data_2IXR # _entry.id 2IXR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2IXR pdb_00002ixr 10.2210/pdb2ixr/pdb PDBE EBI-29353 ? ? WWPDB D_1290029353 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-11-02 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-05-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.status_code_sf' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2IXR _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2006-07-10 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2CMQ unspecified 'BIPD OF BURKHOLDERIA PSEUDOMALLEI' PDB 2IZP unspecified 'BIPD - AN INVASION PRTEIN ASSOCIATED WITH THE TYPE-III SECRETION SYSTEM OF BURKHOLDERIA PSEUDOMALLEI.' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Roversi, P.' 1 'Johnson, S.' 2 'Field, T.' 3 'Deane, J.E.' 4 'Galyov, E.E.' 5 'Lea, S.M.' 6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Self-Chaperoning of the Type III Secretion System Needle Tip Proteins Ipad and Bipd.' J.Biol.Chem. 282 4035 ? 2007 JBCHA3 US 0021-9258 0071 ? 17077085 10.1074/JBC.M607945200 1 ;Expression, Purification, Crystallization and Preliminary Crystallographic Analysis of Bipd, a Component of the Burkholderia Pseudomallei Type III Secretion System. ; 'Acta Crystallogr.,Sect.F' 62 861 ? 2006 ? DK 1744-3091 ? ? 16946464 10.1107/S1744309106027035 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Johnson, S.' 1 ? primary 'Roversi, P.' 2 ? primary 'Espina, M.' 3 ? primary 'Olive, A.' 4 ? primary 'Deane, J.E.' 5 ? primary 'Birket, S.' 6 ? primary 'Field, T.' 7 ? primary 'Picking, W.D.' 8 ? primary 'Blocker, A.J.' 9 ? primary 'Galyov, E.E.' 10 ? primary 'Picking, W.L.' 11 ? primary 'Lea, S.M.' 12 ? 1 'Roversi, P.' 13 ? 1 'Johnson, S.' 14 ? 1 'Field, T.' 15 ? 1 'Deane, J.E.' 16 ? 1 'Galyov, E.E.' 17 ? 1 'Lea, S.M.' 18 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'MEMBRANE ANTIGEN' 33087.219 1 ? ? 'RESIDUES 10-310' ? 2 water nat water 18.015 50 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name BIPD # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSALTVRDWPALEALAKTMPADAGARAMTDDDLRAAGVDRRVPEQKLGAAIDEFASLRLPDRIDGRFVDGRRANLTVFDD ARVAVRGHARAQRNLLERLETELLGGTLDTAGDEGGIQPDPILQGLVDVIGQGKSDIDAYATIVEGLTKYFQSVADVMSK LQDYISAKDDKNMKIDGGKIKALIQQVIDHLPTMQLPKGADIARWRKELGDAVSISDSGVVTINPDKLIKMRDSLPPDGT VWDTARYQAWNTAFSGQKDNIQNDVQTLVEKYSHQNSNFDNLVKVLSGAISTLTDTAKSYLQI ; _entity_poly.pdbx_seq_one_letter_code_can ;GSALTVRDWPALEALAKTMPADAGARAMTDDDLRAAGVDRRVPEQKLGAAIDEFASLRLPDRIDGRFVDGRRANLTVFDD ARVAVRGHARAQRNLLERLETELLGGTLDTAGDEGGIQPDPILQGLVDVIGQGKSDIDAYATIVEGLTKYFQSVADVMSK LQDYISAKDDKNMKIDGGKIKALIQQVIDHLPTMQLPKGADIARWRKELGDAVSISDSGVVTINPDKLIKMRDSLPPDGT VWDTARYQAWNTAFSGQKDNIQNDVQTLVEKYSHQNSNFDNLVKVLSGAISTLTDTAKSYLQI ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 ALA n 1 4 LEU n 1 5 THR n 1 6 VAL n 1 7 ARG n 1 8 ASP n 1 9 TRP n 1 10 PRO n 1 11 ALA n 1 12 LEU n 1 13 GLU n 1 14 ALA n 1 15 LEU n 1 16 ALA n 1 17 LYS n 1 18 THR n 1 19 MET n 1 20 PRO n 1 21 ALA n 1 22 ASP n 1 23 ALA n 1 24 GLY n 1 25 ALA n 1 26 ARG n 1 27 ALA n 1 28 MET n 1 29 THR n 1 30 ASP n 1 31 ASP n 1 32 ASP n 1 33 LEU n 1 34 ARG n 1 35 ALA n 1 36 ALA n 1 37 GLY n 1 38 VAL n 1 39 ASP n 1 40 ARG n 1 41 ARG n 1 42 VAL n 1 43 PRO n 1 44 GLU n 1 45 GLN n 1 46 LYS n 1 47 LEU n 1 48 GLY n 1 49 ALA n 1 50 ALA n 1 51 ILE n 1 52 ASP n 1 53 GLU n 1 54 PHE n 1 55 ALA n 1 56 SER n 1 57 LEU n 1 58 ARG n 1 59 LEU n 1 60 PRO n 1 61 ASP n 1 62 ARG n 1 63 ILE n 1 64 ASP n 1 65 GLY n 1 66 ARG n 1 67 PHE n 1 68 VAL n 1 69 ASP n 1 70 GLY n 1 71 ARG n 1 72 ARG n 1 73 ALA n 1 74 ASN n 1 75 LEU n 1 76 THR n 1 77 VAL n 1 78 PHE n 1 79 ASP n 1 80 ASP n 1 81 ALA n 1 82 ARG n 1 83 VAL n 1 84 ALA n 1 85 VAL n 1 86 ARG n 1 87 GLY n 1 88 HIS n 1 89 ALA n 1 90 ARG n 1 91 ALA n 1 92 GLN n 1 93 ARG n 1 94 ASN n 1 95 LEU n 1 96 LEU n 1 97 GLU n 1 98 ARG n 1 99 LEU n 1 100 GLU n 1 101 THR n 1 102 GLU n 1 103 LEU n 1 104 LEU n 1 105 GLY n 1 106 GLY n 1 107 THR n 1 108 LEU n 1 109 ASP n 1 110 THR n 1 111 ALA n 1 112 GLY n 1 113 ASP n 1 114 GLU n 1 115 GLY n 1 116 GLY n 1 117 ILE n 1 118 GLN n 1 119 PRO n 1 120 ASP n 1 121 PRO n 1 122 ILE n 1 123 LEU n 1 124 GLN n 1 125 GLY n 1 126 LEU n 1 127 VAL n 1 128 ASP n 1 129 VAL n 1 130 ILE n 1 131 GLY n 1 132 GLN n 1 133 GLY n 1 134 LYS n 1 135 SER n 1 136 ASP n 1 137 ILE n 1 138 ASP n 1 139 ALA n 1 140 TYR n 1 141 ALA n 1 142 THR n 1 143 ILE n 1 144 VAL n 1 145 GLU n 1 146 GLY n 1 147 LEU n 1 148 THR n 1 149 LYS n 1 150 TYR n 1 151 PHE n 1 152 GLN n 1 153 SER n 1 154 VAL n 1 155 ALA n 1 156 ASP n 1 157 VAL n 1 158 MET n 1 159 SER n 1 160 LYS n 1 161 LEU n 1 162 GLN n 1 163 ASP n 1 164 TYR n 1 165 ILE n 1 166 SER n 1 167 ALA n 1 168 LYS n 1 169 ASP n 1 170 ASP n 1 171 LYS n 1 172 ASN n 1 173 MET n 1 174 LYS n 1 175 ILE n 1 176 ASP n 1 177 GLY n 1 178 GLY n 1 179 LYS n 1 180 ILE n 1 181 LYS n 1 182 ALA n 1 183 LEU n 1 184 ILE n 1 185 GLN n 1 186 GLN n 1 187 VAL n 1 188 ILE n 1 189 ASP n 1 190 HIS n 1 191 LEU n 1 192 PRO n 1 193 THR n 1 194 MET n 1 195 GLN n 1 196 LEU n 1 197 PRO n 1 198 LYS n 1 199 GLY n 1 200 ALA n 1 201 ASP n 1 202 ILE n 1 203 ALA n 1 204 ARG n 1 205 TRP n 1 206 ARG n 1 207 LYS n 1 208 GLU n 1 209 LEU n 1 210 GLY n 1 211 ASP n 1 212 ALA n 1 213 VAL n 1 214 SER n 1 215 ILE n 1 216 SER n 1 217 ASP n 1 218 SER n 1 219 GLY n 1 220 VAL n 1 221 VAL n 1 222 THR n 1 223 ILE n 1 224 ASN n 1 225 PRO n 1 226 ASP n 1 227 LYS n 1 228 LEU n 1 229 ILE n 1 230 LYS n 1 231 MET n 1 232 ARG n 1 233 ASP n 1 234 SER n 1 235 LEU n 1 236 PRO n 1 237 PRO n 1 238 ASP n 1 239 GLY n 1 240 THR n 1 241 VAL n 1 242 TRP n 1 243 ASP n 1 244 THR n 1 245 ALA n 1 246 ARG n 1 247 TYR n 1 248 GLN n 1 249 ALA n 1 250 TRP n 1 251 ASN n 1 252 THR n 1 253 ALA n 1 254 PHE n 1 255 SER n 1 256 GLY n 1 257 GLN n 1 258 LYS n 1 259 ASP n 1 260 ASN n 1 261 ILE n 1 262 GLN n 1 263 ASN n 1 264 ASP n 1 265 VAL n 1 266 GLN n 1 267 THR n 1 268 LEU n 1 269 VAL n 1 270 GLU n 1 271 LYS n 1 272 TYR n 1 273 SER n 1 274 HIS n 1 275 GLN n 1 276 ASN n 1 277 SER n 1 278 ASN n 1 279 PHE n 1 280 ASP n 1 281 ASN n 1 282 LEU n 1 283 VAL n 1 284 LYS n 1 285 VAL n 1 286 LEU n 1 287 SER n 1 288 GLY n 1 289 ALA n 1 290 ILE n 1 291 SER n 1 292 THR n 1 293 LEU n 1 294 THR n 1 295 ASP n 1 296 THR n 1 297 ALA n 1 298 LYS n 1 299 SER n 1 300 TYR n 1 301 LEU n 1 302 GLN n 1 303 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 10276 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'BURKHOLDERIA PSEUDOMALLEI' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 28450 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector PGEX-4T-1 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PGEXBIPD _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'PUBLIC HEALTH LABORATORY SERVICE, COLINDALE, LONDON, UK' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 8 ? ? ? A . n A 1 2 SER 2 9 ? ? ? A . n A 1 3 ALA 3 10 ? ? ? A . n A 1 4 LEU 4 11 ? ? ? A . n A 1 5 THR 5 12 ? ? ? A . n A 1 6 VAL 6 13 ? ? ? A . n A 1 7 ARG 7 14 ? ? ? A . n A 1 8 ASP 8 15 ? ? ? A . n A 1 9 TRP 9 16 ? ? ? A . n A 1 10 PRO 10 17 ? ? ? A . n A 1 11 ALA 11 18 ? ? ? A . n A 1 12 LEU 12 19 ? ? ? A . n A 1 13 GLU 13 20 ? ? ? A . n A 1 14 ALA 14 21 ? ? ? A . n A 1 15 LEU 15 22 ? ? ? A . n A 1 16 ALA 16 23 ? ? ? A . n A 1 17 LYS 17 24 ? ? ? A . n A 1 18 THR 18 25 ? ? ? A . n A 1 19 MET 19 26 ? ? ? A . n A 1 20 PRO 20 27 ? ? ? A . n A 1 21 ALA 21 28 ? ? ? A . n A 1 22 ASP 22 29 ? ? ? A . n A 1 23 ALA 23 30 ? ? ? A . n A 1 24 GLY 24 31 ? ? ? A . n A 1 25 ALA 25 32 ? ? ? A . n A 1 26 ARG 26 33 ? ? ? A . n A 1 27 ALA 27 34 34 ALA ALA A . n A 1 28 MET 28 35 35 MET MET A . n A 1 29 THR 29 36 36 THR THR A . n A 1 30 ASP 30 37 37 ASP ASP A . n A 1 31 ASP 31 38 38 ASP ASP A . n A 1 32 ASP 32 39 39 ASP ASP A . n A 1 33 LEU 33 40 40 LEU LEU A . n A 1 34 ARG 34 41 41 ARG ARG A . n A 1 35 ALA 35 42 42 ALA ALA A . n A 1 36 ALA 36 43 43 ALA ALA A . n A 1 37 GLY 37 44 44 GLY GLY A . n A 1 38 VAL 38 45 45 VAL VAL A . n A 1 39 ASP 39 46 46 ASP ASP A . n A 1 40 ARG 40 47 47 ARG ARG A . n A 1 41 ARG 41 48 48 ARG ARG A . n A 1 42 VAL 42 49 49 VAL VAL A . n A 1 43 PRO 43 50 50 PRO PRO A . n A 1 44 GLU 44 51 51 GLU GLU A . n A 1 45 GLN 45 52 52 GLN GLN A . n A 1 46 LYS 46 53 53 LYS LYS A . n A 1 47 LEU 47 54 54 LEU LEU A . n A 1 48 GLY 48 55 55 GLY GLY A . n A 1 49 ALA 49 56 56 ALA ALA A . n A 1 50 ALA 50 57 57 ALA ALA A . n A 1 51 ILE 51 58 58 ILE ILE A . n A 1 52 ASP 52 59 59 ASP ASP A . n A 1 53 GLU 53 60 60 GLU GLU A . n A 1 54 PHE 54 61 61 PHE PHE A . n A 1 55 ALA 55 62 62 ALA ALA A . n A 1 56 SER 56 63 63 SER SER A . n A 1 57 LEU 57 64 64 LEU LEU A . n A 1 58 ARG 58 65 65 ARG ARG A . n A 1 59 LEU 59 66 66 LEU LEU A . n A 1 60 PRO 60 67 67 PRO PRO A . n A 1 61 ASP 61 68 68 ASP ASP A . n A 1 62 ARG 62 69 69 ARG ARG A . n A 1 63 ILE 63 70 70 ILE ILE A . n A 1 64 ASP 64 71 71 ASP ASP A . n A 1 65 GLY 65 72 72 GLY GLY A . n A 1 66 ARG 66 73 73 ARG ARG A . n A 1 67 PHE 67 74 74 PHE PHE A . n A 1 68 VAL 68 75 75 VAL VAL A . n A 1 69 ASP 69 76 76 ASP ASP A . n A 1 70 GLY 70 77 77 GLY GLY A . n A 1 71 ARG 71 78 78 ARG ARG A . n A 1 72 ARG 72 79 79 ARG ARG A . n A 1 73 ALA 73 80 80 ALA ALA A . n A 1 74 ASN 74 81 81 ASN ASN A . n A 1 75 LEU 75 82 82 LEU LEU A . n A 1 76 THR 76 83 83 THR THR A . n A 1 77 VAL 77 84 84 VAL VAL A . n A 1 78 PHE 78 85 85 PHE PHE A . n A 1 79 ASP 79 86 86 ASP ASP A . n A 1 80 ASP 80 87 87 ASP ASP A . n A 1 81 ALA 81 88 88 ALA ALA A . n A 1 82 ARG 82 89 89 ARG ARG A . n A 1 83 VAL 83 90 90 VAL VAL A . n A 1 84 ALA 84 91 91 ALA ALA A . n A 1 85 VAL 85 92 92 VAL VAL A . n A 1 86 ARG 86 93 93 ARG ARG A . n A 1 87 GLY 87 94 94 GLY GLY A . n A 1 88 HIS 88 95 95 HIS HIS A . n A 1 89 ALA 89 96 96 ALA ALA A . n A 1 90 ARG 90 97 97 ARG ARG A . n A 1 91 ALA 91 98 98 ALA ALA A . n A 1 92 GLN 92 99 99 GLN GLN A . n A 1 93 ARG 93 100 100 ARG ARG A . n A 1 94 ASN 94 101 101 ASN ASN A . n A 1 95 LEU 95 102 102 LEU LEU A . n A 1 96 LEU 96 103 103 LEU LEU A . n A 1 97 GLU 97 104 104 GLU GLU A . n A 1 98 ARG 98 105 105 ARG ARG A . n A 1 99 LEU 99 106 106 LEU LEU A . n A 1 100 GLU 100 107 107 GLU GLU A . n A 1 101 THR 101 108 108 THR THR A . n A 1 102 GLU 102 109 109 GLU GLU A . n A 1 103 LEU 103 110 110 LEU LEU A . n A 1 104 LEU 104 111 111 LEU LEU A . n A 1 105 GLY 105 112 ? ? ? A . n A 1 106 GLY 106 113 ? ? ? A . n A 1 107 THR 107 114 ? ? ? A . n A 1 108 LEU 108 115 ? ? ? A . n A 1 109 ASP 109 116 ? ? ? A . n A 1 110 THR 110 117 ? ? ? A . n A 1 111 ALA 111 118 ? ? ? A . n A 1 112 GLY 112 119 ? ? ? A . n A 1 113 ASP 113 120 ? ? ? A . n A 1 114 GLU 114 121 ? ? ? A . n A 1 115 GLY 115 122 ? ? ? A . n A 1 116 GLY 116 123 ? ? ? A . n A 1 117 ILE 117 124 ? ? ? A . n A 1 118 GLN 118 125 125 GLN GLN A . n A 1 119 PRO 119 126 126 PRO PRO A . n A 1 120 ASP 120 127 127 ASP ASP A . n A 1 121 PRO 121 128 128 PRO PRO A . n A 1 122 ILE 122 129 129 ILE ILE A . n A 1 123 LEU 123 130 130 LEU LEU A . n A 1 124 GLN 124 131 131 GLN GLN A . n A 1 125 GLY 125 132 132 GLY GLY A . n A 1 126 LEU 126 133 133 LEU LEU A . n A 1 127 VAL 127 134 134 VAL VAL A . n A 1 128 ASP 128 135 135 ASP ASP A . n A 1 129 VAL 129 136 136 VAL VAL A . n A 1 130 ILE 130 137 137 ILE ILE A . n A 1 131 GLY 131 138 138 GLY GLY A . n A 1 132 GLN 132 139 139 GLN GLN A . n A 1 133 GLY 133 140 140 GLY GLY A . n A 1 134 LYS 134 141 141 LYS LYS A . n A 1 135 SER 135 142 142 SER SER A . n A 1 136 ASP 136 143 143 ASP ASP A . n A 1 137 ILE 137 144 144 ILE ILE A . n A 1 138 ASP 138 145 145 ASP ASP A . n A 1 139 ALA 139 146 146 ALA ALA A . n A 1 140 TYR 140 147 147 TYR TYR A . n A 1 141 ALA 141 148 148 ALA ALA A . n A 1 142 THR 142 149 149 THR THR A . n A 1 143 ILE 143 150 150 ILE ILE A . n A 1 144 VAL 144 151 151 VAL VAL A . n A 1 145 GLU 145 152 152 GLU GLU A . n A 1 146 GLY 146 153 153 GLY GLY A . n A 1 147 LEU 147 154 154 LEU LEU A . n A 1 148 THR 148 155 155 THR THR A . n A 1 149 LYS 149 156 156 LYS LYS A . n A 1 150 TYR 150 157 157 TYR TYR A . n A 1 151 PHE 151 158 158 PHE PHE A . n A 1 152 GLN 152 159 159 GLN GLN A . n A 1 153 SER 153 160 160 SER SER A . n A 1 154 VAL 154 161 161 VAL VAL A . n A 1 155 ALA 155 162 162 ALA ALA A . n A 1 156 ASP 156 163 163 ASP ASP A . n A 1 157 VAL 157 164 164 VAL VAL A . n A 1 158 MET 158 165 165 MET MET A . n A 1 159 SER 159 166 166 SER SER A . n A 1 160 LYS 160 167 167 LYS LYS A . n A 1 161 LEU 161 168 168 LEU LEU A . n A 1 162 GLN 162 169 169 GLN GLN A . n A 1 163 ASP 163 170 170 ASP ASP A . n A 1 164 TYR 164 171 171 TYR TYR A . n A 1 165 ILE 165 172 172 ILE ILE A . n A 1 166 SER 166 173 173 SER SER A . n A 1 167 ALA 167 174 174 ALA ALA A . n A 1 168 LYS 168 175 175 LYS LYS A . n A 1 169 ASP 169 176 176 ASP ASP A . n A 1 170 ASP 170 177 177 ASP ASP A . n A 1 171 LYS 171 178 178 LYS LYS A . n A 1 172 ASN 172 179 179 ASN ASN A . n A 1 173 MET 173 180 180 MET MET A . n A 1 174 LYS 174 181 181 LYS LYS A . n A 1 175 ILE 175 182 182 ILE ILE A . n A 1 176 ASP 176 183 183 ASP ASP A . n A 1 177 GLY 177 184 184 GLY GLY A . n A 1 178 GLY 178 185 185 GLY GLY A . n A 1 179 LYS 179 186 186 LYS LYS A . n A 1 180 ILE 180 187 187 ILE ILE A . n A 1 181 LYS 181 188 188 LYS LYS A . n A 1 182 ALA 182 189 189 ALA ALA A . n A 1 183 LEU 183 190 190 LEU LEU A . n A 1 184 ILE 184 191 191 ILE ILE A . n A 1 185 GLN 185 192 192 GLN GLN A . n A 1 186 GLN 186 193 193 GLN GLN A . n A 1 187 VAL 187 194 194 VAL VAL A . n A 1 188 ILE 188 195 195 ILE ILE A . n A 1 189 ASP 189 196 196 ASP ASP A . n A 1 190 HIS 190 197 197 HIS HIS A . n A 1 191 LEU 191 198 198 LEU LEU A . n A 1 192 PRO 192 199 199 PRO PRO A . n A 1 193 THR 193 200 200 THR THR A . n A 1 194 MET 194 201 201 MET MET A . n A 1 195 GLN 195 202 202 GLN GLN A . n A 1 196 LEU 196 203 203 LEU LEU A . n A 1 197 PRO 197 204 204 PRO PRO A . n A 1 198 LYS 198 205 205 LYS LYS A . n A 1 199 GLY 199 206 206 GLY GLY A . n A 1 200 ALA 200 207 207 ALA ALA A . n A 1 201 ASP 201 208 208 ASP ASP A . n A 1 202 ILE 202 209 209 ILE ILE A . n A 1 203 ALA 203 210 210 ALA ALA A . n A 1 204 ARG 204 211 211 ARG ARG A . n A 1 205 TRP 205 212 212 TRP TRP A . n A 1 206 ARG 206 213 213 ARG ARG A . n A 1 207 LYS 207 214 214 LYS LYS A . n A 1 208 GLU 208 215 215 GLU GLU A . n A 1 209 LEU 209 216 216 LEU LEU A . n A 1 210 GLY 210 217 217 GLY GLY A . n A 1 211 ASP 211 218 218 ASP ASP A . n A 1 212 ALA 212 219 219 ALA ALA A . n A 1 213 VAL 213 220 220 VAL VAL A . n A 1 214 SER 214 221 221 SER SER A . n A 1 215 ILE 215 222 222 ILE ILE A . n A 1 216 SER 216 223 223 SER SER A . n A 1 217 ASP 217 224 224 ASP ASP A . n A 1 218 SER 218 225 225 SER SER A . n A 1 219 GLY 219 226 226 GLY GLY A . n A 1 220 VAL 220 227 227 VAL VAL A . n A 1 221 VAL 221 228 228 VAL VAL A . n A 1 222 THR 222 229 229 THR THR A . n A 1 223 ILE 223 230 230 ILE ILE A . n A 1 224 ASN 224 231 231 ASN ASN A . n A 1 225 PRO 225 232 232 PRO PRO A . n A 1 226 ASP 226 233 233 ASP ASP A . n A 1 227 LYS 227 234 234 LYS LYS A . n A 1 228 LEU 228 235 235 LEU LEU A . n A 1 229 ILE 229 236 236 ILE ILE A . n A 1 230 LYS 230 237 237 LYS LYS A . n A 1 231 MET 231 238 238 MET MET A . n A 1 232 ARG 232 239 239 ARG ARG A . n A 1 233 ASP 233 240 240 ASP ASP A . n A 1 234 SER 234 241 241 SER SER A . n A 1 235 LEU 235 242 242 LEU LEU A . n A 1 236 PRO 236 243 243 PRO PRO A . n A 1 237 PRO 237 244 244 PRO PRO A . n A 1 238 ASP 238 245 245 ASP ASP A . n A 1 239 GLY 239 246 246 GLY GLY A . n A 1 240 THR 240 247 247 THR THR A . n A 1 241 VAL 241 248 248 VAL VAL A . n A 1 242 TRP 242 249 249 TRP TRP A . n A 1 243 ASP 243 250 250 ASP ASP A . n A 1 244 THR 244 251 251 THR THR A . n A 1 245 ALA 245 252 252 ALA ALA A . n A 1 246 ARG 246 253 253 ARG ARG A . n A 1 247 TYR 247 254 254 TYR TYR A . n A 1 248 GLN 248 255 255 GLN GLN A . n A 1 249 ALA 249 256 256 ALA ALA A . n A 1 250 TRP 250 257 257 TRP TRP A . n A 1 251 ASN 251 258 258 ASN ASN A . n A 1 252 THR 252 259 259 THR THR A . n A 1 253 ALA 253 260 260 ALA ALA A . n A 1 254 PHE 254 261 261 PHE PHE A . n A 1 255 SER 255 262 262 SER SER A . n A 1 256 GLY 256 263 263 GLY GLY A . n A 1 257 GLN 257 264 264 GLN GLN A . n A 1 258 LYS 258 265 265 LYS LYS A . n A 1 259 ASP 259 266 266 ASP ASP A . n A 1 260 ASN 260 267 267 ASN ASN A . n A 1 261 ILE 261 268 268 ILE ILE A . n A 1 262 GLN 262 269 269 GLN GLN A . n A 1 263 ASN 263 270 270 ASN ASN A . n A 1 264 ASP 264 271 271 ASP ASP A . n A 1 265 VAL 265 272 272 VAL VAL A . n A 1 266 GLN 266 273 273 GLN GLN A . n A 1 267 THR 267 274 274 THR THR A . n A 1 268 LEU 268 275 275 LEU LEU A . n A 1 269 VAL 269 276 276 VAL VAL A . n A 1 270 GLU 270 277 277 GLU GLU A . n A 1 271 LYS 271 278 278 LYS LYS A . n A 1 272 TYR 272 279 279 TYR TYR A . n A 1 273 SER 273 280 280 SER SER A . n A 1 274 HIS 274 281 281 HIS HIS A . n A 1 275 GLN 275 282 282 GLN GLN A . n A 1 276 ASN 276 283 283 ASN ASN A . n A 1 277 SER 277 284 284 SER SER A . n A 1 278 ASN 278 285 285 ASN ASN A . n A 1 279 PHE 279 286 286 PHE PHE A . n A 1 280 ASP 280 287 287 ASP ASP A . n A 1 281 ASN 281 288 288 ASN ASN A . n A 1 282 LEU 282 289 289 LEU LEU A . n A 1 283 VAL 283 290 290 VAL VAL A . n A 1 284 LYS 284 291 291 LYS LYS A . n A 1 285 VAL 285 292 292 VAL VAL A . n A 1 286 LEU 286 293 293 LEU LEU A . n A 1 287 SER 287 294 294 SER SER A . n A 1 288 GLY 288 295 295 GLY GLY A . n A 1 289 ALA 289 296 296 ALA ALA A . n A 1 290 ILE 290 297 297 ILE ILE A . n A 1 291 SER 291 298 298 SER SER A . n A 1 292 THR 292 299 299 THR THR A . n A 1 293 LEU 293 300 300 LEU LEU A . n A 1 294 THR 294 301 301 THR THR A . n A 1 295 ASP 295 302 302 ASP ASP A . n A 1 296 THR 296 303 ? ? ? A . n A 1 297 ALA 297 304 ? ? ? A . n A 1 298 LYS 298 305 ? ? ? A . n A 1 299 SER 299 306 ? ? ? A . n A 1 300 TYR 300 307 ? ? ? A . n A 1 301 LEU 301 308 ? ? ? A . n A 1 302 GLN 302 309 ? ? ? A . n A 1 303 ILE 303 310 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 2001 2001 HOH HOH A . B 2 HOH 2 2002 2002 HOH HOH A . B 2 HOH 3 2003 2003 HOH HOH A . B 2 HOH 4 2004 2004 HOH HOH A . B 2 HOH 5 2005 2005 HOH HOH A . B 2 HOH 6 2006 2006 HOH HOH A . B 2 HOH 7 2007 2007 HOH HOH A . B 2 HOH 8 2008 2008 HOH HOH A . B 2 HOH 9 2009 2009 HOH HOH A . B 2 HOH 10 2010 2010 HOH HOH A . B 2 HOH 11 2011 2011 HOH HOH A . B 2 HOH 12 2012 2012 HOH HOH A . B 2 HOH 13 2013 2013 HOH HOH A . B 2 HOH 14 2014 2014 HOH HOH A . B 2 HOH 15 2015 2015 HOH HOH A . B 2 HOH 16 2016 2016 HOH HOH A . B 2 HOH 17 2017 2017 HOH HOH A . B 2 HOH 18 2018 2018 HOH HOH A . B 2 HOH 19 2019 2019 HOH HOH A . B 2 HOH 20 2020 2020 HOH HOH A . B 2 HOH 21 2021 2021 HOH HOH A . B 2 HOH 22 2022 2022 HOH HOH A . B 2 HOH 23 2023 2023 HOH HOH A . B 2 HOH 24 2024 2024 HOH HOH A . B 2 HOH 25 2025 2025 HOH HOH A . B 2 HOH 26 2026 2026 HOH HOH A . B 2 HOH 27 2027 2027 HOH HOH A . B 2 HOH 28 2028 2028 HOH HOH A . B 2 HOH 29 2029 2029 HOH HOH A . B 2 HOH 30 2030 2030 HOH HOH A . B 2 HOH 31 2031 2031 HOH HOH A . B 2 HOH 32 2032 2032 HOH HOH A . B 2 HOH 33 2033 2033 HOH HOH A . B 2 HOH 34 2034 2034 HOH HOH A . B 2 HOH 35 2035 2035 HOH HOH A . B 2 HOH 36 2036 2036 HOH HOH A . B 2 HOH 37 2037 2037 HOH HOH A . B 2 HOH 38 2038 2038 HOH HOH A . B 2 HOH 39 2039 2039 HOH HOH A . B 2 HOH 40 2040 2040 HOH HOH A . B 2 HOH 41 2041 2041 HOH HOH A . B 2 HOH 42 2042 2042 HOH HOH A . B 2 HOH 43 2043 2043 HOH HOH A . B 2 HOH 44 2044 2044 HOH HOH A . B 2 HOH 45 2045 2045 HOH HOH A . B 2 HOH 46 2046 2046 HOH HOH A . B 2 HOH 47 2047 2047 HOH HOH A . B 2 HOH 48 2048 2048 HOH HOH A . B 2 HOH 49 2049 2049 HOH HOH A . B 2 HOH 50 2050 2050 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DM 'model building' . ? 1 SCALA 'data scaling' . ? 2 SHELXD phasing . ? 3 SHARP phasing . ? 4 SOLOMON phasing . ? 5 DM phasing . ? 6 TNT refinement 5.6.1 ? 7 # _cell.entry_id 2IXR _cell.length_a 103.980 _cell.length_b 122.790 _cell.length_c 49.170 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2IXR _symmetry.space_group_name_H-M 'C 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 21 # _exptl.entry_id 2IXR _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.3 _exptl_crystal.density_percent_sol 47 _exptl_crystal.description ;TWO PT ATOMS WERE FOUND IN K2PTCL4 ANOMALOUS DIFFERENCE PATTERSON MAPS USING SHELXD. THESE PT SITES ALLOWED LOCATION OF THE SE ATOMS IN A SEMET DERIVATIVE ANOMALOUS FOURIER DIFFERENCE MAP USING SHARP. ; # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.50 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '1 M TRISODIUM CITRATE, 10 MM SODIUM BORATE PH 8.5' # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2005-09-23 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9778 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID29' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID29 _diffrn_source.pdbx_wavelength 0.9778 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2IXR _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 38.100 _reflns.d_resolution_high 2.600 _reflns.number_obs 10013 _reflns.number_all ? _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.11000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 18.7000 _reflns.B_iso_Wilson_estimate 3.100 _reflns.pdbx_redundancy 10.900 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.60 _reflns_shell.d_res_low 2.74 _reflns_shell.percent_possible_all 98.6 _reflns_shell.Rmerge_I_obs 0.40000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 5.400 _reflns_shell.pdbx_redundancy 9.30 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2IXR _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 10013 _refine.ls_number_reflns_all 10013 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40.0 _refine.ls_d_res_high 2.6 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.20 _refine.ls_R_factor_all 0.205 _refine.ls_R_factor_R_work 0.20 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'BABINET SCALING' _refine.solvent_model_param_ksol 0.39 _refine.solvent_model_param_bsol 51 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'TNT WAS DRIVEN BY MAXIMUM LIKELIHOOD USING BUSTER BETA 1.0.3' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MIRAS _refine.pdbx_isotropic_thermal_model 'TNT BCORREL' _refine.pdbx_stereochemistry_target_values 'TNT PROTGEO' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1993 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 50 _refine_hist.number_atoms_total 2043 _refine_hist.d_res_high 2.6 _refine_hist.d_res_low 40.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function t_bond_d 0.005 ? 2 2051 'X-RAY DIFFRACTION' ? t_angle_deg 0.416 ? 5 2765 'X-RAY DIFFRACTION' ? t_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? t_incorr_chiral_ct ? ? ? 0 'X-RAY DIFFRACTION' ? t_pseud_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_trig_c_planes 0.006 ? 2 66 'X-RAY DIFFRACTION' ? t_gen_planes 0.011 ? 5 291 'X-RAY DIFFRACTION' ? t_it 0.982 ? 20 2051 'X-RAY DIFFRACTION' ? t_nbd 0.034 ? 5 37 'X-RAY DIFFRACTION' ? t_omega_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_other_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_improper_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_chiral_improper_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_sum_occupancies ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_distance ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_ideal_dist_contact ? ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.entry_id 2IXR _pdbx_refine.R_factor_all_no_cutoff 0.205 _pdbx_refine.R_factor_obs_no_cutoff 0.20 _pdbx_refine.free_R_factor_no_cutoff 0.245 _pdbx_refine.free_R_error_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 5 _pdbx_refine.free_R_val_test_set_ct_no_cutoff 480 _pdbx_refine.R_factor_all_4sig_cutoff ? _pdbx_refine.R_factor_obs_4sig_cutoff ? _pdbx_refine.free_R_factor_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff ? _pdbx_refine.number_reflns_obs_4sig_cutoff ? # _database_PDB_matrix.entry_id 2IXR _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2IXR _struct.title 'BipD of Burkholderia Pseudomallei' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2IXR _struct_keywords.pdbx_keywords TOXIN _struct_keywords.text 'BURKHOLDERIA PSEUDOMALLEI, TOXIN, BIPD, TTSS, T3SS, TYPE 3 SECRETION SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 2IXR 1 ? ? 2IXR ? 2 UNP Q63K37_BURPS 1 ? ? Q63K37 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2IXR A 1 ? 2 ? 2IXR 8 ? 9 ? 8 9 2 2 2IXR A 3 ? 303 ? Q63K37 10 ? 310 ? 10 310 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 29 ? ALA A 36 ? THR A 36 ALA A 43 1 ? 8 HELX_P HELX_P2 2 ARG A 40 ? ALA A 55 ? ARG A 47 ALA A 62 1 ? 16 HELX_P HELX_P3 3 LEU A 75 ? LEU A 103 ? LEU A 82 LEU A 110 1 ? 29 HELX_P HELX_P4 4 ASP A 120 ? LEU A 161 ? ASP A 127 LEU A 168 1 ? 42 HELX_P HELX_P5 5 ASP A 176 ? HIS A 190 ? ASP A 183 HIS A 197 1 ? 15 HELX_P HELX_P6 6 ASP A 201 ? GLY A 210 ? ASP A 208 GLY A 217 1 ? 10 HELX_P HELX_P7 7 PRO A 225 ? ASP A 233 ? PRO A 232 ASP A 240 1 ? 9 HELX_P HELX_P8 8 THR A 244 ? THR A 294 ? THR A 251 THR A 301 1 ? 51 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLN 118 A . ? GLN 125 A PRO 119 A ? PRO 126 A 1 -4.60 2 THR 294 A . ? THR 301 A ASP 295 A ? ASP 302 A 1 0.36 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 2 ? AB ? 3 ? AC ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AC 1 2 ? anti-parallel AC 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 ASP A 61 ? ARG A 62 ? ASP A 68 ARG A 69 AA 2 PHE A 67 ? VAL A 68 ? PHE A 74 VAL A 75 AB 1 ILE A 165 ? ALA A 167 ? ILE A 172 ALA A 174 AB 2 ASN A 172 ? ILE A 175 ? ASN A 179 ILE A 182 AB 3 THR A 240 ? ASP A 243 ? THR A 247 ASP A 250 AC 1 MET A 194 ? GLN A 195 ? MET A 201 GLN A 202 AC 2 VAL A 220 ? ILE A 223 ? VAL A 227 ILE A 230 AC 3 VAL A 213 ? ILE A 215 ? VAL A 220 ILE A 222 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N ASP A 61 ? N ASP A 68 O VAL A 68 ? O VAL A 75 AB 1 2 N SER A 166 ? N SER A 173 O LYS A 174 ? O LYS A 181 AB 2 3 N ILE A 175 ? N ILE A 182 O THR A 240 ? O THR A 247 AC 1 2 N MET A 194 ? N MET A 201 O VAL A 221 ? O VAL A 228 AC 2 3 N THR A 222 ? N THR A 229 O SER A 214 ? O SER A 221 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 C _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 GLN _pdbx_validate_close_contact.auth_seq_id_1 125 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 CD _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 PRO _pdbx_validate_close_contact.auth_seq_id_2 126 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.69 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C A GLN 125 ? ? N A PRO 126 ? ? CD A PRO 126 ? ? 73.74 120.60 -46.86 2.20 Y 2 1 C A LEU 242 ? ? N A PRO 243 ? ? CD A PRO 243 ? ? 102.62 128.40 -25.78 2.10 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MET A 35 ? ? -54.83 109.41 2 1 ASP A 71 ? ? 70.90 52.42 3 1 PRO A 126 ? ? -161.53 -22.66 4 1 ASP A 127 ? ? 71.96 81.18 5 1 LYS A 175 ? ? -99.10 -64.87 6 1 ASP A 176 ? ? -110.75 -90.16 7 1 ASP A 177 ? ? -161.26 -8.73 8 1 ASP A 208 ? ? -67.66 96.95 # _pdbx_entry_details.entry_id 2IXR _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE GS INITIAL RESIDUES COME FROM THE TAG, THE SEQUENCE STARTS AT BIPD RESIDUE 10 ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 8 ? A GLY 1 2 1 Y 1 A SER 9 ? A SER 2 3 1 Y 1 A ALA 10 ? A ALA 3 4 1 Y 1 A LEU 11 ? A LEU 4 5 1 Y 1 A THR 12 ? A THR 5 6 1 Y 1 A VAL 13 ? A VAL 6 7 1 Y 1 A ARG 14 ? A ARG 7 8 1 Y 1 A ASP 15 ? A ASP 8 9 1 Y 1 A TRP 16 ? A TRP 9 10 1 Y 1 A PRO 17 ? A PRO 10 11 1 Y 1 A ALA 18 ? A ALA 11 12 1 Y 1 A LEU 19 ? A LEU 12 13 1 Y 1 A GLU 20 ? A GLU 13 14 1 Y 1 A ALA 21 ? A ALA 14 15 1 Y 1 A LEU 22 ? A LEU 15 16 1 Y 1 A ALA 23 ? A ALA 16 17 1 Y 1 A LYS 24 ? A LYS 17 18 1 Y 1 A THR 25 ? A THR 18 19 1 Y 1 A MET 26 ? A MET 19 20 1 Y 1 A PRO 27 ? A PRO 20 21 1 Y 1 A ALA 28 ? A ALA 21 22 1 Y 1 A ASP 29 ? A ASP 22 23 1 Y 1 A ALA 30 ? A ALA 23 24 1 Y 1 A GLY 31 ? A GLY 24 25 1 Y 1 A ALA 32 ? A ALA 25 26 1 Y 1 A ARG 33 ? A ARG 26 27 1 Y 1 A GLY 112 ? A GLY 105 28 1 Y 1 A GLY 113 ? A GLY 106 29 1 Y 1 A THR 114 ? A THR 107 30 1 Y 1 A LEU 115 ? A LEU 108 31 1 Y 1 A ASP 116 ? A ASP 109 32 1 Y 1 A THR 117 ? A THR 110 33 1 Y 1 A ALA 118 ? A ALA 111 34 1 Y 1 A GLY 119 ? A GLY 112 35 1 Y 1 A ASP 120 ? A ASP 113 36 1 Y 1 A GLU 121 ? A GLU 114 37 1 Y 1 A GLY 122 ? A GLY 115 38 1 Y 1 A GLY 123 ? A GLY 116 39 1 Y 1 A ILE 124 ? A ILE 117 40 1 Y 1 A THR 303 ? A THR 296 41 1 Y 1 A ALA 304 ? A ALA 297 42 1 Y 1 A LYS 305 ? A LYS 298 43 1 Y 1 A SER 306 ? A SER 299 44 1 Y 1 A TYR 307 ? A TYR 300 45 1 Y 1 A LEU 308 ? A LEU 301 46 1 Y 1 A GLN 309 ? A GLN 302 47 1 Y 1 A ILE 310 ? A ILE 303 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 PHE N N N N 236 PHE CA C N S 237 PHE C C N N 238 PHE O O N N 239 PHE CB C N N 240 PHE CG C Y N 241 PHE CD1 C Y N 242 PHE CD2 C Y N 243 PHE CE1 C Y N 244 PHE CE2 C Y N 245 PHE CZ C Y N 246 PHE OXT O N N 247 PHE H H N N 248 PHE H2 H N N 249 PHE HA H N N 250 PHE HB2 H N N 251 PHE HB3 H N N 252 PHE HD1 H N N 253 PHE HD2 H N N 254 PHE HE1 H N N 255 PHE HE2 H N N 256 PHE HZ H N N 257 PHE HXT H N N 258 PRO N N N N 259 PRO CA C N S 260 PRO C C N N 261 PRO O O N N 262 PRO CB C N N 263 PRO CG C N N 264 PRO CD C N N 265 PRO OXT O N N 266 PRO H H N N 267 PRO HA H N N 268 PRO HB2 H N N 269 PRO HB3 H N N 270 PRO HG2 H N N 271 PRO HG3 H N N 272 PRO HD2 H N N 273 PRO HD3 H N N 274 PRO HXT H N N 275 SER N N N N 276 SER CA C N S 277 SER C C N N 278 SER O O N N 279 SER CB C N N 280 SER OG O N N 281 SER OXT O N N 282 SER H H N N 283 SER H2 H N N 284 SER HA H N N 285 SER HB2 H N N 286 SER HB3 H N N 287 SER HG H N N 288 SER HXT H N N 289 THR N N N N 290 THR CA C N S 291 THR C C N N 292 THR O O N N 293 THR CB C N R 294 THR OG1 O N N 295 THR CG2 C N N 296 THR OXT O N N 297 THR H H N N 298 THR H2 H N N 299 THR HA H N N 300 THR HB H N N 301 THR HG1 H N N 302 THR HG21 H N N 303 THR HG22 H N N 304 THR HG23 H N N 305 THR HXT H N N 306 TRP N N N N 307 TRP CA C N S 308 TRP C C N N 309 TRP O O N N 310 TRP CB C N N 311 TRP CG C Y N 312 TRP CD1 C Y N 313 TRP CD2 C Y N 314 TRP NE1 N Y N 315 TRP CE2 C Y N 316 TRP CE3 C Y N 317 TRP CZ2 C Y N 318 TRP CZ3 C Y N 319 TRP CH2 C Y N 320 TRP OXT O N N 321 TRP H H N N 322 TRP H2 H N N 323 TRP HA H N N 324 TRP HB2 H N N 325 TRP HB3 H N N 326 TRP HD1 H N N 327 TRP HE1 H N N 328 TRP HE3 H N N 329 TRP HZ2 H N N 330 TRP HZ3 H N N 331 TRP HH2 H N N 332 TRP HXT H N N 333 TYR N N N N 334 TYR CA C N S 335 TYR C C N N 336 TYR O O N N 337 TYR CB C N N 338 TYR CG C Y N 339 TYR CD1 C Y N 340 TYR CD2 C Y N 341 TYR CE1 C Y N 342 TYR CE2 C Y N 343 TYR CZ C Y N 344 TYR OH O N N 345 TYR OXT O N N 346 TYR H H N N 347 TYR H2 H N N 348 TYR HA H N N 349 TYR HB2 H N N 350 TYR HB3 H N N 351 TYR HD1 H N N 352 TYR HD2 H N N 353 TYR HE1 H N N 354 TYR HE2 H N N 355 TYR HH H N N 356 TYR HXT H N N 357 VAL N N N N 358 VAL CA C N S 359 VAL C C N N 360 VAL O O N N 361 VAL CB C N N 362 VAL CG1 C N N 363 VAL CG2 C N N 364 VAL OXT O N N 365 VAL H H N N 366 VAL H2 H N N 367 VAL HA H N N 368 VAL HB H N N 369 VAL HG11 H N N 370 VAL HG12 H N N 371 VAL HG13 H N N 372 VAL HG21 H N N 373 VAL HG22 H N N 374 VAL HG23 H N N 375 VAL HXT H N N 376 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 THR N CA sing N N 277 THR N H sing N N 278 THR N H2 sing N N 279 THR CA C sing N N 280 THR CA CB sing N N 281 THR CA HA sing N N 282 THR C O doub N N 283 THR C OXT sing N N 284 THR CB OG1 sing N N 285 THR CB CG2 sing N N 286 THR CB HB sing N N 287 THR OG1 HG1 sing N N 288 THR CG2 HG21 sing N N 289 THR CG2 HG22 sing N N 290 THR CG2 HG23 sing N N 291 THR OXT HXT sing N N 292 TRP N CA sing N N 293 TRP N H sing N N 294 TRP N H2 sing N N 295 TRP CA C sing N N 296 TRP CA CB sing N N 297 TRP CA HA sing N N 298 TRP C O doub N N 299 TRP C OXT sing N N 300 TRP CB CG sing N N 301 TRP CB HB2 sing N N 302 TRP CB HB3 sing N N 303 TRP CG CD1 doub Y N 304 TRP CG CD2 sing Y N 305 TRP CD1 NE1 sing Y N 306 TRP CD1 HD1 sing N N 307 TRP CD2 CE2 doub Y N 308 TRP CD2 CE3 sing Y N 309 TRP NE1 CE2 sing Y N 310 TRP NE1 HE1 sing N N 311 TRP CE2 CZ2 sing Y N 312 TRP CE3 CZ3 doub Y N 313 TRP CE3 HE3 sing N N 314 TRP CZ2 CH2 doub Y N 315 TRP CZ2 HZ2 sing N N 316 TRP CZ3 CH2 sing Y N 317 TRP CZ3 HZ3 sing N N 318 TRP CH2 HH2 sing N N 319 TRP OXT HXT sing N N 320 TYR N CA sing N N 321 TYR N H sing N N 322 TYR N H2 sing N N 323 TYR CA C sing N N 324 TYR CA CB sing N N 325 TYR CA HA sing N N 326 TYR C O doub N N 327 TYR C OXT sing N N 328 TYR CB CG sing N N 329 TYR CB HB2 sing N N 330 TYR CB HB3 sing N N 331 TYR CG CD1 doub Y N 332 TYR CG CD2 sing Y N 333 TYR CD1 CE1 sing Y N 334 TYR CD1 HD1 sing N N 335 TYR CD2 CE2 doub Y N 336 TYR CD2 HD2 sing N N 337 TYR CE1 CZ doub Y N 338 TYR CE1 HE1 sing N N 339 TYR CE2 CZ sing Y N 340 TYR CE2 HE2 sing N N 341 TYR CZ OH sing N N 342 TYR OH HH sing N N 343 TYR OXT HXT sing N N 344 VAL N CA sing N N 345 VAL N H sing N N 346 VAL N H2 sing N N 347 VAL CA C sing N N 348 VAL CA CB sing N N 349 VAL CA HA sing N N 350 VAL C O doub N N 351 VAL C OXT sing N N 352 VAL CB CG1 sing N N 353 VAL CB CG2 sing N N 354 VAL CB HB sing N N 355 VAL CG1 HG11 sing N N 356 VAL CG1 HG12 sing N N 357 VAL CG1 HG13 sing N N 358 VAL CG2 HG21 sing N N 359 VAL CG2 HG22 sing N N 360 VAL CG2 HG23 sing N N 361 VAL OXT HXT sing N N 362 # _atom_sites.entry_id 2IXR _atom_sites.fract_transf_matrix[1][1] 0.009617 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008144 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020338 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_