data_2HYO # _entry.id 2HYO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2HYO pdb_00002hyo 10.2210/pdb2hyo/pdb RCSB RCSB038917 ? ? WWPDB D_1000038917 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-12-26 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2021-10-20 6 'Structure model' 1 5 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Source and taxonomy' 4 3 'Structure model' 'Version format compliance' 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' 8 6 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' database_2 3 5 'Structure model' pdbx_struct_conn_angle 4 5 'Structure model' struct_conn 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site 7 6 'Structure model' chem_comp_atom 8 6 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.contact_author' 3 4 'Structure model' '_software.contact_author_email' 4 4 'Structure model' '_software.date' 5 4 'Structure model' '_software.language' 6 4 'Structure model' '_software.location' 7 4 'Structure model' '_software.name' 8 4 'Structure model' '_software.type' 9 4 'Structure model' '_software.version' 10 5 'Structure model' '_database_2.pdbx_DOI' 11 5 'Structure model' '_database_2.pdbx_database_accession' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 20 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 21 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 22 5 'Structure model' '_pdbx_struct_conn_angle.value' 23 5 'Structure model' '_struct_conn.pdbx_dist_value' 24 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 25 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 26 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 27 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 28 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 29 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 30 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 31 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 32 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 33 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 34 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 35 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 36 5 'Structure model' '_struct_ref_seq_dif.details' 37 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 38 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 39 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 2HYO _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2006-08-07 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2HY1 'Crystal structure of wild type Rv0805' unspecified PDB 2HYP . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Shenoy, A.R.' 1 'Capuder, M.' 2 'Draskovic, P.' 3 'Lamba, D.' 4 'Visweswariah, S.S.' 5 'Podobnik, M.' 6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Structural and Biochemical Analysis of the Rv0805 Cyclic Nucleotide Phosphodiesterase from Mycobacterium tuberculosis.' J.Mol.Biol. 365 211 225 2007 JMOBAK UK 0022-2836 0070 ? 17059828 10.1016/j.jmb.2006.10.005 1 ;The Rv0805 Gene from Mycobacterium tuberculosis Encodes a 3',5'-Cyclic Nucleotide Phosphodiesterase: Biochemical and Mutational Analysis ; Biochemistry 44 15695 15704 2005 BICHAW US 0006-2960 0033 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Shenoy, A.R.' 1 ? primary 'Capuder, M.' 2 ? primary 'Draskovic, P.' 3 ? primary 'Lamba, D.' 4 ? primary 'Visweswariah, S.S.' 5 ? primary 'Podobnik, M.' 6 ? 1 'Shenoy, A.R.' 7 ? 1 'Sreenath, N.' 8 ? 1 'Podobnik, M.' 9 ? 1 'Kovacevic, M.' 10 ? 1 'Visweswariah, S.S.' 11 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Rv0805N97A 29914.959 1 3.1.4.17 N97A 'catalytic core (residues 3-278)' ? 2 non-polymer syn 'FE (III) ION' 55.845 1 ? ? ? ? 3 non-polymer syn 'MANGANESE (II) ION' 54.938 1 ? ? ? ? 4 water nat water 18.015 44 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Icc protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GAMDRLRAAEHPRPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRG LVEPFAAQLGAELVWVMGAHDDRAELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAEELAT PAPDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNATFVGIPVSVASATCYTQDLTVAAG GTRGRDGAQGCNLVHVYPDTVVHSVIPLGGGETVGTFVSP ; _entity_poly.pdbx_seq_one_letter_code_can ;GAMDRLRAAEHPRPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRG LVEPFAAQLGAELVWVMGAHDDRAELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAEELAT PAPDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNATFVGIPVSVASATCYTQDLTVAAG GTRGRDGAQGCNLVHVYPDTVVHSVIPLGGGETVGTFVSP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'FE (III) ION' FE 3 'MANGANESE (II) ION' MN 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 MET n 1 4 ASP n 1 5 ARG n 1 6 LEU n 1 7 ARG n 1 8 ALA n 1 9 ALA n 1 10 GLU n 1 11 HIS n 1 12 PRO n 1 13 ARG n 1 14 PRO n 1 15 ASP n 1 16 TYR n 1 17 VAL n 1 18 LEU n 1 19 LEU n 1 20 HIS n 1 21 ILE n 1 22 SER n 1 23 ASP n 1 24 THR n 1 25 HIS n 1 26 LEU n 1 27 ILE n 1 28 GLY n 1 29 GLY n 1 30 ASP n 1 31 ARG n 1 32 ARG n 1 33 LEU n 1 34 TYR n 1 35 GLY n 1 36 ALA n 1 37 VAL n 1 38 ASP n 1 39 ALA n 1 40 ASP n 1 41 ASP n 1 42 ARG n 1 43 LEU n 1 44 GLY n 1 45 GLU n 1 46 LEU n 1 47 LEU n 1 48 GLU n 1 49 GLN n 1 50 LEU n 1 51 ASN n 1 52 GLN n 1 53 SER n 1 54 GLY n 1 55 LEU n 1 56 ARG n 1 57 PRO n 1 58 ASP n 1 59 ALA n 1 60 ILE n 1 61 VAL n 1 62 PHE n 1 63 THR n 1 64 GLY n 1 65 ASP n 1 66 LEU n 1 67 ALA n 1 68 ASP n 1 69 LYS n 1 70 GLY n 1 71 GLU n 1 72 PRO n 1 73 ALA n 1 74 ALA n 1 75 TYR n 1 76 ARG n 1 77 LYS n 1 78 LEU n 1 79 ARG n 1 80 GLY n 1 81 LEU n 1 82 VAL n 1 83 GLU n 1 84 PRO n 1 85 PHE n 1 86 ALA n 1 87 ALA n 1 88 GLN n 1 89 LEU n 1 90 GLY n 1 91 ALA n 1 92 GLU n 1 93 LEU n 1 94 VAL n 1 95 TRP n 1 96 VAL n 1 97 MET n 1 98 GLY n 1 99 ALA n 1 100 HIS n 1 101 ASP n 1 102 ASP n 1 103 ARG n 1 104 ALA n 1 105 GLU n 1 106 LEU n 1 107 ARG n 1 108 LYS n 1 109 PHE n 1 110 LEU n 1 111 LEU n 1 112 ASP n 1 113 GLU n 1 114 ALA n 1 115 PRO n 1 116 SER n 1 117 MET n 1 118 ALA n 1 119 PRO n 1 120 LEU n 1 121 ASP n 1 122 ARG n 1 123 VAL n 1 124 CYS n 1 125 MET n 1 126 ILE n 1 127 ASP n 1 128 GLY n 1 129 LEU n 1 130 ARG n 1 131 ILE n 1 132 ILE n 1 133 VAL n 1 134 LEU n 1 135 ASP n 1 136 THR n 1 137 SER n 1 138 VAL n 1 139 PRO n 1 140 GLY n 1 141 HIS n 1 142 HIS n 1 143 HIS n 1 144 GLY n 1 145 GLU n 1 146 ILE n 1 147 ARG n 1 148 ALA n 1 149 SER n 1 150 GLN n 1 151 LEU n 1 152 GLY n 1 153 TRP n 1 154 LEU n 1 155 ALA n 1 156 GLU n 1 157 GLU n 1 158 LEU n 1 159 ALA n 1 160 THR n 1 161 PRO n 1 162 ALA n 1 163 PRO n 1 164 ASP n 1 165 GLY n 1 166 THR n 1 167 ILE n 1 168 LEU n 1 169 ALA n 1 170 LEU n 1 171 HIS n 1 172 HIS n 1 173 PRO n 1 174 PRO n 1 175 ILE n 1 176 PRO n 1 177 SER n 1 178 VAL n 1 179 LEU n 1 180 ASP n 1 181 MET n 1 182 ALA n 1 183 VAL n 1 184 THR n 1 185 VAL n 1 186 GLU n 1 187 LEU n 1 188 ARG n 1 189 ASP n 1 190 GLN n 1 191 ALA n 1 192 ALA n 1 193 LEU n 1 194 GLY n 1 195 ARG n 1 196 VAL n 1 197 LEU n 1 198 ARG n 1 199 GLY n 1 200 THR n 1 201 ASP n 1 202 VAL n 1 203 ARG n 1 204 ALA n 1 205 ILE n 1 206 LEU n 1 207 ALA n 1 208 GLY n 1 209 HIS n 1 210 LEU n 1 211 HIS n 1 212 TYR n 1 213 SER n 1 214 THR n 1 215 ASN n 1 216 ALA n 1 217 THR n 1 218 PHE n 1 219 VAL n 1 220 GLY n 1 221 ILE n 1 222 PRO n 1 223 VAL n 1 224 SER n 1 225 VAL n 1 226 ALA n 1 227 SER n 1 228 ALA n 1 229 THR n 1 230 CYS n 1 231 TYR n 1 232 THR n 1 233 GLN n 1 234 ASP n 1 235 LEU n 1 236 THR n 1 237 VAL n 1 238 ALA n 1 239 ALA n 1 240 GLY n 1 241 GLY n 1 242 THR n 1 243 ARG n 1 244 GLY n 1 245 ARG n 1 246 ASP n 1 247 GLY n 1 248 ALA n 1 249 GLN n 1 250 GLY n 1 251 CYS n 1 252 ASN n 1 253 LEU n 1 254 VAL n 1 255 HIS n 1 256 VAL n 1 257 TYR n 1 258 PRO n 1 259 ASP n 1 260 THR n 1 261 VAL n 1 262 VAL n 1 263 HIS n 1 264 SER n 1 265 VAL n 1 266 ILE n 1 267 PRO n 1 268 LEU n 1 269 GLY n 1 270 GLY n 1 271 GLY n 1 272 GLU n 1 273 THR n 1 274 VAL n 1 275 GLY n 1 276 THR n 1 277 PHE n 1 278 VAL n 1 279 SER n 1 280 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Mycobacterium _entity_src_gen.pdbx_gene_src_gene Rv0805 _entity_src_gen.gene_src_species 'Mycobacterium tuberculosis' _entity_src_gen.gene_src_strain H37Rv _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mycobacterium tuberculosis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83332 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pProExHTc _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FE non-polymer . 'FE (III) ION' ? 'Fe 3' 55.845 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 ? ? ? A . n A 1 2 ALA 2 0 ? ? ? A . n A 1 3 MET 3 1 ? ? ? A . n A 1 4 ASP 4 2 ? ? ? A . n A 1 5 ARG 5 3 ? ? ? A . n A 1 6 LEU 6 4 ? ? ? A . n A 1 7 ARG 7 5 ? ? ? A . n A 1 8 ALA 8 6 ? ? ? A . n A 1 9 ALA 9 7 ? ? ? A . n A 1 10 GLU 10 8 ? ? ? A . n A 1 11 HIS 11 9 ? ? ? A . n A 1 12 PRO 12 10 10 PRO PRO A . n A 1 13 ARG 13 11 11 ARG ARG A . n A 1 14 PRO 14 12 12 PRO PRO A . n A 1 15 ASP 15 13 13 ASP ASP A . n A 1 16 TYR 16 14 14 TYR TYR A . n A 1 17 VAL 17 15 15 VAL VAL A . n A 1 18 LEU 18 16 16 LEU LEU A . n A 1 19 LEU 19 17 17 LEU LEU A . n A 1 20 HIS 20 18 18 HIS HIS A . n A 1 21 ILE 21 19 19 ILE ILE A . n A 1 22 SER 22 20 20 SER SER A . n A 1 23 ASP 23 21 21 ASP ASP A . n A 1 24 THR 24 22 22 THR THR A . n A 1 25 HIS 25 23 23 HIS HIS A . n A 1 26 LEU 26 24 24 LEU LEU A . n A 1 27 ILE 27 25 25 ILE ILE A . n A 1 28 GLY 28 26 ? ? ? A . n A 1 29 GLY 29 27 ? ? ? A . n A 1 30 ASP 30 28 ? ? ? A . n A 1 31 ARG 31 29 ? ? ? A . n A 1 32 ARG 32 30 ? ? ? A . n A 1 33 LEU 33 31 ? ? ? A . n A 1 34 TYR 34 32 ? ? ? A . n A 1 35 GLY 35 33 ? ? ? A . n A 1 36 ALA 36 34 ? ? ? A . n A 1 37 VAL 37 35 ? ? ? A . n A 1 38 ASP 38 36 36 ASP ASP A . n A 1 39 ALA 39 37 37 ALA ALA A . n A 1 40 ASP 40 38 38 ASP ASP A . n A 1 41 ASP 41 39 39 ASP ASP A . n A 1 42 ARG 42 40 40 ARG ARG A . n A 1 43 LEU 43 41 41 LEU LEU A . n A 1 44 GLY 44 42 42 GLY GLY A . n A 1 45 GLU 45 43 43 GLU GLU A . n A 1 46 LEU 46 44 44 LEU LEU A . n A 1 47 LEU 47 45 45 LEU LEU A . n A 1 48 GLU 48 46 46 GLU GLU A . n A 1 49 GLN 49 47 47 GLN GLN A . n A 1 50 LEU 50 48 48 LEU LEU A . n A 1 51 ASN 51 49 49 ASN ASN A . n A 1 52 GLN 52 50 50 GLN GLN A . n A 1 53 SER 53 51 51 SER SER A . n A 1 54 GLY 54 52 52 GLY GLY A . n A 1 55 LEU 55 53 53 LEU LEU A . n A 1 56 ARG 56 54 54 ARG ARG A . n A 1 57 PRO 57 55 55 PRO PRO A . n A 1 58 ASP 58 56 56 ASP ASP A . n A 1 59 ALA 59 57 57 ALA ALA A . n A 1 60 ILE 60 58 58 ILE ILE A . n A 1 61 VAL 61 59 59 VAL VAL A . n A 1 62 PHE 62 60 60 PHE PHE A . n A 1 63 THR 63 61 61 THR THR A . n A 1 64 GLY 64 62 62 GLY GLY A . n A 1 65 ASP 65 63 63 ASP ASP A . n A 1 66 LEU 66 64 64 LEU LEU A . n A 1 67 ALA 67 65 65 ALA ALA A . n A 1 68 ASP 68 66 66 ASP ASP A . n A 1 69 LYS 69 67 67 LYS LYS A . n A 1 70 GLY 70 68 68 GLY GLY A . n A 1 71 GLU 71 69 69 GLU GLU A . n A 1 72 PRO 72 70 70 PRO PRO A . n A 1 73 ALA 73 71 71 ALA ALA A . n A 1 74 ALA 74 72 72 ALA ALA A . n A 1 75 TYR 75 73 73 TYR TYR A . n A 1 76 ARG 76 74 74 ARG ARG A . n A 1 77 LYS 77 75 75 LYS LYS A . n A 1 78 LEU 78 76 76 LEU LEU A . n A 1 79 ARG 79 77 77 ARG ARG A . n A 1 80 GLY 80 78 78 GLY GLY A . n A 1 81 LEU 81 79 79 LEU LEU A . n A 1 82 VAL 82 80 80 VAL VAL A . n A 1 83 GLU 83 81 81 GLU GLU A . n A 1 84 PRO 84 82 82 PRO PRO A . n A 1 85 PHE 85 83 83 PHE PHE A . n A 1 86 ALA 86 84 84 ALA ALA A . n A 1 87 ALA 87 85 85 ALA ALA A . n A 1 88 GLN 88 86 86 GLN GLN A . n A 1 89 LEU 89 87 87 LEU LEU A . n A 1 90 GLY 90 88 88 GLY GLY A . n A 1 91 ALA 91 89 89 ALA ALA A . n A 1 92 GLU 92 90 90 GLU GLU A . n A 1 93 LEU 93 91 91 LEU LEU A . n A 1 94 VAL 94 92 92 VAL VAL A . n A 1 95 TRP 95 93 93 TRP TRP A . n A 1 96 VAL 96 94 94 VAL VAL A . n A 1 97 MET 97 95 95 MET MET A . n A 1 98 GLY 98 96 96 GLY GLY A . n A 1 99 ALA 99 97 97 ALA ALA A . n A 1 100 HIS 100 98 98 HIS HIS A . n A 1 101 ASP 101 99 99 ASP ASP A . n A 1 102 ASP 102 100 100 ASP ASP A . n A 1 103 ARG 103 101 101 ARG ARG A . n A 1 104 ALA 104 102 102 ALA ALA A . n A 1 105 GLU 105 103 103 GLU GLU A . n A 1 106 LEU 106 104 104 LEU LEU A . n A 1 107 ARG 107 105 105 ARG ARG A . n A 1 108 LYS 108 106 106 LYS LYS A . n A 1 109 PHE 109 107 107 PHE PHE A . n A 1 110 LEU 110 108 108 LEU LEU A . n A 1 111 LEU 111 109 109 LEU LEU A . n A 1 112 ASP 112 110 110 ASP ASP A . n A 1 113 GLU 113 111 111 GLU GLU A . n A 1 114 ALA 114 112 112 ALA ALA A . n A 1 115 PRO 115 113 113 PRO PRO A . n A 1 116 SER 116 114 114 SER SER A . n A 1 117 MET 117 115 115 MET MET A . n A 1 118 ALA 118 116 116 ALA ALA A . n A 1 119 PRO 119 117 117 PRO PRO A . n A 1 120 LEU 120 118 118 LEU LEU A . n A 1 121 ASP 121 119 119 ASP ASP A . n A 1 122 ARG 122 120 120 ARG ARG A . n A 1 123 VAL 123 121 121 VAL VAL A . n A 1 124 CYS 124 122 122 CYS CYS A . n A 1 125 MET 125 123 123 MET MET A . n A 1 126 ILE 126 124 124 ILE ILE A . n A 1 127 ASP 127 125 125 ASP ASP A . n A 1 128 GLY 128 126 126 GLY GLY A . n A 1 129 LEU 129 127 127 LEU LEU A . n A 1 130 ARG 130 128 128 ARG ARG A . n A 1 131 ILE 131 129 129 ILE ILE A . n A 1 132 ILE 132 130 130 ILE ILE A . n A 1 133 VAL 133 131 131 VAL VAL A . n A 1 134 LEU 134 132 132 LEU LEU A . n A 1 135 ASP 135 133 133 ASP ASP A . n A 1 136 THR 136 134 134 THR THR A . n A 1 137 SER 137 135 135 SER SER A . n A 1 138 VAL 138 136 136 VAL VAL A . n A 1 139 PRO 139 137 137 PRO PRO A . n A 1 140 GLY 140 138 138 GLY GLY A . n A 1 141 HIS 141 139 139 HIS HIS A . n A 1 142 HIS 142 140 140 HIS HIS A . n A 1 143 HIS 143 141 141 HIS HIS A . n A 1 144 GLY 144 142 142 GLY GLY A . n A 1 145 GLU 145 143 143 GLU GLU A . n A 1 146 ILE 146 144 144 ILE ILE A . n A 1 147 ARG 147 145 145 ARG ARG A . n A 1 148 ALA 148 146 146 ALA ALA A . n A 1 149 SER 149 147 147 SER SER A . n A 1 150 GLN 150 148 148 GLN GLN A . n A 1 151 LEU 151 149 149 LEU LEU A . n A 1 152 GLY 152 150 150 GLY GLY A . n A 1 153 TRP 153 151 151 TRP TRP A . n A 1 154 LEU 154 152 152 LEU LEU A . n A 1 155 ALA 155 153 153 ALA ALA A . n A 1 156 GLU 156 154 154 GLU GLU A . n A 1 157 GLU 157 155 155 GLU GLU A . n A 1 158 LEU 158 156 156 LEU LEU A . n A 1 159 ALA 159 157 157 ALA ALA A . n A 1 160 THR 160 158 158 THR THR A . n A 1 161 PRO 161 159 159 PRO PRO A . n A 1 162 ALA 162 160 160 ALA ALA A . n A 1 163 PRO 163 161 161 PRO PRO A . n A 1 164 ASP 164 162 162 ASP ASP A . n A 1 165 GLY 165 163 163 GLY GLY A . n A 1 166 THR 166 164 164 THR THR A . n A 1 167 ILE 167 165 165 ILE ILE A . n A 1 168 LEU 168 166 166 LEU LEU A . n A 1 169 ALA 169 167 167 ALA ALA A . n A 1 170 LEU 170 168 168 LEU LEU A . n A 1 171 HIS 171 169 169 HIS HIS A . n A 1 172 HIS 172 170 170 HIS HIS A . n A 1 173 PRO 173 171 171 PRO PRO A . n A 1 174 PRO 174 172 172 PRO PRO A . n A 1 175 ILE 175 173 173 ILE ILE A . n A 1 176 PRO 176 174 174 PRO PRO A . n A 1 177 SER 177 175 175 SER SER A . n A 1 178 VAL 178 176 176 VAL VAL A . n A 1 179 LEU 179 177 177 LEU LEU A . n A 1 180 ASP 180 178 178 ASP ASP A . n A 1 181 MET 181 179 179 MET MET A . n A 1 182 ALA 182 180 180 ALA ALA A . n A 1 183 VAL 183 181 181 VAL VAL A . n A 1 184 THR 184 182 182 THR THR A . n A 1 185 VAL 185 183 183 VAL VAL A . n A 1 186 GLU 186 184 184 GLU GLU A . n A 1 187 LEU 187 185 185 LEU LEU A . n A 1 188 ARG 188 186 186 ARG ARG A . n A 1 189 ASP 189 187 187 ASP ASP A . n A 1 190 GLN 190 188 188 GLN GLN A . n A 1 191 ALA 191 189 189 ALA ALA A . n A 1 192 ALA 192 190 190 ALA ALA A . n A 1 193 LEU 193 191 191 LEU LEU A . n A 1 194 GLY 194 192 192 GLY GLY A . n A 1 195 ARG 195 193 193 ARG ARG A . n A 1 196 VAL 196 194 194 VAL VAL A . n A 1 197 LEU 197 195 195 LEU LEU A . n A 1 198 ARG 198 196 196 ARG ARG A . n A 1 199 GLY 199 197 197 GLY GLY A . n A 1 200 THR 200 198 198 THR THR A . n A 1 201 ASP 201 199 199 ASP ASP A . n A 1 202 VAL 202 200 200 VAL VAL A . n A 1 203 ARG 203 201 201 ARG ARG A . n A 1 204 ALA 204 202 202 ALA ALA A . n A 1 205 ILE 205 203 203 ILE ILE A . n A 1 206 LEU 206 204 204 LEU LEU A . n A 1 207 ALA 207 205 205 ALA ALA A . n A 1 208 GLY 208 206 206 GLY GLY A . n A 1 209 HIS 209 207 207 HIS HIS A . n A 1 210 LEU 210 208 208 LEU LEU A . n A 1 211 HIS 211 209 209 HIS HIS A . n A 1 212 TYR 212 210 210 TYR TYR A . n A 1 213 SER 213 211 211 SER SER A . n A 1 214 THR 214 212 212 THR THR A . n A 1 215 ASN 215 213 213 ASN ASN A . n A 1 216 ALA 216 214 214 ALA ALA A . n A 1 217 THR 217 215 215 THR THR A . n A 1 218 PHE 218 216 216 PHE PHE A . n A 1 219 VAL 219 217 217 VAL VAL A . n A 1 220 GLY 220 218 218 GLY GLY A . n A 1 221 ILE 221 219 219 ILE ILE A . n A 1 222 PRO 222 220 220 PRO PRO A . n A 1 