HEADER STRUCTURAL PROTEIN 05-JUL-06 2HKQ TITLE CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN OF HUMAN EB1 IN COMPLEX TITLE 2 WITH THE CAP-GLY DOMAIN OF HUMAN DYNACTIN-1 (P150-GLUED) CAVEAT 2HKQ CHIRALITY ERRORS AT CA CENTER OF VAL A 254 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: C-TERMINAL DOMAIN; COMPND 5 SYNONYM: APC-BINDING PROTEIN EB1, END-BINDING PROTEIN 1, EB1; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DYNACTIN-1; COMPND 9 CHAIN: B; COMPND 10 FRAGMENT: CAP-GLY DOMAIN; COMPND 11 SYNONYM: 150 KDA DYNEIN-ASSOCIATED POLYPEPTIDE, DP-150, DAP-150, COMPND 12 P150-GLUED, P135; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MAPRE1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: DCTN1; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MICROTUBULE BINDING, DYNACTIN, CYTOSKELETON ASSOCIATED PROTEIN, KEYWDS 2 P150GLUED, EB1, +TIP PROTEIN COMPLEX STRUCTURE, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.HONNAPPA,F.K.WINKLER,M.O.STEINMETZ REVDAT 4 14-FEB-24 2HKQ 1 SEQADV REVDAT 3 13-JUL-11 2HKQ 1 VERSN REVDAT 2 24-FEB-09 2HKQ 1 VERSN REVDAT 1 12-SEP-06 2HKQ 0 JRNL AUTH S.HONNAPPA,O.OKHRIMENKO,R.JAUSSI,H.JAWHARI,I.JELESAROV, JRNL AUTH 2 F.K.WINKLER,M.O.STEINMETZ JRNL TITL KEY INTERACTION MODES OF DYNAMIC +TIP NETWORKS. JRNL REF MOL.CELL V. 23 663 2006 JRNL REFN ISSN 1097-2765 JRNL PMID 16949363 JRNL DOI 10.1016/J.MOLCEL.2006.07.013 REMARK 2 REMARK 2 RESOLUTION. 1.86 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.86 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.45 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 11978 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 616 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.86 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.91 REMARK 3 REFLECTION IN BIN (WORKING SET) : 823 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.19 REMARK 3 BIN R VALUE (WORKING SET) : 0.2880 REMARK 3 BIN FREE R VALUE SET COUNT : 48 REMARK 3 BIN FREE R VALUE : 0.3340 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1074 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 74 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.41 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.43000 REMARK 3 B22 (A**2) : -0.29000 REMARK 3 B33 (A**2) : -1.35000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.32000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.133 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.128 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.108 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.398 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1089 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1465 ; 1.440 ; 1.950 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 134 ; 8.526 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 56 ;34.192 ;24.643 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 195 ;12.907 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;13.660 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 164 ; 0.125 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 819 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 476 ; 0.199 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 769 ; 0.308 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 82 ; 0.168 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 85 ; 0.173 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 17 ; 0.176 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 674 ; 1.995 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1067 ; 3.137 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 451 ; 4.793 ; 4.500 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 398 ; 6.821 ; 6.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 194 A 255 REMARK 3 ORIGIN FOR THE GROUP (A): 24.2731 1.9286 2.0010 REMARK 3 T TENSOR REMARK 3 T11: -0.1647 T22: -0.0588 REMARK 3 T33: -0.1659 T12: 0.0292 REMARK 3 T13: 0.0457 T23: -0.0077 REMARK 3 L TENSOR REMARK 3 L11: 1.0549 L22: 6.5902 REMARK 3 L33: 1.4422 L12: 0.3483 REMARK 3 L13: 0.2365 L23: -0.7654 REMARK 3 S TENSOR REMARK 3 S11: 0.0065 S12: -0.0526 S13: -0.0479 REMARK 3 S21: -0.1563 S22: -0.1414 S23: 0.0885 REMARK 3 S31: 0.2498 S32: -0.0096 S33: 0.1349 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 26 B 97 REMARK 3 ORIGIN FOR THE GROUP (A): 8.1514 -2.0398 13.0950 REMARK 3 T TENSOR REMARK 3 T11: -0.1195 T22: -0.1051 REMARK 3 T33: -0.1239 T12: -0.0102 REMARK 3 T13: -0.0073 T23: -0.0163 REMARK 3 L TENSOR REMARK 3 L11: 6.3020 L22: 1.4127 REMARK 3 L33: 4.3439 L12: 1.2565 REMARK 3 L13: -0.2581 L23: 0.3694 REMARK 3 S TENSOR REMARK 3 S11: 0.0714 S12: 0.0064 S13: 0.2788 REMARK 3 S21: 0.0251 S22: -0.0398 S23: 0.2559 REMARK 3 S31: -0.0122 S32: -0.3711 S33: -0.0316 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2HKQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-AUG-06. REMARK 100 THE DEPOSITION ID IS D_1000038458. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-APR-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : ENRAF-NONIUS FR591 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : OSMIC MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12595 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.860 REMARK 200 RESOLUTION RANGE LOW (A) : 42.450 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.86 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.91 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.3 M TRISODIUM CITRATE, 0.1M HEPES REMARK 280 BUFFER, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 26.57800 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.79850 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 26.57800 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 39.79850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL ASSAMBLY IS DIMER OF EB1-C (CHAIN A) BINDS TWO REMARK 300 MONOMERS OF CAP-GLY DOMAIN(CHAIN B) THE BIOLOGICAL ASSEMBLY IS REMARK 300 GENERATED FROM THE HETERODIMER IN ASYMMETRIC UNIT BY THE OPERATION: REMARK 300 -X+1, Y, -Z REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 53.15600 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 189 REMARK 465 SER A 190 REMARK 465 ASP A 191 REMARK 465 PRO A 256 REMARK 465 ASP A 257 REMARK 465 GLU A 258 REMARK 465 GLY A 259 REMARK 465 GLY A 260 REMARK 465 PRO A 261 REMARK 465 GLN A 262 REMARK 465 GLU A 263 REMARK 465 GLU A 264 REMARK 465 GLN A 265 REMARK 465 GLU A 266 REMARK 465 GLU A 267 REMARK 465 TYR A 268 REMARK 465 GLY B 15 REMARK 465 SER B 16 REMARK 465 HIS B 17 REMARK 465 MET B 18 REMARK 465 SER B 19 REMARK 465 ALA B 20 REMARK 465 GLU B 21 REMARK 465 ALA B 22 REMARK 465 SER B 23 REMARK 465 ALA B 24 REMARK 465 ARG B 25 REMARK 465 GLU B 98 REMARK 465 ASP B 99 REMARK 465 GLY B 100 REMARK 465 ALA B 101 REMARK 465 ASP B 102 REMARK 465 THR B 103 REMARK 465 THR B 104 REMARK 465 SER B 105 REMARK 465 PRO B 106 REMARK 465 GLU B 107 REMARK 465 THR B 108 REMARK 465 PRO B 109 REMARK 465 ASP B 110 REMARK 465 SER B 111 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ASP B 82 C GLU B 83 N -0.346 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLY B 37 N - CA - C ANGL. DEV. = -18.4 DEGREES REMARK 500 LYS B 38 N - CA - C ANGL. DEV. = -20.6 DEGREES REMARK 500 GLY B 39 C - N - CA ANGL. DEV. = -13.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 250 -75.69 -95.24 REMARK 500 VAL A 254 45.48 123.09 REMARK 500 ALA B 65 62.53 -69.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1TXQ RELATED DB: PDB REMARK 900 RELATED ID: 2HKN RELATED DB: PDB REMARK 900 RELATED ID: 2HL3 RELATED DB: PDB REMARK 900 RELATED ID: 2HL5 RELATED DB: PDB DBREF 2HKQ A 191 268 UNP Q15691 MARE1_HUMAN 188 267 DBREF 2HKQ B 18 111 UNP Q14203 DYNA_HUMAN 15 111 SEQADV 2HKQ GLY A 189 UNP Q15691 CLONING ARTIFACT SEQADV 2HKQ SER A 190 UNP Q15691 CLONING ARTIFACT SEQADV 2HKQ GLY B 15 UNP Q14203 CLONING ARTIFACT SEQADV 2HKQ SER B 16 UNP Q14203 CLONING ARTIFACT SEQADV 2HKQ HIS B 17 UNP Q14203 CLONING ARTIFACT SEQRES 1 A 80 GLY SER ASP GLU ALA ALA GLU LEU MET GLN GLN VAL ASN SEQRES 2 A 80 VAL LEU LYS LEU THR VAL GLU ASP LEU GLU LYS GLU ARG SEQRES 3 A 80 ASP PHE TYR PHE GLY LYS LEU ARG ASN ILE GLU LEU ILE SEQRES 4 A 80 CYS GLN GLU ASN GLU GLY GLU ASN ASP PRO VAL LEU GLN SEQRES 5 A 80 ARG ILE VAL ASP ILE LEU TYR ALA THR ASP GLU GLY PHE SEQRES 6 A 80 VAL ILE PRO ASP GLU GLY GLY PRO GLN GLU GLU GLN GLU SEQRES 7 A 80 GLU TYR SEQRES 1 B 97 GLY SER HIS MET SER ALA GLU ALA SER ALA ARG PRO LEU SEQRES 2 B 97 ARG VAL GLY SER ARG VAL GLU VAL ILE GLY LYS GLY HIS SEQRES 3 B 97 ARG GLY THR VAL ALA TYR VAL GLY ALA THR LEU PHE ALA SEQRES 4 B 97 THR GLY LYS TRP VAL GLY VAL ILE LEU ASP GLU ALA LYS SEQRES 5 B 97 GLY LYS ASN ASP GLY THR VAL GLN GLY ARG LYS TYR PHE SEQRES 6 B 97 THR CYS ASP GLU GLY HIS GLY ILE PHE VAL ARG GLN SER SEQRES 7 B 97 GLN ILE GLN VAL PHE GLU ASP GLY ALA ASP THR THR SER SEQRES 8 B 97 PRO GLU THR PRO ASP SER FORMUL 3 HOH *74(H2 O) HELIX 1 1 GLU A 192 ASN A 231 1 40 HELIX 2 2 ASP A 236 TYR A 247 1 12 HELIX 3 3 ARG B 90 SER B 92 5 3 SHEET 1 A 5 GLY B 86 VAL B 89 0 SHEET 2 A 5 LYS B 56 LEU B 62 -1 N VAL B 58 O VAL B 89 SHEET 3 A 5 ARG B 41 ALA B 49 -1 N ALA B 45 O GLY B 59 SHEET 4 A 5 ARG B 32 VAL B 35 -1 N VAL B 33 O GLY B 42 SHEET 5 A 5 ILE B 94 VAL B 96 -1 O GLN B 95 N GLU B 34 SHEET 1 B 2 THR B 72 VAL B 73 0 SHEET 2 B 2 ARG B 76 LYS B 77 -1 O ARG B 76 N VAL B 73 CISPEP 1 PHE A 253 VAL A 254 0 -7.42 CISPEP 2 ILE B 36 GLY B 37 0 -8.26 CRYST1 53.156 79.597 38.935 90.00 109.29 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018813 0.000000 0.006585 0.00000 SCALE2 0.000000 0.012563 0.000000 0.00000 SCALE3 0.000000 0.000000 0.027212 0.00000