data_2HUH # _entry.id 2HUH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.286 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2HUH RCSB RCSB038775 WWPDB D_1000038775 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 359113 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 2HUH _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2006-07-26 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Crystal structure of putative DNA Mismatch Repair Protein (NP_811092.1) from Bacteroides Thetaiotaomicron VPI-5482 at 1.54 A resolution ; _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 # _cell.entry_id 2HUH _cell.length_a 43.043 _cell.length_b 43.043 _cell.length_c 167.295 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2HUH _symmetry.Int_Tables_number 96 _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative DNA mismatch repair protein' 16939.754 1 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 water nat water 18.015 163 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;RQPEVRGGDTLNVFLAYVPEDAKA(MSE)(MSE)TTPFEAYLVNDSNYYLYYTYLSAEGKAWNNRSHGLVEPNTKLLLEE FTKDVLNE(MSE)ERVAVQLIAFKDGKPAAIKPAVSVELRIDTVKFYKLHTFSASDFFEEPALIYDIVKDDVPAKQVYV ; _entity_poly.pdbx_seq_one_letter_code_can ;RQPEVRGGDTLNVFLAYVPEDAKAMMTTPFEAYLVNDSNYYLYYTYLSAEGKAWNNRSHGLVEPNTKLLLEEFTKDVLNE MERVAVQLIAFKDGKPAAIKPAVSVELRIDTVKFYKLHTFSASDFFEEPALIYDIVKDDVPAKQVYV ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 359113 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ARG n 1 2 GLN n 1 3 PRO n 1 4 GLU n 1 5 VAL n 1 6 ARG n 1 7 GLY n 1 8 GLY n 1 9 ASP n 1 10 THR n 1 11 LEU n 1 12 ASN n 1 13 VAL n 1 14 PHE n 1 15 LEU n 1 16 ALA n 1 17 TYR n 1 18 VAL n 1 19 PRO n 1 20 GLU n 1 21 ASP n 1 22 ALA n 1 23 LYS n 1 24 ALA n 1 25 MSE n 1 26 MSE n 1 27 THR n 1 28 THR n 1 29 PRO n 1 30 PHE n 1 31 GLU n 1 32 ALA n 1 33 TYR n 1 34 LEU n 1 35 VAL n 1 36 ASN n 1 37 ASP n 1 38 SER n 1 39 ASN n 1 40 TYR n 1 41 TYR n 1 42 LEU n 1 43 TYR n 1 44 TYR n 1 45 THR n 1 46 TYR n 1 47 LEU n 1 48 SER n 1 49 ALA n 1 50 GLU n 1 51 GLY n 1 52 LYS n 1 53 ALA n 1 54 TRP n 1 55 ASN n 1 56 ASN n 1 57 ARG n 1 58 SER n 1 59 HIS n 1 60 GLY n 1 61 LEU n 1 62 VAL n 1 63 GLU n 1 64 PRO n 1 65 ASN n 1 66 THR n 1 67 LYS n 1 68 LEU n 1 69 LEU n 1 70 LEU n 1 71 GLU n 1 72 GLU n 1 73 PHE n 1 74 THR n 1 75 LYS n 1 76 ASP n 1 77 VAL n 1 78 LEU n 1 79 ASN n 1 80 GLU n 1 81 MSE n 1 82 GLU n 1 83 ARG n 1 84 VAL n 1 85 ALA n 1 86 VAL n 1 87 GLN n 1 88 LEU n 1 89 ILE n 1 90 ALA n 1 91 PHE n 1 92 LYS n 1 93 ASP n 1 94 GLY n 1 95 LYS n 1 96 PRO n 1 97 ALA n 1 98 ALA n 1 99 ILE n 1 100 LYS n 1 101 PRO n 1 102 ALA n 1 103 VAL n 1 104 SER n 1 105 VAL n 1 106 GLU n 1 107 LEU n 1 108 ARG n 1 109 ILE n 1 110 ASP n 1 111 THR n 1 112 VAL n 1 113 LYS n 1 114 PHE n 1 115 TYR n 1 116 LYS n 1 117 LEU n 1 118 HIS n 1 119 THR n 1 120 PHE n 1 121 SER n 1 122 ALA n 1 123 SER n 1 124 ASP n 1 125 PHE n 1 126 PHE n 1 127 GLU n 1 128 GLU n 1 129 PRO n 1 130 ALA n 1 131 LEU n 1 132 ILE n 1 133 TYR n 1 134 ASP n 1 135 ILE n 1 136 VAL n 1 137 LYS n 1 138 ASP n 1 139 ASP n 1 140 VAL n 1 141 PRO n 1 142 ALA n 1 143 LYS n 1 144 GLN n 1 145 VAL n 1 146 TYR n 1 147 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Bacteroides _entity_src_gen.pdbx_gene_src_gene NP_811092.1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacteroides thetaiotaomicron' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 818 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8A5Q9_BACTN _struct_ref.pdbx_db_accession Q8A5Q9 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;RQPEVRGGDTLNVFLAYVPEDAKAMMTTPFEAYLVNDSNYYLYYTYLSAEGKAWNNRSHGLVEPNTKLLLEEFTKDVLNE MERVAVQLIAFKDGKPAAIKPAVSVELRIDTVKFYKLHTFSASDFFEEPALIYDIVKDDVPAKQVYV ; _struct_ref.pdbx_align_begin 81 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2HUH _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 