data_2IYC # _entry.id 2IYC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2IYC PDBE EBI-29389 WWPDB D_1290029389 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2CKG unspecified 'THE STRUCTURE OF SENP1 SUMO-2 CO-COMPLEX SUGGESTS A STRUCTURAL BASIS FOR DISCRIMINATION BETWEEN SUMO PARALOGUES DURING PROCESSING' PDB 2CKH unspecified 'SENP1-SUMO2 COMPLEX' PDB 2IY0 unspecified 'SENP1 (MUTANT) SUMO1 RANGAP' PDB 2IY1 unspecified 'SENP1 (MUTANT) FULL LENGTH SUMO1' PDB 2IYD unspecified 'SENP1 COVALENT COMPLEX WITH SUMO-2' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2IYC _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2006-07-14 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Dong, C.' 1 'Naismith, J.H.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Senp1 Native Structure' 'To be Published' ? ? ? ? ? ? ? 0353 ? ? ? 1 'The Structure of Senp1 Sumo-2 Co-Complex Suggests a Structural Basis for Discrimination between Sumo Paralogues During Processing' Biochem.J. 397 279 ? 2006 BIJOAK UK 0264-6021 0043 ? 16553580 10.1042/BJ20052030 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Dong, C.' 1 primary 'Naismith, J.H.' 2 1 'Shen, L.' 3 1 'Dong, C.' 4 1 'Liu, H.' 5 1 'Naismith, J.H.' 6 1 'Hay, R.T.' 7 # _cell.entry_id 2IYC _cell.length_a 71.981 _cell.length_b 71.981 _cell.length_c 200.640 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2IYC _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'SENTRIN-SPECIFIC PROTEASE 1' 26932.211 2 3.4.22.- ? 'CATALYTIC FRAGMENT, RESIDUES 419-643' ? 2 water nat water 18.015 90 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'SENP1, SENTRIN/SUMO-SPECIFIC PROTEASE SENP1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;EFPEITEEMEKEIKNVFRNGNQDEVLSEAFRLTITRKDIQTLNHLNWLNDEIINFYMNMLMERSKEKGLPSVHAFNTFFF TKLKTAGYQAVKRWTKKVDVFSVDILLVPIHLGVHWCLAVVDFRKKNITYYDSMGGINNEACRILLQYLKQESIDKKRKE FDTNGWQLFSKKSQEIPQQMNGSDCGMFACKYADCITKDRPINFTQQHMPYFRKRMVWEILHRKLL ; _entity_poly.pdbx_seq_one_letter_code_can ;EFPEITEEMEKEIKNVFRNGNQDEVLSEAFRLTITRKDIQTLNHLNWLNDEIINFYMNMLMERSKEKGLPSVHAFNTFFF TKLKTAGYQAVKRWTKKVDVFSVDILLVPIHLGVHWCLAVVDFRKKNITYYDSMGGINNEACRILLQYLKQESIDKKRKE FDTNGWQLFSKKSQEIPQQMNGSDCGMFACKYADCITKDRPINFTQQHMPYFRKRMVWEILHRKLL ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 PHE n 1 3 PRO n 1 4 GLU n 1 5 ILE n 1 6 THR n 1 7 GLU n 1 8 GLU n 1 9 MET n 1 10 GLU n 1 11 LYS n 1 12 GLU n 1 13 ILE n 1 14 LYS n 1 15 ASN n 1 16 VAL n 1 17 PHE n 1 18 ARG n 1 19 ASN n 1 20 GLY n 1 21 ASN n 1 22 GLN n 1 23 ASP n 1 24 GLU n 1 25 VAL n 1 26 LEU n 1 27 SER n 1 28 GLU n 1 29 ALA n 1 30 PHE n 1 31 ARG n 1 32 LEU n 1 33 THR n 1 34 ILE n 1 35 THR n 1 36 ARG n 1 37 LYS n 1 38 ASP n 1 39 ILE n 1 40 GLN n 1 41 THR n 1 42 LEU n 1 43 ASN n 1 44 HIS n 1 45 LEU n 1 46 ASN n 1 47 TRP n 1 48 LEU n 1 49 ASN n 1 50 ASP n 1 51 GLU n 1 52 ILE n 1 53 ILE n 1 54 ASN n 1 55 PHE n 1 56 TYR n 1 57 MET n 1 58 ASN n 1 59 MET n 1 60 LEU n 1 61 MET n 1 62 GLU n 1 63 ARG n 1 64 SER n 1 65 LYS n 1 66 GLU n 1 67 LYS n 1 68 GLY n 1 69 LEU n 1 70 PRO n 1 71 SER n 1 72 VAL n 1 73 HIS n 1 74 ALA n 1 75 PHE n 1 76 ASN n 1 77 THR n 1 78 PHE n 1 79 PHE n 1 80 PHE n 1 81 THR n 1 82 LYS n 1 83 LEU n 1 84 LYS n 1 85 THR n 1 86 ALA n 1 87 GLY n 1 88 TYR n 1 89 GLN n 1 90 ALA n 1 91 VAL n 1 92 LYS n 1 93 ARG n 1 94 TRP n 1 95 THR n 1 96 LYS n 1 97 LYS n 1 98 VAL n 1 99 ASP n 1 100 VAL n 1 101 PHE n 1 102 SER n 1 103 VAL n 1 104 ASP n 1 105 ILE n 1 106 LEU n 1 107 LEU n 1 108 VAL n 1 109 PRO n 1 110 ILE n 1 111 HIS n 1 112 LEU n 1 113 GLY n 1 114 VAL n 1 115 HIS n 1 116 TRP n 1 117 CYS n 1 118 LEU n 1 119 ALA n 1 120 VAL n 1 121 VAL n 1 122 ASP n 1 123 PHE n 1 124 ARG n 1 125 LYS n 1 126 LYS n 1 127 ASN n 1 128 ILE n 1 129 THR n 1 130 TYR n 1 131 TYR n 1 132 ASP n 1 133 SER n 1 134 MET n 1 135 GLY n 1 136 GLY n 1 137 ILE n 1 138 ASN n 1 139 ASN n 1 140 GLU n 1 141 ALA n 1 142 CYS n 1 143 ARG n 1 144 ILE n 1 145 LEU n 1 146 LEU n 1 147 GLN n 1 148 TYR n 1 149 LEU n 1 150 LYS n 1 151 GLN n 1 152 GLU n 1 153 SER n 1 154 ILE n 1 155 ASP n 1 156 LYS n 1 157 LYS n 1 158 ARG n 1 159 LYS n 1 160 GLU n 1 161 PHE n 1 162 ASP n 1 163 THR n 1 164 ASN n 1 165 GLY n 1 166 TRP n 1 167 GLN n 1 168 LEU n 1 169 PHE n 1 170 SER n 1 171 LYS n 1 172 LYS n 1 173 SER n 1 174 GLN n 1 175 GLU n 1 176 ILE n 1 177 PRO n 1 178 GLN n 1 179 GLN n 1 180 MET n 1 181 ASN n 1 182 GLY n 1 183 SER n 1 184 ASP n 1 185 CYS n 1 186 GLY n 1 187 MET n 1 188 PHE n 1 189 ALA n 1 190 CYS n 1 191 LYS n 1 192 TYR n 1 193 ALA n 1 194 ASP n 1 195 CYS n 1 196 ILE n 1 197 THR n 1 198 LYS n 1 199 ASP n 1 200 ARG n 1 201 PRO n 1 202 ILE n 1 203 ASN n 1 204 PHE n 1 205 THR n 1 206 GLN n 1 207 GLN n 1 208 HIS n 1 209 MET n 1 210 PRO n 1 211 TYR n 1 212 PHE n 1 213 ARG n 1 214 LYS n 1 215 ARG n 1 216 MET n 1 217 VAL n 1 218 TRP n 1 219 GLU n 1 220 ILE n 1 221 LEU n 1 222 HIS n 1 223 ARG n 1 224 LYS n 1 225 LEU n 1 226 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP SENP1_HUMAN 1 ? ? Q9P0U3 ? 