data_2IYL # _entry.id 2IYL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.382 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2IYL pdb_00002iyl 10.2210/pdb2iyl/pdb PDBE EBI-29421 ? ? WWPDB D_1290029421 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1OKK unspecified 'A SCARILY SYMMETRIC HOMO-HETERODIMER' PDB 1RJ9 unspecified 'STRUCTURE OF THE HETERODIMER OF THE CONSERVED GTPASEDOMAINS OF THE SIGNAL RECOGNITION PARTICLE (FFH) AND ITSRECEPTOR (FTSY)' PDB 1FTS unspecified 'SIGNAL RECOGNITION PARTICLE RECEPTOR FROM E. COLI' PDB 1ZU4 unspecified 'CRYSTAL STRUCTURE OF FTSY FROM MYCOPLASMA MYCOIDES- SPACEGROUP P21212' PDB 1VMA unspecified 'CRYSTAL STRUCTURE OF CELL DIVISION PROTEIN FTSY (TM0570)FROM THERMOTOGA MARITIMA AT 1. 60 A RESOLUTION' PDB 1NG1 unspecified 'N AND GTPASE DOMAINS OF THE SIGNAL SEQUENCE RECOGNITIONPROTEIN FFH FROM THERMUS AQUATICUS' PDB 2CNW unspecified 'GDPALF4 COMPLEX OF THE SRP GTPASES FFH AND FTSY' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2IYL _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2006-07-18 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Focia, P.J.' 1 ? 'Freymann, D.M.' 2 ? # _citation.id primary _citation.title 'X-ray structure of the T. aquaticus FtsY:GDP complex suggests functional roles for the C-terminal helix of the SRP GTPases.' _citation.journal_abbrev Proteins _citation.journal_volume 66 _citation.page_first 984 _citation.page_last 995 _citation.year 2007 _citation.journal_id_ASTM PSFGEY _citation.country US _citation.journal_id_ISSN 1097-0134 _citation.journal_id_CSD 0867 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17186523 _citation.pdbx_database_id_DOI 10.1002/prot.21200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gawronski-Salerno, J.' 1 ? primary 'Coon 5th., J.S.' 2 ? primary 'Focia, P.J.' 3 ? primary 'Freymann, D.M.' 4 ? # _cell.entry_id 2IYL _cell.length_a 105.196 _cell.length_b 105.196 _cell.length_c 54.500 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2IYL _symmetry.space_group_name_H-M 'I 4' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CELL DIVISION PROTEIN FTSY' 30764.586 1 ? ? 'NGD20, RESIDUES 20-303' ? 2 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 1 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 4 water nat water 18.015 144 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name FTSY # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;AIPWGGNLEEVLEELEMALLAADVGLSATEEILQEVRASGRKDLKEAVKEKLVGMLEPDERRATLRKLGFNPQKPKPVEP KGRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRLSIPVIQGPEGTDPAALAYDAVQAM KARGYDLLFVDTAGRLHTKHNLMEELKKVKRAIAKADPEEPKEVWLVLDAVTGQNGLEQAKKFHEAVGLTGVIVTKLDGT AKGGVLIPIVRTLKVPIKFVGVGEGPDDLQPFDPEAFVEALLED ; _entity_poly.pdbx_seq_one_letter_code_can ;AIPWGGNLEEVLEELEMALLAADVGLSATEEILQEVRASGRKDLKEAVKEKLVGMLEPDERRATLRKLGFNPQKPKPVEP KGRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRLSIPVIQGPEGTDPAALAYDAVQAM KARGYDLLFVDTAGRLHTKHNLMEELKKVKRAIAKADPEEPKEVWLVLDAVTGQNGLEQAKKFHEAVGLTGVIVTKLDGT AKGGVLIPIVRTLKVPIKFVGVGEGPDDLQPFDPEAFVEALLED ; _entity_poly.pdbx_strand_id D _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ILE n 1 3 PRO n 1 4 TRP n 1 5 GLY n 1 6 GLY n 1 7 ASN n 1 8 LEU n 1 9 GLU n 1 10 GLU n 1 11 VAL n 1 12 LEU n 1 13 GLU n 1 14 GLU n 1 15 LEU n 1 16 GLU n 1 17 MET n 1 18 ALA n 1 19 LEU n 1 20 LEU n 1 21 ALA n 1 22 ALA n 1 23 ASP n 1 24 VAL n 1 25 GLY n 1 26 LEU n 1 27 SER n 1 28 ALA n 1 29 THR n 1 30 GLU n 1 31 GLU n 1 32 ILE n 1 33 LEU n 1 34 GLN n 1 35 GLU n 1 36 VAL n 1 37 ARG n 1 38 ALA n 1 39 SER n 1 40 GLY n 1 41 ARG n 1 42 LYS n 1 43 ASP n 1 44 LEU n 1 45 LYS n 1 46 GLU n 1 47 ALA n 1 48 VAL n 1 49 LYS n 1 50 GLU n 1 51 LYS n 1 52 LEU n 1 53 VAL n 1 54 GLY n 1 55 MET n 1 56 LEU n 1 57 GLU n 1 58 PRO n 1 59 ASP n 1 60 GLU n 1 61 ARG n 1 62 ARG n 1 63 ALA n 1 64 THR n 1 65 LEU n 1 66 ARG n 1 67 LYS n 1 68 LEU n 1 69 GLY n 1 70 PHE n 1 71 ASN n 1 72 PRO n 1 73 GLN n 1 74 LYS n 1 75 PRO n 1 76 LYS n 1 77 PRO n 1 78 VAL n 1 79 GLU n 1 80 PRO n 1 81 LYS n 1 82 GLY n 1 83 ARG n 1 84 VAL n 1 85 VAL n 1 86 LEU n 1 87 VAL n 1 88 VAL n 1 89 GLY n 1 90 VAL n 1 91 ASN n 1 92 GLY n 1 93 VAL n 1 94 GLY n 1 95 LYS n 1 96 THR n 1 97 THR n 1 98 THR n 1 99 ILE n 1 100 ALA n 1 101 LYS n 1 102 LEU n 1 103 GLY n 1 104 ARG n 1 105 TYR n 1 106 TYR n 1 107 GLN n 1 108 ASN n 1 109 LEU n 1 110 GLY n 1 111 LYS n 1 112 LYS n 1 113 VAL n 1 114 MET n 1 115 PHE n 1 116 CYS n 1 117 ALA n 1 118 GLY n 1 119 ASP n 1 120 THR n 1 121 PHE n 1 122 ARG n 1 123 ALA n 1 124 ALA n 1 125 GLY n 1 126 GLY n 1 127 THR n 1 128 GLN n 1 129 LEU n 1 130 SER n 1 131 GLU n 1 132 TRP n 1 133 GLY n 1 134 LYS n 1 135 ARG n 1 136 LEU n 1 137 SER n 1 138 ILE n 1 139 PRO n 1 140 VAL n 1 141 ILE n 1 142 GLN n 1 143 GLY n 1 144 PRO n 1 145 GLU n 1 146 GLY n 1 147 THR n 1 148 ASP n 1 149 PRO n 1 150 ALA n 1 151 ALA n 1 152 LEU n 1 153 ALA n 1 154 TYR n 1 155 ASP n 1 156 ALA n 1 157 VAL n 1 158 GLN n 1 159 ALA n 1 160 MET n 1 161 LYS n 1 162 ALA n 1 163 ARG n 1 164 GLY n 1 165 TYR n 1 166 ASP n 1 167 LEU n 1 168 LEU n 1 169 PHE n 1 170 VAL n 1 171 ASP n 1 172 THR n 1 173 ALA n 1 174 GLY n 1 175 ARG n 1 176 LEU n 1 177 HIS n 1 178 THR n 1 179 LYS n 1 180 HIS n 1 181 ASN n 1 182 LEU n 1 183 MET n 1 184 GLU n 1 185 GLU n 1 186 LEU n 1 187 LYS n 1 188 LYS n 1 189 VAL n 1 190 LYS n 1 191 ARG n 1 192 ALA n 1 193 ILE n 1 194 ALA n 1 195 LYS n 1 196 ALA n 1 197 ASP n 1 198 PRO n 1 199 GLU n 1 200 GLU n 1 201 PRO n 1 202 LYS n 1 203 GLU n 1 204 VAL n 1 205 TRP n 1 206 LEU n 1 207 VAL n 1 208 LEU n 1 209 ASP n 1 210 ALA n 1 211 VAL n 1 212 THR n 1 213 GLY n 1 214 GLN n 1 215 ASN n 1 216 GLY n 1 217 LEU n 1 218 GLU n 1 219 GLN n 1 220 ALA n 1 221 LYS n 1 222 LYS n 1 223 PHE n 1 224 HIS n 1 225 GLU n 1 226 ALA n 1 227 VAL n 1 228 GLY n 1 229 LEU n 1 230 THR n 1 231 GLY n 1 232 VAL n 1 233 ILE n 1 234 VAL n 1 235 THR n 1 236 LYS n 1 237 LEU n 1 238 ASP n 1 239 GLY n 1 240 THR n 1 241 ALA n 1 242 LYS n 1 243 GLY n 1 244 GLY n 1 245 VAL n 1 246 LEU n 1 247 ILE n 1 248 PRO n 1 249 ILE n 1 250 VAL n 1 251 ARG n 1 252 THR n 1 253 LEU n 1 254 LYS n 1 255 VAL n 1 256 PRO n 1 257 ILE n 1 258 LYS n 1 259 PHE n 1 260 VAL n 1 261 GLY n 1 262 VAL n 1 263 GLY n 1 264 GLU n 1 265 GLY n 1 266 PRO n 1 267 ASP n 1 268 ASP n 1 269 LEU n 1 270 GLN n 1 271 PRO n 1 272 PHE n 1 273 ASP n 1 274 PRO n 1 275 GLU n 1 276 ALA n 1 277 PHE n 1 278 VAL n 1 279 GLU n 1 280 ALA n 1 281 LEU n 1 282 LEU n 1 283 GLU n 1 284 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'THERMUS AQUATICUS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 271 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant 'ROSETTA-2 pLysS' _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PJGS3 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code FTSY_THEAQ _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P83749 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2IYL _struct_ref_seq.pdbx_strand_id D _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 284 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P83749 _struct_ref_seq.db_align_beg 20 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 303 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 21 _struct_ref_seq.pdbx_auth_seq_align_end 304 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2IYL _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.39 _exptl_crystal.density_percent_sol 48.06 _exptl_crystal.description 'CHAIN D OF ENTRY 1OKK, THE FTSY NG DOMAIN IN ITS HETERODIMERIC COMPLEX WITH FFH NG, WAS USED FOR MOLECULAR REPLACEMENT' # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2004-12-17 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.900 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 14-BM-C' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 14-BM-C _diffrn_source.pdbx_wavelength 0.900 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2IYL _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 48.390 _reflns.d_resolution_high 2.060 _reflns.number_obs 136283 _reflns.number_all ? _reflns.percent_possible_obs 99.4 _reflns.pdbx_Rmerge_I_obs 0.08000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 20.1000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.400 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.06 _reflns_shell.d_res_low 2.17 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.44000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.900 _reflns_shell.pdbx_redundancy 7.70 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2IYL _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 16465 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 11.87 _refine.ls_d_res_high 2.10 _refine.ls_percent_reflns_obs 99.5 _refine.ls_R_factor_obs 0.211 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.207 _refine.ls_R_factor_R_free 0.291 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.200 _refine.ls_number_reflns_R_free 895 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.945 _refine.correlation_coeff_Fo_to_Fc_free 0.878 _refine.B_iso_mean 44.96 _refine.aniso_B[1][1] 0.00000 _refine.aniso_B[2][2] 0.00000 _refine.aniso_B[3][3] -0.01000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. DISORDERED REGIONS WERE OMITTED FROM THE MODEL. THESE INCLUDE RESIDUES 80-82, 95-96, 141-146, AND 235- 236. THREE GLUTAMATE SIDECHAINS, D70, D151, AND D295, EXHIBIT EVIDENCE OF RADIATION DAMAGE AND THEIR CARBOXYLATE GROUP CD- OE1-OE2 ATOMS ARE MODELED AT 0.5 OCCUPANCY. ; _refine.pdbx_starting_model 'PDB ENTRY 1OKK' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.244 _refine.pdbx_overall_ESU_R_Free 0.231 _refine.overall_SU_ML 0.150 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 5.455 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2063 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 38 _refine_hist.number_atoms_solvent 144 _refine_hist.number_atoms_total 2245 _refine_hist.d_res_high 2.10 _refine_hist.d_res_low 11.87 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.014 0.022 ? 2143 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.521 2.019 ? 2901 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.577 5.000 ? 268 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.178 25.244 ? 82 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 17.822 15.000 ? 388 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 11.155 15.000 ? 11 'X-RAY DIFFRACTION' ? r_chiral_restr 0.100 0.200 ? 332 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 1540 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.217 0.200 ? 1035 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.306 0.200 ? 1445 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.177 0.200 ? 145 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.227 0.200 ? 43 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.119 0.200 ? 4 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.069 1.500 ? 1380 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.822 2.000 ? 2155 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 2.202 3.000 ? 860 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 3.594 4.500 ? 746 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.10 _refine_ls_shell.d_res_low 2.15 _refine_ls_shell.number_reflns_R_work 1198 _refine_ls_shell.R_factor_R_work 0.2230 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.2480 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 59 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2IYL _struct.title 'Structure of an FtsY:GDP complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2IYL _struct_keywords.pdbx_keywords 'CELL CYCLE' _struct_keywords.text ;INNER MEMBRANE, RIBONUCLEOPROTEIN, NUCLEOTIDE-BINDING, SIGNAL RECOGNITION PARTICLE, SRP, GDP, FFH, FTSY, GTPASE, RNA-BINDING, GTP-BINDING, CELL DIVISION, MEMBRANE, CELL CYCLE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 7 ? ALA A 22 ? ASN D 27 ALA D 42 1 ? 16 HELX_P HELX_P2 2 GLY A 25 ? SER A 39 ? GLY D 45 SER D 59 1 ? 15 HELX_P HELX_P3 3 ASP A 43 ? GLU A 57 ? ASP D 63 GLU D 77 1 ? 15 HELX_P HELX_P4 4 ALA A 63 ? GLY A 69 ? ALA D 83 GLY D 89 1 ? 7 HELX_P HELX_P5 5 GLY A 94 ? LEU A 109 ? GLY D 114 LEU D 129 1 ? 16 HELX_P HELX_P6 6 THR A 127 ? SER A 137 ? THR D 147 SER D 157 1 ? 11 HELX_P HELX_P7 7 ASP A 148 ? ARG A 163 ? ASP D 168 ARG D 183 1 ? 16 HELX_P HELX_P8 8 ASN A 181 ? ASP A 197 ? ASN D 201 ASP D 217 1 ? 17 HELX_P HELX_P9 9 LEU A 217 ? GLY A 228 ? LEU D 237 GLY D 248 1 ? 12 HELX_P HELX_P10 10 LYS A 242 ? GLY A 244 ? LYS D 262 GLY D 264 5 ? 3 HELX_P HELX_P11 11 VAL A 245 ? LYS A 254 ? VAL D 265 LYS D 274 1 ? 10 HELX_P HELX_P12 12 ASP A 273 ? LEU A 282 ? ASP D 293 LEU D 302 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLU _struct_mon_prot_cis.label_seq_id 200 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLU _struct_mon_prot_cis.auth_seq_id 220 _struct_mon_prot_cis.auth_asym_id D _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 201 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 221 _struct_mon_prot_cis.pdbx_auth_asym_id_2 D _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -2.83 # _struct_sheet.id DA _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense DA 1 2 ? parallel DA 2 3 ? parallel DA 3 4 ? parallel DA 4 5 ? parallel DA 5 6 ? parallel DA 6 7 ? parallel DA 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id DA 1 VAL A 140 ? ILE A 141 ? VAL D 160 ILE D 161 DA 2 VAL A 113 ? CYS A 116 ? VAL D 133 CYS D 136 DA 3 LEU A 167 ? VAL A 170 ? LEU D 187 VAL D 190 DA 4 VAL A 84 ? VAL A 88 ? VAL D 104 VAL D 108 DA 5 GLU A 203 ? ASP A 209 ? GLU D 223 ASP D 229 DA 6 GLY A 231 ? THR A 235 ? GLY D 251 THR D 255 DA 7 ILE A 257 ? GLY A 261 ? ILE D 277 GLY D 281 DA 8 LEU A 269 ? PRO A 271 ? LEU D 289 PRO D 291 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id DA 1 2 N ILE A 141 ? N ILE D 161 O PHE A 115 ? O PHE D 135 DA 2 3 N MET A 114 ? N MET D 134 O LEU A 167 ? O LEU D 187 DA 3 4 N VAL A 170 ? N VAL D 190 O VAL A 85 ? O VAL D 105 DA 4 5 N LEU A 86 ? N LEU D 106 O GLU A 203 ? O GLU D 223 DA 5 6 N LEU A 206 ? N LEU D 226 O GLY A 231 ? O GLY D 251 DA 6 7 O VAL A 232 ? O VAL D 252 N LYS A 258 ? N LYS D 278 DA 7 8 N VAL A 260 ? N VAL D 280 O GLN A 270 ? O GLN D 290 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE SO4 D1306' AC2 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE SO4 D1307' AC3 Software ? ? ? ? 15 'BINDING SITE FOR RESIDUE GDP D1001' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 ARG A 163 ? ARG D 183 . ? 1_555 ? 2 AC1 2 TYR A 165 ? TYR D 185 . ? 1_555 ? 3 AC2 8 ASN A 91 ? ASN D 111 . ? 1_555 ? 4 AC2 8 GLY A 92 ? GLY D 112 . ? 1_555 ? 5 AC2 8 VAL A 93 ? VAL D 113 . ? 1_555 ? 6 AC2 8 GLY A 94 ? GLY D 114 . ? 1_555 ? 7 AC2 8 LYS A 95 ? LYS D 115 . ? 1_555 ? 8 AC2 8 THR A 96 ? THR D 116 . ? 1_555 ? 9 AC2 8 GDP B . ? GDP D 1001 . ? 1_555 ? 10 AC2 8 HOH E . ? HOH D 2091 . ? 1_555 ? 11 AC3 15 GLY A 92 ? GLY D 112 . ? 1_555 ? 12 AC3 15 VAL A 93 ? VAL D 113 . ? 1_555 ? 13 AC3 15 GLY A 94 ? GLY D 114 . ? 1_555 ? 14 AC3 15 LYS A 95 ? LYS D 115 . ? 1_555 ? 15 AC3 15 THR A 96 ? THR D 116 . ? 1_555 ? 16 AC3 15 THR A 97 ? THR D 117 . ? 1_555 ? 17 AC3 15 LYS A 101 ? LYS D 121 . ? 1_555 ? 18 AC3 15 LYS A 236 ? LYS D 256 . ? 1_555 ? 19 AC3 15 ASP A 238 ? ASP D 258 . ? 1_555 ? 20 AC3 15 GLY A 261 ? GLY D 281 . ? 1_555 ? 21 AC3 15 VAL A 262 ? VAL D 282 . ? 1_555 ? 22 AC3 15 GLY A 263 ? GLY D 283 . ? 1_555 ? 23 AC3 15 GLU A 264 ? GLU D 284 . ? 1_555 ? 24 AC3 15 SO4 D . ? SO4 D 1307 . ? 1_555 ? 25 AC3 15 HOH E . ? HOH D 2051 . ? 1_555 ? # _database_PDB_matrix.entry_id 2IYL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2IYL _atom_sites.fract_transf_matrix[1][1] 0.009506 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009506 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018349 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 21 21 ALA ALA D . n A 1 2 ILE 2 22 22 ILE ILE D . n A 1 3 PRO 3 23 23 PRO PRO D . n A 1 4 TRP 4 24 24 TRP TRP D . n A 1 5 GLY 5 25 25 GLY GLY D . n A 1 6 GLY 6 26 26 GLY GLY D . n A 1 7 ASN 7 27 27 ASN ASN D . n A 1 8 LEU 8 28 28 LEU LEU D . n A 1 9 GLU 9 29 29 GLU GLU D . n A 1 10 GLU 10 30 30 GLU GLU D . n A 1 11 VAL 11 31 31 VAL VAL D . n A 1 12 LEU 12 32 32 LEU LEU D . n A 1 13 GLU 13 33 33 GLU GLU D . n A 1 14 GLU 14 34 34 GLU GLU D . n A 1 15 LEU 15 35 35 LEU LEU D . n A 1 16 GLU 16 36 36 GLU GLU D . n A 1 17 MET 17 37 37 MET MET D . n A 1 18 ALA 18 38 38 ALA ALA D . n A 1 19 LEU 19 39 39 LEU LEU D . n A 1 20 LEU 20 40 40 LEU LEU D . n A 1 21 ALA 21 41 41 ALA ALA D . n A 1 22 ALA 22 42 42 ALA ALA D . n A 1 23 ASP 23 43 43 ASP ASP D . n A 1 24 VAL 24 44 44 VAL VAL D . n A 1 25 GLY 25 45 45 GLY GLY D . n A 1 26 LEU 26 46 46 LEU LEU D . n A 1 27 SER 27 47 47 SER SER D . n A 1 28 ALA 28 48 48 ALA ALA D . n A 1 29 THR 29 49 49 THR THR D . n A 1 30 GLU 30 50 50 GLU GLU D . n A 1 31 GLU 31 51 51 GLU GLU D . n A 1 32 ILE 32 52 52 ILE ILE D . n A 1 33 LEU 33 53 53 LEU LEU D . n A 1 34 GLN 34 54 54 GLN GLN D . n A 1 35 GLU 35 55 55 GLU GLU D . n A 1 36 VAL 36 56 56 VAL VAL D . n A 1 37 ARG 37 57 57 ARG ARG D . n A 1 38 ALA 38 58 58 ALA ALA D . n A 1 39 SER 39 59 59 SER SER D . n A 1 40 GLY 40 60 60 GLY GLY D . n A 1 41 ARG 41 61 61 ARG ARG D . n A 1 42 LYS 42 62 62 LYS LYS D . n A 1 43 ASP 43 63 63 ASP ASP D . n A 1 44 LEU 44 64 64 LEU LEU D . n A 1 45 LYS 45 65 65 LYS LYS D . n A 1 46 GLU 46 66 66 GLU GLU D . n A 1 47 ALA 47 67 67 ALA ALA D . n A 1 48 VAL 48 68 68 VAL VAL D . n A 1 49 LYS 49 69 69 LYS LYS D . n A 1 50 GLU 50 70 70 GLU GLU D . n A 1 51 LYS 51 71 71 LYS LYS D . n A 1 52 LEU 52 72 72 LEU LEU D . n A 1 53 VAL 53 73 73 VAL VAL D . n A 1 54 GLY 54 74 74 GLY GLY D . n A 1 55 MET 55 75 75 MET MET D . n A 1 56 LEU 56 76 76 LEU LEU D . n A 1 57 GLU 57 77 77 GLU GLU D . n A 1 58 PRO 58 78 78 PRO PRO D . n A 1 59 ASP 59 79 79 ASP ASP D . n A 1 60 GLU 60 80 ? ? ? D . n A 1 61 ARG 61 81 ? ? ? D . n A 1 62 ARG 62 82 ? ? ? D . n A 1 63 ALA 63 83 83 ALA ALA D . n A 1 64 THR 64 84 84 THR THR D . n A 1 65 LEU 65 85 85 LEU LEU D . n A 1 66 ARG 66 86 86 ARG ARG D . n A 1 67 LYS 67 87 87 LYS LYS D . n A 1 68 LEU 68 88 88 LEU LEU D . n A 1 69 GLY 69 89 89 GLY GLY D . n A 1 70 PHE 70 90 90 