223 VAL 223 221 221 VAL VAL A . n A 1 224 SER 224 222 222 SER SER A . n A 1 225 VAL 225 223 223 VAL VAL A . n A 1 226 ALA 226 224 224 ALA ALA A . n A 1 227 SER 227 225 225 SER SER A . n A 1 228 ALA 228 226 226 ALA ALA A . n A 1 229 THR 229 227 227 THR THR A . n A 1 230 CYS 230 228 228 CYS CYS A . n A 1 231 TYR 231 229 ? ? ? A . n A 1 232 THR 232 230 ? ? ? A . n A 1 233 GLN 233 231 ? ? ? A . n A 1 234 ASP 234 232 ? ? ? A . n A 1 235 LEU 235 233 ? ? ? A . n A 1 236 THR 236 234 ? ? ? A . n A 1 237 VAL 237 235 ? ? ? A . n A 1 238 ALA 238 236 ? ? ? A . n A 1 239 ALA 239 237 ? ? ? A . n A 1 240 GLY 240 238 ? ? ? A . n A 1 241 GLY 241 239 ? ? ? A . n A 1 242 THR 242 240 ? ? ? A . n A 1 243 ARG 243 241 ? ? ? A . n A 1 244 GLY 244 242 ? ? ? A . n A 1 245 ARG 245 243 ? ? ? A . n A 1 246 ASP 246 244 ? ? ? A . n A 1 247 GLY 247 245 ? ? ? A . n A 1 248 ALA 248 246 ? ? ? A . n A 1 249 GLN 249 247 ? ? ? A . n A 1 250 GLY 250 248 248 GLY GLY A . n A 1 251 CYS 251 249 249 CYS CYS A . n A 1 252 ASN 252 250 250 ASN ASN A . n A 1 253 LEU 253 251 251 LEU LEU A . n A 1 254 VAL 254 252 252 VAL VAL A . n A 1 255 HIS 255 253 253 HIS HIS A . n A 1 256 VAL 256 254 254 VAL VAL A . n A 1 257 TYR 257 255 255 TYR TYR A . n A 1 258 PRO 258 256 256 PRO PRO A . n A 1 259 ASP 259 257 257 ASP ASP A . n A 1 260 THR 260 258 258 THR THR A . n A 1 261 VAL 261 259 259 VAL VAL A . n A 1 262 VAL 262 260 260 VAL VAL A . n A 1 263 HIS 263 261 261 HIS HIS A . n A 1 264 SER 264 262 262 SER SER A . n A 1 265 VAL 265 263 263 VAL VAL A . n A 1 266 ILE 266 264 264 ILE ILE A . n A 1 267 PRO 267 265 265 PRO PRO A . n A 1 268 LEU 268 266 ? ? ? A . n A 1 269 GLY 269 267 ? ? ? A . n A 1 270 GLY 270 268 ? ? ? A . n A 1 271 GLY 271 269 ? ? ? A . n A 1 272 GLU 272 270 ? ? ? A . n A 1 273 THR 273 271 ? ? ? A . n A 1 274 VAL 274 272 ? ? ? A . n A 1 275 GLY 275 273 ? ? ? A . n A 1 276 THR 276 274 ? ? ? A . n A 1 277 PHE 277 275 ? ? ? A . n A 1 278 VAL 278 276 ? ? ? A . n A 1 279 SER 279 277 ? ? ? A . n A 1 280 PRO 280 278 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FE 1 444 444 FE FE A . C 3 MN 1 555 555 MN MN A . D 4 HOH 1 556 1 HOH HOH A . D 4 HOH 2 557 2 HOH HOH A . D 4 HOH 3 558 3 HOH HOH A . D 4 HOH 4 559 4 HOH HOH A . D 4 HOH 5 560 5 HOH HOH A . D 4 HOH 6 561 6 HOH HOH A . D 4 HOH 7 562 7 HOH HOH A . D 4 HOH 8 563 8 HOH HOH A . D 4 HOH 9 564 9 HOH HOH A . D 4 HOH 10 565 10 HOH HOH A . D 4 HOH 11 566 11 HOH HOH A . D 4 HOH 12 567 12 HOH HOH A . D 4 HOH 13 568 13 HOH HOH A . D 4 HOH 14 569 14 HOH HOH A . D 4 HOH 15 570 15 HOH HOH A . D 4 HOH 16 571 16 HOH HOH A . D 4 HOH 17 572 17 HOH HOH A . D 4 HOH 18 573 18 HOH HOH A . D 4 HOH 19 574 19 HOH HOH A . D 4 HOH 20 575 20 HOH HOH A . D 4 HOH 21 576 21 HOH HOH A . D 4 HOH 22 577 22 HOH HOH A . D 4 HOH 23 578 23 HOH HOH A . D 4 HOH 24 579 24 HOH HOH A . D 4 HOH 25 580 25 HOH HOH A . D 4 HOH 26 581 26 HOH HOH A . D 4 HOH 27 582 27 HOH HOH A . D 4 HOH 28 583 28 HOH HOH A . D 4 HOH 29 584 29 HOH HOH A . D 4 HOH 30 585 30 HOH HOH A . D 4 HOH 31 586 31 HOH HOH A . D 4 HOH 32 587 32 HOH HOH A . D 4 HOH 33 588 33 HOH HOH A . D 4 HOH 34 589 34 HOH HOH A . D 4 HOH 35 590 35 HOH HOH A . D 4 HOH 36 591 36 HOH HOH A . D 4 HOH 37 592 37 HOH HOH A . D 4 HOH 38 593 38 HOH HOH A . D 4 HOH 39 594 39 HOH HOH A . D 4 HOH 40 595 40 HOH HOH A . D 4 HOH 41 596 41 HOH HOH A . D 4 HOH 42 597 42 HOH HOH A . D 4 HOH 43 598 43 HOH HOH A . D 4 HOH 44 599 44 HOH HOH A . # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 PHASER . ? other 'R. J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC . ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 4 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 HKL-2000 . ? ? ? ? 'data collection' ? ? ? 6 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 7 # _cell.length_a 55.215 _cell.length_b 93.922 _cell.length_c 51.136 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 2HYO _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.entry_id 2HYO _symmetry.Int_Tables_number 18 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 2HYO _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.21 _exptl_crystal.density_percent_sol 44.47 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details 'MPD, MgCl2, MES, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2006-01-19 _diffrn_detector.details 'monochromator, mirrors' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'DOUBLE CRYSTAL (Si)' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.2 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ELETTRA BEAMLINE 5.2R' _diffrn_source.pdbx_wavelength_list 1.2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ELETTRA _diffrn_source.pdbx_synchrotron_beamline 5.2R # _reflns.entry_id 2HYO _reflns.d_resolution_high 2.25 _reflns.d_resolution_low 51.160 _reflns.number_obs 13212 _reflns.pdbx_Rmerge_I_obs 0.132 _reflns.pdbx_netI_over_sigmaI 9.500 _reflns.pdbx_chi_squared 1.002 _reflns.pdbx_redundancy 5.500 _reflns.percent_possible_obs 99.800 _reflns.observed_criterion_sigma_F 2.0 _reflns.observed_criterion_sigma_I 2.0 _reflns.number_all 13239 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.25 _reflns_shell.d_res_low 2.306 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.917 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 0.998 _reflns_shell.pdbx_redundancy 5.50 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 882 _reflns_shell.percent_possible_all 99.90 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2HYO _refine.ls_d_res_high 2.250 _refine.ls_d_res_low 51.160 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.750 _refine.ls_number_reflns_obs 13182 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.21 _refine.ls_R_factor_R_free 0.268 _refine.ls_percent_reflns_R_free 9.900 _refine.ls_number_reflns_R_free 1306 _refine.B_iso_mean 41.488 _refine.aniso_B[1][1] -3.830 _refine.aniso_B[2][2] -1.830 _refine.aniso_B[3][3] 5.670 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.957 _refine.correlation_coeff_Fo_to_Fc_free 0.934 _refine.pdbx_overall_ESU_R 0.297 _refine.pdbx_overall_ESU_R_Free 0.241 _refine.overall_SU_ML 0.199 _refine.overall_SU_B 16.407 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 13211 _refine.ls_R_factor_obs 0.315 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1724 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 44 _refine_hist.number_atoms_total 1770 _refine_hist.d_res_high 2.250 _refine_hist.d_res_low 51.160 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1761 0.010 0.021 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2404 1.241 1.974 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 224 5.464 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 74 35.096 23.243 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 273 16.524 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 14 17.384 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 285 0.080 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1330 0.004 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 730 0.190 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 1172 0.300 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 87 0.132 0.200 ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 1 0.003 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 29 0.156 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 8 0.117 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1161 0.421 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1822 0.714 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 660 1.137 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 582 1.575 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.25 _refine_ls_shell.d_res_low 2.306 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 98.750 _refine_ls_shell.number_reflns_R_work 875 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.281 _refine_ls_shell.R_factor_R_free 0.387 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 75 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 950 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2HYO _struct.title 'Crystal structure of Rv0805 N97A mutant' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2HYO _struct_keywords.text 'metallophosphoesterase, cAMP, phosphodiesterase, bi-nuclear active site, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code O06629_MYCTU _struct_ref.pdbx_db_accession O06629 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;RLRAAEHPRPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEP FAAQLGAELVWVMGNHDDRAELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAEELATPAPD GTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNATFVGIPVSVASATCYTQDLTVAAGGTRG RDGAQGCNLVHVYPDTVVHSVIPLGGGETVGTFVSP ; _struct_ref.pdbx_align_begin 3 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2HYO _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 280 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O06629 _struct_ref_seq.db_align_beg 3 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 278 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 3 _struct_ref_seq.pdbx_auth_seq_align_end 278 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2HYO GLY A 1 ? UNP O06629 ? ? 'cloning artifact' -1 1 1 2HYO ALA A 2 ? UNP O06629 ? ? 'cloning artifact' 0 2 1 2HYO MET A 3 ? UNP O06629 ? ? 'cloning artifact' 1 3 1 2HYO ASP A 4 ? UNP O06629 ? ? 'cloning artifact' 2 4 1 2HYO ALA A 99 ? UNP O06629 ASN 97 'engineered mutation' 97 5 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,-y,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.details 'The biological assembly is a dimer generated from the dimer in the asymmetric unit by the operations:-X,-Y,Z' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 38 ? SER A 53 ? ASP A 36 SER A 51 1 ? 16 HELX_P HELX_P2 2 GLU A 71 ? LEU A 89 ? GLU A 69 LEU A 87 1 ? 19 HELX_P HELX_P3 3 ASP A 102 ? LEU A 110 ? ASP A 100 LEU A 108 1 ? 9 HELX_P HELX_P4 4 ARG A 147 ? ALA A 159 ? ARG A 145 ALA A 157 1 ? 13 HELX_P HELX_P5 5 LEU A 179 ? GLU A 186 ? LEU A 177 GLU A 184 5 ? 8 HELX_P HELX_P6 6 ASP A 189 ? ARG A 198 ? ASP A 187 ARG A 196 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASP 23 OD1 ? ? ? 1_555 B FE . FE ? ? A ASP 21 A FE 444 1_555 ? ? ? ? ? ? ? 2.440 ? ? metalc2 metalc ? ? A HIS 25 NE2 ? ? ? 1_555 B FE . FE ? ? A HIS 23 A FE 444 1_555 ? ? ? ? ? ? ? 2.320 ? ? metalc3 metalc ? ? A ASP 65 OD2 ? ? ? 1_555 B FE . FE ? ? A ASP 63 A FE 444 1_555 ? ? ? ? ? ? ? 1.957 ? ? metalc4 metalc ? ? A ASP 65 OD2 ? ? ? 1_555 C MN . MN ? ? A ASP 63 A MN 555 1_555 ? ? ? ? ? ? ? 2.766 ? ? metalc5 metalc ? ? A HIS 171 NE2 ? ? ? 1_555 C MN . MN ? ? A HIS 169 A MN 555 1_555 ? ? ? ? ? ? ? 2.114 ? ? metalc6 metalc ? ? A HIS 209 ND1 ? ? ? 1_555 C MN . MN ? ? A HIS 207 A MN 555 1_555 ? ? ? ? ? ? ? 2.242 ? ? metalc7 metalc ? ? A HIS 211 NE2 ? ? ? 1_555 B FE . FE ? ? A HIS 209 A FE 444 1_555 ? ? ? ? ? ? ? 2.675 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 23 ? A ASP 21 ? 1_555 FE ? B FE . ? A FE 444 ? 1_555 NE2 ? A HIS 25 ? A HIS 23 ? 1_555 122.0 ? 2 OD1 ? A ASP 23 ? A ASP 21 ? 1_555 FE ? B FE . ? A FE 444 ? 1_555 OD2 ? A ASP 65 ? A ASP 63 ? 1_555 99.7 ? 3 NE2 ? A HIS 25 ? A HIS 23 ? 1_555 FE ? B FE . ? A FE 444 ? 1_555 OD2 ? A ASP 65 ? A ASP 63 ? 1_555 86.5 ? 4 OD1 ? A ASP 23 ? A ASP 21 ? 1_555 FE ? B FE . ? A FE 444 ? 1_555 NE2 ? A HIS 211 ? A HIS 209 ? 1_555 74.7 ? 5 NE2 ? A HIS 25 ? A HIS 23 ? 1_555 FE ? B FE . ? A FE 444 ? 1_555 NE2 ? A HIS 211 ? A HIS 209 ? 1_555 100.0 ? 6 OD2 ? A ASP 65 ? A ASP 63 ? 1_555 FE ? B FE . ? A FE 444 ? 1_555 NE2 ? A HIS 211 ? A HIS 209 ? 1_555 173.0 ? 7 OD2 ? A ASP 65 ? A ASP 63 ? 1_555 MN ? C MN . ? A MN 555 ? 1_555 NE2 ? A HIS 171 ? A HIS 169 ? 1_555 93.5 ? 8 OD2 ? A ASP 65 ? A ASP 63 ? 1_555 MN ? C MN . ? A MN 555 ? 1_555 ND1 ? A HIS 209 ? A HIS 207 ? 1_555 161.2 ? 9 NE2 ? A HIS 171 ? A HIS 169 ? 1_555 MN ? C MN . ? A MN 555 ? 1_555 ND1 ? A HIS 209 ? A HIS 207 ? 1_555 97.1 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 92 ? TRP A 95 ? GLU A 90 TRP A 93 A 2 ALA A 59 ? PHE A 62 ? ALA A 57 PHE A 60 A 3 TYR A 16 ? ILE A 21 ? TYR A 14 ILE A 19 A 4 CYS A 251 ? VAL A 256 ? CYS A 249 VAL A 254 A 5 VAL A 261 ? ILE A 266 ? VAL A 259 ILE A 264 B 1 ARG A 122 ? ILE A 126 ? ARG A 120 ILE A 124 B 2 LEU A 129 ? VAL A 133 ? LEU A 127 VAL A 131 B 3 THR A 166 ? ALA A 169 ? THR A 164 ALA A 167 B 4 VAL A 202 ? ALA A 207 ? VAL A 200 ALA A 205 B 5 ILE A 221 ? VAL A 225 ? ILE A 219 VAL A 223 B 6 THR A 214 ? PHE A 218 ? THR A 212 PHE A 216 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 94 ? O VAL A 92 N ILE A 60 ? N ILE A 58 A 2 3 O VAL A 61 ? O VAL A 59 N LEU A 19 ? N LEU A 17 A 3 4 N LEU A 18 ? N LEU A 16 O VAL A 254 ? O VAL A 252 A 4 5 N CYS A 251 ? N CYS A 249 O ILE A 266 ? O ILE A 264 B 1 2 N ILE A 126 ? N ILE A 124 O LEU A 129 ? O LEU A 127 B 2 3 N ILE A 132 ? N ILE A 130 O ALA A 169 ? O ALA A 167 B 3 4 N LEU A 168 ? N LEU A 166 O LEU A 206 ? O LEU A 204 B 4 5 N ILE A 205 ? N ILE A 203 O SER A 224 ? O SER A 222 B 5 6 O VAL A 223 ? O VAL A 221 N ALA A 216 ? N ALA A 214 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A FE 444 ? 5 'BINDING SITE FOR RESIDUE FE A 444' AC2 Software A MN 555 ? 4 'BINDING SITE FOR RESIDUE MN A 555' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ASP A 23 ? ASP A 21 . ? 1_555 ? 2 AC1 5 HIS A 25 ? HIS A 23 . ? 1_555 ? 3 AC1 5 ASP A 65 ? ASP A 63 . ? 1_555 ? 4 AC1 5 HIS A 211 ? HIS A 209 . ? 1_555 ? 5 AC1 5 MN C . ? MN A 555 . ? 1_555 ? 6 AC2 4 ASP A 65 ? ASP A 63 . ? 1_555 ? 7 AC2 4 HIS A 171 ? HIS A 169 . ? 1_555 ? 8 AC2 4 HIS A 209 ? HIS A 207 . ? 1_555 ? 9 AC2 4 FE B . ? FE A 444 . ? 1_555 ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 C _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 PRO _pdbx_validate_rmsd_bond.auth_seq_id_1 265 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 O _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 PRO _pdbx_validate_rmsd_bond.auth_seq_id_2 265 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.405 _pdbx_validate_rmsd_bond.bond_target_value 1.228 _pdbx_validate_rmsd_bond.bond_deviation 0.177 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.020 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 61 ? ? -94.37 46.12 2 1 ASP A 125 ? ? 50.96 -112.49 3 1 MET A 179 ? ? -58.74 2.32 4 1 HIS A 207 ? ? 79.58 -46.31 5 1 VAL A 217 ? ? 37.35 49.26 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.pdbx_refine_id 1 ? refined -17.7304 4.9458 -2.8140 0.0931 0.0905 0.5944 0.0197 -0.1004 -0.0359 23.8913 21.7942 18.9543 0.6169 -10.5003 -1.0379 -0.0736 -0.1629 0.2365 1.2278 -1.7131 2.4434 -0.6064 1.6828 -1.2242 'X-RAY DIFFRACTION' 2 ? refined -1.3238 14.8374 -15.5858 0.1488 0.3258 -0.0532 0.0068 -0.0467 0.0331 6.9782 6.2657 8.8687 2.1750 -1.2675 -3.3568 -0.0440 -0.1167 0.1607 0.9732 0.2566 -0.2701 -0.4038 -0.4786 0.5526 'X-RAY DIFFRACTION' 3 ? refined -5.8119 13.3401 -25.1000 0.8086 0.8161 -0.1242 0.1423 -0.0655 -0.0525 96.7299 13.8671 20.8114 23.4761 -23.5952 -2.3576 -1.8228 1.2816 0.5412 3.6137 0.7676 0.2296 -3.2347 0.1402 -1.4989 'X-RAY DIFFRACTION' 4 ? refined -16.8409 9.9884 -15.6011 0.4547 0.7620 0.5120 -0.2437 -0.0741 -0.0204 11.0642 5.0367 38.5618 4.8063 20.6115 9.6505 0.5389 0.7159 -1.2548 1.7606 -0.0873 0.1108 -1.1777 1.1388 -2.0300 'X-RAY DIFFRACTION' 5 ? refined 0.6304 21.1585 -15.7596 0.2142 0.2967 -0.0472 -0.0593 -0.0425 0.0640 6.8446 7.4105 4.5802 3.4758 -2.0768 -2.1677 -0.5702 0.4136 0.1566 0.9089 0.0193 -0.5917 -0.9177 0.1479 0.5133 'X-RAY DIFFRACTION' 6 ? refined -7.9106 23.8329 -18.8461 0.4418 0.4471 -0.0822 0.0359 -0.1577 0.1666 29.3916 11.2976 3.3447 7.1074 -2.6155 -0.1915 -0.3686 0.1655 0.2031 0.7795 0.3075 0.4111 -0.8073 -0.8329 -0.2010 'X-RAY DIFFRACTION' 7 ? refined -3.8654 21.7700 -11.1205 0.1018 0.0884 0.1537 0.0192 -0.0524 0.0375 8.8852 4.0929 4.1328 3.2874 -2.0118 -1.8191 -0.4368 0.3339 0.1030 0.9969 0.7920 0.1808 -0.3740 -0.4395 -0.2041 'X-RAY DIFFRACTION' 8 ? refined -2.0305 31.1151 -12.3625 0.2965 0.1085 0.5449 0.0116 -0.1422 0.1170 7.6436 15.7677 13.7736 1.4008 7.1149 2.9801 -0.3789 0.1846 0.1943 0.8375 0.4824 1.3835 -1.2169 -1.5856 -0.8282 'X-RAY DIFFRACTION' 9 ? refined 1.8850 31.5354 -5.5188 0.0951 -0.0511 0.4160 -0.0448 -0.0348 -0.0473 21.2351 27.5548 15.9502 17.1367 6.9096 -8.1377 -0.2117 -0.4455 0.6571 0.1005 2.0558 1.4702 0.3631 -1.1630 0.2131 'X-RAY DIFFRACTION' 10 ? refined -7.4845 21.5444 0.4194 0.0379 -0.0809 0.3916 0.1203 -0.1025 -0.0452 44.5172 25.1212 8.4106 32.3605 -17.0051 -10.6123 -0.4664 0.4368 0.0296 0.3526 1.0781 0.8171 -0.8225 -0.4937 -0.3233 'X-RAY DIFFRACTION' 11 ? refined -6.1194 17.3619 1.0615 0.0026 0.0310 -0.0284 -0.0022 -0.0240 -0.0121 5.2580 10.3395 1.3547 4.3285 2.6337 1.6774 -0.0108 -0.1222 0.1330 -0.0046 -0.3584 0.3839 -0.2052 -0.0736 0.1960 'X-RAY DIFFRACTION' 12 ? refined 13.2069 21.4189 -6.8473 0.0575 0.1445 0.4704 -0.0537 -0.0272 0.0744 23.4188 29.9668 3.7978 22.7597 -5.7741 -1.2953 -0.3344 0.2274 0.1070 0.2594 -0.3636 0.2749 -0.5195 -0.5713 0.6731 'X-RAY DIFFRACTION' 13 ? refined 8.3140 22.6559 4.9074 0.0456 0.1977 0.3407 -0.0231 -0.1425 -0.0633 7.9619 26.1390 1.2884 2.8820 0.7328 -5.2701 -0.4036 0.0215 0.3821 -0.6274 0.0538 -0.2911 -0.4527 -0.5716 1.2371 'X-RAY DIFFRACTION' 14 ? refined -1.8975 15.9252 4.2750 -0.0150 0.0132 0.0677 0.0258 -0.0794 -0.0330 9.4540 2.8796 1.9599 1.0923 0.1085 -0.7934 -0.2767 0.1207 0.1560 -0.4862 0.6716 -0.1898 0.4775 -0.0711 -0.3514 'X-RAY DIFFRACTION' 15 ? refined 15.5558 9.5059 -6.2917 0.2140 0.2310 0.3373 0.1020 0.0788 0.0788 17.2790 19.9746 3.9566 -1.7477 -0.8934 -6.4437 0.1016 -0.8185 0.7168 1.0804 0.0343 -1.6846 -1.8254 1.0714 0.9106 'X-RAY DIFFRACTION' 16 ? refined 9.3060 12.9661 7.5526 0.0699 0.0964 0.2907 0.0451 -0.1596 -0.0667 17.8756 0.3250 8.4932 -0.2221 2.8614 -1.6447 -1.1586 0.3160 0.8426 -1.6392 0.5304 -0.8317 0.6976 -0.2679 0.4759 'X-RAY DIFFRACTION' 17 ? refined -1.3774 9.3173 5.6811 0.0577 0.1431 -0.0870 0.0795 -0.0274 0.0043 13.2700 4.6923 8.7991 -1.2223 -4.7000 1.7414 -0.3162 0.2601 0.0562 -0.7247 0.3341 0.0889 0.4405 0.5718 0.4461 'X-RAY DIFFRACTION' 18 ? refined 4.6947 5.8250 -5.1800 0.0327 0.1206 0.1103 -0.0567 -0.0156 -0.0625 10.3108 8.2028 5.6124 -0.6865 -0.2202 3.0582 -0.0495 0.4492 -0.3997 0.5946 -0.2617 -0.0904 -0.6089 -0.3519 0.4954 'X-RAY DIFFRACTION' 19 ? refined -4.3418 7.1743 -11.9062 0.3870 0.3962 -0.1302 -0.0190 -0.0456 -0.0075 12.6779 5.4215 12.4028 -4.3019 4.1102 4.7159 -0.7230 -0.0350 0.7579 2.6688 0.3027 -0.5740 -0.8194 -1.0944 -0.7925 'X-RAY DIFFRACTION' 20 ? refined -8.6105 1.9338 -6.2640 0.1599 0.1247 0.3053 0.0542 -0.1043 -0.0888 9.7655 15.1236 2.4463 -7.0678 -2.0591 5.9778 0.3571 -0.8817 0.5246 0.7508 -1.1981 0.8602 -0.8345 -0.8478 -0.6100 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 12 A 17 ALL A 10 A 15 'X-RAY DIFFRACTION' ? 2 2 A 18 A 27 ALL A 16 A 25 'X-RAY DIFFRACTION' ? 3 3 A 38 A 49 ALL A 36 A 47 'X-RAY DIFFRACTION' ? 4 4 A 50 A 58 ALL A 48 A 56 'X-RAY DIFFRACTION' ? 5 5 A 59 A 74 ALL A 57 A 72 'X-RAY DIFFRACTION' ? 6 6 A 75 A 86 ALL A 73 A 84 'X-RAY DIFFRACTION' ? 7 7 A 87 A 104 ALL A 85 A 102 'X-RAY DIFFRACTION' ? 8 8 A 105 A 112 ALL A 103 A 110 'X-RAY DIFFRACTION' ? 9 9 A 113 A 120 ALL A 111 A 118 'X-RAY DIFFRACTION' ? 10 10 A 121 A 126 ALL A 119 A 124 'X-RAY DIFFRACTION' ? 11 11 A 127 A 135 ALL A 125 A 133 'X-RAY DIFFRACTION' ? 12 12 A 136 A 145 ALL A 134 A 143 'X-RAY DIFFRACTION' ? 13 13 A 146 A 152 ALL A 144 A 150 'X-RAY DIFFRACTION' ? 14 14 A 153 A 174 ALL A 151 A 172 'X-RAY DIFFRACTION' ? 15 15 A 175 A 189 ALL A 173 A 187 'X-RAY DIFFRACTION' ? 16 16 A 190 A 196 ALL A 188 A 194 'X-RAY DIFFRACTION' ? 17 17 A 197 A 206 ALL A 195 A 204 'X-RAY DIFFRACTION' ? 18 18 A 207 A 224 ALL A 205 A 222 'X-RAY DIFFRACTION' ? 19 19 A 225 A 256 ALL A 223 A 254 'X-RAY DIFFRACTION' ? 20 20 A 257 A 267 ALL A 255 A 265 'X-RAY DIFFRACTION' ? # _pdbx_phasing_MR.entry_id 2HYO _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.250 _pdbx_phasing_MR.d_res_low_rotation 37.520 _pdbx_phasing_MR.d_res_high_translation 2.250 _pdbx_phasing_MR.d_res_low_translation 37.520 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -1 ? A GLY 1 2 1 Y 1 A ALA 0 ? A ALA 2 3 1 Y 1 A MET 1 ? A MET 3 4 1 Y 1 A ASP 2 ? A ASP 4 5 1 Y 1 A ARG 3 ? A ARG 5 6 1 Y 1 A LEU 4 ? A LEU 6 7 1 Y 1 A ARG 5 ? A ARG 7 8 1 Y 1 A ALA 6 ? A ALA 8 9 1 Y 1 A ALA 7 ? A ALA 9 10 1 Y 1 A GLU 8 ? A GLU 10 11 1 Y 1 A HIS 9 ? A HIS 11 12 1 Y 1 A GLY 26 ? A GLY 28 13 1 Y 1 A GLY 27 ? A GLY 29 14 1 Y 1 A ASP 28 ? A ASP 30 15 1 Y 1 A ARG 29 ? A ARG 31 16 1 Y 1 A ARG 30 ? A ARG 32 17 1 Y 1 A LEU 31 ? A LEU 33 18 1 Y 1 A TYR 32 ? A TYR 34 19 1 Y 1 A GLY 33 ? A GLY 35 20 1 Y 1 A ALA 34 ? A ALA 36 21 1 Y 1 A VAL 35 ? A VAL 37 22 1 Y 1 A TYR 229 ? A TYR 231 23 1 Y 1 A THR 230 ? A THR 232 24 1 Y 1 A GLN 231 ? A GLN 233 25 1 Y 1 A ASP 232 ? A ASP 234 26 1 Y 1 A LEU 233 ? A LEU 235 27 1 Y 1 A THR 234 ? A THR 236 28 1 Y 1 A VAL 235 ? A VAL 237 29 1 Y 1 A ALA 236 ? A ALA 238 30 1 Y 1 A ALA 237 ? A ALA 239 31 1 Y 1 A GLY 238 ? A GLY 240 32 1 Y 1 A GLY 239 ? A GLY 241 33 1 Y 1 A THR 240 ? A THR 242 34 1 Y 1 A ARG 241 ? A ARG 243 35 1 Y 1 A GLY 242 ? A GLY 244 36 1 Y 1 A ARG 243 ? A ARG 245 37 1 Y 1 A ASP 244 ? A ASP 246 38 1 Y 1 A GLY 245 ? A GLY 247 39 1 Y 1 A ALA 246 ? A ALA 248 40 1 Y 1 A GLN 247 ? A GLN 249 41 1 Y 1 A LEU 266 ? A LEU 268 42 1 Y 1 A GLY 267 ? A GLY 269 43 1 Y 1 A GLY 268 ? A GLY 270 44 1 Y 1 A GLY 269 ? A GLY 271 45 1 Y 1 A GLU 270 ? A GLU 272 46 1 Y 1 A THR 271 ? A THR 273 47 1 Y 1 A VAL 272 ? A VAL 274 48 1 Y 1 A GLY 273 ? A GLY 275 49 1 Y 1 A THR 274 ? A THR 276 50 1 Y 1 A PHE 275 ? A PHE 277 51 1 Y 1 A VAL 276 ? A VAL 278 52 1 Y 1 A SER 277 ? A SER 279 53 1 Y 1 A PRO 278 ? A PRO 280 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 FE FE FE N N 88 GLN N N N N 89 GLN CA C N S 90 GLN C C N N 91 GLN O O N N 92 GLN CB C N N 93 GLN CG C N N 94 GLN CD C N N 95 GLN OE1 O N N 96 GLN NE2 N N N 97 GLN OXT O N N 98 GLN H H N N 99 GLN H2 H N N 100 GLN HA H N N 101 GLN HB2 H N N 102 GLN HB3 H N N 103 GLN HG2 H N N 104 GLN HG3 H N N 105 GLN HE21 H N N 106 GLN HE22 H N N 107 GLN HXT H N N 108 GLU N N N N 109 GLU CA C N S 110 GLU C C N N 111 GLU O O N N 112 GLU CB C N N 113 GLU CG C N N 114 GLU CD C N N 115 GLU OE1 O N N 116 GLU OE2 O N N 117 GLU OXT O N N 118 GLU H H N N 119 GLU H2 H N N 120 GLU HA H N N 121 GLU HB2 H N N 122 GLU HB3 H N N 123 GLU HG2 H N N 124 GLU HG3 H N N 125 GLU HE2 H N N 126 GLU HXT H N N 127 GLY N N N N 128 GLY CA C N N 129 GLY C C N N 130 GLY O O N N 131 GLY OXT O N N 132 GLY H H N N 133 GLY H2 H N N 134 GLY HA2 H N N 135 GLY HA3 H N N 136 GLY HXT H N N 137 HIS N N N N 138 HIS CA C N S 139 HIS C C N N 140 HIS O O N N 141 HIS CB C N N 142 HIS CG C Y N 143 HIS ND1 N Y N 144 HIS CD2 C Y N 145 HIS CE1 C Y N 146 HIS NE2 N Y N 147 HIS OXT O N N 148 HIS H H N N 149 HIS H2 H N N 150 HIS HA H N N 151 HIS HB2 H N N 152 HIS HB3 H N N 153 HIS HD1 H N N 154 HIS HD2 H N N 155 HIS HE1 H N N 156 HIS HE2 H N N 157 HIS HXT H N N 158 HOH O O N N 159 HOH H1 H N N 160 HOH H2 H N N 161 ILE N N N N 162 ILE CA C N S 163 ILE C C N N 164 ILE O O N N 165 ILE CB C N S 166 ILE CG1 C N N 167 ILE CG2 C N N 168 ILE CD1 C N N 169 ILE OXT O N N 170 ILE H H N N 171 ILE H2 H N N 172 ILE HA H N N 173 ILE HB H N N 174 ILE HG12 H N N 175 ILE HG13 H N N 176 ILE HG21 H N N 177 ILE HG22 H N N 178 ILE HG23 H N N 179 ILE HD11 H N N 180 ILE HD12 H N N 181 ILE HD13 H N N 182 ILE HXT H N N 183 LEU N N N N 184 LEU CA C N S 185 LEU C C N N 186 LEU O O N N 187 LEU CB C N N 188 LEU CG C N N 189 LEU CD1 C N N 190 LEU CD2 C N N 191 LEU OXT O N N 192 LEU H H N N 193 LEU H2 H N N 194 LEU HA H N N 195 LEU HB2 H N N 196 LEU HB3 H N N 197 LEU HG H N N 198 LEU HD11 H N N 199 LEU HD12 H N N 200 LEU HD13 H N N 201 LEU HD21 H N N 202 LEU HD22 H N N 203 LEU HD23 H N N 204 LEU HXT H N N 205 LYS N N N N 206 LYS CA C N S 207 LYS C C N N 208 LYS O O N N 209 LYS CB C N N 210 LYS CG C N N 211 LYS CD C N N 212 LYS CE C N N 213 LYS NZ N N N 214 LYS OXT O N N 215 LYS H H N N 216 LYS H2 H N N 217 LYS HA H N N 218 LYS HB2 H N N 219 LYS HB3 H N N 220 LYS HG2 H N N 221 LYS HG3 H N N 222 LYS HD2 H N N 223 LYS HD3 H N N 224 LYS HE2 H N N 225 LYS HE3 H N N 226 LYS HZ1 H N N 227 LYS HZ2 H N N 228 LYS HZ3 H N N 229 LYS HXT H N N 230 MET N N N N 231 MET CA C N S 232 MET C C N N 233 MET O O N N 234 MET CB C N N 235 MET CG C N N 236 MET SD S N N 237 MET CE C N N 238 MET OXT O N N 239 MET H H N N 240 MET H2 H N N 241 MET HA H N N 242 MET HB2 H N N 243 MET HB3 H N N 244 MET HG2 H N N 245 MET HG3 H N N 246 MET HE1 H N N 247 MET HE2 H N N 248 MET HE3 H N N 249 MET HXT H N N 250 MN MN MN N N 251 PHE N N N N 252 PHE CA C N S 253 PHE C C N N 254 PHE O O N N 255 PHE CB C N N 256 PHE CG C Y N 257 PHE CD1 C Y N 258 PHE CD2 C Y N 259 PHE CE1 C Y N 260 PHE CE2 C Y N 261 PHE CZ C Y N 262 PHE OXT O N N 263 PHE H H N N 264 PHE H2 H N N 265 PHE HA H N N 266 PHE HB2 H N N 267 PHE HB3 H N N 268 PHE HD1 H N N 269 PHE HD2 H N N 270 PHE HE1 H N N 271 PHE HE2 H N N 272 PHE HZ H N N 273 PHE HXT H N N 274 PRO N N N N 275 PRO CA C N S 276 PRO C C N N 277 PRO O O N N 278 PRO CB C N N 279 PRO CG C N N 280 PRO CD C N N 281 PRO OXT O N N 282 PRO H H N N 283 PRO HA H N N 284 PRO HB2 H N N 285 PRO HB3 H N N 286 PRO HG2 H N N 287 PRO HG3 H N N 288 PRO HD2 H N N 289 PRO HD3 H N N 290 PRO HXT H N N 291 SER N N N N 292 SER CA C N S 293 SER C C N N 294 SER O O N N 295 SER CB C N N 296 SER OG O N N 297 SER OXT O N N 298 SER H H N N 299 SER H2 H N N 300 SER HA H N N 301 SER HB2 H N N 302 SER HB3 H N N 303 SER HG H N N 304 SER HXT H N N 305 THR N N N N 306 THR CA C N S 307 THR C C N N 308 THR O O N N 309 THR CB C N R 310 THR OG1 O N N 311 THR CG2 C N N 312 THR OXT O N N 313 THR H H N N 314 THR H2 H N N 315 THR HA H N N 316 THR HB H N N 317 THR HG1 H N N 318 THR HG21 H N N 319 THR HG22 H N N 320 THR HG23 H N N 321 THR HXT H N N 322 TRP N N N N 323 TRP CA C N S 324 TRP C C N N 325 TRP O O N N 326 TRP CB C N N 327 TRP CG C Y N 328 TRP CD1 C Y N 329 TRP CD2 C Y N 330 TRP NE1 N Y N 331 TRP CE2 C Y N 332 TRP CE3 C Y N 333 TRP CZ2 C Y N 334 TRP CZ3 C Y N 335 TRP CH2 C Y N 336 TRP OXT O N N 337 TRP H H N N 338 TRP H2 H N N 339 TRP HA H N N 340 TRP HB2 H N N 341 TRP HB3 H N N 342 TRP HD1 H N N 343 TRP HE1 H N N 344 TRP HE3 H N N 345 TRP HZ2 H N N 346 TRP HZ3 H N N 347 TRP HH2 H N N 348 TRP HXT H N N 349 TYR N N N N 350 TYR CA C N S 351 TYR C C N N 352 TYR O O N N 353 TYR CB C N N 354 TYR CG C Y N 355 TYR CD1 C Y N 356 TYR CD2 C Y N 357 TYR CE1 C Y N 358 TYR CE2 C Y N 359 TYR CZ C Y N 360 TYR OH O N N 361 TYR OXT O N N 362 TYR H H N N 363 TYR H2 H N N 364 TYR HA H N N 365 TYR HB2 H N N 366 TYR HB3 H N N 367 TYR HD1 H N N 368 TYR HD2 H N N 369 TYR HE1 H N N 370 TYR HE2 H N N 371 TYR HH H N N 372 TYR HXT H N N 373 VAL N N N N 374 VAL CA C N S 375 VAL C C N N 376 VAL O O N N 377 VAL CB C N N 378 VAL CG1 C N N 379 VAL CG2 C N N 380 VAL OXT O N N 381 VAL H H N N 382 VAL H2 H N N 383 VAL HA H N N 384 VAL HB H N N 385 VAL HG11 H N N 386 VAL HG12 H N N 387 VAL HG13 H N N 388 VAL HG21 H N N 389 VAL HG22 H N N 390 VAL HG23 H N N 391 VAL HXT H N N 392 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _atom_sites.entry_id 2HYO _atom_sites.fract_transf_matrix[1][1] 0.018111 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010647 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019556 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C FE MN N O S # loop_