2 PDB 2IYC 1 ? ? 2IYC ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2IYC A 1 ? 174 ? Q9P0U3 419 ? 592 ? 419 592 2 2 2IYC A 175 ? 175 ? 2IYC 593 ? 593 ? 593 593 3 1 2IYC A 176 ? 226 ? Q9P0U3 593 ? 643 ? 594 644 4 1 2IYC B 1 ? 174 ? Q9P0U3 419 ? 592 ? 419 592 5 2 2IYC B 175 ? 175 ? 2IYC 593 ? 593 ? 593 593 6 1 2IYC B 176 ? 226 ? Q9P0U3 593 ? 643 ? 594 644 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2IYC _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.77 _exptl_crystal.density_percent_sol 55.22 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-4' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-4 _diffrn_source.pdbx_wavelength 0.979 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2IYC _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 54.000 _reflns.d_resolution_high 2.450 _reflns.number_obs 21832 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.10000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 19.0000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 8.800 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.45 _reflns_shell.d_res_low 2.51 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.43000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.000 _reflns_shell.pdbx_redundancy 9.00 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2IYC _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.ls_number_reflns_obs 21832 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 53.00 _refine.ls_d_res_high 2.45 _refine.ls_percent_reflns_obs 100.0 _refine.ls_R_factor_obs 0.219 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.217 _refine.ls_R_factor_R_free 0.267 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.900 _refine.ls_number_reflns_R_free 1136 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.942 _refine.correlation_coeff_Fo_to_Fc_free 0.912 _refine.B_iso_mean 28.97 _refine.aniso_B[1][1] 0.15000 _refine.aniso_B[2][2] 0.15000 _refine.aniso_B[3][3] -0.23000 _refine.aniso_B[1][2] 0.08000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.THIS REPLACES PREVIOUS ENTRY WHICH WHICH HAD SEQUENCE CONFLICTS. THE BOND DEVIATIONS FOR GLU AND HIS ARE CAUSED BY DENSITY ON THE SYMMETRY POSITION. THIS SUCKS THE SIDE CHAINS IN. A WATER HERE IS REJECTED BY ARWARP ETC. ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.422 _refine.pdbx_overall_ESU_R_Free 0.280 _refine.overall_SU_ML 0.229 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 20.526 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3782 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 90 _refine_hist.number_atoms_total 3872 _refine_hist.d_res_high 2.45 _refine_hist.d_res_low 53.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.015 0.022 ? 3868 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.483 1.940 ? 5202 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.240 5.000 ? 450 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 39.163 24.242 ? 198 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 19.043 15.000 ? 746 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 15.565 15.000 ? 24 'X-RAY DIFFRACTION' ? r_chiral_restr 0.099 0.200 ? 552 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 2902 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.232 0.200 ? 1801 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.313 0.200 ? 2628 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.173 0.200 ? 179 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.382 0.200 ? 91 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.355 0.200 ? 15 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.576 1.500 ? 2324 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.892 2.000 ? 3660 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 1.672 3.000 ? 1768 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 2.482 4.500 ? 1542 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso 1 A 844 0.06 0.05 'tight positional' 1 1 'X-RAY DIFFRACTION' ? ? ? 1 A 915 0.53 0.50 'medium positional' 1 2 'X-RAY DIFFRACTION' ? ? ? 1 A 844 0.11 0.50 'tight thermal' 1 3 'X-RAY DIFFRACTION' ? ? ? 1 A 915 0.77 2.00 'medium thermal' 1 4 'X-RAY DIFFRACTION' ? ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.45 _refine_ls_shell.d_res_low 2.51 _refine_ls_shell.number_reflns_R_work 1557 _refine_ls_shell.R_factor_R_work 0.2960 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.3280 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 87 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _struct_ncs_dom.id _struct_ncs_dom.details _struct_ncs_dom.pdbx_ens_id 1 A 1 2 B 1 # loop_ _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.selection_details 1 A 430 A 640 1 2 ? ? ? ? ? ? ? ? 1 ? 2 B 430 B 640 1 2 ? ? ? ? ? ? ? ? 1 ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 2IYC _struct.title 'SENP1 native structure' _struct.pdbx_descriptor 'SENTRIN-SPECIFIC PROTEASE 1 (E.C.3.4.22.-)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2IYC _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'PROTEASE, HYDROLASE, THIOL PROTEASE, NUCLEAR PROTEIN, UBL CONJUGATION PATHWAY' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 6 ? PHE A 17 ? THR A 424 PHE A 435 1 ? 12 HELX_P HELX_P2 2 ARG A 36 ? THR A 41 ? ARG A 454 THR A 459 1 ? 6 HELX_P HELX_P3 3 ASN A 49 ? SER A 64 ? ASN A 467 SER A 482 1 ? 16 HELX_P HELX_P4 4 THR A 77 ? GLY A 87 ? THR A 495 GLY A 505 1 ? 11 HELX_P HELX_P5 5 TYR A 88 ? LYS A 96 ? TYR A 506 LYS A 514 5 ? 9 HELX_P HELX_P6 6 ASP A 99 ? VAL A 103 ? ASP A 517 VAL A 521 5 ? 5 HELX_P HELX_P7 7 ASN A 138 ? ARG A 158 ? ASN A 556 ARG A 576 1 ? 21 HELX_P HELX_P8 8 ASP A 184 ? LYS A 198 ? ASP A 602 LYS A 616 1 ? 15 HELX_P HELX_P9 9 THR A 205 ? GLN A 207 ? THR A 623 GLN A 625 5 ? 3 HELX_P HELX_P10 10 HIS A 208 ? ARG A 223 ? HIS A 626 ARG A 641 1 ? 16 HELX_P HELX_P11 11 THR B 6 ? PHE B 17 ? THR B 424 PHE B 435 1 ? 12 HELX_P HELX_P12 12 ARG B 36 ? THR B 41 ? ARG B 454 THR B 459 1 ? 6 HELX_P HELX_P13 13 ASN B 49 ? SER B 64 ? ASN B 467 SER B 482 1 ? 16 HELX_P HELX_P14 14 THR B 77 ? GLY B 87 ? THR B 495 GLY B 505 1 ? 11 HELX_P HELX_P15 15 TYR B 88 ? LYS B 96 ? TYR B 506 LYS B 514 5 ? 9 HELX_P HELX_P16 16 ASP B 99 ? VAL B 103 ? ASP B 517 VAL B 521 5 ? 5 HELX_P HELX_P17 17 ASN B 138 ? ARG B 158 ? ASN B 556 ARG B 576 1 ? 21 HELX_P HELX_P18 18 ASN B 181 ? SER B 183 ? ASN B 599 SER B 601 5 ? 3 HELX_P HELX_P19 19 ASP B 184 ? LYS B 198 ? ASP B 602 LYS B 616 1 ? 15 HELX_P HELX_P20 20 THR B 205 ? GLN B 207 ? THR B 623 GLN B 625 5 ? 3 HELX_P HELX_P21 21 HIS B 208 ? ARG B 223 ? HIS B 626 ARG B 641 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 2 ? AB ? 5 ? BA ? 2 ? BB ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AB 1 2 ? parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel AB 4 5 ? parallel BA 1 2 ? anti-parallel BB 1 2 ? parallel BB 2 3 ? anti-parallel BB 3 4 ? anti-parallel BB 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 VAL A 25 ? ALA A 29 ? VAL A 443 ALA A 447 AA 2 LEU A 32 ? THR A 35 ? LEU A 450 THR A 453 AB 1 VAL A 72 ? ALA A 74 ? VAL A 490 ALA A 492 AB 2 ILE A 105 ? LEU A 112 ? ILE A 523 LEU A 530 AB 3 HIS A 115 ? ASP A 122 ? HIS A 533 ASP A 540 AB 4 ASN A 127 ? TYR A 131 ? ASN A 545 TYR A 549 AB 5 GLN A 167 ? SER A 170 ? GLN A 585 SER A 588 BA 1 VAL B 25 ? ALA B 29 ? VAL B 443 ALA B 447 BA 2 LEU B 32 ? THR B 35 ? LEU B 450 THR B 453 BB 1 VAL B 72 ? ALA B 74 ? VAL B 490 ALA B 492 BB 2 ILE B 105 ? LEU B 112 ? ILE B 523 LEU B 530 BB 3 HIS B 115 ? ASP B 122 ? HIS B 533 ASP B 540 BB 4 ASN B 127 ? TYR B 131 ? ASN B 545 TYR B 549 BB 5 GLN B 167 ? SER B 170 ? GLN B 585 SER B 588 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N ALA A 29 ? N ALA A 447 O LEU A 32 ? O LEU A 450 AB 1 2 N HIS A 73 ? N HIS A 491 O ILE A 105 ? O ILE A 523 AB 2 3 N LEU A 112 ? N LEU A 530 O HIS A 115 ? O HIS A 533 AB 3 4 N ASP A 122 ? N ASP A 540 O ASN A 127 ? O ASN A 545 AB 4 5 N ILE A 128 ? N ILE A 546 O GLN A 167 ? O GLN A 585 BA 1 2 N ALA B 29 ? N ALA B 447 O LEU B 32 ? O LEU B 450 BB 1 2 N HIS B 73 ? N HIS B 491 O ILE B 105 ? O ILE B 523 BB 2 3 N LEU B 112 ? N LEU B 530 O HIS B 115 ? O HIS B 533 BB 3 4 N ASP B 122 ? N ASP B 540 O ASN B 127 ? O ASN B 545 BB 4 5 N ILE B 128 ? N ILE B 546 O GLN B 167 ? O GLN B 585 # _database_PDB_matrix.entry_id 2IYC _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2IYC _atom_sites.fract_transf_matrix[1][1] 0.013893 _atom_sites.fract_transf_matrix[1][2] 0.008021 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016042 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004984 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 419 419 GLU GLU A . n A 1 2 PHE 2 420 420 PHE PHE A . n A 1 3 PRO 3 421 421 PRO PRO A . n A 1 4 GLU 4 422 422 GLU GLU A . n A 1 5 ILE 5 423 423 ILE ILE A . n A 1 6 THR 6 424 424 THR THR A . n A 1 7 GLU 7 425 425 GLU GLU A . n A 1 8 GLU 8 426 426 GLU GLU A . n A 1 9 MET 9 427 427 MET MET A . n A 1 10 GLU 10 428 428 GLU GLU A . n A 1 11 LYS 11 429 429 LYS LYS A . n A 1 12 GLU 12 430 430 GLU GLU A . n A 1 13 ILE 13 431 431 ILE ILE A . n A 1 14 LYS 14 432 432 LYS LYS A . n A 1 15 ASN 15 433 433 ASN ASN A . n A 1 16 VAL 16 434 434 VAL VAL A . n A 1 17 PHE 17 435 435 PHE PHE A . n A 1 18 ARG 18 436 436 ARG ARG A . n A 1 19 ASN 19 437 437 ASN ASN A . n A 1 20 GLY 20 438 438 GLY GLY A . n A 1 21 ASN 21 439 439 ASN ASN A . n A 1 22 GLN 22 440 440 GLN GLN A . n A 1 23 ASP 23 441 441 ASP ASP A . n A 1 24 GLU 24 442 442 GLU GLU A . n A 1 25 VAL 25 443 443 VAL VAL A . n A 1 26 LEU 26 444 444 LEU LEU A . n A 1 27 SER 27 445 445 SER SER A . n A 1 28 GLU 28 446 446 GLU GLU A . n A 1 29 ALA 29 447 447 ALA ALA A . n A 1 30 PHE 30 448 448 PHE PHE A . n A 1 31 ARG 31 449 449 ARG ARG A . n A 1 32 LEU 32 450 450 LEU LEU A . n A 1 33 THR 33 451 451 THR THR A . n A 1 34 ILE 34 452 452 ILE ILE A . n A 1 35 THR 35 453 453 THR THR A . n A 1 36 ARG 36 454 454 ARG ARG A . n A 1 37 LYS 37 455 455 LYS LYS A . n A 1 38 ASP 38 456 456 ASP ASP A . n A 1 39 ILE 39 457 457 ILE ILE A . n A 1 40 GLN 40 458 458 GLN GLN A . n A 1 41 THR 41 459 459 THR THR A . n A 1 42 LEU 42 460 460 LEU LEU A . n A 1 43 ASN 43 461 461 ASN ASN A . n A 1 44 HIS 44 462 462 HIS HIS A . n A 1 45 LEU 45 463 463 LEU LEU A . n A 1 46 ASN 46 464 464 ASN ASN A . n A 1 47 TRP 47 465 465 TRP TRP A . n A 1 48 LEU 48 466 466 LEU LEU A . n A 1 49 ASN 49 467 467 ASN ASN A . n A 1 50 ASP 50 468 468 ASP ASP A . n A 1 51 GLU 51 469 469 GLU GLU A . n A 1 52 ILE 52 470 470 ILE ILE A . n A 1 53 ILE 53 471 471 ILE ILE A . n A 1 54 ASN 54 472 472 ASN ASN A . n A 1 55 PHE 55 473 473 PHE PHE A . n A 1 56 TYR 56 474 474 TYR TYR A . n A 1 57 MET 57 475 475 MET MET A . n A 1 58 ASN 58 476 476 ASN ASN A . n A 1 59 MET 59 477 477 MET MET A . n A 1 60 LEU 60 478 478 LEU LEU A . n A 1 61 MET 61 479 479 MET MET A . n A 1 62 GLU 62 480 480 GLU GLU A . n A 1 63 ARG 63 481 481 ARG ARG A . n A 1 64 SER 64 482 482 SER SER A . n A 1 65 LYS 65 483 483 LYS LYS A . n A 1 66 GLU 66 484 484 GLU GLU A . n A 1 67 LYS 67 485 485 LYS LYS A . n A 1 68 GLY 68 486 486 GLY GLY A . n A 1 69 LEU 69 487 487 LEU LEU A . n A 1 70 PRO 70 488 488 PRO PRO A . n A 1 71 SER 71 489 489 SER SER A . n A 1 72 VAL 72 490 490 VAL VAL A . n A 1 73 HIS 73 491 491 HIS HIS A . n A 1 74 ALA 74 492 492 ALA ALA A . n A 1 75 PHE 75 493 493 PHE PHE A . n A 1 76 ASN 76 494 494 ASN ASN A . n A 1 77 THR 77 495 495 THR THR A . n A 1 78 PHE 78 496 496 PHE PHE A . n A 1 79 PHE 79 497 497 PHE PHE A . n A 1 80 PHE 80 498 498 PHE PHE A . n A 1 81 THR 81 499 499 THR THR A . n A 1 82 LYS 82 500 500 LYS LYS A . n A 1 83 LEU 83 501 501 LEU LEU A . n A 1 84 LYS 84 502 502 LYS LYS A . n A 1 85 THR 85 503 503 THR THR A . n A 1 86 ALA 86 504 504 ALA ALA A . n A 1 87 GLY 87 505 505 GLY GLY A . n A 1 88 TYR 88 506 506 TYR TYR A . n A 1 89 GLN 89 507 507 GLN GLN A . n A 1 90 ALA 90 508 508 ALA ALA A . n A 1 91 VAL 91 509 509 VAL VAL A . n A 1 92 LYS 92 510 510 LYS LYS A . n A 1 93 ARG 93 511 511 ARG ARG A . n A 1 94 TRP 94 512 512 TRP TRP A . n A 1 95 THR 95 513 513 THR THR A . n A 1 96 LYS 96 514 514 LYS LYS A . n A 1 97 LYS 97 515 515 LYS LYS A . n A 1 98 VAL 98 516 516 VAL VAL A . n A 1 99 ASP 99 517 517 ASP ASP A . n A 1 100 VAL 100 518 518 VAL VAL A . n A 1 101 PHE 101 519 519 PHE PHE A . n A 1 102 SER 102 520 520 SER SER A . n A 1 103 VAL 103 521 521 VAL VAL A . n A 1 104 ASP 104 522 522 ASP ASP A . n A 1 105 ILE 105 523 523 ILE ILE A . n A 1 106 LEU 106 524 524 LEU LEU A . n A 1 107 LEU 107 525 525 LEU LEU A . n A 1 108 VAL 108 526 526 VAL VAL A . n A 1 109 PRO 109 527 527 PRO PRO A . n A 1 110 ILE 110 528 528 ILE ILE A . n A 1 111 HIS 111 529 529 HIS HIS A . n A 1 112 LEU 112 530 530 LEU LEU A . n A 1 113 GLY 113 531 531 GLY GLY A . n A 1 114 VAL 114 532 532 VAL VAL A . n A 1 115 HIS 115 533 533 HIS HIS A . n A 1 116 TRP 116 534 534 TRP TRP A . n A 1 117 CYS 117 535 535 CYS CYS A . n A 1 118 LEU 118 536 536 LEU LEU A . n A 1 119 ALA 119 537 537 ALA ALA A . n A 1 120 VAL 120 538 538 VAL VAL A . n A 1 121 VAL 121 539 539 VAL VAL A . n A 1 122 ASP 122 540 540 ASP ASP A . n A 1 123 PHE 123 541 541 PHE PHE A . n A 1 124 ARG 124 542 542 ARG ARG A . n A 1 125 LYS 125 543 543 LYS LYS A . n A 1 126 LYS 126 544 544 LYS LYS A . n A 1 127 ASN 127 545 545 ASN ASN A . n A 1 128 ILE 128 546 546 ILE ILE A . n A 1 129 THR 129 547 547 THR THR A . n A 1 130 TYR 130 548 548 TYR TYR A . n A 1 131 TYR 131 549 549 TYR TYR A . n A 1 132 ASP 132 550 550 ASP ASP A . n A 1 133 SER 133 551 551 SER SER A . n A 1 134 MET 134 552 552 MET MET A . n A 1 135 GLY 135 553 553 GLY GLY A . n A 1 136 GLY 136 554 554 GLY GLY A . n A 1 137 ILE 137 555 555 ILE ILE A . n A 1 138 ASN 138 556 556 ASN ASN A . n A 1 139 ASN 139 557 557 ASN ASN A . n A 1 140 GLU 140 558 558 GLU GLU A . n A 1 141 ALA 141 559 559 ALA ALA A . n A 1 142 CYS 142 560 560 CYS CYS A . n A 1 143 ARG 143 561 561 ARG ARG A . n A 1 144 ILE 144 562 562 ILE ILE A . n A 1 145 LEU 145 563 563 LEU LEU A . n A 1 146 LEU 146 564 564 LEU LEU A . n A 1 147 GLN 147 565 565 GLN GLN A . n A 1 148 TYR 148 566 566 TYR TYR A . n A 1 149 LEU 149 567 567 LEU LEU A . n A 1 150 LYS 150 568 568 LYS LYS A . n A 1 151 GLN 151 569 569 GLN GLN A . n A 1 152 GLU 152 570 570 GLU GLU A . n A 1 153 SER 153 571 571 SER SER A . n A 1 154 ILE 154 572 572 ILE ILE A . n A 1 155 ASP 155 573 573 ASP ASP A . n A 1 156 LYS 156 574 574 LYS LYS A . n A 1 157 LYS 157 575 575 LYS LYS A . n A 1 158 ARG 158 576 576 ARG ARG A . n A 1 159 LYS 159 577 577 LYS LYS A . n A 1 160 GLU 160 578 578 GLU GLU A . n A 1 161 PHE 161 579 579 PHE PHE A . n A 1 162 ASP 162 580 580 ASP ASP A . n A 1 163 THR 163 581 581 THR THR A . n A 1 164 ASN 164 582 582 ASN ASN A . n A 1 165 GLY 165 583 583 GLY GLY A . n A 1 166 TRP 166 584 584 TRP TRP A . n A 1 167 GLN 167 585 585 GLN GLN A . n A 1 168 LEU 168 586 586 LEU LEU A . n A 1 169 PHE 169 587 587 PHE PHE A . n A 1 170 SER 170 588 588 SER SER A . n A 1 171 LYS 171 589 589 LYS LYS A . n A 1 172 LYS 172 590 590 LYS LYS A . n A 1 173 SER 173 591 591 SER SER A . n A 1 174 GLN 174 592 592 GLN GLN A . n A 1 175 GLU 175 593 593 GLU GLU A . n A 1 176 ILE 176 594 594 ILE ILE A . n A 1 177 PRO 177 595 595 PRO PRO A . n A 1 178 GLN 178 596 596 GLN GLN A . n A 1 179 GLN 179 597 597 GLN GLN A . n A 1 180 MET 180 598 598 MET MET A . n A 1 181 ASN 181 599 599 ASN ASN A . n A 1 182 GLY 182 600 600 GLY GLY A . n A 1 183 SER 183 601 601 SER SER A . n A 1 184 ASP 184 602 602 ASP ASP A . n A 1 185 CYS 185 603 603 CYS CYS A . n A 1 186 GLY 186 604 604 GLY GLY A . n A 1 187 MET 187 605 605 MET MET A . n A 1 188 PHE 188 606 606 PHE PHE A . n A 1 189 ALA 189 607 607 ALA ALA A . n A 1 190 CYS 190 608 608 CYS CYS A . n A 1 191 LYS 191 609 609 LYS LYS A . n A 1 192 TYR 192 610 610 TYR TYR A . n A 1 193 ALA 193 611 611 ALA ALA A . n A 1 194 ASP 194 612 612 ASP ASP A . n A 1 195 CYS 195 613 613 CYS CYS A . n A 1 196 ILE 196 614 614 ILE ILE A . n A 1 197 THR 197 615 615 THR THR A . n A 1 198 LYS 198 616 616 LYS LYS A . n A 1 199 ASP 199 617 617 ASP ASP A . n A 1 200 ARG 200 618 618 ARG ARG A . n A 1 201 PRO 201 619 619 PRO PRO A . n A 1 202 ILE 202 620 620 ILE ILE A . n A 1 203 ASN 203 621 621 ASN ASN A . n A 1 204 PHE 204 622 622 PHE PHE A . n A 1 205 THR 205 623 623 THR THR A . n A 1 206 GLN 206 624 624 GLN GLN A . n A 1 207 GLN 207 625 625 GLN GLN A . n A 1 208 HIS 208 626 626 HIS HIS A . n A 1 209 MET 209 627 627 MET MET A . n A 1 210 PRO 210 628 628 PRO PRO A . n A 1 211 TYR 211 629 629 TYR TYR A . n A 1 212 PHE 212 630 630 PHE PHE A . n A 1 213 ARG 213 631 631 ARG ARG A . n A 1 214 LYS 214 632 632 LYS LYS A . n A 1 215 ARG 215 633 633 ARG ARG A . n A 1 216 MET 216 634 634 MET MET A . n A 1 217 VAL 217 635 635 VAL VAL A . n A 1 218 TRP 218 636 636 TRP TRP A . n A 1 219 GLU 219 637 637 GLU GLU A . n A 1 220 ILE 220 638 638 ILE ILE A . n A 1 221 LEU 221 639 639 LEU LEU A . n A 1 222 HIS 222 640 640 HIS HIS A . n A 1 223 ARG 223 641 641 ARG ARG A . n A 1 224 LYS 224 642 642 LYS LYS A . n A 1 225 LEU 225 643 643 LEU LEU A . n A 1 226 LEU 226 644 644 LEU LEU A . n B 1 1 GLU 1 419 419 GLU GLU B . n B 1 2 PHE 2 420 420 PHE PHE B . n B 1 3 PRO 3 421 421 PRO PRO B . n B 1 4 GLU 4 422 422 GLU GLU B . n B 1 5 ILE 5 423 423 ILE ILE B . n B 1 6 THR 6 424 424 THR THR B . n B 1 7 GLU 7 425 425 GLU GLU B . n B 1 8 GLU 8 426 426 GLU GLU B . n B 1 9 MET 9 427 427 MET MET B . n B 1 10 GLU 10 428 428 GLU GLU B . n B 1 11 LYS 11 429 429 LYS LYS B . n B 1 12 GLU 12 430 430 GLU GLU B . n B 1 13 ILE 13 431 431 ILE ILE B . n B 1 14 LYS 14 432 432 LYS LYS B . n B 1 15 ASN 15 433 433 ASN ASN B . n B 1 16 VAL 16 434 434 VAL VAL B . n B 1 17 PHE 17 435 435 PHE PHE B . n B 1 18 ARG 18 436 436 ARG ARG B . n B 1 19 ASN 19 437 437 ASN ASN B . n B 1 20 GLY 20 438 438 GLY GLY B . n B 1 21 ASN 21 439 439 ASN ASN B . n B 1 22 GLN 22 440 440 GLN GLN B . n B 1 23 ASP 23 441 441 ASP ASP B . n B 1 24 GLU 24 442 442 GLU GLU B . n B 1 25 VAL 25 443 443 VAL VAL B . n B 1 26 LEU 26 444 444 LEU LEU B . n B 1 27 SER 27 445 445 SER SER B . n B 1 28 GLU 28 446 446 GLU GLU B . n B 1 29 ALA 29 447 447 ALA ALA B . n B 1 30 PHE 30 448 448 PHE PHE B . n B 1 31 ARG 31 449 449 ARG ARG B . n B 1 32 LEU 32 450 450 LEU LEU B . n B 1 33 THR 33 451 451 THR THR B . n B 1 34 ILE 34 452 452 ILE ILE B . n B 1 35 THR 35 453 453 THR THR B . n B 1 36 ARG 36 454 454 ARG ARG B . n B 1 37 LYS 37 455 455 LYS LYS B . n B 1 38 ASP 38 456 456 ASP ASP B . n B 1 39 ILE 39 457 457 ILE ILE B . n B 1 40 GLN 40 458 458 GLN GLN B . n B 1 41 THR 41 459 459 THR THR B . n B 1 42 LEU 42 460 460 LEU LEU B . n B 1 43 ASN 43 461 461 ASN ASN B . n B 1 44 HIS 44 462 462 HIS HIS B . n B 1 45 LEU 45 463 463 LEU LEU B . n B 1 46 ASN 46 464 464 ASN ASN B . n B 1 47 TRP 47 465 465 TRP TRP B . n B 1 48 LEU 48 466 466 LEU LEU B . n B 1 49 ASN 49 467 467 ASN ASN B . n B 1 50 ASP 50 468 468 ASP ASP B . n B 1 51 GLU 51 469 469 GLU GLU B . n B 1 52 ILE 52 470 470 ILE ILE B . n B 1 53 ILE 53 471 471 ILE ILE B . n B 1 54 ASN 54 472 472 ASN ASN B . n B 1 55 PHE 55 473 473 PHE PHE B . n B 1 56 TYR 56 474 474 TYR TYR B . n B 1 57 MET 57 475 475 MET MET B . n B 1 58 ASN 58 476 476 ASN ASN B . n B 1 59 MET 59 477 477 MET MET B . n B 1 60 LEU 60 478 478 LEU LEU B . n B 1 61 MET 61 479 479 MET MET B . n B 1 62 GLU 62 480 480 GLU GLU B . n B 1 63 ARG 63 481 481 ARG ARG B . n B 1 64 SER 64 482 482 SER SER B . n B 1 65 LYS 65 483 483 LYS LYS B . n B 1 66 GLU 66 484 484 GLU GLU B . n B 1 67 LYS 67 485 485 LYS LYS B . n B 1 68 GLY 68 486 486 GLY GLY B . n B 1 69 LEU 69 487 487 LEU LEU B . n B 1 70 PRO 70 488 488 PRO PRO B . n B 1 71 SER 71 489 489 SER SER B . n B 1 72 VAL 72 490 490 VAL VAL B . n B 1 73 HIS 73 491 491 HIS HIS B . n B 1 74 ALA 74 492 492 ALA ALA B . n B 1 75 PHE 75 493 493 PHE PHE B . n B 1 76 ASN 76 494 494 ASN ASN B . n B 1 77 THR 77 495 495 THR THR B . n B 1 78 PHE 78 496 496 PHE PHE B . n B 1 79 PHE 79 497 497 PHE PHE B . n B 1 80 PHE 80 498 498 PHE PHE B . n B 1 81 THR 81 499 499 THR THR B . n B 1 82 LYS 82 500 500 LYS LYS B . n B 1 83 LEU 83 501 501 LEU LEU B . n B 1 84 LYS 84 502 502 LYS LYS B . n B 1 85 THR 85 503 503 THR THR B . n B 1 86 ALA 86 504 504 ALA ALA B . n B 1 87 GLY 87 505 505 GLY GLY B . n B 1 88 TYR 88 506 506 TYR TYR B . n B 1 89 GLN 89 507 507 GLN GLN B . n B 1 90 ALA 90 508 508 ALA ALA B . n B 1 91 VAL 91 509 509 VAL VAL B . n B 1 92 LYS 92 510 510 LYS LYS B . n B 1 93 ARG 93 511 511 ARG ARG B . n B 1 94 TRP 94 512 512 TRP TRP B . n B 1 95 THR 95 513 513 THR THR B . n B 1 96 LYS 96 514 514 LYS LYS B . n B 1 97 LYS 97 515 515 LYS LYS B . n B 1 98 VAL 98 516 516 VAL VAL B . n B 1 99 ASP 99 517 517 ASP ASP B . n B 1 100 VAL 100 518 518 VAL VAL B . n B 1 101 PHE 101 519 519 PHE PHE B . n B 1 102 SER 102 520 520 SER SER B . n B 1 103 VAL 103 521 521 VAL VAL B . n B 1 104 ASP 104 522 522 ASP ASP B . n B 1 105 ILE 105 523 523 ILE ILE B . n B 1 106 LEU 106 524 524 LEU LEU B . n B 1 107 LEU 107 525 525 LEU LEU B . n B 1 108 VAL 108 526 526 VAL VAL B . n B 1 109 PRO 109 527 527 PRO PRO B . n B 1 110 ILE 110 528 528 ILE ILE B . n B 1 111 HIS 111 529 529 HIS HIS B . n B 1 112 LEU 112 530 530 LEU LEU B . n B 1 113 GLY 113 531 531 GLY GLY B . n B 1 114 VAL 114 532 532 VAL VAL B . n B 1 115 HIS 115 533 533 HIS HIS B . n B 1 116 TRP 116 534 534 TRP TRP B . n B 1 117 CYS 117 535 535 CYS CYS B . n B 1 118 LEU 118 536 536 LEU LEU B . n B 1 119 ALA 119 537 537 ALA ALA B . n B 1 120 VAL 120 538 538 VAL VAL B . n B 1 121 VAL 121 539 539 VAL VAL B . n B 1 122 ASP 122 540 540 ASP ASP B . n B 1 123 PHE 123 541 541 PHE PHE B . n B 1 124 ARG 124 542 542 ARG ARG B . n B 1 125 LYS 125 543 543 LYS LYS B . n B 1 126 LYS 126 544 544 LYS LYS B . n B 1 127 ASN 127 545 545 ASN ASN B . n B 1 128 ILE 128 546 546 ILE ILE B . n B 1 129 THR 129 547 547 THR THR B . n B 1 130 TYR 130 548 548 TYR TYR B . n B 1 131 TYR 131 549 549 TYR TYR B . n B 1 132 ASP 132 550 550 ASP ASP B . n B 1 133 SER 133 551 551 SER SER B . n B 1 134 MET 134 552 552 MET MET B . n B 1 135 GLY 135 553 553 GLY GLY B . n B 1 136 GLY 136 554 554 GLY GLY B . n B 1 137 ILE 137 555 555 ILE ILE B . n B 1 138 ASN 138 556 556 ASN ASN B . n B 1 139 ASN 139 557 557 ASN ASN B . n B 1 140 GLU 140 558 558 GLU GLU B . n B 1 141 ALA 141 559 559 ALA ALA B . n B 1 142 CYS 142 560 560 CYS CYS B . n B 1 143 ARG 143 561 561 ARG ARG B . n B 1 144 ILE 144 562 562 ILE ILE B . n B 1 145 LEU 145 563 563 LEU LEU B . n B 1 146 LEU 146 564 564 LEU LEU B . n B 1 147 GLN 147 565 565 GLN GLN B . n B 1 148 TYR 148 566 566 TYR TYR B . n B 1 149 LEU 149 567 567 LEU LEU B . n B 1 150 LYS 150 