data_2HGV # _entry.id 2HGV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2HGV pdb_00002hgv 10.2210/pdb2hgv/pdb RCSB RCSB038332 ? ? WWPDB D_1000038332 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-08-15 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-30 5 'Structure model' 1 4 2023-11-15 6 'Structure model' 1 5 2024-11-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Data collection' 8 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_ref_seq_dif 7 4 'Structure model' struct_site 8 5 'Structure model' chem_comp_atom 9 5 'Structure model' chem_comp_bond 10 6 'Structure model' pdbx_entry_details 11 6 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_struct_ref_seq_dif.details' 5 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 4 'Structure model' '_struct_site.pdbx_auth_seq_id' 8 5 'Structure model' '_chem_comp_atom.atom_id' 9 5 'Structure model' '_chem_comp_bond.atom_id_2' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2HGV _pdbx_database_status.recvd_initial_deposition_date 2006-06-27 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2B18 'N-terminal GAF domain of transcriptional pleiotropic repressor CodY' unspecified PDB 2GX5 'N-terminal GAF domain of transcriptional pleiotropic repressor CodY' unspecified PDB 2B0L 'C-terminal DNA binding domain of transcriptional pleiotropic repressor CodY' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wilkinson, A.J.' 1 'Levdikov, V.M.' 2 'Blagova, E.V.' 3 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'The Structure of CodY, a GTP- and Isoleucine-responsive Regulator of Stationary Phase and Virulence in Gram-positive Bacteria' J.Biol.Chem. 281 11366 11373 2006 JBCHA3 US 0021-9258 0071 ? 16488888 10.1074/jbc.M513015200 1 'Crystallization of the GTP-dependent transcriptional regulator CodY from Bacillus subtilis' 'Acta Crystallogr.,Sect.D' 59 155 157 2003 ABCRE6 DK 0907-4449 0766 ? 12499555 10.1107/S0907444902018358 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Levdikov, V.M.' 1 ? primary 'Blagova, E.' 2 ? primary 'Joseph, P.' 3 ? primary 'Sonenshein, A.L.' 4 ? primary 'Wilkinson, A.J.' 5 ? 1 'Blagova, E.V.' 6 ? 1 'Levdikov, V.M.' 7 ? 1 'Tachikawa, K.' 8 ? 1 'Sonenshein, A.L.' 9 ? 1 'Wilkinson, A.J.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'GTP-sensing transcriptional pleiotropic repressor codY' 18831.396 1 ? ? 'N-terminal domain, residues 1-154' ? 2 non-polymer syn VALINE 117.146 1 ? ? ? ? 3 water nat water 18.015 131 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Vegetative protein 286B, VEG286B' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GSSHHHHHH(MSE)ALLQKTRIINS(MSE)LQAAAGKPVNFKE(MSE)AETLRDVIDSNIFVVSRRGKLLGYSINQQIEN DR(MSE)KK(MSE)LEDRQFPEEYTKNLFNVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGGERLGTLILSRL QDQFNDDDLILAEYGATVVG(MSE)EIL ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSHHHHHHMALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIENDRMKKMLEDRQF PEEYTKNLFNVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGGERLGTLILSRLQDQFNDDDLILAEYGATVVG MEIL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 VALINE VAL 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 MSE n 1 11 ALA n 1 12 LEU n 1 13 LEU n 1 14 GLN n 1 15 LYS n 1 16 THR n 1 17 ARG n 1 18 ILE n 1 19 ILE n 1 20 ASN n 1 21 SER n 1 22 MSE n 1 23 LEU n 1 24 GLN n 1 25 ALA n 1 26 ALA n 1 27 ALA n 1 28 GLY n 1 29 LYS n 1 30 PRO n 1 31 VAL n 1 32 ASN n 1 33 PHE n 1 34 LYS n 1 35 GLU n 1 36 MSE n 1 37 ALA n 1 38 GLU n 1 39 THR n 1 40 LEU n 1 41 ARG n 1 42 ASP n 1 43 VAL n 1 44 ILE n 1 45 ASP n 1 46 SER n 1 47 ASN n 1 48 ILE n 1 49 PHE n 1 50 VAL n 1 51 VAL n 1 52 SER n 1 53 ARG n 1 54 ARG n 1 55 GLY n 1 56 LYS n 1 57 LEU n 1 58 LEU n 1 59 GLY n 1 60 TYR n 1 61 SER n 1 62 ILE n 1 63 ASN n 1 64 GLN n 1 65 GLN n 1 66 ILE n 1 67 GLU n 1 68 ASN n 1 69 ASP n 1 70 ARG n 1 71 MSE n 1 72 LYS n 1 73 LYS n 1 74 MSE n 1 75 LEU n 1 76 GLU n 1 77 ASP n 1 78 ARG n 1 79 GLN n 1 80 PHE n 1 81 PRO n 1 82 GLU n 1 83 GLU n 1 84 TYR n 1 85 THR n 1 86 LYS n 1 87 ASN n 1 88 LEU n 1 89 PHE n 1 90 ASN n 1 91 VAL n 1 92 PRO n 1 93 GLU n 1 94 THR n 1 95 SER n 1 96 SER n 1 97 ASN n 1 98 LEU n 1 99 ASP n 1 100 ILE n 1 101 ASN n 1 102 SER n 1 103 GLU n 1 104 TYR n 1 105 THR n 1 106 ALA n 1 107 PHE n 1 108 PRO n 1 109 VAL n 1 110 GLU n 1 111 ASN n 1 112 ARG n 1 113 ASP n 1 114 LEU n 1 115 PHE n 1 116 GLN n 1 117 ALA n 1 118 GLY n 1 119 LEU n 1 120 THR n 1 121 THR n 1 122 ILE n 1 123 VAL n 1 124 PRO n 1 125 ILE n 1 126 ILE n 1 127 GLY n 1 128 GLY n 1 129 GLY n 1 130 GLU n 1 131 ARG n 1 132 LEU n 1 133 GLY n 1 134 THR n 1 135 LEU n 1 136 ILE n 1 137 LEU n 1 138 SER n 1 139 ARG n 1 140 LEU n 1 141 GLN n 1 142 ASP n 1 143 GLN n 1 144 PHE n 1 145 ASN n 1 146 ASP n 1 147 ASP n 1 148 ASP n 1 149 LEU n 1 150 ILE n 1 151 LEU n 1 152 ALA n 1 153 GLU n 1 154 TYR n 1 155 GLY n 1 156 ALA n 1 157 THR n 1 158 VAL n 1 159 VAL n 1 160 GLY n 1 161 MSE n 1 162 GLU n 1 163 ILE n 1 164 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Bacillus _entity_src_gen.pdbx_gene_src_gene codY _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus subtilis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1423 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-YSBLIC _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -8 ? ? ? A . n A 1 2 SER 2 -7 ? ? ? A . n A 1 3 SER 3 -6 ? ? ? A . n A 1 4 HIS 4 -5 ? ? ? A . n A 1 5 HIS 5 -4 ? ? ? A . n A 1 6 HIS 6 -3 ? ? ? A . n A 1 7 HIS 7 -2 ? ? ? A . n A 1 8 HIS 8 -1 ? ? ? A . n A 1 9 HIS 9 0 ? ? ? A . n A 1 10 MSE 10 1 1 MSE MSE A . n A 1 11 ALA 11 2 2 ALA ALA A . n A 1 12 LEU 12 3 3 LEU LEU A . n A 1 13 LEU 13 4 4 LEU LEU A . n A 1 14 GLN 14 5 5 GLN GLN A . n A 1 15 LYS 15 6 6 LYS LYS A . n A 1 16 THR 16 7 7 THR THR A . n A 1 17 ARG 17 8 8 ARG ARG A . n A 1 18 ILE 18 9 9 ILE ILE A . n A 1 19 ILE 19 10 10 ILE ILE A . n A 1 20 ASN 20 11 11 ASN ASN A . n A 1 21 SER 21 12 12 SER SER A . n A 1 22 MSE 22 13 13 MSE MSE A . n A 1 23 LEU 23 14 14 LEU LEU A . n A 1 24 GLN 24 15 15 GLN GLN A . n A 1 25 ALA 25 16 16 ALA ALA A . n A 1 26 ALA 26 17 17 ALA ALA A . n A 1 27 ALA 27 18 18 ALA ALA A . n A 1 28 GLY 28 19 19 GLY GLY A . n A 1 29 LYS 29 20 20 LYS LYS A . n A 1 30 PRO 30 21 21 PRO PRO A . n A 1 31 VAL 31 22 22 VAL VAL A . n A 1 32 ASN 32 23 23 ASN ASN A . n A 1 33 PHE 33 24 24 PHE PHE A . n A 1 34 LYS 34 25 25 LYS LYS A . n A 1 35 GLU 35 26 26 GLU GLU A . n A 1 36 MSE 36 27 27 MSE MSE A . n A 1 37 ALA 37 28 28 ALA ALA A . n A 1 38 GLU 38 29 29 GLU GLU A . n A 1 39 THR 39 30 30 THR THR A . n A 1 40 LEU 40 31 31 LEU LEU A . n A 1 41 ARG 41 32 32 ARG ARG A . n A 1 42 ASP 42 33 33 ASP ASP A . n A 1 43 VAL 43 34 34 VAL VAL A . n A 1 44 ILE 44 35 35 ILE ILE A . n A 1 45 ASP 45 36 36 ASP ASP A . n A 1 46 SER 46 37 37 SER SER A . n A 1 47 ASN 47 38 38 ASN ASN A . n A 1 48 ILE 48 39 39 ILE ILE A . n A 1 49 PHE 49 40 40 PHE PHE A . n A 1 50 VAL 50 41 41 VAL VAL A . n A 1 51 VAL 51 42 42 VAL VAL A . n A 1 52 SER 52 43 43 SER SER A . n A 1 53 ARG 53 44 44 ARG ARG A . n A 1 54 ARG 54 45 45 ARG ARG A . n A 1 55 GLY 55 46 46 GLY GLY A . n A 1 56 LYS 56 47 47 LYS LYS A . n A 1 57 LEU 57 48 48 LEU LEU A . n A 1 58 LEU 58 49 49 LEU LEU A . n A 1 59 GLY 59 50 50 GLY GLY A . n A 1 60 TYR 60 51 51 TYR TYR A . n A 1 61 SER 61 52 52 SER SER A . n A 1 62 ILE 62 53 53 ILE ILE A . n A 1 63 ASN 63 54 54 ASN ASN A . n A 1 64 GLN 64 55 55 GLN GLN A . n A 1 65 GLN 65 56 56 GLN GLN A . n A 1 66 ILE 66 57 57 ILE ILE A . n A 1 67 GLU 67 58 58 GLU GLU A . n A 1 68 ASN 68 59 59 ASN ASN A . n A 1 69 ASP 69 60 60 ASP ASP A . n A 1 70 ARG 70 61 61 ARG ARG A . n A 1 71 MSE 71 62 62 MSE MSE A . n A 1 72 LYS 72 63 63 LYS LYS A . n A 1 73 LYS 73 64 64 LYS LYS A . n A 1 74 MSE 74 65 65 MSE MSE A . n A 1 75 LEU 75 66 66 LEU LEU A . n A 1 76 GLU 76 67 67 GLU GLU A . n A 1 77 ASP 77 68 68 ASP ASP A . n A 1 78 ARG 78 69 69 ARG ARG A . n A 1 79 GLN 79 70 70 GLN GLN A . n A 1 80 PHE 80 71 71 PHE PHE A . n A 1 81 PRO 81 72 72 PRO PRO A . n A 1 82 GLU 82 73 73 GLU GLU A . n A 1 83 GLU 83 74 74 GLU GLU A . n A 1 84 TYR 84 75 75 TYR TYR A . n A 1 85 THR 85 76 76 THR THR A . n A 1 86 LYS 86 77 77 LYS LYS A . n A 1 87 ASN 87 78 78 ASN ASN A . n A 1 88 LEU 88 79 79 LEU LEU A . n A 1 89 PHE 89 80 80 PHE PHE A . n A 1 90 ASN 90 81 81 ASN ASN A . n A 1 91 VAL 91 82 82 VAL VAL A . n A 1 92 PRO 92 83 83 PRO PRO A . n A 1 93 GLU 93 84 84 GLU GLU A . n A 1 94 THR 94 85 85 THR THR A . n A 1 95 SER 95 86 86 SER SER A . n A 1 96 SER 96 87 87 SER SER A . n A 1 97 ASN 97 88 88 ASN ASN A . n A 1 98 LEU 98 89 89 LEU LEU A . n A 1 99 ASP 99 90 90 ASP ASP A . n A 1 100 ILE 100 91 91 ILE ILE A . n A 1 101 ASN 101 92 92 ASN ASN A . n A 1 102 SER 102 93 93 SER SER A . n A 1 103 GLU 103 94 94 GLU GLU A . n A 1 104 TYR 104 95 95 TYR TYR A . n A 1 105 THR 105 96 96 THR THR A . n A 1 106 ALA 106 97 97 ALA ALA A . n A 1 107 PHE 107 98 98 PHE PHE A . n A 1 108 PRO 108 99 99 PRO PRO A . n A 1 109 VAL 109 100 100 VAL VAL A . n A 1 110 GLU 110 101 101 GLU GLU A . n A 1 111 ASN 111 102 102 ASN ASN A . n A 1 112 ARG 112 103 103 ARG ARG A . n A 1 113 ASP 113 104 104 ASP ASP A . n A 1 114 LEU 114 105 105 LEU LEU A . n A 1 115 PHE 115 106 106 PHE PHE A . n A 1 116 GLN 116 107 107 GLN GLN A . n A 1 117 ALA 117 108 108 ALA ALA A . n A 1 118 GLY 118 109 109 GLY GLY A . n A 1 119 LEU 119 110 110 LEU LEU A . n A 1 120 THR 120 111 111 THR THR A . n A 1 121 THR 121 112 112 THR THR A . n A 1 122 ILE 122 113 113 ILE ILE A . n A 1 123 VAL 123 114 114 VAL VAL A . n A 1 124 PRO 124 115 115 PRO PRO A . n A 1 125 ILE 125 116 116 ILE ILE A . n A 1 126 ILE 126 117 117 ILE ILE A . n A 1 127 GLY 127 118 118 GLY GLY A . n A 1 128 GLY 128 119 119 GLY GLY A . n A 1 129 GLY 129 120 120 GLY GLY A . n A 1 130 GLU 130 121 121 GLU GLU A . n A 1 131 ARG 131 122 122 ARG ARG A . n A 1 132 LEU 132 123 123 LEU LEU A . n A 1 133 GLY 133 124 124 GLY GLY A . n A 1 134 THR 134 125 125 THR THR A . n A 1 135 LEU 135 126 126 LEU LEU A . n A 1 136 ILE 136 127 127 ILE ILE A . n A 1 137 LEU 137 128 128 LEU LEU A . n A 1 138 SER 138 129 129 SER SER A . n A 1 139 ARG 139 130 130 ARG ARG A . n A 1 140 LEU 140 131 131 LEU LEU A . n A 1 141 GLN 141 132 132 GLN GLN A . n A 1 142 ASP 142 133 133 ASP ASP A . n A 1 143 GLN 143 134 134 GLN GLN A . n A 1 144 PHE 144 135 135 PHE PHE A . n A 1 145 ASN 145 136 136 ASN ASN A . n A 1 146 ASP 146 137 137 ASP ASP A . n A 1 147 ASP 147 138 138 ASP ASP A . n A 1 148 ASP 148 139 139 ASP ASP A . n A 1 149 LEU 149 140 140 LEU LEU A . n A 1 150 ILE 150 141 141 ILE ILE A . n A 1 151 LEU 151 142 142 LEU LEU A . n A 1 152 ALA 152 143 143 ALA ALA A . n A 1 153 GLU 153 144 144 GLU GLU A . n A 1 154 TYR 154 145 145 TYR TYR A . n A 1 155 GLY 155 146 146 GLY GLY A . n A 1 156 ALA 156 147 147 ALA ALA A . n A 1 157 THR 157 148 148 THR THR A . n A 1 158 VAL 158 149 149 VAL VAL A . n A 1 159 VAL 159 150 150 VAL VAL A . n A 1 160 GLY 160 151 151 GLY GLY A . n A 1 161 MSE 161 152 152 MSE MSE A . n A 1 162 GLU 162 153 153 GLU GLU A . n A 1 163 ILE 163 154 154 ILE ILE A . n A 1 164 LEU 164 155 155 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 VAL 1 200 1 VAL VAL A . C 3 HOH 1 201 1 HOH HOH A . C 3 HOH 2 202 2 HOH HOH A . C 3 HOH 3 203 3 HOH HOH A . C 3 HOH 4 204 4 HOH HOH A . C 3 HOH 5 205 5 HOH HOH A . C 3 HOH 6 206 6 HOH HOH A . C 3 HOH 7 207 7 HOH HOH A . C 3 HOH 8 208 8 HOH HOH A . C 3 HOH 9 209 9 HOH HOH A . C 3 HOH 10 210 10 HOH HOH A . C 3 HOH 11 211 11 HOH HOH A . C 3 HOH 12 212 12 HOH HOH A . C 3 HOH 13 213 13 HOH HOH A . C 3 HOH 14 214 14 HOH HOH A . C 3 HOH 15 215 15 HOH HOH A . C 3 HOH 16 216 16 HOH HOH A . C 3 HOH 17 217 17 HOH HOH A . C 3 HOH 18 218 18 HOH HOH A . C 3 HOH 19 219 19 HOH HOH A . C 3 HOH 20 220 20 HOH HOH A . C 3 HOH 21 221 21 HOH HOH A . C 3 HOH 22 222 22 HOH HOH A . C 3 HOH 23 223 23 HOH HOH A . C 3 HOH 24 224 24 HOH HOH A . C 3 HOH 25 225 25 HOH HOH A . C 3 HOH 26 226 26 HOH HOH A . C 3 HOH 27 227 27 HOH HOH A . C 3 HOH 28 228 28 HOH HOH A . C 3 HOH 29 229 29 HOH HOH A . C 3 HOH 30 230 30 HOH HOH A . C 3 HOH 31 231 31 HOH HOH A . C 3 HOH 32 232 32 HOH HOH A . C 3 HOH 33 233 33 HOH HOH A . C 3 HOH 34 234 34 HOH HOH A . C 3 HOH 35 235 35 HOH HOH A . C 3 HOH 36 236 36 HOH HOH A . C 3 HOH 37 237 37 HOH HOH A . C 3 HOH 38 238 38 HOH HOH A . C 3 HOH 39 239 39 HOH HOH A . C 3 HOH 40 240 40 HOH HOH A . C 3 HOH 41 241 41 HOH HOH A . C 3 HOH 42 242 42 HOH HOH A . C 3 HOH 43 243 43 HOH HOH A . C 3 HOH 44 244 44 HOH HOH A . C 3 HOH 45 245 45 HOH HOH A . C 3 HOH 46 246 46 HOH HOH A . C 3 HOH 47 247 47 HOH HOH A . C 3 HOH 48 248 48 HOH HOH A . C 3 HOH 49 249 49 HOH HOH A . C 3 HOH 50 250 50 HOH HOH A . C 3 HOH 51 251 51 HOH HOH A . C 3 HOH 52 252 52 HOH HOH A . C 3 HOH 53 253 53 HOH HOH A . C 3 HOH 54 254 54 HOH HOH A . C 3 HOH 55 255 55 HOH HOH A . C 3 HOH 56 256 56 HOH HOH A . C 3 HOH 57 257 57 HOH HOH A . C 3 HOH 58 258 58 HOH HOH A . C 3 HOH 59 259 59 HOH HOH A . C 3 HOH 60 260 60 HOH HOH A . C 3 HOH 61 261 61 HOH HOH A . C 3 HOH 62 262 62 HOH HOH A . C 3 HOH 63 263 63 HOH HOH A . C 3 HOH 64 264 64 HOH HOH A . C 3 HOH 65 265 65 HOH HOH A . C 3 HOH 66 266 66 HOH HOH A . C 3 HOH 67 267 67 HOH HOH A . C 3 HOH 68 268 68 HOH HOH A . C 3 HOH 69 269 69 HOH HOH A . C 3 HOH 70 270 70 HOH HOH A . C 3 HOH 71 271 71 HOH HOH A . C 3 HOH 72 272 72 HOH HOH A . C 3 HOH 73 273 73 HOH HOH A . C 3 HOH 74 274 74 HOH HOH A . C 3 HOH 75 275 75 HOH HOH A . C 3 HOH 76 276 76 HOH HOH A . C 3 HOH 77 277 77 HOH HOH A . C 3 HOH 78 278 78 HOH HOH A . C 3 HOH 79 279 79 HOH HOH A . C 3 HOH 80 280 80 HOH HOH A . C 3 HOH 81 281 81 HOH HOH A . C 3 HOH 82 282 82 HOH HOH A . C 3 HOH 83 283 83 HOH HOH A . C 3 HOH 84 284 84 HOH HOH A . C 3 HOH 85 285 85 HOH HOH A . C 3 HOH 86 286 86 HOH HOH A . C 3 HOH 87 287 87 HOH HOH A . C 3 HOH 88 288 88 HOH HOH A . C 3 HOH 89 289 89 HOH HOH A . C 3 HOH 90 290 90 HOH HOH A . C 3 HOH 91 291 91 HOH HOH A . C 3 HOH 92 292 92 HOH HOH A . C 3 HOH 93 293 93 HOH HOH A . C 3 HOH 94 294 94 HOH HOH A . C 3 HOH 95 295 95 HOH HOH A . C 3 HOH 96 296 96 HOH HOH A . C 3 HOH 97 297 97 HOH HOH A . C 3 HOH 98 298 98 HOH HOH A . C 3 HOH 99 299 99 HOH HOH A . C 3 HOH 100 300 100 HOH HOH A . C 3 HOH 101 301 101 HOH HOH A . C 3 HOH 102 302 102 HOH HOH A . C 3 HOH 103 303 103 HOH HOH A . C 3 HOH 104 304 104 HOH HOH A . C 3 HOH 105 305 105 HOH HOH A . C 3 HOH 106 306 106 HOH HOH A . C 3 HOH 107 307 107 HOH HOH A . C 3 HOH 108 308 108 HOH HOH A . C 3 HOH 109 309 109 HOH HOH A . C 3 HOH 110 310 110 HOH HOH A . C 3 HOH 111 311 111 HOH HOH A . C 3 HOH 112 312 112 HOH HOH A . C 3 HOH 113 313 113 HOH HOH A . C 3 HOH 114 314 114 HOH HOH A . C 3 HOH 115 315 115 HOH HOH A . C 3 HOH 116 316 116 HOH HOH A . C 3 HOH 117 317 117 HOH HOH A . C 3 HOH 118 318 118 HOH HOH A . C 3 HOH 119 319 119 HOH HOH A . C 3 HOH 120 320 120 HOH HOH A . C 3 HOH 121 321 121 HOH HOH A . C 3 HOH 122 322 122 HOH HOH A . C 3 HOH 123 323 123 HOH HOH A . C 3 HOH 124 324 124 HOH HOH A . C 3 HOH 125 325 125 HOH HOH A . C 3 HOH 126 326 126 HOH HOH A . C 3 HOH 127 327 127 HOH HOH A . C 3 HOH 128 328 128 HOH HOH A . C 3 HOH 129 329 129 HOH HOH A . C 3 HOH 130 330 130 HOH HOH A . C 3 HOH 131 331 131 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0005 ? 1 HKL-2000 'data reduction' . ? 2 HKL-2000 'data scaling' . ? 3 MOLREP phasing . ? 4 # _cell.entry_id 2HGV _cell.length_a 34.690 _cell.length_b 84.846 _cell.length_c 54.929 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2HGV _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # _exptl.entry_id 2HGV _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.15 _exptl_crystal.density_percent_sol 42.68 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details 'PEG 5000, calcium acetate, valine, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2005-04-25 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Silicon (1 1 1) channel-cut' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9800 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE BM14' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline BM14 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9800 # _reflns.entry_id 2HGV _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 2.3 _reflns.d_resolution_low 30 _reflns.number_all 7646 _reflns.number_obs 7646 _reflns.percent_possible_obs 99.0 _reflns.pdbx_Rmerge_I_obs 0.104 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.7 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.38 _reflns_shell.percent_possible_all 92.2 _reflns_shell.Rmerge_I_obs 0.361 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 4.2 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 672 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2HGV _refine.ls_number_reflns_obs 7231 _refine.ls_number_reflns_all 7231 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 27.72 _refine.ls_d_res_high 2.30 _refine.ls_percent_reflns_obs 100.00 _refine.ls_R_factor_obs 0.16804 _refine.ls_R_factor_all 0.16804 _refine.ls_R_factor_R_work 0.16427 _refine.ls_R_factor_R_free 0.24418 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.6 _refine.ls_number_reflns_R_free 350 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.962 _refine.correlation_coeff_Fo_to_Fc_free 0.931 _refine.B_iso_mean 39.090 _refine.aniso_B[1][1] -0.01 _refine.aniso_B[2][2] 0.18 _refine.aniso_B[3][3] -0.16 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 2B18' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model anisotropic _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.249 _refine.overall_SU_ML 0.158 _refine.overall_SU_B 14.285 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1236 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 8 _refine_hist.number_atoms_solvent 131 _refine_hist.number_atoms_total 1375 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 27.72 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.013 0.022 ? 1260 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 1182 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.408 1.985 ? 1703 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.819 3.000 ? 2752 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.821 5.000 ? 158 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 38.500 25.323 ? 62 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.735 15.000 ? 238 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 16.204 15.000 ? 9 'X-RAY DIFFRACTION' ? r_chiral_restr 0.077 0.200 ? 198 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 1399 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 238 'X-RAY DIFFRACTION' ? r_nbd_refined 0.209 0.200 ? 265 'X-RAY DIFFRACTION' ? r_nbd_other 0.196 0.200 ? 1209 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.170 0.200 ? 623 'X-RAY DIFFRACTION' ? r_nbtor_other 0.087 0.200 ? 706 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.193 0.200 ? 99 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.221 0.200 ? 16 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.249 0.200 ? 52 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.251 0.200 ? 20 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2.830 4.000 ? 965 'X-RAY DIFFRACTION' ? r_mcbond_other 0.858 4.000 ? 323 'X-RAY DIFFRACTION' ? r_mcangle_it 3.701 6.000 ? 1266 'X-RAY DIFFRACTION' ? r_scbond_it 3.738 8.000 ? 524 'X-RAY DIFFRACTION' ? r_scangle_it 5.367 10.000 ? 435 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 1.677 3.000 ? 2786 'X-RAY DIFFRACTION' ? r_sphericity_free 4.256 3.000 ? 131 'X-RAY DIFFRACTION' ? r_sphericity_bonded 1.901 3.000 ? 2426 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.300 _refine_ls_shell.d_res_low 2.360 _refine_ls_shell.number_reflns_R_work 479 _refine_ls_shell.R_factor_R_work 0.168 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.227 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 14 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 479 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 2HGV _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2HGV _struct.title 'N-terminal GAF domain of transcriptional pleiotropic repressor CodY' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2HGV _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' _struct_keywords.text ;CodY, DNA-binding, Nucleotide-binding, Repressor, Transcription regulation, GAF domain, Branched chain amino acid binding, DNA BINDING PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CODY_BACSU _struct_ref.pdbx_db_accession P39779 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2HGV _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 10 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 164 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P39779 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 154 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 155 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2HGV GLY A 1 ? UNP P39779 ? ? 'cloning artifact' -8 1 1 2HGV SER A 2 ? UNP P39779 ? ? 'cloning artifact' -7 2 1 2HGV SER A 3 ? UNP P39779 ? ? 'cloning artifact' -6 3 1 2HGV HIS A 4 ? UNP P39779 ? ? 'expression tag' -5 4 1 2HGV HIS A 5 ? UNP P39779 ? ? 'expression tag' -4 5 1 2HGV HIS A 6 ? UNP P39779 ? ? 'expression tag' -3 6 1 2HGV HIS A 7 ? UNP P39779 ? ? 'expression tag' -2 7 1 2HGV HIS A 8 ? UNP P39779 ? ? 'expression tag' -1 8 1 2HGV HIS A 9 ? UNP P39779 ? ? 'expression tag' 0 9 1 2HGV MSE A 10 ? UNP P39779 MET 0 'modified residue' 1 10 1 2HGV MSE A 22 ? UNP P39779 MET 12 'modified residue' 13 11 1 2HGV MSE A 36 ? UNP P39779 MET 26 'modified residue' 27 12 1 2HGV MSE A 71 ? UNP P39779 MET 61 'modified residue' 62 13 1 2HGV MSE A 74 ? UNP P39779 MET 64 'modified residue' 65 14 1 2HGV MSE A 161 ? UNP P39779 MET 151 'modified residue' 152 15 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_755 -x+2,-y,z -1.0000000000 0.0000000000 0.0000000000 69.3800000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 11 ? ALA A 27 ? ALA A 2 ALA A 18 1 ? 17 HELX_P HELX_P2 2 ASN A 32 ? ASP A 45 ? ASN A 23 ASP A 36 1 ? 14 HELX_P HELX_P3 3 ASN A 68 ? ARG A 78 ? ASN A 59 ARG A 69 1 ? 11 HELX_P HELX_P4 4 PRO A 81 ? LEU A 88 ? PRO A 72 LEU A 79 1 ? 8 HELX_P HELX_P5 5 PHE A 89 ? VAL A 91 ? PHE A 80 VAL A 82 5 ? 3 HELX_P HELX_P6 6 PRO A 108 ? ARG A 112 ? PRO A 99 ARG A 103 5 ? 5 HELX_P HELX_P7 7 ASN A 145 ? ILE A 163 ? ASN A 136 ILE A 154 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 10 C ? ? ? 1_555 A ALA 11 N ? ? A MSE 1 A ALA 2 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale2 covale both ? A SER 21 C ? ? ? 1_555 A MSE 22 N ? ? A SER 12 A MSE 13 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale3 covale both ? A MSE 22 C ? ? ? 1_555 A LEU 23 N ? ? A MSE 13 A LEU 14 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale4 covale both ? A GLU 35 C ? ? ? 1_555 A MSE 36 N ? ? A GLU 26 A MSE 27 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale5 covale both ? A MSE 36 C ? ? ? 1_555 A ALA 37 N ? ? A MSE 27 A ALA 28 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale6 covale both ? A ARG 70 C ? ? ? 1_555 A MSE 71 N ? ? A ARG 61 A MSE 62 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale7 covale both ? A MSE 71 C ? ? ? 1_555 A LYS 72 N ? ? A MSE 62 A LYS 63 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale8 covale both ? A LYS 73 C ? ? ? 1_555 A MSE 74 N ? ? A LYS 64 A MSE 65 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale9 covale both ? A MSE 74 C ? ? ? 1_555 A LEU 75 N ? ? A MSE 65 A LEU 66 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale10 covale both ? A GLY 160 C ? ? ? 1_555 A MSE 161 N ? ? A GLY 151 A MSE 152 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale11 covale both ? A MSE 161 C ? ? ? 1_555 A GLU 162 N ? ? A MSE 152 A GLU 153 1_555 ? ? ? ? ? ? ? 1.336 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 MSE A 10 ? . . . . MSE A 1 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 2 MSE A 22 ? . . . . MSE A 13 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 3 MSE A 36 ? . . . . MSE A 27 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 4 MSE A 71 ? . . . . MSE A 62 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 5 MSE A 74 ? . . . . MSE A 65 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 6 MSE A 161 ? . . . . MSE A 152 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ALA _struct_mon_prot_cis.label_seq_id 27 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ALA _struct_mon_prot_cis.auth_seq_id 18 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 GLY _struct_mon_prot_cis.pdbx_label_seq_id_2 28 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 GLY _struct_mon_prot_cis.pdbx_auth_seq_id_2 19 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 1.72 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 57 ? SER A 61 ? LEU A 48 SER A 52 A 2 ASN A 47 ? SER A 52 ? ASN A 38 SER A 43 A 3 ARG A 131 ? LEU A 140 ? ARG A 122 LEU A 131 A 4 GLY A 118 ? ILE A 126 ? GLY A 109 ILE A 117 A 5 SER A 95 ? LEU A 98 ? SER A 86 LEU A 89 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLY A 59 ? O GLY A 50 N VAL A 50 ? N VAL A 41 A 2 3 N ASN A 47 ? N ASN A 38 O SER A 138 ? O SER A 129 A 3 4 O LEU A 135 ? O LEU A 126 N VAL A 123 ? N VAL A 114 A 4 5 O THR A 120 ? O THR A 111 N LEU A 98 ? N LEU A 89 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id VAL _struct_site.pdbx_auth_seq_id 200 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 8 _struct_site.details 'BINDING SITE FOR RESIDUE VAL A 200' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 ARG A 70 ? ARG A 61 . ? 1_555 ? 2 AC1 8 PRO A 81 ? PRO A 72 . ? 1_555 ? 3 AC1 8 THR A 105 ? THR A 96 . ? 1_555 ? 4 AC1 8 ALA A 106 ? ALA A 97 . ? 1_555 ? 5 AC1 8 PHE A 107 ? PHE A 98 . ? 1_555 ? 6 AC1 8 PRO A 108 ? PRO A 99 . ? 1_555 ? 7 AC1 8 VAL A 109 ? VAL A 100 . ? 1_555 ? 8 AC1 8 HOH C . ? HOH A 229 . ? 1_555 ? # _pdbx_entry_details.entry_id 2HGV _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 21 ? ? -42.23 109.14 2 1 VAL A 22 ? ? -26.45 138.03 3 1 PHE A 106 ? ? -105.96 45.24 4 1 GLN A 132 ? ? 74.71 -48.31 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 10 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 22 A MSE 13 ? MET SELENOMETHIONINE 3 A MSE 36 A MSE 27 ? MET SELENOMETHIONINE 4 A MSE 71 A MSE 62 ? MET SELENOMETHIONINE 5 A MSE 74 A MSE 65 ? MET SELENOMETHIONINE 6 A MSE 161 A MSE 152 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 327 ? C HOH . 2 1 A HOH 328 ? C HOH . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -8 ? A GLY 1 2 1 Y 1 A SER -7 ? A SER 2 3 1 Y 1 A SER -6 ? A SER 3 4 1 Y 1 A HIS -5 ? A HIS 4 5 1 Y 1 A HIS -4 ? A HIS 5 6 1 Y 1 A HIS -3 ? A HIS 6 7 1 Y 1 A HIS -2 ? A HIS 7 8 1 Y 1 A HIS -1 ? A HIS 8 9 1 Y 1 A HIS 0 ? A HIS 9 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 MSE N N N N 236 MSE CA C N S 237 MSE C C N N 238 MSE O O N N 239 MSE OXT O N N 240 MSE CB C N N 241 MSE CG C N N 242 MSE SE SE N N 243 MSE CE C N N 244 MSE H H N N 245 MSE H2 H N N 246 MSE HA H N N 247 MSE HXT H N N 248 MSE HB2 H N N 249 MSE HB3 H N N 250 MSE HG2 H N N 251 MSE HG3 H N N 252 MSE HE1 H N N 253 MSE HE2 H N N 254 MSE HE3 H N N 255 PHE N N N N 256 PHE CA C N S 257 PHE C C N N 258 PHE O O N N 259 PHE CB C N N 260 PHE CG C Y N 261 PHE CD1 C Y N 262 PHE CD2 C Y N 263 PHE CE1 C Y N 264 PHE CE2 C Y N 265 PHE CZ C Y N 266 PHE OXT O N N 267 PHE H H N N 268 PHE H2 H N N 269 PHE HA H N N 270 PHE HB2 H N N 271 PHE HB3 H N N 272 PHE HD1 H N N 273 PHE HD2 H N N 274 PHE HE1 H N N 275 PHE HE2 H N N 276 PHE HZ H N N 277 PHE HXT H N N 278 PRO N N N N 279 PRO CA C N S 280 PRO C C N N 281 PRO O O N N 282 PRO CB C N N 283 PRO CG C N N 284 PRO CD C N N 285 PRO OXT O N N 286 PRO H H N N 287 PRO HA H N N 288 PRO HB2 H N N 289 PRO HB3 H N N 290 PRO HG2 H N N 291 PRO HG3 H N N 292 PRO HD2 H N N 293 PRO HD3 H N N 294 PRO HXT H N N 295 SER N N N N 296 SER CA C N S 297 SER C C N N 298 SER O O N N 299 SER CB C N N 300 SER OG O N N 301 SER OXT O N N 302 SER H H N N 303 SER H2 H N N 304 SER HA H N N 305 SER HB2 H N N 306 SER HB3 H N N 307 SER HG H N N 308 SER HXT H N N 309 THR N N N N 310 THR CA C N S 311 THR C C N N 312 THR O O N N 313 THR CB C N R 314 THR OG1 O N N 315 THR CG2 C N N 316 THR OXT O N N 317 THR H H N N 318 THR H2 H N N 319 THR HA H N N 320 THR HB H N N 321 THR HG1 H N N 322 THR HG21 H N N 323 THR HG22 H N N 324 THR HG23 H N N 325 THR HXT H N N 326 TYR N N N N 327 TYR CA C N S 328 TYR C C N N 329 TYR O O N N 330 TYR CB C N N 331 TYR CG C Y N 332 TYR CD1 C Y N 333 TYR CD2 C Y N 334 TYR CE1 C Y N 335 TYR CE2 C Y N 336 TYR CZ C Y N 337 TYR OH O N N 338 TYR OXT O N N 339 TYR H H N N 340 TYR H2 H N N 341 TYR HA H N N 342 TYR HB2 H N N 343 TYR HB3 H N N 344 TYR HD1 H N N 345 TYR HD2 H N N 346 TYR HE1 H N N 347 TYR HE2 H N N 348 TYR HH H N N 349 TYR HXT H N N 350 VAL N N N N 351 VAL CA C N S 352 VAL C C N N 353 VAL O O N N 354 VAL CB C N N 355 VAL CG1 C N N 356 VAL CG2 C N N 357 VAL OXT O N N 358 VAL H H N N 359 VAL H2 H N N 360 VAL HA H N N 361 VAL HB H N N 362 VAL HG11 H N N 363 VAL HG12 H N N 364 VAL HG13 H N N 365 VAL HG21 H N N 366 VAL HG22 H N N 367 VAL HG23 H N N 368 VAL HXT H N N 369 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 MSE N CA sing N N 224 MSE N H sing N N 225 MSE N H2 sing N N 226 MSE CA C sing N N 227 MSE CA CB sing N N 228 MSE CA HA sing N N 229 MSE C O doub N N 230 MSE C OXT sing N N 231 MSE OXT HXT sing N N 232 MSE CB CG sing N N 233 MSE CB HB2 sing N N 234 MSE CB HB3 sing N N 235 MSE CG SE sing N N 236 MSE CG HG2 sing N N 237 MSE CG HG3 sing N N 238 MSE SE CE sing N N 239 MSE CE HE1 sing N N 240 MSE CE HE2 sing N N 241 MSE CE HE3 sing N N 242 PHE N CA sing N N 243 PHE N H sing N N 244 PHE N H2 sing N N 245 PHE CA C sing N N 246 PHE CA CB sing N N 247 PHE CA HA sing N N 248 PHE C O doub N N 249 PHE C OXT sing N N 250 PHE CB CG sing N N 251 PHE CB HB2 sing N N 252 PHE CB HB3 sing N N 253 PHE CG CD1 doub Y N 254 PHE CG CD2 sing Y N 255 PHE CD1 CE1 sing Y N 256 PHE CD1 HD1 sing N N 257 PHE CD2 CE2 doub Y N 258 PHE CD2 HD2 sing N N 259 PHE CE1 CZ doub Y N 260 PHE CE1 HE1 sing N N 261 PHE CE2 CZ sing Y N 262 PHE CE2 HE2 sing N N 263 PHE CZ HZ sing N N 264 PHE OXT HXT sing N N 265 PRO N CA sing N N 266 PRO N CD sing N N 267 PRO N H sing N N 268 PRO CA C sing N N 269 PRO CA CB sing N N 270 PRO CA HA sing N N 271 PRO C O doub N N 272 PRO C OXT sing N N 273 PRO CB CG sing N N 274 PRO CB HB2 sing N N 275 PRO CB HB3 sing N N 276 PRO CG CD sing N N 277 PRO CG HG2 sing N N 278 PRO CG HG3 sing N N 279 PRO CD HD2 sing N N 280 PRO CD HD3 sing N N 281 PRO OXT HXT sing N N 282 SER N CA sing N N 283 SER N H sing N N 284 SER N H2 sing N N 285 SER CA C sing N N 286 SER CA CB sing N N 287 SER CA HA sing N N 288 SER C O doub N N 289 SER C OXT sing N N 290 SER CB OG sing N N 291 SER CB HB2 sing N N 292 SER CB HB3 sing N N 293 SER OG HG sing N N 294 SER OXT HXT sing N N 295 THR N CA sing N N 296 THR N H sing N N 297 THR N H2 sing N N 298 THR CA C sing N N 299 THR CA CB sing N N 300 THR CA HA sing N N 301 THR C O doub N N 302 THR C OXT sing N N 303 THR CB OG1 sing N N 304 THR CB CG2 sing N N 305 THR CB HB sing N N 306 THR OG1 HG1 sing N N 307 THR CG2 HG21 sing N N 308 THR CG2 HG22 sing N N 309 THR CG2 HG23 sing N N 310 THR OXT HXT sing N N 311 TYR N CA sing N N 312 TYR N H sing N N 313 TYR N H2 sing N N 314 TYR CA C sing N N 315 TYR CA CB sing N N 316 TYR CA HA sing N N 317 TYR C O doub N N 318 TYR C OXT sing N N 319 TYR CB CG sing N N 320 TYR CB HB2 sing N N 321 TYR CB HB3 sing N N 322 TYR CG CD1 doub Y N 323 TYR CG CD2 sing Y N 324 TYR CD1 CE1 sing Y N 325 TYR CD1 HD1 sing N N 326 TYR CD2 CE2 doub Y N 327 TYR CD2 HD2 sing N N 328 TYR CE1 CZ doub Y N 329 TYR CE1 HE1 sing N N 330 TYR CE2 CZ sing Y N 331 TYR CE2 HE2 sing N N 332 TYR CZ OH sing N N 333 TYR OH HH sing N N 334 TYR OXT HXT sing N N 335 VAL N CA sing N N 336 VAL N H sing N N 337 VAL N H2 sing N N 338 VAL CA C sing N N 339 VAL CA CB sing N N 340 VAL CA HA sing N N 341 VAL C O doub N N 342 VAL C OXT sing N N 343 VAL CB CG1 sing N N 344 VAL CB CG2 sing N N 345 VAL CB HB sing N N 346 VAL CG1 HG11 sing N N 347 VAL CG1 HG12 sing N N 348 VAL CG1 HG13 sing N N 349 VAL CG2 HG21 sing N N 350 VAL CG2 HG22 sing N N 351 VAL CG2 HG23 sing N N 352 VAL OXT HXT sing N N 353 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2B18 _pdbx_initial_refinement_model.details 'PDB ENTRY 2B18' # _atom_sites.entry_id 2HGV _atom_sites.fract_transf_matrix[1][1] 0.028827 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011786 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018205 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O SE # loop_