147 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8A5Q9 _struct_ref_seq.db_align_beg 81 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 227 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 81 _struct_ref_seq.pdbx_auth_seq_align_end 227 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2HUH MSE A 25 ? UNP Q8A5Q9 MET 105 'MODIFIED RESIDUE' 105 1 1 2HUH MSE A 26 ? UNP Q8A5Q9 MET 106 'MODIFIED RESIDUE' 106 2 1 2HUH MSE A 81 ? UNP Q8A5Q9 MET 161 'MODIFIED RESIDUE' 161 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 2HUH # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 46.7 _exptl_crystal.density_Matthews 2.3 _exptl_crystal.description ? _exptl_crystal.density_meas ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP, NANODROP' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details '12.0% PEG-3000, 0.2M NaCl, 0.1M HEPES pH 7.5, VAPOR DIFFUSION, SITTING DROP, NANODROP, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat collimating mirror, toroid focusing mirror' _diffrn_detector.pdbx_collection_date 2006-07-02 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97922 1.0 3 0.97905 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL9-2 _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_wavelength_list 0.91837,0.97922,0.97905 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 2HUH _reflns.d_resolution_high 1.500 _reflns.d_resolution_low 30.002 _reflns.number_obs 23849 _reflns.pdbx_Rmerge_I_obs 0.076 _reflns.pdbx_netI_over_sigmaI 6.100 _reflns.pdbx_Rsym_value 0.076 _reflns.pdbx_redundancy 8.400 _reflns.percent_possible_obs 97.600 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.54 1.58 ? 6679 ? 0.767 1.0 0.767 ? 4.20 ? 1601 92.70 1 1 1.58 1.62 ? 8414 ? 0.585 1.3 0.585 ? 5.10 ? 1636 95.50 2 1 1.62 1.67 ? 10108 ? 0.492 1.6 0.492 ? 6.30 ? 1605 96.40 3 1 1.67 1.72 ? 9841 ? 0.399 1.9 0.399 ? 6.20 ? 1586 96.50 4 1 1.72 1.78 ? 9529 ? 0.279 2.7 0.279 ? 6.30 ? 1507 96.90 5 1 1.78 1.84 ? 9410 ? 0.219 3.5 0.219 ? 6.30 ? 1499 97.10 6 1 1.84 1.91 ? 8927 ? 0.169 4.4 0.169 ? 6.20 ? 1434 97.40 7 1 1.91 1.99 ? 8647 ? 0.13 5.4 0.13 ? 6.30 ? 1372 97.00 8 1 1.99 2.08 ? 8418 ? 0.111 5.7 0.111 ? 6.30 ? 1345 97.40 9 1 2.08 2.18 ? 10001 ? 0.117 5.6 0.117 ? 7.70 ? 1296 97.70 10 1 2.18 2.30 ? 12188 ? 0.121 5.4 0.121 ? 9.80 ? 1249 99.60 11 1 2.30 2.43 ? 14110 ? 0.108 6.0 0.108 ? 11.70 ? 1206 100.00 12 1 2.43 2.60 ? 14809 ? 0.1 6.3 0.1 ? 13.20 ? 1119 99.90 13 1 2.60 2.81 ? 14174 ? 0.095 6.8 0.095 ? 13.40 ? 1060 100.00 14 1 2.81 3.08 ? 13447 ? 0.082 7.4 0.082 ? 13.30 ? 1008 100.00 15 1 3.08 3.44 ? 12015 ? 0.068 8.6 0.068 ? 13.50 ? 890 100.00 16 1 3.44 3.98 ? 10687 ? 0.062 9.9 0.062 ? 13.20 ? 808 100.00 17 1 3.98 4.87 ? 9145 ? 0.056 10.9 0.056 ? 13.00 ? 704 100.00 18 1 4.87 6.89 ? 7113 ? 0.051 11.6 0.051 ? 12.50 ? 571 100.00 19 1 6.89 30.01 ? 3719 ? 0.045 12.4 0.045 ? 10.50 ? 353 98.30 20 1 # _refine.entry_id 2HUH _refine.ls_d_res_high 1.540 _refine.ls_d_res_low 30.002 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 97.380 _refine.ls_number_reflns_obs 23764 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. 4. MODEL REPRESENTS A PROTEOLYTIC FRAGMENT OF THE FULL-LENGTH PROTEIN, THOUGH THE EXACT BOUNDRIES ARE UNKOWN. RESIDUES 81-227 ARE MODELED BASED ON DENSITY. 5. UNKNOWN DENSITY NEAR ASP 89 WAS NOT MODELED. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.166 _refine.ls_R_factor_R_free 0.192 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1216 _refine.B_iso_mean 13.411 _refine.aniso_B[1][1] 0.100 _refine.aniso_B[2][2] 0.100 _refine.aniso_B[3][3] -0.190 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.970 _refine.correlation_coeff_Fo_to_Fc_free 0.966 _refine.pdbx_overall_ESU_R 0.075 _refine.pdbx_overall_ESU_R_Free 0.075 _refine.overall_SU_ML 0.049 _refine.overall_SU_B 2.722 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs 0.168 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1164 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 163 _refine_hist.number_atoms_total 1328 _refine_hist.d_res_high 1.540 _refine_hist.d_res_low 30.002 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1254 0.019 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1121 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1727 1.493 1.968 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 2620 0.742 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 166 7.645 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 60 38.188 25.333 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 203 11.378 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 3 4.205 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 196 0.094 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1421 0.007 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 253 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 200 0.199 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 1100 0.174 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 618 0.186 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 790 0.083 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 126 0.191 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 9 0.197 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 49 0.192 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 17 0.162 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 816 1.966 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 303 0.429 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1255 2.548 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 542 4.366 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 462 6.096 11.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.539 _refine_ls_shell.d_res_low 1.579 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 91.070 _refine_ls_shell.number_reflns_R_work 1506 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.261 _refine_ls_shell.R_factor_R_free 0.328 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 75 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 1581 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2HUH _struct.title 'Crystal structure of a duf2027 family protein (bt_2179) from bacteroides thetaiotaomicron at 1.54 A resolution' _struct.pdbx_descriptor 'Crystal structure of putative (NP_811092.1) from Bacteroides Thetaiotaomicron VPI-5482 at 1.54 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;Putative dna mismatch repair protein, structural genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, unknown function ; _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' _struct_keywords.entry_id 2HUH # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 74 ? MSE A 81 ? THR A 154 MSE A 161 5 ? 8 HELX_P HELX_P2 2 ASP A 110 ? PHE A 120 ? ASP A 190 PHE A 200 5 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? B MG . MG ? ? ? 1_555 A SER 123 O ? ? A MG 1 A SER 203 1_555 ? ? ? ? ? ? ? 2.206 ? metalc2 metalc ? ? B MG . MG ? ? ? 1_555 C HOH . O ? ? A MG 1 A HOH 275 1_555 ? ? ? ? ? ? ? 2.208 ? metalc3 metalc ? ? B MG . MG ? ? ? 1_555 C HOH . O ? ? A MG 1 A HOH 358 1_555 ? ? ? ? ? ? ? 2.869 ? metalc4 metalc ? ? B MG . MG ? ? ? 1_555 C HOH . O ? ? A MG 1 A HOH 322 1_555 ? ? ? ? ? ? ? 2.268 ? metalc5 metalc ? ? B MG . MG ? ? ? 1_555 C HOH . O ? ? A MG 1 A HOH 279 1_555 ? ? ? ? ? ? ? 2.367 ? metalc6 metalc ? ? B MG . MG ? ? ? 1_555 A PHE 126 O ? ? A MG 1 A PHE 206 1_555 ? ? ? ? ? ? ? 2.374 ? covale1 covale ? ? A ALA 24 C ? ? ? 1_555 A MSE 25 N ? ? A ALA 104 A MSE 105 1_555 ? ? ? ? ? ? ? 1.325 ? covale2 covale ? ? A MSE 25 C ? ? ? 1_555 A MSE 26 N ? ? A MSE 105 A MSE 106 1_555 ? ? ? ? ? ? ? 1.347 ? covale3 covale ? ? A MSE 26 C ? ? ? 1_555 A THR 27 N ? ? A MSE 106 A THR 107 1_555 ? ? ? ? ? ? ? 1.338 ? covale4 covale ? ? A GLU 80 C ? ? ? 1_555 A MSE 81 N ? ? A GLU 160 A MSE 161 1_555 ? ? ? ? ? ? ? 1.325 ? covale5 covale ? ? A MSE 81 C ? ? ? 1_555 A GLU 82 N ? ? A MSE 161 A GLU 162 1_555 ? ? ? ? ? ? ? 1.327 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? C ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 66 ? PHE A 73 ? THR A 146 PHE A 153 A 2 PHE A 30 ? ASN A 36 ? PHE A 110 ASN A 116 A 3 VAL A 13 ? PRO A 19 ? VAL A 93 PRO A 99 A 4 PHE A 126 ? LYS A 137 ? PHE A 206 LYS A 217 A 5 SER A 121 ? SER A 123 ? SER A 201 SER A 203 B 1 THR A 66 ? PHE A 73 ? THR A 146 PHE A 153 B 2 PHE A 30 ? ASN A 36 ? PHE A 110 ASN A 116 B 3 VAL A 13 ? PRO A 19 ? VAL A 93 PRO A 99 B 4 PHE A 126 ? LYS A 137 ? PHE A 206 LYS A 217 B 5 VAL A 140 ? PRO A 141 ? VAL A 220 PRO A 221 C 1 ALA A 53 ? VAL A 62 ? ALA A 133 VAL A 142 C 2 TYR A 41 ? GLU A 50 ? TYR A 121 GLU A 130 C 3 ARG A 83 ? PHE A 91 ? ARG A 163 PHE A 171 C 4 VAL A 103 ? ARG A 108 ? VAL A 183 ARG A 188 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LEU A 70 ? O LEU A 150 N ALA A 32 ? N ALA A 112 A 2 3 O VAL A 35 ? O VAL A 115 N PHE A 14 ? N PHE A 94 A 3 4 N LEU A 15 ? N LEU A 95 O TYR A 133 ? O TYR A 213 A 4 5 O ALA A 130 ? O ALA A 210 N SER A 121 ? N SER A 201 B 1 2 O LEU A 70 ? O LEU A 150 N ALA A 32 ? N ALA A 112 B 2 3 O VAL A 35 ? O VAL A 115 N PHE A 14 ? N PHE A 94 B 3 4 N LEU A 15 ? N LEU A 95 O TYR A 133 ? O TYR A 213 B 4 5 N LYS A 137 ? N LYS A 217 O VAL A 140 ? O VAL A 220 C 1 2 O ASN A 55 ? O ASN A 135 N SER A 48 ? N SER A 128 C 2 3 N TYR A 41 ? N TYR A 121 O PHE A 91 ? O PHE A 171 C 3 4 N LEU A 88 ? N LEU A 168 O VAL A 103 ? O VAL A 183 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 6 _struct_site.details 'BINDING SITE FOR RESIDUE MG A 1' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 SER A 123 ? SER A 203 . ? 1_555 ? 2 AC1 6 PHE A 126 ? PHE A 206 . ? 1_555 ? 3 AC1 6 HOH C . ? HOH A 275 . ? 1_555 ? 4 AC1 6 HOH C . ? HOH A 279 . ? 1_555 ? 5 AC1 6 HOH C . ? HOH A 322 . ? 1_555 ? 6 AC1 6 HOH C . ? HOH A 358 . ? 1_555 ? # _database_PDB_matrix.entry_id 2HUH _database_PDB_matrix.origx[1][1] 1.00000 _database_PDB_matrix.origx[1][2] 0.00000 _database_PDB_matrix.origx[1][3] 0.00000 _database_PDB_matrix.origx[2][1] 0.00000 _database_PDB_matrix.origx[2][2] 1.00000 _database_PDB_matrix.origx[2][3] 0.00000 _database_PDB_matrix.origx[3][1] 0.00000 _database_PDB_matrix.origx[3][2] 0.00000 _database_PDB_matrix.origx[3][3] 1.00000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2HUH _atom_sites.fract_transf_matrix[1][1] 0.02323 _atom_sites.fract_transf_matrix[1][2] 0.00000 _atom_sites.fract_transf_matrix[1][3] 0.00000 _atom_sites.fract_transf_matrix[2][1] 0.00000 _atom_sites.fract_transf_matrix[2][2] 0.02323 _atom_sites.fract_transf_matrix[2][3] 0.00000 _atom_sites.fract_transf_matrix[3][1] 0.00000 _atom_sites.fract_transf_matrix[3][2] 0.00000 _atom_sites.fract_transf_matrix[3][3] 0.00598 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ARG 1 81 81 ARG ARG A . n A 1 2 GLN 2 82 82 GLN GLN A . n A 1 3 PRO 3 83 83 PRO PRO A . n A 1 4 GLU 4 84 84 GLU GLU A . n A 1 5 VAL 5 85 85 VAL VAL A . n A 1 6 ARG 6 86 86 ARG ARG A . n A 1 7 GLY 7 87 87 GLY GLY A . n A 1 8 GLY 8 88 88 GLY GLY A . n A 1 9 ASP 9 89 89 ASP ASP A . n A 1 10 THR 10 90 90 THR THR A . n A 1 11 LEU 11 91 91 LEU LEU A . n A 1 12 ASN 12 92 92 ASN ASN A . n A 1 13 VAL 13 93 93 VAL VAL A . n A 1 14 PHE 14 94 94 PHE PHE A . n A 1 15 LEU 15 95 95 LEU LEU A . n A 1 16 ALA 16 96 96 ALA ALA A . n A 1 17 TYR 17 97 97 TYR TYR A . n A 1 18 VAL 18 98 98 VAL VAL A . n A 1 19 PRO 19 99 99 PRO PRO A . n A 1 20 GLU 20 100 100 GLU GLU A . n A 1 21 ASP 21 101 101 ASP ASP A . n A 1 22 ALA 22 102 102 ALA ALA A . n A 1 23 LYS 23 103 103 LYS LYS A . n A 1 24 ALA 24 104 104 ALA ALA A . n A 1 25 MSE 25 105 105 MSE