 sing N N 426 TRP CB HB3 sing N N 427 TRP CG CD1 doub Y N 428 TRP CG CD2 sing Y N 429 TRP CD1 NE1 sing Y N 430 TRP CD1 HD1 sing N N 431 TRP CD2 CE2 doub Y N 432 TRP CD2 CE3 sing Y N 433 TRP NE1 CE2 sing Y N 434 TRP NE1 HE1 sing N N 435 TRP CE2 CZ2 sing Y N 436 TRP CE3 CZ3 doub Y N 437 TRP CE3 HE3 sing N N 438 TRP CZ2 CH2 doub Y N 439 TRP CZ2 HZ2 sing N N 440 TRP CZ3 CH2 sing Y N 441 TRP CZ3 HZ3 sing N N 442 TRP CH2 HH2 sing N N 443 TRP OXT HXT sing N N 444 TYR N CA sing N N 445 TYR N H sing N N 446 TYR N H2 sing N N 447 TYR CA C sing N N 448 TYR CA CB sing N N 449 TYR CA HA sing N N 450 TYR C O doub N N 451 TYR C OXT sing N N 452 TYR CB CG sing N N 453 TYR CB HB2 sing N N 454 TYR CB HB3 sing N N 455 TYR CG CD1 doub Y N 456 TYR CG CD2 sing Y N 457 TYR CD1 CE1 sing Y N 458 TYR CD1 HD1 sing N N 459 TYR CD2 CE2 doub Y N 460 TYR CD2 HD2 sing N N 461 TYR CE1 CZ doub Y N 462 TYR CE1 HE1 sing N N 463 TYR CE2 CZ sing Y N 464 TYR CE2 HE2 sing N N 465 TYR CZ OH sing N N 466 TYR OH HH sing N N 467 TYR OXT HXT sing N N 468 VAL N CA sing N N 469 VAL N H sing N N 470 VAL N H2 sing N N 471 VAL CA C sing N N 472 VAL CA CB sing N N 473 VAL CA HA sing N N 474 VAL C O doub N N 475 VAL C OXT sing N N 476 VAL CB CG1 sing N N 477 VAL CB CG2 sing N N 478 VAL CB HB sing N N 479 VAL CG1 HG11 sing N N 480 VAL CG1 HG12 sing N N 481 VAL CG1 HG13 sing N N 482 VAL CG2 HG21 sing N N 483 VAL CG2 HG22 sing N N 484 VAL CG2 HG23 sing N N 485 VAL OXT HXT sing N N 486 # _ndb_struct_conf_na.entry_id 2HEO _ndb_struct_conf_na.feature 'z-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 2 1_555 B DG 7 1_555 -0.526 -0.486 0.095 5.694 -6.942 2.816 1 B_DC201:DG206_E B 201 ? E 206 ? 19 1 1 A DG 3 1_555 B DC 6 1_555 0.171 -0.164 0.003 -8.842 -1.263 1.232 2 B_DG202:DC205_E B 202 ? E 205 ? 19 1 1 A DC 4 1_555 B DG 5 1_555 -0.466 -0.132 -0.186 0.505 -1.650 -2.422 3 B_DC203:DG204_E B 203 ? E 204 ? 19 1 1 A DG 5 1_555 B DC 4 1_555 0.242 -0.150 -0.080 -1.562 2.195 0.923 4 B_DG204:DC203_E B 204 ? E 203 ? 19 1 1 A DC 6 1_555 B DG 3 1_555 -0.252 -0.153 0.015 2.390 -2.558 0.817 5 B_DC205:DG202_E B 205 ? E 202 ? 19 1 1 A DG 7 1_555 B DC 2 1_555 0.107 -0.161 0.094 -0.718 -10.370 1.987 6 B_DG206:DC201_E B 206 ? E 201 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 2 1_555 B DG 7 1_555 A DG 3 1_555 B DC 6 1_555 0.206 5.300 3.850 0.323 -4.644 -5.682 -13.101 3.574 6.320 39.259 2.732 -7.344 1 BB_DC201DG202:DC205DG206_EE B 201 ? E 206 ? B 202 ? E 205 ? 1 A DG 3 1_555 B DC 6 1_555 A DC 4 1_555 B DG 5 1_555 0.120 -1.314 3.183 1.459 -8.881 -46.596 2.309 0.260 2.896 11.105 1.824 -47.410 2 BB_DG202DC203:DG204DC205_EE B 202 ? E 205 ? B 203 ? E 204 ? 1 A DC 4 1_555 B DG 5 1_555 A DG 5 1_555 B DC 4 1_555 0.123 5.395 3.401 -0.561 -2.758 -11.171 -22.057 -0.366 4.593 13.881 -2.823 -11.519 3 BB_DC203DG204:DC203DG204_EE B 203 ? E 204 ? B 204 ? E 203 ? 1 A DG 5 1_555 B DC 4 1_555 A DC 6 1_555 B DG 3 1_555 -0.146 -1.444 3.351 -0.743 -8.580 -46.164 2.513 -0.244 3.048 10.832 -0.938 -46.917 4 BB_DG204DC205:DG202DC203_EE B 204 ? E 203 ? B 205 ? E 202 ? 1 A DC 6 1_555 B DG 3 1_555 A DG 7 1_555 B DC 2 1_555 -0.136 5.445 3.542 -1.323 -4.827 -6.472 -16.179 -6.979 5.991 36.407 -9.978 -8.179 5 BB_DC205DG206:DC201DG202_EE B 205 ? E 202 ? B 206 ? E 201 ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1J75 _pdbx_initial_refinement_model.details 'PDB ENTRY 1J75' #