PHE PHE D . n A 1 71 ASN 71 91 91 ASN ASN D . n A 1 72 PRO 72 92 92 PRO PRO D . n A 1 73 GLN 73 93 93 GLN GLN D . n A 1 74 LYS 74 94 94 LYS LYS D . n A 1 75 PRO 75 95 ? ? ? D . n A 1 76 LYS 76 96 ? ? ? D . n A 1 77 PRO 77 97 97 PRO PRO D . n A 1 78 VAL 78 98 98 VAL VAL D . n A 1 79 GLU 79 99 99 GLU GLU D . n A 1 80 PRO 80 100 100 PRO PRO D . n A 1 81 LYS 81 101 101 LYS LYS D . n A 1 82 GLY 82 102 102 GLY GLY D . n A 1 83 ARG 83 103 103 ARG ARG D . n A 1 84 VAL 84 104 104 VAL VAL D . n A 1 85 VAL 85 105 105 VAL VAL D . n A 1 86 LEU 86 106 106 LEU LEU D . n A 1 87 VAL 87 107 107 VAL VAL D . n A 1 88 VAL 88 108 108 VAL VAL D . n A 1 89 GLY 89 109 109 GLY GLY D . n A 1 90 VAL 90 110 110 VAL VAL D . n A 1 91 ASN 91 111 111 ASN ASN D . n A 1 92 GLY 92 112 112 GLY GLY D . n A 1 93 VAL 93 113 113 VAL VAL D . n A 1 94 GLY 94 114 114 GLY GLY D . n A 1 95 LYS 95 115 115 LYS LYS D . n A 1 96 THR 96 116 116 THR THR D . n A 1 97 THR 97 117 117 THR THR D . n A 1 98 THR 98 118 118 THR THR D . n A 1 99 ILE 99 119 119 ILE ILE D . n A 1 100 ALA 100 120 120 ALA ALA D . n A 1 101 LYS 101 121 121 LYS LYS D . n A 1 102 LEU 102 122 122 LEU LEU D . n A 1 103 GLY 103 123 123 GLY GLY D . n A 1 104 ARG 104 124 124 ARG ARG D . n A 1 105 TYR 105 125 125 TYR TYR D . n A 1 106 TYR 106 126 126 TYR TYR D . n A 1 107 GLN 107 127 127 GLN GLN D . n A 1 108 ASN 108 128 128 ASN ASN D . n A 1 109 LEU 109 129 129 LEU LEU D . n A 1 110 GLY 110 130 130 GLY GLY D . n A 1 111 LYS 111 131 131 LYS LYS D . n A 1 112 LYS 112 132 132 LYS LYS D . n A 1 113 VAL 113 133 133 VAL VAL D . n A 1 114 MET 114 134 134 MET MET D . n A 1 115 PHE 115 135 135 PHE PHE D . n A 1 116 CYS 116 136 136 CYS CYS D . n A 1 117 ALA 117 137 137 ALA ALA D . n A 1 118 GLY 118 138 138 GLY GLY D . n A 1 119 ASP 119 139 139 ASP ASP D . n A 1 120 THR 120 140 140 THR THR D . n A 1 121 PHE 121 141 ? ? ? D . n A 1 122 ARG 122 142 ? ? ? D . n A 1 123 ALA 123 143 ? ? ? D . n A 1 124 ALA 124 144 ? ? ? D . n A 1 125 GLY 125 145 ? ? ? D . n A 1 126 GLY 126 146 ? ? ? D . n A 1 127 THR 127 147 147 THR THR D . n A 1 128 GLN 128 148 148 GLN GLN D . n A 1 129 LEU 129 149 149 LEU LEU D . n A 1 130 SER 130 150 150 SER SER D . n A 1 131 GLU 131 151 151 GLU GLU D . n A 1 132 TRP 132 152 152 TRP TRP D . n A 1 133 GLY 133 153 153 GLY GLY D . n A 1 134 LYS 134 154 154 LYS LYS D . n A 1 135 ARG 135 155 155 ARG ARG D . n A 1 136 LEU 136 156 156 LEU LEU D . n A 1 137 SER 137 157 157 SER SER D . n A 1 138 ILE 138 158 158 ILE ILE D . n A 1 139 PRO 139 159 159 PRO PRO D . n A 1 140 VAL 140 160 160 VAL VAL D . n A 1 141 ILE 141 161 161 ILE ILE D . n A 1 142 GLN 142 162 162 GLN GLN D . n A 1 143 GLY 143 163 163 GLY GLY D . n A 1 144 PRO 144 164 164 PRO PRO D . n A 1 145 GLU 145 165 165 GLU GLU D . n A 1 146 GLY 146 166 166 GLY GLY D . n A 1 147 THR 147 167 167 THR THR D . n A 1 148 ASP 148 168 168 ASP ASP D . n A 1 149 PRO 149 169 169 PRO PRO D . n A 1 150 ALA 150 170 170 ALA ALA D . n A 1 151 ALA 151 171 171 ALA ALA D . n A 1 152 LEU 152 172 172 LEU LEU D . n A 1 153 ALA 153 173 173 ALA ALA D . n A 1 154 TYR 154 174 174 TYR TYR D . n A 1 155 ASP 155 175 175 ASP ASP D . n A 1 156 ALA 156 176 176 ALA ALA D . n A 1 157 VAL 157 177 177 VAL VAL D . n A 1 158 GLN 158 178 178 GLN GLN D . n A 1 159 ALA 159 179 179 ALA ALA D . n A 1 160 MET 160 180 180 MET MET D . n A 1 161 LYS 161 181 181 LYS LYS D . n A 1 162 ALA 162 182 182 ALA ALA D . n A 1 163 ARG 163 183 183 ARG ARG D . n A 1 164 GLY 164 184 184 GLY GLY D . n A 1 165 TYR 165 185 185 TYR TYR D . n A 1 166 ASP 166 186 186 ASP ASP D . n A 1 167 LEU 167 187 187 LEU LEU D . n A 1 168 LEU 168 188 188 LEU LEU D . n A 1 169 PHE 169 189 189 PHE PHE D . n A 1 170 VAL 170 190 190 VAL VAL D . n A 1 171 ASP 171 191 191 ASP ASP D . n A 1 172 THR 172 192 192 THR THR D . n A 1 173 ALA 173 193 193 ALA ALA D . n A 1 174 GLY 174 194 194 GLY GLY D . n A 1 175 ARG 175 195 195 ARG ARG D . n A 1 176 LEU 176 196 196 LEU LEU D . n A 1 177 HIS 177 197 197 HIS HIS D . n A 1 178 THR 178 198 198 THR THR D . n A 1 179 LYS 179 199 199 LYS LYS D . n A 1 180 HIS 180 200 200 HIS HIS D . n A 1 181 ASN 181 201 201 ASN ASN D . n A 1 182 LEU 182 202 202 LEU LEU D . n A 1 183 MET 183 203 203 MET MET D . n A 1 184 GLU 184 204 204 GLU GLU D . n A 1 185 GLU 185 205 205 GLU GLU D . n A 1 186 LEU 186 206 206 LEU LEU D . n A 1 187 LYS 187 207 207 LYS LYS D . n A 1 188 LYS 188 208 208 LYS LYS D . n A 1 189 VAL 189 209 209 VAL VAL D . n A 1 190 LYS 190 210 210 LYS LYS D . n A 1 191 ARG 191 211 211 ARG ARG D . n A 1 192 ALA 192 212 212 ALA ALA D . n A 1 193 ILE 193 213 213 ILE ILE D . n A 1 194 ALA 194 214 214 ALA ALA D . n A 1 195 LYS 195 215 215 LYS LYS D . n A 1 196 ALA 196 216 216 ALA ALA D . n A 1 197 ASP 197 217 217 ASP ASP D . n A 1 198 PRO 198 218 218 PRO PRO D . n A 1 199 GLU 199 219 219 GLU GLU D . n A 1 200 GLU 200 220 220 GLU GLU D . n A 1 201 PRO 201 221 221 PRO PRO D . n A 1 202 LYS 202 222 222 LYS LYS D . n A 1 203 GLU 203 223 223 GLU GLU D . n A 1 204 VAL 204 224 224 VAL VAL D . n A 1 205 TRP 205 225 225 TRP TRP D . n A 1 206 LEU 206 226 226 LEU LEU D . n A 1 207 VAL 207 227 227 VAL VAL D . n A 1 208 LEU 208 228 228 LEU LEU D . n A 1 209 ASP 209 229 229 ASP ASP D . n A 1 210 ALA 210 230 230 ALA ALA D . n A 1 211 VAL 211 231 231 VAL VAL D . n A 1 212 THR 212 232 232 THR THR D . n A 1 213 GLY 213 233 233 GLY GLY D . n A 1 214 GLN 214 234 234 GLN GLN D . n A 1 215 ASN 215 235 ? ? ? D . n A 1 216 GLY 216 236 ? ? ? D . n A 1 217 LEU 217 237 237 LEU LEU D . n A 1 218 GLU 218 238 238 GLU GLU D . n A 1 219 GLN 219 239 239 GLN GLN D . n A 1 220 ALA 220 240 240 ALA ALA D . n A 1 221 LYS 221 241 241 LYS LYS D . n A 1 222 LYS 222 242 242 LYS LYS D . n A 1 223 PHE 223 243 243 PHE PHE D . n A 1 224 HIS 224 244 244 HIS HIS D . n A 1 225 GLU 225 245 245 GLU GLU D . n A 1 226 ALA 226 246 246 ALA ALA D . n A 1 227 VAL 227 247 247 VAL VAL D . n A 1 228 GLY 228 248 248 GLY GLY D . n A 1 229 LEU 229 249 249 LEU LEU D . n A 1 230 THR 230 250 250 THR THR D . n A 1 231 GLY 231 251 251 GLY GLY D . n A 1 232 VAL 232 252 252 VAL VAL D . n A 1 233 ILE 233 253 253 ILE ILE D . n A 1 234 VAL 234 254 254 VAL VAL D . n A 1 235 THR 235 255 255 THR THR D . n A 1 236 LYS 236 256 256 LYS LYS D . n A 1 237 LEU 237 257 257 LEU LEU D . n A 1 238 ASP 238 258 258 ASP ASP D . n A 1 239 GLY 239 259 259 GLY GLY D . n A 1 240 THR 240 260 260 THR THR D . n A 1 241 ALA 241 261 261 ALA ALA D . n A 1 242 LYS 242 262 262 LYS LYS D . n A 1 243 GLY 243 263 263 GLY GLY D . n A 1 244 GLY 244 264 264 GLY GLY D . n A 1 245 VAL 245 265 265 VAL VAL D . n A 1 246 LEU 246 266 266 LEU LEU D . n A 1 247 ILE 247 267 267 ILE ILE D . n A 1 248 PRO 248 268 268 PRO PRO D . n A 1 249 ILE 249 269 269 ILE ILE D . n A 1 250 VAL 250 270 270 VAL VAL D . n A 1 251 ARG 251 271 271 ARG ARG D . n A 1 252 THR 252 272 272 THR THR D . n A 1 253 LEU 253 273 273 LEU LEU D . n A 1 254 LYS 254 274 274 LYS LYS D . n A 1 255 VAL 255 275 275 VAL VAL D . n A 1 256 PRO 256 276 276 PRO PRO D . n A 1 257 ILE 257 277 277 ILE ILE D . n A 1 258 LYS 258 278 278 LYS LYS D . n A 1 259 PHE 259 279 279 PHE PHE D . n A 1 260 VAL 260 280 280 VAL VAL D . n A 1 261 GLY 261 281 281 GLY GLY D . n A 1 262 VAL 262 282 282 VAL VAL D . n A 1 263 GLY 263 283 283 GLY GLY D . n A 1 264 GLU 264 284 284 GLU GLU D . n A 1 265 GLY 265 285 285 GLY GLY D . n A 1 266 PRO 266 286 286 PRO PRO D . n A 1 267 ASP 267 287 287 ASP ASP D . n A 1 268 ASP 268 288 288 ASP ASP D . n A 1 269 LEU 269 289 289 LEU LEU D . n A 1 270 GLN 270 290 290 GLN GLN D . n A 1 271 PRO 271 291 291 PRO PRO D . n A 1 272 PHE 272 292 292 PHE PHE D . n A 1 273 ASP 273 293 293 ASP ASP D . n A 1 274 PRO 274 294 294 PRO PRO D . n A 1 275 GLU 275 295 295 GLU GLU D . n A 1 276 ALA 276 296 296 ALA ALA D . n A 1 277 PHE 277 297 297 PHE PHE D . n A 1 278 VAL 278 298 298 VAL VAL D . n A 1 279 GLU 279 299 299 GLU GLU D . n A 1 280 ALA 280 300 300 ALA ALA D . n A 1 281 LEU 281 301 301 LEU LEU D . n A 1 282 LEU 282 302 302 LEU LEU D . n A 1 283 GLU 283 303 303 GLU GLU D . n A 1 284 ASP 284 304 304 ASP ASP D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GDP 1 1001 1001 GDP GDP D . C 3 SO4 1 1306 1306 SO4 SO4 D . D 3 SO4 1 1307 1307 SO4 SO4 D . E 4 HOH 1 2001 2001 HOH HOH D . E 4 HOH 2 2002 2002 HOH HOH D . E 4 HOH 3 2003 2003 HOH HOH D . E 4 HOH 4 2004 2004 HOH HOH D . E 4 HOH 5 2005 2005 HOH HOH D . E 4 HOH 6 2006 2006 HOH HOH D . E 4 HOH 7 2007 2007 HOH HOH D . E 4 HOH 8 2008 2008 HOH HOH D . E 4 HOH 9 2009 2009 HOH HOH D . E 4 HOH 10 2010 2010 HOH HOH D . E 4 HOH 11 2011 2011 HOH HOH D . E 4 HOH 12 2012 2012 HOH HOH D . E 4 HOH 13 2013 2013 HOH HOH D . E 4 HOH 14 2014 2014 HOH HOH D . E 4 HOH 15 2015 2015 HOH HOH D . E 4 HOH 16 2016 2016 HOH HOH D . E 4 HOH 17 2017 2017 HOH HOH D . E 4 HOH 18 2018 2018 HOH HOH D . E 4 HOH 19 2019 2019 HOH HOH D . E 4 HOH 20 2020 2020 HOH HOH D . E 4 HOH 21 2021 2021 HOH HOH D . E 4 HOH 22 2022 2022 HOH HOH D . E 4 HOH 23 2023 2023 HOH HOH D . E 4 HOH 24 2024 2024 HOH HOH D . E 4 HOH 25 2025 2025 HOH HOH D . E 4 HOH 26 2026 2026 HOH HOH D . E 4 HOH 27 2027 2027 HOH HOH D . E 4 HOH 28 2028 2028 HOH HOH D . E 4 HOH 29 2029 2029 HOH HOH D . E 4 HOH 30 2030 2030 HOH HOH D . E 4 HOH 31 2031 2031 HOH HOH D . E 4 HOH 32 2032 2032 HOH HOH D . E 4 HOH 33 2033 2033 HOH HOH D . E 4 HOH 34 2034 2034 HOH HOH D . E 4 HOH 35 2035 2035 HOH HOH D . E 4 HOH 36 2036 2036 HOH HOH D . E 4 HOH 37 2037 2037 HOH HOH D . E 4 HOH 38 2038 2038 HOH HOH D . E 4 HOH 39 2039 2039 HOH HOH D . E 4 HOH 40 2040 2040 HOH HOH D . E 4 HOH 41 2041 2041 HOH HOH D . E 4 HOH 42 2042 2042 HOH HOH D . E 4 HOH 43 2043 2043 HOH HOH D . E 4 HOH 44 2044 2044 HOH HOH D . E 4 HOH 45 2045 2045 HOH HOH D . E 4 HOH 46 2046 2046 HOH HOH D . E 4 HOH 47 2047 2047 HOH HOH D . E 4 HOH 48 2048 2048 HOH HOH D . E 4 HOH 49 2049 2049 HOH HOH D . E 4 HOH 50 2050 2050 HOH HOH D . E 4 HOH 51 2051 2051 HOH HOH D . E 4 HOH 52 2052 2052 HOH HOH D . E 4 HOH 53 2053 2053 HOH HOH D . E 4 HOH 54 2054 2054 HOH HOH D . E 4 HOH 55 2055 2055 HOH HOH D . E 4 HOH 56 2056 2056 HOH HOH D . E 4 HOH 57 2057 2057 HOH HOH D . E 4 HOH 58 2058 2058 HOH HOH D . E 4 HOH 59 2059 2059 HOH HOH D . E 4 HOH 60 2060 2060 HOH HOH D . E 4 HOH 61 2061 2061 HOH HOH D . E 4 HOH 62 2062 2062 HOH HOH D . E 4 HOH 63 2063 2063 HOH HOH D . E 4 HOH 64 2064 2064 HOH HOH D . E 4 HOH 65 2065 2065 HOH HOH D . E 4 HOH 66 2066 2066 HOH HOH D . E 4 HOH 67 2067 2067 HOH HOH D . E 4 HOH 68 2068 2068 HOH HOH D . E 4 HOH 69 2069 2069 HOH HOH D . E 4 HOH 70 2070 2070 HOH HOH D . E 4 HOH 71 2071 2071 HOH HOH D . E 4 HOH 72 2072 2072 HOH HOH D . E 4 HOH 73 2073 2073 HOH HOH D . E 4 HOH 74 2074 2074 HOH HOH D . E 4 HOH 75 2075 2075 HOH HOH D . E 4 HOH 76 2076 2076 HOH HOH D . E 4 HOH 77 2077 2077 HOH HOH D . E 4 HOH 78 2078 2078 HOH HOH D . E 4 HOH 79 2079 2079 HOH HOH D . E 4 HOH 80 2080 2080 HOH HOH D . E 4 HOH 81 2081 2081 HOH HOH D . E 4 HOH 82 2082 2082 HOH HOH D . E 4 HOH 83 2083 2083 HOH HOH D . E 4 HOH 84 2084 2084 HOH HOH D . E 4 HOH 85 2085 2085 HOH HOH D . E 4 HOH 86 2086 2086 HOH HOH D . E 4 HOH 87 2087 2087 HOH HOH D . E 4 HOH 88 2088 2088 HOH HOH D . E 4 HOH 89 2089 2089 HOH HOH D . E 4 HOH 90 2090 2090 HOH HOH D . E 4 HOH 91 2091 2091 HOH HOH D . E 4 HOH 92 2092 2092 HOH HOH D . E 4 HOH 93 2093 2093 HOH HOH D . E 4 HOH 94 2094 2094 HOH HOH D . E 4 HOH 95 2095 2095 HOH HOH D . E 4 HOH 96 2096 2096 HOH HOH D . E 4 HOH 97 2097 2097 HOH HOH D . E 4 HOH 98 2098 2098 HOH HOH D . E 4 HOH 99 2099 2099 HOH HOH D . E 4 HOH 100 2100 2100 HOH HOH D . E 4 HOH 101 2101 2101 HOH HOH D . E 4 HOH 102 2102 2102 HOH HOH D . E 4 HOH 103 2103 2103 HOH HOH D . E 4 HOH 104 2104 2104 HOH HOH D . E 4 HOH 105 2105 2105 HOH HOH D . E 4 HOH 106 2106 2106 HOH HOH D . E 4 HOH 107 2107 2107 HOH HOH D . E 4 HOH 108 2108 2108 HOH HOH D . E 4 HOH 109 2109 2109 HOH HOH D . E 4 HOH 110 2110 2110 HOH HOH D . E 4 HOH 111 2111 2111 HOH HOH D . E 4 HOH 112 2112 2112 HOH HOH D . E 4 HOH 113 2113 2113 HOH HOH D . E 4 HOH 114 2114 2114 HOH HOH D . E 4 HOH 115 2115 2115 HOH HOH D . E 4 HOH 116 2116 2116 HOH HOH D . E 4 HOH 117 2117 2117 HOH HOH D . E 4 HOH 118 2118 2118 HOH HOH D . E 4 HOH 119 2119 2119 HOH HOH D . E 4 HOH 120 2120 2120 HOH HOH D . E 4 HOH 121 2121 2121 HOH HOH D . E 4 HOH 122 2122 2122 HOH HOH D . E 4 HOH 123 2123 2123 HOH HOH D . E 4 HOH 124 2124 2124 HOH HOH D . E 4 HOH 125 2125 2125 HOH HOH D . E 4 HOH 126 2126 2126 HOH HOH D . E 4 HOH 127 2127 2127 HOH HOH D . E 4 HOH 128 2128 2128 HOH HOH D . E 4 HOH 129 2129 2129 HOH HOH D . E 4 HOH 130 2130 2130 HOH HOH D . E 4 HOH 131 2131 2131 HOH HOH D . E 4 HOH 132 2132 2132 HOH HOH D . E 4 HOH 133 2133 2133 HOH HOH D . E 4 HOH 134 2134 2134 HOH HOH D . E 4 HOH 135 2135 2135 HOH HOH D . E 4 HOH 136 2136 2136 HOH HOH D . E 4 HOH 137 2137 2137 HOH HOH D . E 4 HOH 138 2138 2138 HOH HOH D . E 4 HOH 139 2139 2139 HOH HOH D . E 4 HOH 140 2140 2140 HOH HOH D . E 4 HOH 141 2141 2141 HOH HOH D . E 4 HOH 142 2142 2142 HOH HOH D . E 4 HOH 143 2143 2143 HOH HOH D . E 4 HOH 144 2144 2144 HOH HOH D . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-01-02 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 2 0 2018-12-19 5 'Structure model' 2 1 2023-12-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Source and taxonomy' 8 5 'Structure model' 'Data collection' 9 5 'Structure model' 'Database references' 10 5 'Structure model' Other 11 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' citation 3 4 'Structure model' citation_author 4 4 'Structure model' entity_src_gen 5 4 'Structure model' struct_conn 6 5 'Structure model' chem_comp_atom 7 5 'Structure model' chem_comp_bond 8 5 'Structure model' database_2 9 5 'Structure model' pdbx_database_status 10 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.label_alt_id' 2 4 'Structure model' '_citation.journal_id_ISSN' 3 4 'Structure model' '_citation.page_last' 4 4 'Structure model' '_citation.pdbx_database_id_DOI' 5 4 'Structure model' '_citation.title' 6 4 'Structure model' '_citation_author.name' 7 4 'Structure model' '_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id' 8 4 'Structure model' '_entity_src_gen.pdbx_host_org_scientific_name' 9 4 'Structure model' '_entity_src_gen.pdbx_host_org_strain' 10 4 'Structure model' '_entity_src_gen.pdbx_host_org_variant' 11 5 'Structure model' '_database_2.pdbx_DOI' 12 5 'Structure model' '_database_2.pdbx_database_accession' 13 5 'Structure model' '_pdbx_database_status.status_code_sf' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0005 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 PHASER phasing . ? 4 # _pdbx_entry_details.entry_id 2IYL _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;RESIDUES 2-20 DELETED IN THE FTSY NG DOMAIN EXPRESSION CONSTRUCT FTSY NGD20. MET 1 NOT PRESENT. ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 D _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 2028 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 D _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 2086 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.15 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU D 77 ? ? -118.22 64.57 2 1 GLU D 165 ? ? -31.86 126.52 3 1 ASP D 288 ? ? -87.15 47.14 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 D GLU 80 ? A GLU 60 2 1 Y 1 D ARG 81 ? A ARG 61 3 1 Y 1 D ARG 82 ? A ARG 62 4 1 Y 1 D PRO 95 ? A PRO 75 5 1 Y 1 D LYS 96 ? A LYS 76 6 1 Y 1 D PHE 141 ? A PHE 121 7 1 Y 1 D ARG 142 ? A ARG 122 8 1 Y 1 D ALA 143 ? A ALA 123 9 1 Y 1 D ALA 144 ? A ALA 124 10 1 Y 1 D GLY 145 ? A GLY 125 11 1 Y 1 D GLY 146 ? A GLY 126 12 1 Y 1 D ASN 235 ? A ASN 215 13 1 Y 1 D GLY 236 ? A GLY 216 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GDP PB P N N 88 GDP O1B O N N 89 GDP O2B O N N 90 GDP O3B O N N 91 GDP O3A O N N 92 GDP PA P N N 93 GDP O1A O N N 94 GDP O2A O N N 95 GDP "O5'" O N N 96 GDP "C5'" C N N 97 GDP "C4'" C N R 98 GDP "O4'" O N N 99 GDP "C3'" C N S 100 GDP "O3'" O N N 101 GDP "C2'" C N R 102 GDP "O2'" O N N 103 GDP "C1'" C N R 104 GDP N9 N Y N 105 GDP C8 C Y N 106 GDP N7 N Y N 107 GDP C5 C Y N 108 GDP C6 C N N 109 GDP O6 O N N 110 GDP N1 N N N 111 GDP C2 C N N 112 GDP N2 N N N 113 GDP N3 N N N 114 GDP C4 C Y N 115 GDP HOB2 H N N 116 GDP HOB3 H N N 117 GDP HOA2 H N N 118 GDP "H5'" H N N 119 GDP "H5''" H N N 120 GDP "H4'" H N N 121 GDP "H3'" H N N 122 GDP "HO3'" H N N 123 GDP "H2'" H N N 124 GDP "HO2'" H N N 125 GDP "H1'" H N N 126 GDP H8 H N N 127 GDP HN1 H N N 128 GDP HN21 H N N 129 GDP HN22 H N N 130 GLN N N N N 131 GLN CA C N S 132 GLN C C N N 133 GLN O O N N 134 GLN CB C N N 135 GLN CG C N N 136 GLN CD C N N 137 GLN OE1 O N N 138 GLN NE2 N N N 139 GLN OXT O N N 140 GLN H H N N 141 GLN H2 H N N 142 GLN HA H N N 143 GLN HB2 H N N 144 GLN HB3 H N N 145 GLN HG2 H N N 146 GLN HG3 H N N 147 GLN HE21 H N N 148 GLN HE22 H N N 149 GLN HXT H N N 150 GLU N N N N 151 GLU CA C N S 152 GLU C C N N 153 GLU O O N N 154 GLU CB C N N 155 GLU CG C N N 156 GLU CD C N N 157 GLU OE1 O N N 158 GLU OE2 O N N 159 GLU OXT O N N 160 GLU H H N N 161 GLU H2 H N N 162 GLU HA H N N 163 GLU HB2 H N N 164 GLU HB3 H N N 165 GLU HG2 H N N 166 GLU HG3 H N N 167 GLU HE2 H N N 168 GLU HXT H N N 169 GLY N N N N 170 GLY CA C N N 171 GLY C C N N 172 GLY O O N N 173 GLY OXT O N N 174 GLY H H N N 175 GLY H2 H N N 176 GLY HA2 H N N 177 GLY HA3 H N N 178 GLY HXT H N N 179 HIS N N N N 180 HIS CA C N S 181 HIS C C N N 182 HIS O O N N 183 HIS CB C N N 184 HIS CG C Y N 185 HIS ND1 N Y N 186 HIS CD2 C Y N 187 HIS CE1 C Y N 188 HIS NE2 N Y N 189 HIS OXT O N N 190 HIS H H N N 191 HIS H2 H N N 192 HIS HA H N N 193 HIS HB2 H N N 194 HIS HB3 H N N 195 HIS HD1 H N N 196 HIS HD2 H N N 197 HIS HE1 H N N 198 HIS HE2 H N N 199 HIS HXT H N N 200 HOH O O N N 201 HOH H1 H N N 202 HOH H2 H N N 203 ILE N N N N 204 ILE CA C N S 205 ILE C C N N 206 ILE O O N N 207 ILE CB C N S 208 ILE CG1 C N N 209 ILE CG2 C N N 210 ILE CD1 C N N 211 ILE OXT O N N 212 ILE H H N N 213 ILE H2 H N N 214 ILE HA H N N 215 ILE HB H N N 216 ILE HG12 H N N 217 ILE HG13 H N N 218 ILE HG21 H N N 219 ILE HG22 H N N 220 ILE HG23 H N N 221 ILE HD11 H N N 222 ILE HD12 H N N 223 ILE HD13 H N N 224 ILE HXT H N N 225 LEU N N N N 226 LEU CA C N S 227 LEU C C N N 228 LEU O O N N 229 LEU CB C N N 230 LEU CG C N N 231 LEU CD1 C N N 232 LEU CD2 C N N 233 LEU OXT O N N 234 LEU H H N N 235 LEU H2 H N N 236 LEU HA H N N 237 LEU HB2 H N N 238 LEU HB3 H N N 239 LEU HG H N N 240 LEU HD11 H N N 241 LEU HD12 H N N 242 LEU HD13 H N N 243 LEU HD21 H N N 244 LEU HD22 H N N 245 LEU HD23 H N N 246 LEU HXT H N N 247 LYS N N N N 248 LYS CA C N S 249 LYS C C N N 250 LYS O O N N 251 LYS CB C N N 252 LYS CG C N N 253 LYS CD C N N 254 LYS CE C N N 255 LYS NZ N N N 256 LYS OXT O N N 257 LYS H H N N 258 LYS H2 H N N 259 LYS HA H N N 260 LYS HB2 H N N 261 LYS HB3 H N N 262 LYS HG2 H N N 263 LYS HG3 H N N 264 LYS HD2 H N N 265 LYS HD3 H N N 266 LYS HE2 H N N 267 LYS HE3 H N N 268 LYS HZ1 H N N 269 LYS HZ2 H N N 270 LYS HZ3 H N N 271 LYS HXT H N N 272 MET N N N N 273 MET CA C N S 274 MET C C N N 275 MET O O N N 276 MET CB C N N 277 MET CG C N N 278 MET SD S N N 279 MET CE C N N 280 MET OXT O N N 281 MET H H N N 282 MET H2 H N N 283 MET HA H N N 284 MET HB2 H N N 285 MET HB3 H N N 286 MET HG2 H N N 287 MET HG3 H N N 288 MET HE1 H N N 289 MET HE2 H N N 290 MET HE3 H N N 291 MET HXT H N N 292 PHE N N N N 293 PHE CA C N S 294 PHE C C N N 295 PHE O O N N 296 PHE CB C N N 297 PHE CG C Y N 298 PHE CD1 C Y N 299 PHE CD2 C Y N 300 PHE CE1 C Y N 301 PHE CE2 C Y N 302 PHE CZ C Y N 303 PHE OXT O N N 304 PHE H H N N 305 PHE H2 H N N 306 PHE HA H N N 307 PHE HB2 H N N 308 PHE HB3 H N N 309 PHE HD1 H N N 310 PHE HD2 H N N 311 PHE HE1 H N N 312 PHE HE2 H N N 313 PHE HZ H N N 314 PHE HXT H N N 315 PRO N N N N 316 PRO CA C N S 317 PRO C C N N 318 PRO O O N N 319 PRO CB C N N 320 PRO CG C N N 321 PRO CD C N N 322 PRO OXT O N N 323 PRO H H N N 324 PRO HA H N N 325 PRO HB2 H N N 326 PRO HB3 H N N 327 PRO HG2 H N N 328 PRO HG3 H N N 329 PRO HD2 H N N 330 PRO HD3 H N N 331 PRO HXT H N N 332 SER N N N N 333 SER CA C N S 334 SER C C N N 335 SER O O N N 336 SER CB C N N 337 SER OG O N N 338 SER OXT O N N 339 SER H H N N 340 SER H2 H N N 341 SER HA H N N 342 SER HB2 H N N 343 SER HB3 H N N 344 SER HG H N N 345 SER HXT H N N 346 SO4 S S N N 347 SO4 O1 O N N 348 SO4 O2 O N N 349 SO4 O3 O N N 350 SO4 O4 O N N 351 THR N N N N 352 THR CA C N S 353 THR C C N N 354 THR O O N N 355 THR CB C N R 356 THR OG1 O N N 357 THR CG2 C N N 358 THR OXT O N N 359 THR H H N N 360 THR H2 H N N 361 THR HA H N N 362 THR HB H N N 363 THR HG1 H N N 364 THR HG21 H N N 365 THR HG22 H N N 366 THR HG23 H N N 367 THR HXT H N N 368 TRP N N N N 369 TRP CA C N S 370 TRP C C N N 371 TRP O O N N 372 TRP CB C N N 373 TRP CG C Y N 374 TRP CD1 C Y N 375 TRP CD2 C Y N 376 TRP NE1 N Y N 377 TRP CE2 C Y N 378 TRP CE3 C Y N 379 TRP CZ2 C Y N 380 TRP CZ3 C Y N 381 TRP CH2 C Y N 382 TRP OXT O N N 383 TRP H H N N 384 TRP H2 H N N 385 TRP HA H N N 386 TRP HB2 H N N 387 TRP HB3 H N N 388 TRP HD1 H N N 389 TRP HE1 H N N 390 TRP HE3 H N N 391 TRP HZ2 H N N 392 TRP HZ3 H N N 393 TRP HH2 H N N 394 TRP HXT H N N 395 TYR N N N N 396 TYR CA C N S 397 TYR C C N N 398 TYR O O N N 399 TYR CB C N N 400 TYR CG C Y N 401 TYR CD1 C Y N 402 TYR CD2 C Y N 403 TYR CE1 C Y N 404 TYR CE2 C Y N 405 TYR CZ C Y N 406 TYR OH O N N 407 TYR OXT O N N 408 TYR H H N N 409 TYR H2 H N N 410 TYR HA H N N 411 TYR HB2 H N N 412 TYR HB3 H N N 413 TYR HD1 H N N 414 TYR HD2 H N N 415 TYR HE1 H N N 416 TYR HE2 H N N 417 TYR HH H N N 418 TYR HXT H N N 419 VAL N N N N 420 VAL CA C N S 421 VAL C C N N 422 VAL O O N N 423 VAL CB C N N 424 VAL CG1 C N N 425 VAL CG2 C N N 426 VAL OXT O N N 427 VAL H H N N 428 VAL H2 H N N 429 VAL HA H N N 430 VAL HB H N N 431 VAL HG11 H N N 432 VAL HG12 H N N 433 VAL HG13 H N N 434 VAL HG21 H N N 435 VAL HG22 H N N 436 VAL HG23 H N N 437 VAL HXT H N N 438 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GDP PB O1B doub N N 83 GDP PB O2B sing N N 84 GDP PB O3B sing N N 85 GDP PB O3A sing N N 86 GDP O2B HOB2 sing N N 87 GDP O3B HOB3 sing N N 88 GDP O3A PA sing N N 89 GDP PA O1A doub N N 90 GDP PA O2A sing N N 91 GDP PA "O5'" sing N N 92 GDP O2A HOA2 sing N N 93 GDP "O5'" "C5'" sing N N 94 GDP "C5'" "C4'" sing N N 95 GDP "C5'" "H5'" sing N N 96 GDP "C5'" "H5''" sing N N 97 GDP "C4'" "O4'" sing N N 98 GDP "C4'" "C3'" sing N N 99 GDP "C4'" "H4'" sing N N 100 GDP "O4'" "C1'" sing N N 101 GDP "C3'" "O3'" sing N N 102 GDP "C3'" "C2'" sing N N 103 GDP "C3'" "H3'" sing N N 104 GDP "O3'" "HO3'" sing N N 105 GDP "C2'" "O2'" sing N N 106 GDP "C2'" "C1'" sing N N 107 GDP "C2'" "H2'" sing N N 108 GDP "O2'" "HO2'" sing N N 109 GDP "C1'" N9 sing N N 110 GDP "C1'" "H1'" sing N N 111 GDP N9 C8 sing Y N 112 GDP N9 C4 sing Y N 113 GDP C8 N7 doub Y N 114 GDP C8 H8 sing N N 115 GDP N7 C5 sing Y N 116 GDP C5 C6 sing N N 117 GDP C5 C4 doub Y N 118 GDP C6 O6 doub N N 119 GDP C6 N1 sing N N 120 GDP N1 C2 sing N N 121 GDP N1 HN1 sing N N 122 GDP C2 N2 sing N N 123 GDP C2 N3 doub N N 124 GDP N2 HN21 sing N N 125 GDP N2 HN22 sing N N 126 GDP N3 C4 sing N N 127 GLN N CA sing N N 128 GLN N H sing N N 129 GLN N H2 sing N N 130 GLN CA C sing N N 131 GLN CA CB sing N N 132 GLN CA HA sing N N 133 GLN C O doub N N 134 GLN C OXT sing N N 135 GLN CB CG sing N N 136 GLN CB HB2 sing N N 137 GLN CB HB3 sing N N 138 GLN CG CD sing N N 139 GLN CG HG2 sing N N 140 GLN CG HG3 sing N N 141 GLN CD OE1 doub N N 142 GLN CD NE2 sing N N 143 GLN NE2 HE21 sing N N 144 GLN NE2 HE22 sing N N 145 GLN OXT HXT sing N N 146 GLU N CA sing N N 147 GLU N H sing N N 148 GLU N H2 sing N N 149 GLU CA C sing N N 150 GLU CA CB sing N N 151 GLU CA HA sing N N 152 GLU C O doub N N 153 GLU C OXT sing N N 154 GLU CB CG sing N N 155 GLU CB HB2 sing N N 156 GLU CB HB3 sing N N 157 GLU CG CD sing N N 158 GLU CG HG2 sing N N 159 GLU CG HG3 sing N N 160 GLU CD OE1 doub N N 161 GLU CD OE2 sing N N 162 GLU OE2 HE2 sing N N 163 GLU OXT HXT sing N N 164 GLY N CA sing N N 165 GLY N H sing N N 166 GLY N H2 sing N N 167 GLY CA C sing N N 168 GLY CA HA2 sing N N 169 GLY CA HA3 sing N N 170 GLY C O doub N N 171 GLY C OXT sing N N 172 GLY OXT HXT sing N N 173 HIS N CA sing N N 174 HIS N H sing N N 175 HIS N H2 sing N N 176 HIS CA C sing N N 177 HIS CA CB sing N N 178 HIS CA HA sing N N 179 HIS C O doub N N 180 HIS C OXT sing N N 181 HIS CB CG sing N N 182 HIS CB HB2 sing N N 183 HIS CB HB3 sing N N 184 HIS CG ND1 sing Y N 185 HIS CG CD2 doub Y N 186 HIS ND1 CE1 doub Y N 187 HIS ND1 HD1 sing N N 188 HIS CD2 NE2 sing Y N 189 HIS CD2 HD2 sing N N 190 HIS CE1 NE2 sing Y N 191 HIS CE1 HE1 sing N N 192 HIS NE2 HE2 sing N N 193 HIS OXT HXT sing N N 194 HOH O H1 sing N N 195 HOH O H2 sing N N 196 ILE N CA sing N N 197 ILE N H sing N N 198 ILE N H2 sing N N 199 ILE CA C sing N N 200 ILE CA CB sing N N 201 ILE CA HA sing N N 202 ILE C O doub N N 203 ILE C OXT sing N N 204 ILE CB CG1 sing N N 205 ILE CB CG2 sing N N 206 ILE CB HB sing N N 207 ILE CG1 CD1 sing N N 208 ILE CG1 HG12 sing N N 209 ILE CG1 HG13 sing N N 210 ILE CG2 HG21 sing N N 211 ILE CG2 HG22 sing N N 212 ILE CG2 HG23 sing N N 213 ILE CD1 HD11 sing N N 214 ILE CD1 HD12 sing N N 215 ILE CD1 HD13 sing N N 216 ILE OXT HXT sing N N 217 LEU N CA sing N N 218 LEU N H sing N N 219 LEU N H2 sing N N 220 LEU CA C sing N N 221 LEU CA CB sing N N 222 LEU CA HA sing N N 223 LEU C O doub N N 224 LEU C OXT sing N N 225 LEU CB CG sing N N 226 LEU CB HB2 sing N N 227 LEU CB HB3 sing N N 228 LEU CG CD1 sing N N 229 LEU CG CD2 sing N N 230 LEU CG HG sing N N 231 LEU CD1 HD11 sing N N 232 LEU CD1 HD12 sing N N 233 LEU CD1 HD13 sing N N 234 LEU CD2 HD21 sing N N 235 LEU CD2 HD22 sing N N 236 LEU CD2 HD23 sing N N 237 LEU OXT HXT sing N N 238 LYS N CA sing N N 239 LYS N H sing N N 240 LYS N H2 sing N N 241 LYS CA C sing N N 242 LYS CA CB sing N N 243 LYS CA HA sing N N 244 LYS C O doub N N 245 LYS C OXT sing N N 246 LYS CB CG sing N N 247 LYS CB HB2 sing N N 248 LYS CB HB3 sing N N 249 LYS CG CD sing N N 250 LYS CG HG2 sing N N 251 LYS CG HG3 sing N N 252 LYS CD CE sing N N 253 LYS CD HD2 sing N N 254 LYS CD HD3 sing N N 255 LYS CE NZ sing N N 256 LYS CE HE2 sing N N 257 LYS CE HE3 sing N N 258 LYS NZ HZ1 sing N N 259 LYS NZ HZ2 sing N N 260 LYS NZ HZ3 sing N N 261 LYS OXT HXT sing N N 262 MET N CA sing N N 263 MET N H sing N N 264 MET N H2 sing N N 265 MET CA C sing N N 266 MET CA CB sing N N 267 MET CA HA sing N N 268 MET C O doub N N 269 MET C OXT sing N N 270 MET CB CG sing N N 271 MET CB HB2 sing N N 272 MET CB HB3 sing N N 273 MET CG SD sing N N 274 MET CG HG2 sing N N 275 MET CG HG3 sing N N 276 MET SD CE sing N N 277 MET CE HE1 sing N N 278 MET CE HE2 sing N N 279 MET CE HE3 sing N N 280 MET OXT HXT sing N N 281 PHE N CA sing N N 282 PHE N H sing N N 283 PHE N H2 sing N N 284 PHE CA C sing N N 285 PHE CA CB sing N N 286 PHE CA HA sing N N 287 PHE C O doub N N 288 PHE C OXT sing N N 289 PHE CB CG sing N N 290 PHE CB HB2 sing N N 291 PHE CB HB3 sing N N 292 PHE CG CD1 doub Y N 293 PHE CG CD2 sing Y N 294 PHE CD1 CE1 sing Y N 295 PHE CD1 HD1 sing N N 296 PHE CD2 CE2 doub Y N 297 PHE CD2 HD2 sing N N 298 PHE CE1 CZ doub Y N 299 PHE CE1 HE1 sing N N 300 PHE CE2 CZ sing Y N 301 PHE CE2 HE2 sing N N 302 PHE CZ HZ sing N N 303 PHE OXT HXT sing N N 304 PRO N CA sing N N 305 PRO N CD sing N N 306 PRO N H sing N N 307 PRO CA C sing N N 308 PRO CA CB sing N N 309 PRO CA HA sing N N 310 PRO C O doub N N 311 PRO C OXT sing N N 312 PRO CB CG sing N N 313 PRO CB HB2 sing N N 314 PRO CB HB3 sing N N 315 PRO CG CD sing N N 316 PRO CG HG2 sing N N 317 PRO CG HG3 sing N N 318 PRO CD HD2 sing N N 319 PRO CD HD3 sing N N 320 PRO OXT HXT sing N N 321 SER N CA sing N N 322 SER N H sing N N 323 SER N H2 sing N N 324 SER CA C sing N N 325 SER CA CB sing N N 326 SER CA HA sing N N 327 SER C O doub N N 328 SER C OXT sing N N 329 SER CB OG sing N N 330 SER CB HB2 sing N N 331 SER CB HB3 sing N N 332 SER OG HG sing N N 333 SER OXT HXT sing N N 334 SO4 S O1 doub N N 335 SO4 S O2 doub N N 336 SO4 S O3 sing N N 337 SO4 S O4 sing N N 338 THR N CA sing N N 339 THR N H sing N N 340 THR N H2 sing N N 341 THR CA C sing N N 342 THR CA CB sing N N 343 THR CA HA sing N N 344 THR C O doub N N 345 THR C OXT sing N N 346 THR CB OG1 sing N N 347 THR CB CG2 sing N N 348 THR CB HB sing N N 349 THR OG1 HG1 sing N N 350 THR CG2 HG21 sing N N 351 THR CG2 HG22 sing N N 352 THR CG2 HG23 sing N N 353 THR OXT HXT sing N N 354 TRP N CA sing N N 355 TRP N H sing N N 356 TRP N H2 sing N N 357 TRP CA C sing N N 358 TRP CA CB sing N N 359 TRP CA HA sing N N 360 TRP C O doub N N 361 TRP C OXT sing N N 362 TRP CB CG sing N N 363 TRP CB HB2 sing N N 364 TRP CB HB3 sing N N 365 TRP CG CD1 doub Y N 366 TRP CG CD2 sing Y N 367 TRP CD1 NE1 sing Y N 368 TRP CD1 HD1 sing N N 369 TRP CD2 CE2 doub Y N 370 TRP CD2 CE3 sing Y N 371 TRP NE1 CE2 sing Y N 372 TRP NE1 HE1 sing N N 373 TRP CE2 CZ2 sing Y N 374 TRP CE3 CZ3 doub Y N 375 TRP CE3 HE3 sing N N 376 TRP CZ2 CH2 doub Y N 377 TRP CZ2 HZ2 sing N N 378 TRP CZ3 CH2 sing Y N 379 TRP CZ3 HZ3 sing N N 380 TRP CH2 HH2 sing N N 381 TRP OXT HXT sing N N 382 TYR N CA sing N N 383 TYR N H sing N N 384 TYR N H2 sing N N 385 TYR CA C sing N N 386 TYR CA CB sing N N 387 TYR CA HA sing N N 388 TYR C O doub N N 389 TYR C OXT sing N N 390 TYR CB CG sing N N 391 TYR CB HB2 sing N N 392 TYR CB HB3 sing N N 393 TYR CG CD1 doub Y N 394 TYR CG CD2 sing Y N 395 TYR CD1 CE1 sing Y N 396 TYR CD1 HD1 sing N N 397 TYR CD2 CE2 doub Y N 398 TYR CD2 HD2 sing N N 399 TYR CE1 CZ doub Y N 400 TYR CE1 HE1 sing N N 401 TYR CE2 CZ sing Y N 402 TYR CE2 HE2 sing N N 403 TYR CZ OH sing N N 404 TYR OH HH sing N N 405 TYR OXT HXT sing N N 406 VAL N CA sing N N 407 VAL N H sing N N 408 VAL N H2 sing N N 409 VAL CA C sing N N 410 VAL CA CB sing N N 411 VAL CA HA sing N N 412 VAL C O doub N N 413 VAL C OXT sing N N 414 VAL CB CG1 sing N N 415 VAL CB CG2 sing N N 416 VAL CB HB sing N N 417 VAL CG1 HG11 sing N N 418 VAL CG1 HG12 sing N N 419 VAL CG1 HG13 sing N N 420 VAL CG2 HG21 sing N N 421 VAL CG2 HG22 sing N N 422 VAL CG2 HG23 sing N N 423 VAL OXT HXT sing N N 424 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "GUANOSINE-5'-DIPHOSPHATE" GDP 3 'SULFATE ION' SO4 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1OKK _pdbx_initial_refinement_model.details 'PDB ENTRY 1OKK' #