MSE A . n A 1 26 MSE 26 106 106 MSE MSE A . n A 1 27 THR 27 107 107 THR THR A . n A 1 28 THR 28 108 108 THR THR A . n A 1 29 PRO 29 109 109 PRO PRO A . n A 1 30 PHE 30 110 110 PHE PHE A . n A 1 31 GLU 31 111 111 GLU GLU A . n A 1 32 ALA 32 112 112 ALA ALA A . n A 1 33 TYR 33 113 113 TYR TYR A . n A 1 34 LEU 34 114 114 LEU LEU A . n A 1 35 VAL 35 115 115 VAL VAL A . n A 1 36 ASN 36 116 116 ASN ASN A . n A 1 37 ASP 37 117 117 ASP ASP A . n A 1 38 SER 38 118 118 SER SER A . n A 1 39 ASN 39 119 119 ASN ASN A . n A 1 40 TYR 40 120 120 TYR TYR A . n A 1 41 TYR 41 121 121 TYR TYR A . n A 1 42 LEU 42 122 122 LEU LEU A . n A 1 43 TYR 43 123 123 TYR TYR A . n A 1 44 TYR 44 124 124 TYR TYR A . n A 1 45 THR 45 125 125 THR THR A . n A 1 46 TYR 46 126 126 TYR TYR A . n A 1 47 LEU 47 127 127 LEU LEU A . n A 1 48 SER 48 128 128 SER SER A . n A 1 49 ALA 49 129 129 ALA ALA A . n A 1 50 GLU 50 130 130 GLU GLU A . n A 1 51 GLY 51 131 131 GLY GLY A . n A 1 52 LYS 52 132 132 LYS LYS A . n A 1 53 ALA 53 133 133 ALA ALA A . n A 1 54 TRP 54 134 134 TRP TRP A . n A 1 55 ASN 55 135 135 ASN ASN A . n A 1 56 ASN 56 136 136 ASN ASN A . n A 1 57 ARG 57 137 137 ARG ARG A . n A 1 58 SER 58 138 138 SER SER A . n A 1 59 HIS 59 139 139 HIS HIS A . n A 1 60 GLY 60 140 140 GLY GLY A . n A 1 61 LEU 61 141 141 LEU LEU A . n A 1 62 VAL 62 142 142 VAL VAL A . n A 1 63 GLU 63 143 143 GLU GLU A . n A 1 64 PRO 64 144 144 PRO PRO A . n A 1 65 ASN 65 145 145 ASN ASN A . n A 1 66 THR 66 146 146 THR THR A . n A 1 67 LYS 67 147 147 LYS LYS A . n A 1 68 LEU 68 148 148 LEU LEU A . n A 1 69 LEU 69 149 149 LEU LEU A . n A 1 70 LEU 70 150 150 LEU LEU A . n A 1 71 GLU 71 151 151 GLU GLU A . n A 1 72 GLU 72 152 152 GLU GLU A . n A 1 73 PHE 73 153 153 PHE PHE A . n A 1 74 THR 74 154 154 THR THR A . n A 1 75 LYS 75 155 155 LYS LYS A . n A 1 76 ASP 76 156 156 ASP ASP A . n A 1 77 VAL 77 157 157 VAL VAL A . n A 1 78 LEU 78 158 158 LEU LEU A . n A 1 79 ASN 79 159 159 ASN ASN A . n A 1 80 GLU 80 160 160 GLU GLU A . n A 1 81 MSE 81 161 161 MSE MSE A . n A 1 82 GLU 82 162 162 GLU GLU A . n A 1 83 ARG 83 163 163 ARG ARG A . n A 1 84 VAL 84 164 164 VAL VAL A . n A 1 85 ALA 85 165 165 ALA ALA A . n A 1 86 VAL 86 166 166 VAL VAL A . n A 1 87 GLN 87 167 167 GLN GLN A . n A 1 88 LEU 88 168 168 LEU LEU A . n A 1 89 ILE 89 169 169 ILE ILE A . n A 1 90 ALA 90 170 170 ALA ALA A . n A 1 91 PHE 91 171 171 PHE PHE A . n A 1 92 LYS 92 172 172 LYS LYS A . n A 1 93 ASP 93 173 173 ASP ASP A . n A 1 94 GLY 94 174 174 GLY GLY A . n A 1 95 LYS 95 175 175 LYS LYS A . n A 1 96 PRO 96 176 176 PRO PRO A . n A 1 97 ALA 97 177 177 ALA ALA A . n A 1 98 ALA 98 178 178 ALA ALA A . n A 1 99 ILE 99 179 179 ILE ILE A . n A 1 100 LYS 100 180 180 LYS LYS A . n A 1 101 PRO 101 181 181 PRO PRO A . n A 1 102 ALA 102 182 182 ALA ALA A . n A 1 103 VAL 103 183 183 VAL VAL A . n A 1 104 SER 104 184 184 SER SER A . n A 1 105 VAL 105 185 185 VAL VAL A . n A 1 106 GLU 106 186 186 GLU GLU A . n A 1 107 LEU 107 187 187 LEU LEU A . n A 1 108 ARG 108 188 188 ARG ARG A . n A 1 109 ILE 109 189 189 ILE ILE A . n A 1 110 ASP 110 190 190 ASP ASP A . n A 1 111 THR 111 191 191 THR THR A . n A 1 112 VAL 112 192 192 VAL VAL A . n A 1 113 LYS 113 193 193 LYS LYS A . n A 1 114 PHE 114 194 194 PHE PHE A . n A 1 115 TYR 115 195 195 TYR TYR A . n A 1 116 LYS 116 196 196 LYS LYS A . n A 1 117 LEU 117 197 197 LEU LEU A . n A 1 118 HIS 118 198 198 HIS HIS A . n A 1 119 THR 119 199 199 THR THR A . n A 1 120 PHE 120 200 200 PHE PHE A . n A 1 121 SER 121 201 201 SER SER A . n A 1 122 ALA 122 202 202 ALA ALA A . n A 1 123 SER 123 203 203 SER SER A . n A 1 124 ASP 124 204 204 ASP ASP A . n A 1 125 PHE 125 205 205 PHE PHE A . n A 1 126 PHE 126 206 206 PHE PHE A . n A 1 127 GLU 127 207 207 GLU GLU A . n A 1 128 GLU 128 208 208 GLU GLU A . n A 1 129 PRO 129 209 209 PRO PRO A . n A 1 130 ALA 130 210 210 ALA ALA A . n A 1 131 LEU 131 211 211 LEU LEU A . n A 1 132 ILE 132 212 212 ILE ILE A . n A 1 133 TYR 133 213 213 TYR TYR A . n A 1 134 ASP 134 214 214 ASP ASP A . n A 1 135 ILE 135 215 215 ILE ILE A . n A 1 136 VAL 136 216 216 VAL VAL A . n A 1 137 LYS 137 217 217 LYS LYS A . n A 1 138 ASP 138 218 218 ASP ASP A . n A 1 139 ASP 139 219 219 ASP ASP A . n A 1 140 VAL 140 220 220 VAL VAL A . n A 1 141 PRO 141 221 221 PRO PRO A . n A 1 142 ALA 142 222 222 ALA ALA A . n A 1 143 LYS 143 223 223 LYS LYS A . n A 1 144 GLN 144 224 224 GLN GLN A . n A 1 145 VAL 145 225 225 VAL VAL A . n A 1 146 TYR 146 226 226 TYR TYR A . n A 1 147 VAL 147 227 227 VAL VAL A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 1 1 MG MG A . C 3 HOH 1 228 2 HOH HOH A . C 3 HOH 2 229 3 HOH HOH A . C 3 HOH 3 230 4 HOH HOH A . C 3 HOH 4 231 5 HOH HOH A . C 3 HOH 5 232 6 HOH HOH A . C 3 HOH 6 233 7 HOH HOH A . C 3 HOH 7 234 8 HOH HOH A . C 3 HOH 8 235 9 HOH HOH A . C 3 HOH 9 236 10 HOH HOH A . C 3 HOH 10 237 11 HOH HOH A . C 3 HOH 11 238 12 HOH HOH A . C 3 HOH 12 239 13 HOH HOH A . C 3 HOH 13 240 14 HOH HOH A . C 3 HOH 14 241 15 HOH HOH A . C 3 HOH 15 242 16 HOH HOH A . C 3 HOH 16 243 17 HOH HOH A . C 3 HOH 17 244 18 HOH HOH A . C 3 HOH 18 245 19 HOH HOH A . C 3 HOH 19 246 20 HOH HOH A . C 3 HOH 20 247 21 HOH HOH A . C 3 HOH 21 248 22 HOH HOH A . C 3 HOH 22 249 23 HOH HOH A . C 3 HOH 23 250 24 HOH HOH A . C 3 HOH 24 251 25 HOH HOH A . C 3 HOH 25 252 26 HOH HOH A . C 3 HOH 26 253 27 HOH HOH A . C 3 HOH 27 254 28 HOH HOH A . C 3 HOH 28 255 29 HOH HOH A . C 3 HOH 29 256 30 HOH HOH A . C 3 HOH 30 257 31 HOH HOH A . C 3 HOH 31 258 32 HOH HOH A . C 3 HOH 32 259 33 HOH HOH A . C 3 HOH 33 260 34 HOH HOH A . C 3 HOH 34 261 35 HOH HOH A . C 3 HOH 35 262 36 HOH HOH A . C 3 HOH 36 263 37 HOH HOH A . C 3 HOH 37 264 38 HOH HOH A . C 3 HOH 38 265 39 HOH HOH A . C 3 HOH 39 266 40 HOH HOH A . C 3 HOH 40 267 41 HOH HOH A . C 3 HOH 41 268 42 HOH HOH A . C 3 HOH 42 269 43 HOH HOH A . C 3 HOH 43 270 44 HOH HOH A . C 3 HOH 44 271 45 HOH HOH A . C 3 HOH 45 272 46 HOH HOH A . C 3 HOH 46 273 47 HOH HOH A . C 3 HOH 47 274 48 HOH HOH A . C 3 HOH 48 275 49 HOH HOH A . C 3 HOH 49 276 50 HOH HOH A . C 3 HOH 50 277 51 HOH HOH A . C 3 HOH 51 278 52 HOH HOH A . C 3 HOH 52 279 53 HOH HOH A . C 3 HOH 53 280 54 HOH HOH A . C 3 HOH 54 281 55 HOH HOH A . C 3 HOH 55 282 56 HOH HOH A . C 3 HOH 56 283 57 HOH HOH A . C 3 HOH 57 284 58 HOH HOH A . C 3 HOH 58 285 59 HOH HOH A . C 3 HOH 59 286 60 HOH HOH A . C 3 HOH 60 287 61 HOH HOH A . C 3 HOH 61 288 62 HOH HOH A . C 3 HOH 62 289 63 HOH HOH A . C 3 HOH 63 290 64 HOH HOH A . C 3 HOH 64 291 65 HOH HOH A . C 3 HOH 65 292 66 HOH HOH A . C 3 HOH 66 293 67 HOH HOH A . C 3 HOH 67 294 68 HOH HOH A . C 3 HOH 68 295 69 HOH HOH A . C 3 HOH 69 296 70 HOH HOH A . C 3 HOH 70 297 71 HOH HOH A . C 3 HOH 71 298 72 HOH HOH A . C 3 HOH 72 299 73 HOH HOH A . C 3 HOH 73 300 74 HOH HOH A . C 3 HOH 74 301 75 HOH HOH A . C 3 HOH 75 302 76 HOH HOH A . C 3 HOH 76 303 77 HOH HOH A . C 3 HOH 77 304 78 HOH HOH A . C 3 HOH 78 305 79 HOH HOH A . C 3 HOH 79 306 80 HOH HOH A . C 3 HOH 80 307 81 HOH HOH A . C 3 HOH 81 308 82 HOH HOH A . C 3 HOH 82 309 83 HOH HOH A . C 3 HOH 83 310 84 HOH HOH A . C 3 HOH 84 311 85 HOH HOH A . C 3 HOH 85 312 86 HOH HOH A . C 3 HOH 86 313 87 HOH HOH A . C 3 HOH 87 314 88 HOH HOH A . C 3 HOH 88 315 89 HOH HOH A . C 3 HOH 89 316 90 HOH HOH A . C 3 HOH 90 317 91 HOH HOH A . C 3 HOH 91 318 92 HOH HOH A . C 3 HOH 92 319 93 HOH HOH A . C 3 HOH 93 320 94 HOH HOH A . C 3 HOH 94 321 95 HOH HOH A . C 3 HOH 95 322 96 HOH HOH A . C 3 HOH 96 323 97 HOH HOH A . C 3 HOH 97 324 98 HOH HOH A . C 3 HOH 98 325 99 HOH HOH A . C 3 HOH 99 326 100 HOH HOH A . C 3 HOH 100 327 101 HOH HOH A . C 3 HOH 101 328 102 HOH HOH A . C 3 HOH 102 329 103 HOH HOH A . C 3 HOH 103 330 104 HOH HOH A . C 3 HOH 104 331 105 HOH HOH A . C 3 HOH 105 332 106 HOH HOH A . C 3 HOH 106 333 107 HOH HOH A . C 3 HOH 107 334 108 HOH HOH A . C 3 HOH 108 335 109 HOH HOH A . C 3 HOH 109 336 110 HOH HOH A . C 3 HOH 110 337 111 HOH HOH A . C 3 HOH 111 338 112 HOH HOH A . C 3 HOH 112 339 113 HOH HOH A . C 3 HOH 113 340 114 HOH HOH A . C 3 HOH 114 341 115 HOH HOH A . C 3 HOH 115 342 116 HOH HOH A . C 3 HOH 116 343 117 HOH HOH A . C 3 HOH 117 344 118 HOH HOH A . C 3 HOH 118 345 119 HOH HOH A . C 3 HOH 119 346 120 HOH HOH A . C 3 HOH 120 347 121 HOH HOH A . C 3 HOH 121 348 122 HOH HOH A . C 3 HOH 122 349 123 HOH HOH A . C 3 HOH 123 350 124 HOH HOH A . C 3 HOH 124 351 125 HOH HOH A . C 3 HOH 125 352 126 HOH HOH A . C 3 HOH 126 353 127 HOH HOH A . C 3 HOH 127 354 128 HOH HOH A . C 3 HOH 128 355 129 HOH HOH A . C 3 HOH 129 356 130 HOH HOH A . C 3 HOH 130 357 131 HOH HOH A . C 3 HOH 131 358 132 HOH HOH A . C 3 HOH 132 359 133 HOH HOH A . C 3 HOH 133 360 134 HOH HOH A . C 3 HOH 134 361 135 HOH HOH A . C 3 HOH 135 362 136 HOH HOH A . C 3 HOH 136 363 137 HOH HOH A . C 3 HOH 137 364 138 HOH HOH A . C 3 HOH 138 365 139 HOH HOH A . C 3 HOH 139 366 140 HOH HOH A . C 3 HOH 140 367 141 HOH HOH A . C 3 HOH 141 368 142 HOH HOH A . C 3 HOH 142 369 143 HOH HOH A . C 3 HOH 143 370 144 HOH HOH A . C 3 HOH 144 371 145 HOH HOH A . C 3 HOH 145 372 146 HOH HOH A . C 3 HOH 146 373 147 HOH HOH A . C 3 HOH 147 374 148 HOH HOH A . C 3 HOH 148 375 149 HOH HOH A . C 3 HOH 149 376 150 HOH HOH A . C 3 HOH 150 377 151 HOH HOH A . C 3 HOH 151 378 152 HOH HOH A . C 3 HOH 152 379 153 HOH HOH A . C 3 HOH 153 380 154 HOH HOH A . C 3 HOH 154 381 155 HOH HOH A . C 3 HOH 155 382 156 HOH HOH A . C 3 HOH 156 383 157 HOH HOH A . C 3 HOH 157 384 158 HOH HOH A . C 3 HOH 158 385 159 HOH HOH A . C 3 HOH 159 386 160 HOH HOH A . C 3 HOH 160 387 161 HOH HOH A . C 3 HOH 161 388 162 HOH HOH A . C 3 HOH 162 389 163 HOH HOH A . C 3 HOH 163 390 164 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 25 A MSE 105 ? MET SELENOMETHIONINE 2 A MSE 26 A MSE 106 ? MET SELENOMETHIONINE 3 A MSE 81 A MSE 161 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_555 -y,-x,-z+1/2 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 83.6475000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A SER 123 ? A SER 203 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? C HOH . ? A HOH 275 ? 1_555 91.2 ? 2 O ? A SER 123 ? A SER 203 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? C HOH . ? A HOH 358 ? 1_555 172.1 ? 3 O ? C HOH . ? A HOH 275 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? C HOH . ? A HOH 358 ? 1_555 90.9 ? 4 O ? A SER 123 ? A SER 203 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? C HOH . ? A HOH 322 ? 1_555 88.0 ? 5 O ? C HOH . ? A HOH 275 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? C HOH . ? A HOH 322 ? 1_555 94.9 ? 6 O ? C HOH . ? A HOH 358 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? C HOH . ? A HOH 322 ? 1_555 84.3 ? 7 O ? A SER 123 ? A SER 203 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? C HOH . ? A HOH 279 ? 1_555 92.1 ? 8 O ? C HOH . ? A HOH 275 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? C HOH . ? A HOH 279 ? 1_555 172.9 ? 9 O ? C HOH . ? A HOH 358 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? C HOH . ? A HOH 279 ? 1_555 86.7 ? 10 O ? C HOH . ? A HOH 322 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? C HOH . ? A HOH 279 ? 1_555 91.5 ? 11 O ? A SER 123 ? A SER 203 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? A PHE 126 ? A PHE 206 ? 1_555 88.1 ? 12 O ? C HOH . ? A HOH 275 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? A PHE 126 ? A PHE 206 ? 1_555 79.5 ? 13 O ? C HOH . ? A HOH 358 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? A PHE 126 ? A PHE 206 ? 1_555 99.8 ? 14 O ? C HOH . ? A HOH 322 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? A PHE 126 ? A PHE 206 ? 1_555 173.1 ? 15 O ? C HOH . ? A HOH 279 ? 1_555 MG ? B MG . ? A MG 1 ? 1_555 O ? A PHE 126 ? A PHE 206 ? 1_555 94.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-08-29 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' Advisory 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_unobs_or_zero_occ_atoms 2 4 'Structure model' software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 2.2570 _pdbx_refine_tls.origin_y 10.6040 _pdbx_refine_tls.origin_z 53.8780 _pdbx_refine_tls.T[1][1] 0.0812 _pdbx_refine_tls.T[2][2] 0.0311 _pdbx_refine_tls.T[3][3] 0.0245 _pdbx_refine_tls.T[1][2] 0.0101 _pdbx_refine_tls.T[1][3] -0.0133 _pdbx_refine_tls.T[2][3] -0.0022 _pdbx_refine_tls.L[1][1] 0.6646 _pdbx_refine_tls.L[2][2] 0.8039 _pdbx_refine_tls.L[3][3] 1.2147 _pdbx_refine_tls.L[1][2] 0.3927 _pdbx_refine_tls.L[1][3] 0.5166 _pdbx_refine_tls.L[2][3] 0.4366 _pdbx_refine_tls.S[1][1] -0.0486 _pdbx_refine_tls.S[2][2] 0.0210 _pdbx_refine_tls.S[3][3] 0.0276 _pdbx_refine_tls.S[1][2] -0.0482 _pdbx_refine_tls.S[1][3] 0.0458 _pdbx_refine_tls.S[2][3] -0.0130 _pdbx_refine_tls.S[2][1] 0.0318 _pdbx_refine_tls.S[3][1] -0.1017 _pdbx_refine_tls.S[3][2] -0.0553 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id 1 _pdbx_refine_tls_group.end_label_asym_id A _pdbx_refine_tls_group.end_label_seq_id 147 _pdbx_refine_tls_group.selection ALL _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 81 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 227 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.selection_details ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 1 SHELX . ? package 'George Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 2 REFMAC 5.2.0005 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 3 SCALA . ? other 'Phil Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/INDEX.html Fortran_77 ? 4 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 6 CCP4 '(SCALA)' ? ? ? ? 'data scaling' ? ? ? 7 SHELXD . ? ? ? ? phasing ? ? ? 8 autoSHARP . ? ? ? ? phasing ? ? ? 9 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OG1 A THR 154 ? ? OD1 A ASP 156 ? ? 2.09 2 1 O A HOH 297 ? ? O A HOH 374 ? ? 2.16 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 SE _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 MSE _pdbx_validate_rmsd_bond.auth_seq_id_1 106 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 A _pdbx_validate_rmsd_bond.auth_atom_id_2 CE _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 MSE _pdbx_validate_rmsd_bond.auth_seq_id_2 106 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 A _pdbx_validate_rmsd_bond.bond_value 1.487 _pdbx_validate_rmsd_bond.bond_target_value 1.950 _pdbx_validate_rmsd_bond.bond_deviation -0.463 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.059 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 219 ? ? 72.25 -2.78 2 1 ALA A 222 ? ? -84.89 44.54 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 81 ? NE ? A ARG 1 NE 2 1 Y 1 A ARG 81 ? CZ ? A ARG 1 CZ 3 1 Y 1 A ARG 81 ? NH1 ? A ARG 1 NH1 4 1 Y 1 A ARG 81 ? NH2 ? A ARG 1 NH2 5 1 Y 1 A ARG 86 ? CG ? A ARG 6 CG 6 1 Y 1 A ARG 86 ? CD ? A ARG 6 CD 7 1 Y 1 A ARG 86 ? NE ? A ARG 6 NE 8 1 Y 1 A ARG 86 ? CZ ? A ARG 6 CZ 9 1 Y 1 A ARG 86 ? NH1 ? A ARG 6 NH1 10 1 Y 1 A ARG 86 ? NH2 ? A ARG 6 NH2 11 1 Y 1 A LYS 132 ? CD ? A LYS 52 CD 12 1 Y 1 A LYS 132 ? CE ? A LYS 52 CE 13 1 Y 1 A LYS 132 ? NZ ? A LYS 52 NZ 14 1 Y 1 A LYS 217 ? CE ? A LYS 137 CE 15 1 Y 1 A LYS 217 ? NZ ? A LYS 137 NZ 16 1 Y 1 A LYS 223 ? CG ? A LYS 143 CG 17 1 Y 1 A LYS 223 ? CD ? A LYS 143 CD 18 1 Y 1 A LYS 223 ? CE ? A LYS 143 CE 19 1 Y 1 A LYS 223 ? NZ ? A LYS 143 NZ 20 1 Y 1 A GLN 224 ? CD ? A GLN 144 CD 21 1 Y 1 A GLN 224 ? OE1 ? A GLN 144 OE1 22 1 Y 1 A GLN 224 ? NE2 ? A GLN 144 NE2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 water HOH #