568 568 LYS LYS B . n B 1 151 GLN 151 569 569 GLN GLN B . n B 1 152 GLU 152 570 570 GLU GLU B . n B 1 153 SER 153 571 571 SER SER B . n B 1 154 ILE 154 572 572 ILE ILE B . n B 1 155 ASP 155 573 573 ASP ASP B . n B 1 156 LYS 156 574 574 LYS LYS B . n B 1 157 LYS 157 575 575 LYS LYS B . n B 1 158 ARG 158 576 576 ARG ARG B . n B 1 159 LYS 159 577 577 LYS LYS B . n B 1 160 GLU 160 578 578 GLU GLU B . n B 1 161 PHE 161 579 579 PHE PHE B . n B 1 162 ASP 162 580 580 ASP ASP B . n B 1 163 THR 163 581 581 THR THR B . n B 1 164 ASN 164 582 582 ASN ASN B . n B 1 165 GLY 165 583 583 GLY GLY B . n B 1 166 TRP 166 584 584 TRP TRP B . n B 1 167 GLN 167 585 585 GLN GLN B . n B 1 168 LEU 168 586 586 LEU LEU B . n B 1 169 PHE 169 587 587 PHE PHE B . n B 1 170 SER 170 588 588 SER SER B . n B 1 171 LYS 171 589 589 LYS LYS B . n B 1 172 LYS 172 590 590 LYS LYS B . n B 1 173 SER 173 591 591 SER SER B . n B 1 174 GLN 174 592 592 GLN GLN B . n B 1 175 GLU 175 593 593 GLU GLU B . n B 1 176 ILE 176 594 594 ILE ILE B . n B 1 177 PRO 177 595 595 PRO PRO B . n B 1 178 GLN 178 596 596 GLN GLN B . n B 1 179 GLN 179 597 597 GLN GLN B . n B 1 180 MET 180 598 598 MET MET B . n B 1 181 ASN 181 599 599 ASN ASN B . n B 1 182 GLY 182 600 600 GLY GLY B . n B 1 183 SER 183 601 601 SER SER B . n B 1 184 ASP 184 602 602 ASP ASP B . n B 1 185 CYS 185 603 603 CYS CYS B . n B 1 186 GLY 186 604 604 GLY GLY B . n B 1 187 MET 187 605 605 MET MET B . n B 1 188 PHE 188 606 606 PHE PHE B . n B 1 189 ALA 189 607 607 ALA ALA B . n B 1 190 CYS 190 608 608 CYS CYS B . n B 1 191 LYS 191 609 609 LYS LYS B . n B 1 192 TYR 192 610 610 TYR TYR B . n B 1 193 ALA 193 611 611 ALA ALA B . n B 1 194 ASP 194 612 612 ASP ASP B . n B 1 195 CYS 195 613 613 CYS CYS B . n B 1 196 ILE 196 614 614 ILE ILE B . n B 1 197 THR 197 615 615 THR THR B . n B 1 198 LYS 198 616 616 LYS LYS B . n B 1 199 ASP 199 617 617 ASP ASP B . n B 1 200 ARG 200 618 618 ARG ARG B . n B 1 201 PRO 201 619 619 PRO PRO B . n B 1 202 ILE 202 620 620 ILE ILE B . n B 1 203 ASN 203 621 621 ASN ASN B . n B 1 204 PHE 204 622 622 PHE PHE B . n B 1 205 THR 205 623 623 THR THR B . n B 1 206 GLN 206 624 624 GLN GLN B . n B 1 207 GLN 207 625 625 GLN GLN B . n B 1 208 HIS 208 626 626 HIS HIS B . n B 1 209 MET 209 627 627 MET MET B . n B 1 210 PRO 210 628 628 PRO PRO B . n B 1 211 TYR 211 629 629 TYR TYR B . n B 1 212 PHE 212 630 630 PHE PHE B . n B 1 213 ARG 213 631 631 ARG ARG B . n B 1 214 LYS 214 632 632 LYS LYS B . n B 1 215 ARG 215 633 633 ARG ARG B . n B 1 216 MET 216 634 634 MET MET B . n B 1 217 VAL 217 635 635 VAL VAL B . n B 1 218 TRP 218 636 636 TRP TRP B . n B 1 219 GLU 219 637 637 GLU GLU B . n B 1 220 ILE 220 638 638 ILE ILE B . n B 1 221 LEU 221 639 639 LEU LEU B . n B 1 222 HIS 222 640 640 HIS HIS B . n B 1 223 ARG 223 641 641 ARG ARG B . n B 1 224 LYS 224 642 642 LYS LYS B . n B 1 225 LEU 225 643 643 LEU LEU B . n B 1 226 LEU 226 644 644 LEU LEU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 2001 2001 HOH HOH A . C 2 HOH 2 2002 2002 HOH HOH A . C 2 HOH 3 2003 2003 HOH HOH A . C 2 HOH 4 2004 2004 HOH HOH A . C 2 HOH 5 2005 2005 HOH HOH A . C 2 HOH 6 2006 2006 HOH HOH A . C 2 HOH 7 2007 2007 HOH HOH A . C 2 HOH 8 2008 2008 HOH HOH A . C 2 HOH 9 2009 2009 HOH HOH A . C 2 HOH 10 2010 2010 HOH HOH A . C 2 HOH 11 2011 2011 HOH HOH A . C 2 HOH 12 2012 2012 HOH HOH A . C 2 HOH 13 2013 2013 HOH HOH A . C 2 HOH 14 2014 2014 HOH HOH A . C 2 HOH 15 2015 2015 HOH HOH A . C 2 HOH 16 2016 2016 HOH HOH A . C 2 HOH 17 2017 2017 HOH HOH A . C 2 HOH 18 2018 2018 HOH HOH A . C 2 HOH 19 2019 2019 HOH HOH A . C 2 HOH 20 2020 2020 HOH HOH A . C 2 HOH 21 2021 2021 HOH HOH A . C 2 HOH 22 2022 2022 HOH HOH A . C 2 HOH 23 2023 2023 HOH HOH A . C 2 HOH 24 2024 2024 HOH HOH A . C 2 HOH 25 2025 2025 HOH HOH A . C 2 HOH 26 2026 2026 HOH HOH A . C 2 HOH 27 2027 2027 HOH HOH A . C 2 HOH 28 2028 2028 HOH HOH A . C 2 HOH 29 2029 2029 HOH HOH A . C 2 HOH 30 2030 2030 HOH HOH A . C 2 HOH 31 2031 2031 HOH HOH A . C 2 HOH 32 2032 2032 HOH HOH A . C 2 HOH 33 2033 2033 HOH HOH A . C 2 HOH 34 2034 2034 HOH HOH A . C 2 HOH 35 2035 2035 HOH HOH A . C 2 HOH 36 2036 2036 HOH HOH A . C 2 HOH 37 2037 2037 HOH HOH A . C 2 HOH 38 2038 2038 HOH HOH A . C 2 HOH 39 2039 2039 HOH HOH A . C 2 HOH 40 2040 2040 HOH HOH A . C 2 HOH 41 2041 2041 HOH HOH A . C 2 HOH 42 2042 2042 HOH HOH A . C 2 HOH 43 2043 2043 HOH HOH A . C 2 HOH 44 2044 2044 HOH HOH A . C 2 HOH 45 2045 2045 HOH HOH A . C 2 HOH 46 2046 2046 HOH HOH A . C 2 HOH 47 2047 2047 HOH HOH A . C 2 HOH 48 2048 2048 HOH HOH A . C 2 HOH 49 2049 2049 HOH HOH A . D 2 HOH 1 2001 2001 HOH HOH B . D 2 HOH 2 2002 2002 HOH HOH B . D 2 HOH 3 2003 2003 HOH HOH B . D 2 HOH 4 2004 2004 HOH HOH B . D 2 HOH 5 2005 2005 HOH HOH B . D 2 HOH 6 2006 2006 HOH HOH B . D 2 HOH 7 2007 2007 HOH HOH B . D 2 HOH 8 2008 2008 HOH HOH B . D 2 HOH 9 2009 2009 HOH HOH B . D 2 HOH 10 2010 2010 HOH HOH B . D 2 HOH 11 2011 2011 HOH HOH B . D 2 HOH 12 2012 2012 HOH HOH B . D 2 HOH 13 2013 2013 HOH HOH B . D 2 HOH 14 2014 2014 HOH HOH B . D 2 HOH 15 2015 2015 HOH HOH B . D 2 HOH 16 2016 2016 HOH HOH B . D 2 HOH 17 2017 2017 HOH HOH B . D 2 HOH 18 2018 2018 HOH HOH B . D 2 HOH 19 2019 2019 HOH HOH B . D 2 HOH 20 2020 2020 HOH HOH B . D 2 HOH 21 2021 2021 HOH HOH B . D 2 HOH 22 2022 2022 HOH HOH B . D 2 HOH 23 2023 2023 HOH HOH B . D 2 HOH 24 2024 2024 HOH HOH B . D 2 HOH 25 2025 2025 HOH HOH B . D 2 HOH 26 2026 2026 HOH HOH B . D 2 HOH 27 2027 2027 HOH HOH B . D 2 HOH 28 2028 2028 HOH HOH B . D 2 HOH 29 2029 2029 HOH HOH B . D 2 HOH 30 2030 2030 HOH HOH B . D 2 HOH 31 2031 2031 HOH HOH B . D 2 HOH 32 2032 2032 HOH HOH B . D 2 HOH 33 2033 2033 HOH HOH B . D 2 HOH 34 2034 2034 HOH HOH B . D 2 HOH 35 2035 2035 HOH HOH B . D 2 HOH 36 2036 2036 HOH HOH B . D 2 HOH 37 2037 2037 HOH HOH B . D 2 HOH 38 2038 2038 HOH HOH B . D 2 HOH 39 2039 2039 HOH HOH B . D 2 HOH 40 2040 2040 HOH HOH B . D 2 HOH 41 2041 2041 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-08-08 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 28.0233 -9.6528 -6.2222 -0.0796 -0.3381 -0.2327 -0.0314 0.1534 -0.0812 5.6773 2.9856 4.1619 0.2597 -1.2397 0.1897 0.2845 -0.3346 0.2642 0.2679 -0.0795 0.2677 -0.1451 -0.0510 -0.2049 'X-RAY DIFFRACTION' 2 ? refined 36.6469 -16.9687 25.0269 -0.0111 -0.1598 -0.0813 -0.1086 0.1726 0.0456 5.6009 6.9026 7.3873 4.0183 -2.0921 -2.6928 -0.2788 -0.0475 -0.6864 -0.5649 -0.0426 -1.1643 -0.2216 0.7850 0.3214 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 419 ? ? A 644 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 419 ? ? B 644 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 AMoRE phasing . ? 4 # _pdbx_entry_details.entry_id 2IYC _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE EXTRA RESIDUE AT POSITION 593 IN CHAINS A AND B IS A KNOWN CONFLICT IN UNIPROT AND IS DESCRIBED IN PUBMED ID: 12477932. ; # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OE1 _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 GLU _pdbx_validate_close_contact.auth_seq_id_1 430 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 NE2 _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 HIS _pdbx_validate_close_contact.auth_seq_id_2 640 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.04 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 OE2 A GLU 430 ? ? 1_555 OE1 B GLU 430 ? ? 3_654 1.31 2 1 NE2 A HIS 640 ? ? 1_555 OE1 B GLU 430 ? ? 3_654 2.15 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CB A GLU 430 ? ? CG A GLU 430 ? ? 1.672 1.517 0.155 0.019 N 2 1 CD A GLU 430 ? ? OE2 A GLU 430 ? ? 1.319 1.252 0.067 0.011 N 3 1 CG B GLU 425 ? ? CD B GLU 425 ? ? 1.612 1.515 0.097 0.015 N 4 1 CB B GLU 430 ? ? CG B GLU 430 ? ? 1.715 1.517 0.198 0.019 N 5 1 CZ B ARG 561 ? ? NH1 B ARG 561 ? ? 1.442 1.326 0.116 0.013 N 6 1 CB B SER 571 ? ? OG B SER 571 ? ? 1.565 1.418 0.147 0.013 N 7 1 CB B SER 588 ? ? OG B SER 588 ? ? 1.515 1.418 0.097 0.013 N 8 1 CD B GLN 592 ? ? NE2 B GLN 592 ? ? 1.486 1.324 0.162 0.025 N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CA _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 GLU _pdbx_validate_rmsd_angle.auth_seq_id_1 430 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CB _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 GLU _pdbx_validate_rmsd_angle.auth_seq_id_2 430 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CG _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 GLU _pdbx_validate_rmsd_angle.auth_seq_id_3 430 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 128.15 _pdbx_validate_rmsd_angle.angle_target_value 113.40 _pdbx_validate_rmsd_angle.angle_deviation 14.75 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.20 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 439 ? ? -32.70 92.53 2 1 ARG A 449 ? ? 84.96 -6.77 3 1 HIS A 462 ? ? 36.22 -126.16 4 1 LEU A 463 ? ? -119.23 54.79 5 1 LYS A 483 ? ? 95.37 -31.01 6 1 TRP A 512 ? ? -59.40 -6.20 7 1 LYS A 515 ? ? 58.64 3.34 8 1 ASN B 439 ? ? -29.22 94.34 9 1 HIS B 462 ? ? 50.56 -141.13 10 1 LEU B 463 ? ? -110.79 55.10 11 1 LYS B 483 ? ? 96.45 -30.97 12 1 LYS B 515 ? ? 62.14 -1.97 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #