data_2HX5 # _entry.id 2HX5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2HX5 pdb_00002hx5 10.2210/pdb2hx5/pdb RCSB RCSB038863 ? ? WWPDB D_1000038863 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 366978 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 2HX5 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2006-08-02 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of hypothetical protein (NP_895880.1) from Prochlorococcus marinus MIT9313 at 1.50 A resolution' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 2HX5 _cell.length_a 104.220 _cell.length_b 104.220 _cell.length_c 104.220 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 24 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2HX5 _symmetry.Int_Tables_number 197 _symmetry.space_group_name_H-M 'I 2 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Hypothetical protein' 17526.422 1 ? ? ? ? 2 non-polymer syn 2-ETHOXYETHANOL 90.121 2 ? ? ? ? 3 water nat water 18.015 142 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)NPENWLLLRRVVRFGDTDAAGV(MSE)HFHQLFRWCHESWEESLESYGLNPADIFPGSRKSEVTPEVALPIIHC QADFRRPIHTGDALA(MSE)ELRPERLNPNSFQVHFEFRCEEQIAAHALIRHLAINAQTRHRCALPEGIDRWLEASGVGK IGSI ; _entity_poly.pdbx_seq_one_letter_code_can ;GMNPENWLLLRRVVRFGDTDAAGVMHFHQLFRWCHESWEESLESYGLNPADIFPGSRKSEVTPEVALPIIHCQADFRRPI HTGDALAMELRPERLNPNSFQVHFEFRCEEQIAAHALIRHLAINAQTRHRCALPEGIDRWLEASGVGKIGSI ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 366978 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 ASN n 1 4 PRO n 1 5 GLU n 1 6 ASN n 1 7 TRP n 1 8 LEU n 1 9 LEU n 1 10 LEU n 1 11 ARG n 1 12 ARG n 1 13 VAL n 1 14 VAL n 1 15 ARG n 1 16 PHE n 1 17 GLY n 1 18 ASP n 1 19 THR n 1 20 ASP n 1 21 ALA n 1 22 ALA n 1 23 GLY n 1 24 VAL n 1 25 MSE n 1 26 HIS n 1 27 PHE n 1 28 HIS n 1 29 GLN n 1 30 LEU n 1 31 PHE n 1 32 ARG n 1 33 TRP n 1 34 CYS n 1 35 HIS n 1 36 GLU n 1 37 SER n 1 38 TRP n 1 39 GLU n 1 40 GLU n 1 41 SER n 1 42 LEU n 1 43 GLU n 1 44 SER n 1 45 TYR n 1 46 GLY n 1 47 LEU n 1 48 ASN n 1 49 PRO n 1 50 ALA n 1 51 ASP n 1 52 ILE n 1 53 PHE n 1 54 PRO n 1 55 GLY n 1 56 SER n 1 57 ARG n 1 58 LYS n 1 59 SER n 1 60 GLU n 1 61 VAL n 1 62 THR n 1 63 PRO n 1 64 GLU n 1 65 VAL n 1 66 ALA n 1 67 LEU n 1 68 PRO n 1 69 ILE n 1 70 ILE n 1 71 HIS n 1 72 CYS n 1 73 GLN n 1 74 ALA n 1 75 ASP n 1 76 PHE n 1 77 ARG n 1 78 ARG n 1 79 PRO n 1 80 ILE n 1 81 HIS n 1 82 THR n 1 83 GLY n 1 84 ASP n 1 85 ALA n 1 86 LEU n 1 87 ALA n 1 88 MSE n 1 89 GLU n 1 90 LEU n 1 91 ARG n 1 92 PRO n 1 93 GLU n 1 94 ARG n 1 95 LEU n 1 96 ASN n 1 97 PRO n 1 98 ASN n 1 99 SER n 1 100 PHE n 1 101 GLN n 1 102 VAL n 1 103 HIS n 1 104 PHE n 1 105 GLU n 1 106 PHE n 1 107 ARG n 1 108 CYS n 1 109 GLU n 1 110 GLU n 1 111 GLN n 1 112 ILE n 1 113 ALA n 1 114 ALA n 1 115 HIS n 1 116 ALA n 1 117 LEU n 1 118 ILE n 1 119 ARG n 1 120 HIS n 1 121 LEU n 1 122 ALA n 1 123 ILE n 1 124 ASN n 1 125 ALA n 1 126 GLN n 1 127 THR n 1 128 ARG n 1 129 HIS n 1 130 ARG n 1 131 CYS n 1 132 ALA n 1 133 LEU n 1 134 PRO n 1 135 GLU n 1 136 GLY n 1 137 ILE n 1 138 ASP n 1 139 ARG n 1 140 TRP n 1 141 LEU n 1 142 GLU n 1 143 ALA n 1 144 SER n 1 145 GLY n 1 146 VAL n 1 147 GLY n 1 148 LYS n 1 149 ILE n 1 150 GLY n 1 151 SER n 1 152 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Prochlorococcus _entity_src_gen.pdbx_gene_src_gene NP_895880.1 _entity_src_gen.gene_src_species 'Prochlorococcus marinus' _entity_src_gen.gene_src_strain 'MIT 9313' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Prochlorococcus marinus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 74547 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q7V4A7_PROMM _struct_ref.pdbx_db_accession Q7V4A7 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2HX5 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 152 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q7V4A7 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 151 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 151 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2HX5 GLY A 1 ? UNP Q7V4A7 ? ? 'expression tag' 0 1 1 2HX5 MSE A 2 ? UNP Q7V4A7 MET 1 'modified residue' 1 2 1 2HX5 MSE A 25 ? UNP Q7V4A7 MET 24 'modified residue' 24 3 1 2HX5 MSE A 88 ? UNP Q7V4A7 MET 87 'modified residue' 87 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 ETX non-polymer . 2-ETHOXYETHANOL ? 'C4 H10 O2' 90.121 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 2HX5 # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 49.19 _exptl_crystal.density_Matthews 2.44 _exptl_crystal.description ? _exptl_crystal.density_meas ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION,SITTING DROP,NANODROP' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '35.0% 2-ethoxyethanol, 0.1M Cacodylate pH 6.5, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat collimating mirror, toroid focusing mirror' _diffrn_detector.pdbx_collection_date 2006-06-17 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL9-2 _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 2HX5 _reflns.d_resolution_high 1.500 _reflns.d_resolution_low 27.853 _reflns.number_obs 30132 _reflns.pdbx_Rmerge_I_obs 0.073 _reflns.pdbx_netI_over_sigmaI 11.550 _reflns.percent_possible_obs 95.300 _reflns.B_iso_Wilson_estimate 25.327 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.50 1.55 16454 ? ? 0.74 1.9 ? ? ? ? 4571 82.80 1 1 1.55 1.62 22469 ? ? 0.609 2.4 ? ? ? ? 5984 90.40 2 1 1.62 1.69 19316 ? ? 0.476 3.1 ? ? ? ? 5125 92.40 3 1 1.69 1.78 21019 ? ? 0.351 4.1 ? ? ? ? 5570 94.60 4 1 1.78 1.89 21209 ? ? 0.242 5.8 ? ? ? ? 5597 96.50 5 1 1.89 2.04 30688 ? ? 0.186 9.4 ? ? ? ? 5837 98.10 6 1 2.04 2.24 37955 ? ? 0.138 14.2 ? ? ? ? 5679 99.20 7 1 2.24 2.56 38662 ? ? 0.101 17.5 ? ? ? ? 5763 99.40 8 1 2.56 ? 39731 ? ? 0.07 22.5 ? ? ? ? 5919 99.80 9 1 # _refine.entry_id 2HX5 _refine.ls_d_res_high 1.500 _refine.ls_d_res_low 27.853 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.760 _refine.ls_number_reflns_obs 30131 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;(1) HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. (2) A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. (3) THERE IS UNKNOWN DENSITY NEAR GLU104. THIS WAS LEFT UNMODELED. THE UNKNOWN DENSITY IS LOCATED NEAR THE ACTIVE SITE OF THE PROTEIN. THIS COULD BE PART OF COA. (4). ATOM RECORDS CONTAIN RESIDUAL B FACTORS ONLY. ; _refine.ls_R_factor_all 0.157 _refine.ls_R_factor_R_work 0.155 _refine.ls_R_factor_R_free 0.182 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1524 _refine.B_iso_mean 17.349 _refine.correlation_coeff_Fo_to_Fc 0.974 _refine.correlation_coeff_Fo_to_Fc_free 0.965 _refine.pdbx_overall_ESU_R 0.058 _refine.pdbx_overall_ESU_R_Free 0.061 _refine.overall_SU_ML 0.042 _refine.overall_SU_B 2.317 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1169 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 12 _refine_hist.number_atoms_solvent 142 _refine_hist.number_atoms_total 1323 _refine_hist.d_res_high 1.500 _refine_hist.d_res_low 27.853 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1278 0.017 0.021 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 898 0.011 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1740 1.728 1.931 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 2152 1.379 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 157 5.934 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 68 31.018 22.353 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 203 11.886 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 15 23.087 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 179 0.162 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1472 0.008 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 295 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 225 0.227 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 917 0.210 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 605 0.179 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 673 0.089 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 94 0.154 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 9 0.182 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 56 0.314 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 22 0.146 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 915 2.635 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 299 0.484 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1240 2.957 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 565 4.962 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 500 7.260 11.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.501 _refine_ls_shell.d_res_low 1.540 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 97.420 _refine_ls_shell.number_reflns_R_work 2046 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.237 _refine_ls_shell.R_factor_R_free 0.321 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 110 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 2156 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2HX5 _struct.title 'Crystal structure of a putative thioesterase (pmt_2055) from prochlorococcus marinus str. mit 9313 at 1.50 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag Y _struct.pdbx_model_type_details ? # _struct_keywords.text ;Thioesterase/thiol ester dehydrase-isomerase fold, structural genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, hydrolase ; _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.entry_id 2HX5 # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ;SIZE EXCLUSION CHROMATOGRAPHY DATA SUPPORTS THE ASSIGNMENT OF A TETRAMER AS A BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 4 ? LEU A 8 ? PRO A 3 LEU A 7 1 ? 5 HELX_P HELX_P2 2 ARG A 15 ? THR A 19 ? ARG A 14 THR A 18 5 ? 5 HELX_P HELX_P3 3 HIS A 28 ? GLY A 46 ? HIS A 27 GLY A 45 1 ? 19 HELX_P HELX_P4 4 ASN A 48 ? PHE A 53 ? ASN A 47 PHE A 52 1 ? 6 HELX_P HELX_P5 5 PRO A 134 ? SER A 144 ? PRO A 133 SER A 143 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 2 C ? ? ? 1_555 A ASN 3 N ? ? A MSE 1 A ASN 2 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale2 covale both ? A VAL 24 C ? ? ? 1_555 A MSE 25 N ? ? A VAL 23 A MSE 24 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale3 covale both ? A MSE 25 C ? ? ? 1_555 A HIS 26 N ? ? A MSE 24 A HIS 25 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale4 covale both ? A ALA 87 C ? ? ? 1_555 A MSE 88 N ? ? A ALA 86 A MSE 87 1_555 ? ? ? ? ? ? ? 1.315 ? ? covale5 covale both ? A MSE 88 C ? ? ? 1_555 A GLU 89 N ? ? A MSE 87 A GLU 88 1_555 ? ? ? ? ? ? ? 1.319 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 9 ? VAL A 13 ? LEU A 8 VAL A 12 A 2 ALA A 85 ? ASN A 96 ? ALA A 84 ASN A 95 A 3 SER A 99 ? CYS A 108 ? SER A 98 CYS A 107 A 4 GLN A 111 ? LEU A 121 ? GLN A 110 LEU A 120 A 5 ILE A 69 ? PHE A 76 ? ILE A 68 PHE A 75 B 1 VAL A 65 ? ALA A 66 ? VAL A 64 ALA A 65 B 2 ILE A 123 ? ASN A 124 ? ILE A 122 ASN A 123 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 12 ? N ARG A 11 O LEU A 86 ? O LEU A 85 A 2 3 N ALA A 87 ? N ALA A 86 O ARG A 107 ? O ARG A 106 A 3 4 N PHE A 100 ? N PHE A 99 O HIS A 120 ? O HIS A 119 A 4 5 O ARG A 119 ? O ARG A 118 N HIS A 71 ? N HIS A 70 B 1 2 N ALA A 66 ? N ALA A 65 O ILE A 123 ? O ILE A 122 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ETX 152 ? 5 'BINDING SITE FOR RESIDUE ETX A 152' AC2 Software A ETX 153 ? 6 'BINDING SITE FOR RESIDUE ETX A 153' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 VAL A 14 ? VAL A 13 . ? 2_665 ? 2 AC1 5 ARG A 15 ? ARG A 14 . ? 2_665 ? 3 AC1 5 GLU A 39 ? GLU A 38 . ? 1_555 ? 4 AC1 5 PRO A 49 ? PRO A 48 . ? 1_555 ? 5 AC1 5 PHE A 53 ? PHE A 52 . ? 1_555 ? 6 AC2 6 PHE A 16 ? PHE A 15 . ? 2_665 ? 7 AC2 6 HIS A 35 ? HIS A 34 . ? 1_555 ? 8 AC2 6 ALA A 66 ? ALA A 65 . ? 1_555 ? 9 AC2 6 LEU A 67 ? LEU A 66 . ? 1_555 ? 10 AC2 6 HOH D . ? HOH A 161 . ? 4_565 ? 11 AC2 6 HOH D . ? HOH A 279 . ? 1_555 ? # _atom_sites.entry_id 2HX5 _atom_sites.fract_transf_matrix[1][1] 0.00960 _atom_sites.fract_transf_matrix[1][2] 0.00000 _atom_sites.fract_transf_matrix[1][3] 0.00000 _atom_sites.fract_transf_matrix[2][1] 0.00000 _atom_sites.fract_transf_matrix[2][2] 0.00960 _atom_sites.fract_transf_matrix[2][3] 0.00000 _atom_sites.fract_transf_matrix[3][1] 0.00000 _atom_sites.fract_transf_matrix[3][2] 0.00000 _atom_sites.fract_transf_matrix[3][3] 0.00960 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 ASN 3 2 2 ASN ASN A . n A 1 4 PRO 4 3 3 PRO PRO A . n A 1 5 GLU 5 4 4 GLU GLU A . n A 1 6 ASN 6 5 5 ASN ASN A . n A 1 7 TRP 7 6 6 TRP TRP A . n A 1 8 LEU 8 7 7 LEU LEU A . n A 1 9 LEU 9 8 8 LEU LEU A . n A 1 10 LEU 10 9 9 LEU LEU A . n A 1 11 ARG 11 10 10 ARG ARG A . n A 1 12 ARG 12 11 11 ARG ARG A . n A 1 13 VAL 13 12 12 VAL VAL A . n A 1 14 VAL 14 13 13 VAL VAL A . n A 1 15 ARG 15 14 14 ARG ARG A . n A 1 16 PHE 16 15 15 PHE PHE A . n A 1 17 GLY 17 16 16 GLY GLY A . n A 1 18 ASP 18 17 17 ASP ASP A . n A 1 19 THR 19 18 18 THR THR A . n A 1 20 ASP 20 19 19 ASP ASP A . n A 1 21 ALA 21 20 20 ALA ALA A . n A 1 22 ALA 22 21 21 ALA ALA A . n A 1 23 GLY 23 22 22 GLY GLY A . n A 1 24 VAL 24 23 23 VAL VAL A . n A 1 25 MSE 25 24 24 MSE MSE A . n A 1 26 HIS 26 25 25 HIS HIS A . n A 1 27 PHE 27 26 26 PHE PHE A . n A 1 28 HIS 28 27 27 HIS HIS A . n A 1 29 GLN 29 28 28 GLN GLN A . n A 1 30 LEU 30 29 29 LEU LEU A . n A 1 31 PHE 31 30 30 PHE PHE A . n A 1 32 ARG 32 31 31 ARG ARG A . n A 1 33 TRP 33 32 32 TRP TRP A . n A 1 34 CYS 34 33 33 CYS CYS A . n A 1 35 HIS 35 34 34 HIS HIS A . n A 1 36 GLU 36 35 35 GLU GLU A . n A 1 37 SER 37 36 36 SER SER A . n A 1 38 TRP 38 37 37 TRP TRP A . n A 1 39 GLU 39 38 38 GLU GLU A . n A 1 40 GLU 40 39 39 GLU GLU A . n A 1 41 SER 41 40 40 SER SER A . n A 1 42 LEU 42 41 41 LEU LEU A . n A 1 43 GLU 43 42 42 GLU GLU A . n A 1 44 SER 44 43 43 SER SER A . n A 1 45 TYR 45 44 44 TYR TYR A . n A 1 46 GLY 46 45 45 GLY GLY A . n A 1 47 LEU 47 46 46 LEU LEU A . n A 1 48 ASN 48 47 47 ASN ASN A . n A 1 49 PRO 49 48 48 PRO PRO A . n A 1 50 ALA 50 49 49 ALA ALA A . n A 1 51 ASP 51 50 50 ASP ASP A . n A 1 52 ILE 52 51 51 ILE ILE A . n A 1 53 PHE 53 52 52 PHE PHE A . n A 1 54 PRO 54 53 53 PRO PRO A . n A 1 55 GLY 55 54 54 GLY GLY A . n A 1 56 SER 56 55 55 SER SER A . n A 1 57 ARG 57 56 56 ARG ARG A . n A 1 58 LYS 58 57 57 LYS LYS A . n A 1 59 SER 59 58 58 SER SER A . n A 1 60 GLU 60 59 59 GLU GLU A . n A 1 61 VAL 61 60 60 VAL VAL A . n A 1 62 THR 62 61 61 THR THR A . n A 1 63 PRO 63 62 62 PRO PRO A . n A 1 64 GLU 64 63 63 GLU GLU A . n A 1 65 VAL 65 64 64 VAL VAL A . n A 1 66 ALA 66 65 65 ALA ALA A . n A 1 67 LEU 67 66 66 LEU LEU A . n A 1 68 PRO 68 67 67 PRO PRO A . n A 1 69 ILE 69 68 68 ILE ILE A . n A 1 70 ILE 70 69 69 ILE ILE A . n A 1 71 HIS 71 70 70 HIS HIS A . n A 1 72 CYS 72 71 71 CYS CYS A . n A 1 73 GLN 73 72 72 GLN GLN A . n A 1 74 ALA 74 73 73 ALA ALA A . n A 1 75 ASP 75 74 74 ASP ASP A . n A 1 76 PHE 76 75 75 PHE PHE A . n A 1 77 ARG 77 76 76 ARG ARG A . n A 1 78 ARG 78 77 77 ARG ARG A . n A 1 79 PRO 79 78 78 PRO PRO A . n A 1 80 ILE 80 79 79 ILE ILE A . n A 1 81 HIS 81 80 80 HIS HIS A . n A 1 82 THR 82 81 81 THR THR A . n A 1 83 GLY 83 82 82 GLY GLY A . n A 1 84 ASP 84 83 83 ASP ASP A . n A 1 85 ALA 85 84 84 ALA ALA A . n A 1 86 LEU 86 85 85 LEU LEU A . n A 1 87 ALA 87 86 86 ALA ALA A . n A 1 88 MSE 88 87 87 MSE MSE A . n A 1 89 GLU 89 88 88 GLU GLU A . n A 1 90 LEU 90 89 89 LEU LEU A . n A 1 91 ARG 91 90 90 ARG ARG A . n A 1 92 PRO 92 91 91 PRO PRO A . n A 1 93 GLU 93 92 92 GLU GLU A . n A 1 94 ARG 94 93 93 ARG ARG A . n A 1 95 LEU 95 94 94 LEU LEU A . n A 1 96 ASN 96 95 95 ASN ASN A . n A 1 97 PRO 97 96 96 PRO PRO A . n A 1 98 ASN 98 97 97 ASN ASN A . n A 1 99 SER 99 98 98 SER SER A . n A 1 100 PHE 100 99 99 PHE PHE A . n A 1 101 GLN 101 100 100 GLN GLN A . n A 1 102 VAL 102 101 101 VAL VAL A . n A 1 103 HIS 103 102 102 HIS HIS A . n A 1 104 PHE 104 103 103 PHE PHE A . n A 1 105 GLU 105 104 104 GLU GLU A . n A 1 106 PHE 106 105 105 PHE PHE A . n A 1 107 ARG 107 106 106 ARG ARG A . n A 1 108 CYS 108 107 107 CYS CYS A . n A 1 109 GLU 109 108 108 GLU GLU A . n A 1 110 GLU 110 109 109 GLU GLU A . n A 1 111 GLN 111 110 110 GLN GLN A . n A 1 112 ILE 112 111 111 ILE ILE A . n A 1 113 ALA 113 112 112 ALA ALA A . n A 1 114 ALA 114 113 113 ALA ALA A . n A 1 115 HIS 115 114 114 HIS HIS A . n A 1 116 ALA 116 115 115 ALA ALA A . n A 1 117 LEU 117 116 116 LEU LEU A . n A 1 118 ILE 118 117 117 ILE ILE A . n A 1 119 ARG 119 118 118 ARG ARG A . n A 1 120 HIS 120 119 119 HIS HIS A . n A 1 121 LEU 121 120 120 LEU LEU A . n A 1 122 ALA 122 121 121 ALA ALA A . n A 1 123 ILE 123 122 122 ILE ILE A . n A 1 124 ASN 124 123 123 ASN ASN A . n A 1 125 ALA 125 124 124 ALA ALA A . n A 1 126 GLN 126 125 125 GLN GLN A . n A 1 127 THR 127 126 126 THR THR A . n A 1 128 ARG 128 127 127 ARG ARG A . n A 1 129 HIS 129 128 128 HIS HIS A . n A 1 130 ARG 130 129 129 ARG ARG A . n A 1 131 CYS 131 130 130 CYS CYS A . n A 1 132 ALA 132 131 131 ALA ALA A . n A 1 133 LEU 133 132 132 LEU LEU A . n A 1 134 PRO 134 133 133 PRO PRO A . n A 1 135 GLU 135 134 134 GLU GLU A . n A 1 136 GLY 136 135 135 GLY GLY A . n A 1 137 ILE 137 136 136 ILE ILE A . n A 1 138 ASP 138 137 137 ASP ASP A . n A 1 139 ARG 139 138 138 ARG ARG A . n A 1 140 TRP 140 139 139 TRP TRP A . n A 1 141 LEU 141 140 140 LEU LEU A . n A 1 142 GLU 142 141 141 GLU GLU A . n A 1 143 ALA 143 142 142 ALA ALA A . n A 1 144 SER 144 143 143 SER SER A . n A 1 145 GLY 145 144 144 GLY GLY A . n A 1 146 VAL 146 145 ? ? ? A . n A 1 147 GLY 147 146 ? ? ? A . n A 1 148 LYS 148 147 ? ? ? A . n A 1 149 ILE 149 148 ? ? ? A . n A 1 150 GLY 150 149 ? ? ? A . n A 1 151 SER 151 150 ? ? ? A . n A 1 152 ILE 152 151 ? ? ? A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ETX 1 152 1 ETX ETX A . C 2 ETX 1 153 2 ETX ETX A . D 3 HOH 1 154 3 HOH HOH A . D 3 HOH 2 155 4 HOH HOH A . D 3 HOH 3 156 5 HOH HOH A . D 3 HOH 4 157 6 HOH HOH A . D 3 HOH 5 158 7 HOH HOH A . D 3 HOH 6 159 8 HOH HOH A . D 3 HOH 7 160 9 HOH HOH A . D 3 HOH 8 161 10 HOH HOH A . D 3 HOH 9 162 11 HOH HOH A . D 3 HOH 10 163 12 HOH HOH A . D 3 HOH 11 164 13 HOH HOH A . D 3 HOH 12 165 14 HOH HOH A . D 3 HOH 13 166 15 HOH HOH A . D 3 HOH 14 167 16 HOH HOH A . D 3 HOH 15 168 17 HOH HOH A . D 3 HOH 16 169 18 HOH HOH A . D 3 HOH 17 170 19 HOH HOH A . D 3 HOH 18 171 20 HOH HOH A . D 3 HOH 19 172 21 HOH HOH A . D 3 HOH 20 173 22 HOH HOH A . D 3 HOH 21 174 23 HOH HOH A . D 3 HOH 22 175 24 HOH HOH A . D 3 HOH 23 176 25 HOH HOH A . D 3 HOH 24 177 26 HOH HOH A . D 3 HOH 25 178 27 HOH HOH A . D 3 HOH 26 179 28 HOH HOH A . D 3 HOH 27 180 29 HOH HOH A . D 3 HOH 28 181 30 HOH HOH A . D 3 HOH 29 182 31 HOH HOH A . D 3 HOH 30 183 32 HOH HOH A . D 3 HOH 31 184 33 HOH HOH A . D 3 HOH 32 185 34 HOH HOH A . D 3 HOH 33 186 35 HOH HOH A . D 3 HOH 34 187 36 HOH HOH A . D 3 HOH 35 188 37 HOH HOH A . D 3 HOH 36 189 38 HOH HOH A . D 3 HOH 37 190 39 HOH HOH A . D 3 HOH 38 191 40 HOH HOH A . D 3 HOH 39 192 41 HOH HOH A . D 3 HOH 40 193 42 HOH HOH A . D 3 HOH 41 194 43 HOH HOH A . D 3 HOH 42 195 44 HOH HOH A . D 3 HOH 43 196 45 HOH HOH A . D 3 HOH 44 197 46 HOH HOH A . D 3 HOH 45 198 47 HOH HOH A . D 3 HOH 46 199 48 HOH HOH A . D 3 HOH 47 200 49 HOH HOH A . D 3 HOH 48 201 50 HOH HOH A . D 3 HOH 49 202 51 HOH HOH A . D 3 HOH 50 203 52 HOH HOH A . D 3 HOH 51 204 53 HOH HOH A . D 3 HOH 52 205 54 HOH HOH A . D 3 HOH 53 206 55 HOH HOH A . D 3 HOH 54 207 56 HOH HOH A . D 3 HOH 55 208 57 HOH HOH A . D 3 HOH 56 209 58 HOH HOH A . D 3 HOH 57 210 59 HOH HOH A . D 3 HOH 58 211 60 HOH HOH A . D 3 HOH 59 212 61 HOH HOH A . D 3 HOH 60 213 62 HOH HOH A . D 3 HOH 61 214 63 HOH HOH A . D 3 HOH 62 215 64 HOH HOH A . D 3 HOH 63 216 65 HOH HOH A . D 3 HOH 64 217 66 HOH HOH A . D 3 HOH 65 218 67 HOH HOH A . D 3 HOH 66 219 68 HOH HOH A . D 3 HOH 67 220 69 HOH HOH A . D 3 HOH 68 221 70 HOH HOH A . D 3 HOH 69 222 71 HOH HOH A . D 3 HOH 70 223 72 HOH HOH A . D 3 HOH 71 224 73 HOH HOH A . D 3 HOH 72 225 74 HOH HOH A . D 3 HOH 73 226 75 HOH HOH A . D 3 HOH 74 227 76 HOH HOH A . D 3 HOH 75 228 77 HOH HOH A . D 3 HOH 76 229 78 HOH HOH A . D 3 HOH 77 230 79 HOH HOH A . D 3 HOH 78 231 80 HOH HOH A . D 3 HOH 79 232 81 HOH HOH A . D 3 HOH 80 233 82 HOH HOH A . D 3 HOH 81 234 83 HOH HOH A . D 3 HOH 82 235 84 HOH HOH A . D 3 HOH 83 236 85 HOH HOH A . D 3 HOH 84 237 86 HOH HOH A . D 3 HOH 85 238 87 HOH HOH A . D 3 HOH 86 239 88 HOH HOH A . D 3 HOH 87 240 89 HOH HOH A . D 3 HOH 88 241 90 HOH HOH A . D 3 HOH 89 242 91 HOH HOH A . D 3 HOH 90 243 92 HOH HOH A . D 3 HOH 91 244 93 HOH HOH A . D 3 HOH 92 245 94 HOH HOH A . D 3 HOH 93 246 95 HOH HOH A . D 3 HOH 94 247 96 HOH HOH A . D 3 HOH 95 248 97 HOH HOH A . D 3 HOH 96 249 98 HOH HOH A . D 3 HOH 97 250 99 HOH HOH A . D 3 HOH 98 251 100 HOH HOH A . D 3 HOH 99 252 101 HOH HOH A . D 3 HOH 100 253 102 HOH HOH A . D 3 HOH 101 254 103 HOH HOH A . D 3 HOH 102 255 104 HOH HOH A . D 3 HOH 103 256 105 HOH HOH A . D 3 HOH 104 257 106 HOH HOH A . D 3 HOH 105 258 107 HOH HOH A . D 3 HOH 106 259 108 HOH HOH A . D 3 HOH 107 260 109 HOH HOH A . D 3 HOH 108 261 110 HOH HOH A . D 3 HOH 109 262 111 HOH HOH A . D 3 HOH 110 263 112 HOH HOH A . D 3 HOH 111 264 113 HOH HOH A . D 3 HOH 112 265 114 HOH HOH A . D 3 HOH 113 266 115 HOH HOH A . D 3 HOH 114 267 116 HOH HOH A . D 3 HOH 115 268 117 HOH HOH A . D 3 HOH 116 269 118 HOH HOH A . D 3 HOH 117 270 119 HOH HOH A . D 3 HOH 118 271 120 HOH HOH A . D 3 HOH 119 272 121 HOH HOH A . D 3 HOH 120 273 122 HOH HOH A . D 3 HOH 121 274 123 HOH HOH A . D 3 HOH 122 275 124 HOH HOH A . D 3 HOH 123 276 125 HOH HOH A . D 3 HOH 124 277 126 HOH HOH A . D 3 HOH 125 278 127 HOH HOH A . D 3 HOH 126 279 128 HOH HOH A . D 3 HOH 127 280 129 HOH HOH A . D 3 HOH 128 281 130 HOH HOH A . D 3 HOH 129 282 131 HOH HOH A . D 3 HOH 130 283 132 HOH HOH A . D 3 HOH 131 284 133 HOH HOH A . D 3 HOH 132 285 134 HOH HOH A . D 3 HOH 133 286 135 HOH HOH A . D 3 HOH 134 287 136 HOH HOH A . D 3 HOH 135 288 137 HOH HOH A . D 3 HOH 136 289 138 HOH HOH A . D 3 HOH 137 290 139 HOH HOH A . D 3 HOH 138 291 140 HOH HOH A . D 3 HOH 139 292 141 HOH HOH A . D 3 HOH 140 293 144 HOH HOH A . D 3 HOH 141 294 145 HOH HOH A . D 3 HOH 142 295 146 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 25 A MSE 24 ? MET SELENOMETHIONINE 3 A MSE 88 A MSE 87 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1.0000000000 0.0000000000 0.0000000000 104.2200000000 0.0000000000 -1.0000000000 0.0000000000 104.2200000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_655 -x+1,y,-z -1.0000000000 0.0000000000 0.0000000000 104.2200000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 4 'crystal symmetry operation' 4_565 x,-y+1,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 104.2200000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-08-15 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2017-10-25 6 'Structure model' 1 5 2023-01-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Source and taxonomy' 4 3 'Structure model' 'Version format compliance' 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Author supporting evidence' 7 6 'Structure model' 'Database references' 8 6 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' pdbx_struct_assembly_auth_evidence 3 6 'Structure model' database_2 4 6 'Structure model' struct_conn 5 6 'Structure model' struct_ref_seq_dif 6 6 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' 3 6 'Structure model' '_database_2.pdbx_DOI' 4 6 'Structure model' '_database_2.pdbx_database_accession' 5 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 6 'Structure model' '_struct_ref_seq_dif.details' 7 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 8 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 9 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 40.3951 _pdbx_refine_tls.origin_y 46.5673 _pdbx_refine_tls.origin_z 11.0461 _pdbx_refine_tls.T[1][1] -0.0305 _pdbx_refine_tls.T[2][2] -0.0352 _pdbx_refine_tls.T[3][3] -0.0196 _pdbx_refine_tls.T[1][2] 0.0078 _pdbx_refine_tls.T[1][3] 0.0254 _pdbx_refine_tls.T[2][3] 0.0109 _pdbx_refine_tls.L[1][1] 0.6636 _pdbx_refine_tls.L[2][2] 1.0044 _pdbx_refine_tls.L[3][3] 0.6211 _pdbx_refine_tls.L[1][2] -0.0713 _pdbx_refine_tls.L[1][3] 0.0037 _pdbx_refine_tls.L[2][3] 0.1947 _pdbx_refine_tls.S[1][1] 0.0048 _pdbx_refine_tls.S[2][2] -0.0144 _pdbx_refine_tls.S[3][3] 0.0096 _pdbx_refine_tls.S[1][2] -0.1046 _pdbx_refine_tls.S[1][3] -0.0117 _pdbx_refine_tls.S[2][3] 0.1252 _pdbx_refine_tls.S[2][1] 0.1618 _pdbx_refine_tls.S[3][1] 0.0422 _pdbx_refine_tls.S[3][2] 0.0178 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id 2 _pdbx_refine_tls_group.end_label_asym_id A _pdbx_refine_tls_group.end_label_seq_id 145 _pdbx_refine_tls_group.selection ALL _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 1 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 144 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.selection_details ? # _phasing.method SAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 1 SHELX . ? package 'George Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 2 REFMAC 5.2.0019 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 3 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/xscale_program.html ? ? 4 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 XDS . ? ? ? ? 'data reduction' ? ? ? 6 SHELXD . ? ? ? ? phasing ? ? ? 7 autoSHARP . ? ? ? ? phasing ? ? ? 8 # loop_ _pdbx_database_remark.id _pdbx_database_remark.text 300 ;BIOMOLECULE: 1 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT WHICH CONSISTS OF 1 CHAIN(S). SEE REMARK 350 FOR INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). SIZE EXCLUSION CHROMATOGRAPHY DATA SUPPORTS THE ASSIGNMENT OF A TETRAMER AS A BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE ; 999 ;SEQUENCE THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE ; # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 11 ? ? CZ A ARG 11 ? ? NH1 A ARG 11 ? ? 125.13 120.30 4.83 0.50 N 2 1 NE A ARG 14 ? ? CZ A ARG 14 ? ? NH1 A ARG 14 ? ? 123.60 120.30 3.30 0.50 N 3 1 NE A ARG 31 ? ? CZ A ARG 31 ? ? NH1 A ARG 31 ? ? 123.92 120.30 3.62 0.50 N 4 1 CB A ASP 74 ? ? CG A ASP 74 ? ? OD1 A ASP 74 ? ? 124.67 118.30 6.37 0.90 N 5 1 NE A ARG 90 ? ? CZ A ARG 90 ? ? NH2 A ARG 90 ? ? 117.29 120.30 -3.01 0.50 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id GLU _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 109 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 68.88 _pdbx_validate_torsion.psi -0.27 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 127 ? NE ? A ARG 128 NE 2 1 Y 1 A ARG 127 ? CZ ? A ARG 128 CZ 3 1 Y 1 A ARG 127 ? NH1 ? A ARG 128 NH1 4 1 Y 1 A ARG 127 ? NH2 ? A ARG 128 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A VAL 145 ? A VAL 146 3 1 Y 1 A GLY 146 ? A GLY 147 4 1 Y 1 A LYS 147 ? A LYS 148 5 1 Y 1 A ILE 148 ? A ILE 149 6 1 Y 1 A GLY 149 ? A GLY 150 7 1 Y 1 A SER 150 ? A SER 151 8 1 Y 1 A ILE 151 ? A ILE 152 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 2-ETHOXYETHANOL ETX 3 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #