data_2IZX # _entry.id 2IZX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2IZX PDBE EBI-29512 WWPDB D_1290029512 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2IZX _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2006-07-27 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Gold, M.G.' 1 'Lygren, B.' 2 'Dokurno, P.' 3 'Hoshi, N.' 4 'McConnachie, G.' 5 'Tasken, K.' 6 'Carlson, C.R.' 7 'Scott, J.D.' 8 'Barford, D.' 9 # _citation.id primary _citation.title 'Molecular Basis of Akap Specificity for Pka Regulatory Subunits.' _citation.journal_abbrev Mol.Cell _citation.journal_volume 24 _citation.page_first 383 _citation.page_last ? _citation.year 2006 _citation.journal_id_ASTM MOCEFL _citation.country US _citation.journal_id_ISSN 1097-2765 _citation.journal_id_CSD 2168 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17081989 _citation.pdbx_database_id_DOI 10.1016/J.MOLCEL.2006.09.006 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Gold, M.G.' 1 primary 'Lygren, B.' 2 primary 'Dokurno, P.' 3 primary 'Hoshi, N.' 4 primary 'Mcconnachie, G.' 5 primary 'Tasken, K.' 6 primary 'Carlson, C.R.' 7 primary 'Scott, J.D.' 8 primary 'Barford, D.' 9 # _cell.entry_id 2IZX _cell.length_a 41.352 _cell.length_b 45.251 _cell.length_c 56.837 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2IZX _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CAMP-DEPENDENT PROTEIN KINASE TYPE II-ALPHA REGULATORY SUBUNIT' 4790.473 2 2.7.11.11 ? 3-43 ? 2 polymer syn AKAP-IS 2075.364 1 ? ? ? ? 3 non-polymer syn 'DITHIANE DIOL' 152.235 2 ? ? ? ? 4 water nat water 18.015 99 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'CAMP-DEPENDENT PROTEIN KINASE REGULATORY SUBUNIT II' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no IQIPPGLTELLQGYTVEVLRQQPPDLVEFAVEYFTRLREAR IQIPPGLTELLQGYTVEVLRQQPPDLVEFAVEYFTRLREAR A,B ? 2 'polypeptide(L)' no no QIEYLAKQIVDNAIQQAK QIEYLAKQIVDNAIQQAK C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ILE n 1 2 GLN n 1 3 ILE n 1 4 PRO n 1 5 PRO n 1 6 GLY n 1 7 LEU n 1 8 THR n 1 9 GLU n 1 10 LEU n 1 11 LEU n 1 12 GLN n 1 13 GLY n 1 14 TYR n 1 15 THR n 1 16 VAL n 1 17 GLU n 1 18 VAL n 1 19 LEU n 1 20 ARG n 1 21 GLN n 1 22 GLN n 1 23 PRO n 1 24 PRO n 1 25 ASP n 1 26 LEU n 1 27 VAL n 1 28 GLU n 1 29 PHE n 1 30 ALA n 1 31 VAL n 1 32 GLU n 1 33 TYR n 1 34 PHE n 1 35 THR n 1 36 ARG n 1 37 LEU n 1 38 ARG n 1 39 GLU n 1 40 ALA n 1 41 ARG n 2 1 GLN n 2 2 ILE n 2 3 GLU n 2 4 TYR n 2 5 LEU n 2 6 ALA n 2 7 LYS n 2 8 GLN n 2 9 ILE n 2 10 VAL n 2 11 ASP n 2 12 ASN n 2 13 ALA n 2 14 ILE n 2 15 GLN n 2 16 GLN n 2 17 ALA n 2 18 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PGEX6P1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'SYNTHETIC CONSTRUCT' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP KAP2_HUMAN 1 ? ? P13861 ? 2 PDB 2IZX 2 ? ? 2IZX ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2IZX A 1 ? 41 ? P13861 3 ? 43 ? 3 43 2 1 2IZX B 1 ? 41 ? P13861 3 ? 43 ? 3 43 3 2 2IZX C 1 ? 18 ? 2IZX 4 ? 21 ? 4 21 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DTD non-polymer . 'DITHIANE DIOL' ? 'C4 H8 O2 S2' 152.235 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2IZX _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.36 _exptl_crystal.density_percent_sol 47.9 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.50 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '1 M TRI-SODIUM CITRATE, 0.1 M TRIS-HCL PH 7.5' # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2005-07-05 _diffrn_detector.details 'CYLINDRICAL GRAZING INCIDENCE MIRROR' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SILICON FILTER' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.970 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID29' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID29 _diffrn_source.pdbx_wavelength 0.970 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2IZX _reflns.observed_criterion_sigma_I 2.500 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 35.400 _reflns.d_resolution_high 1.300 _reflns.number_obs 26863 _reflns.number_all ? _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.06000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 16.0000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.350 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.30 _reflns_shell.d_res_low 1.37 _reflns_shell.percent_possible_all 99.8 _reflns_shell.Rmerge_I_obs 0.34000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.500 _reflns_shell.pdbx_redundancy 2.90 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2IZX _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 25468 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 28.42 _refine.ls_d_res_high 1.30 _refine.ls_percent_reflns_obs 99.7 _refine.ls_R_factor_obs 0.166 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.164 _refine.ls_R_factor_R_free 0.194 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 1348 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.966 _refine.correlation_coeff_Fo_to_Fc_free 0.956 _refine.B_iso_mean 15.24 _refine.aniso_B[1][1] -0.11000 _refine.aniso_B[2][2] 0.11000 _refine.aniso_B[3][3] -0.01000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.Q4 IN AKAP-IS IS MODELLED AS ALANINE' _refine.pdbx_starting_model 'RII APO CRYSTAL STRUCTURE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.050 _refine.pdbx_overall_ESU_R_Free 0.049 _refine.overall_SU_ML 0.028 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 1.469 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 800 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 16 _refine_hist.number_atoms_solvent 99 _refine_hist.number_atoms_total 915 _refine_hist.d_res_high 1.30 _refine_hist.d_res_low 28.42 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.018 0.022 ? 828 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.805 2.013 ? 1122 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 3.787 5.000 ? 95 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 32.064 24.048 ? 42 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.012 15.000 ? 140 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 9.621 15.000 ? 8 'X-RAY DIFFRACTION' ? r_chiral_restr 0.144 0.200 ? 132 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.010 0.020 ? 620 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.278 0.200 ? 464 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.324 0.200 ? 593 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.209 0.200 ? 68 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.166 0.200 ? 24 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.107 0.200 ? 15 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2.167 1.500 ? 509 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.706 2.000 ? 800 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 3.927 3.000 ? 356 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 5.582 4.500 ? 322 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.30 _refine_ls_shell.d_res_low 1.33 _refine_ls_shell.number_reflns_R_work 1845 _refine_ls_shell.R_factor_R_work 0.3160 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.3530 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 105 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2IZX _struct.title 'Molecular Basis of AKAP Specificity for PKA Regulatory Subunits' _struct.pdbx_descriptor 'CAMP-DEPENDENT PROTEIN KINASE TYPE II-ALPHA REGULATORY SUBUNIT (E.C.2.7.11.11), AKAP-IS' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2IZX _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'CAMP-BINDING, PHOSPHORYLATION, NUCLEOTIDE-BINDING, PKA, CAMP, AKAP, ANCHOR, KINASE, ACETYLATION, TRANSFERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 4 ? G N N 4 ? H N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 6 ? GLN A 22 ? GLY A 8 GLN A 24 1 ? 17 HELX_P HELX_P2 2 ASP A 25 ? ARG A 41 ? ASP A 27 ARG A 43 1 ? 17 HELX_P HELX_P3 3 GLY B 6 ? GLN B 22 ? GLY B 8 GLN B 24 1 ? 17 HELX_P HELX_P4 4 ASP B 25 ? ALA B 40 ? ASP B 27 ALA B 42 1 ? 16 HELX_P HELX_P5 5 GLN C 1 ? LYS C 18 ? GLN C 4 LYS C 21 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE DTD A 1044' AC2 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE DTD A 1045' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 GLN A 21 ? GLN A 23 . ? 1_555 ? 2 AC1 8 PHE A 29 ? PHE A 31 . ? 1_555 ? 3 AC1 8 GLU A 32 ? GLU A 34 . ? 1_555 ? 4 AC1 8 TYR A 33 ? TYR A 35 . ? 1_555 ? 5 AC1 8 ARG A 36 ? ARG A 38 . ? 1_555 ? 6 AC1 8 DTD E . ? DTD A 1045 . ? 1_555 ? 7 AC1 8 HOH F . ? HOH A 2037 . ? 1_555 ? 8 AC1 8 GLN B 21 ? GLN B 23 . ? 3_544 ? 9 AC2 7 ARG A 36 ? ARG A 38 . ? 1_555 ? 10 AC2 7 LEU A 37 ? LEU A 39 . ? 1_555 ? 11 AC2 7 DTD D . ? DTD A 1044 . ? 1_555 ? 12 AC2 7 HOH F . ? HOH A 2038 . ? 1_555 ? 13 AC2 7 HOH F . ? HOH A 2039 . ? 1_555 ? 14 AC2 7 GLN B 21 ? GLN B 23 . ? 3_544 ? 15 AC2 7 ARG B 36 ? ARG B 38 . ? 3_544 ? # _database_PDB_matrix.entry_id 2IZX _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2IZX _atom_sites.fract_transf_matrix[1][1] 0.024183 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022099 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017594 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ILE 1 3 ? ? ? A . n A 1 2 GLN 2 4 ? ? ? A . n A 1 3 ILE 3 5 5 ILE ILE A . n A 1 4 PRO 4 6 6 PRO PRO A . n A 1 5 PRO 5 7 7 PRO PRO A . n A 1 6 GLY 6 8 8 GLY GLY A . n A 1 7 LEU 7 9 9 LEU LEU A . n A 1 8 THR 8 10 10 THR THR A . n A 1 9 GLU 9 11 11 GLU GLU A . n A 1 10 LEU 10 12 12 LEU LEU A . n A 1 11 LEU 11 13 13 LEU LEU A . n A 1 12 GLN 12 14 14 GLN GLN A . n A 1 13 GLY 13 15 15 GLY GLY A . n A 1 14 TYR 14 16 16 TYR TYR A . n A 1 15 THR 15 17 17 THR THR A . n A 1 16 VAL 16 18 18 VAL VAL A . n A 1 17 GLU 17 19 19 GLU GLU A . n A 1 18 VAL 18 20 20 VAL VAL A . n A 1 19 LEU 19 21 21 LEU LEU A . n A 1 20 ARG 20 22 22 ARG ARG A . n A 1 21 GLN 21 23 23 GLN GLN A . n A 1 22 GLN 22 24 24 GLN GLN A . n A 1 23 PRO 23 25 25 PRO PRO A . n A 1 24 PRO 24 26 26 PRO PRO A . n A 1 25 ASP 25 27 27 ASP ASP A . n A 1 26 LEU 26 28 28 LEU LEU A . n A 1 27 VAL 27 29 29 VAL VAL A . n A 1 28 GLU 28 30 30 GLU GLU A . n A 1 29 PHE 29 31 31 PHE PHE A . n A 1 30 ALA 30 32 32 ALA ALA A . n A 1 31 VAL 31 33 33 VAL VAL A . n A 1 32 GLU 32 34 34 GLU GLU A . n A 1 33 TYR 33 35 35 TYR TYR A . n A 1 34 PHE 34 36 36 PHE PHE A . n A 1 35 THR 35 37 37 THR THR A . n A 1 36 ARG 36 38 38 ARG ARG A . n A 1 37 LEU 37 39 39 LEU LEU A . n A 1 38 ARG 38 40 40 ARG ARG A . n A 1 39 GLU 39 41 41 GLU GLU A . n A 1 40 ALA 40 42 42 ALA ALA A . n A 1 41 ARG 41 43 43 ARG ARG A . n B 1 1 ILE 1 3 3 ILE ILE B . n B 1 2 GLN 2 4 4 GLN GLN B . n B 1 3 ILE 3 5 5 ILE ILE B . n B 1 4 PRO 4 6 6 PRO PRO B . n B 1 5 PRO 5 7 7 PRO PRO B . n B 1 6 GLY 6 8 8 GLY GLY B . n B 1 7 LEU 7 9 9 LEU LEU B . n B 1 8 THR 8 10 10 THR THR B . n B 1 9 GLU 9 11 11 GLU GLU B . n B 1 10 LEU 10 12 12 LEU LEU B . n B 1 11 LEU 11 13 13 LEU LEU B . n B 1 12 GLN 12 14 14 GLN GLN B . n B 1 13 GLY 13 15 15 GLY GLY B . n B 1 14 TYR 14 16 16 TYR TYR B . n B 1 15 THR 15 17 17 THR THR B . n B 1 16 VAL 16 18 18 VAL VAL B . n B 1 17 GLU 17 19 19 GLU GLU B . n B 1 18 VAL 18 20 20 VAL VAL B . n B 1 19 LEU 19 21 21 LEU LEU B . n B 1 20 ARG 20 22 22 ARG ARG B . n B 1 21 GLN 21 23 23 GLN GLN B . n B 1 22 GLN 22 24 24 GLN GLN B . n B 1 23 PRO 23 25 25 PRO PRO B . n B 1 24 PRO 24 26 26 PRO PRO B . n B 1 25 ASP 25 27 27 ASP ASP B . n B 1 26 LEU 26 28 28 LEU LEU B . n B 1 27 VAL 27 29 29 VAL VAL B . n B 1 28 GLU 28 30 30 GLU GLU B . n B 1 29 PHE 29 31 31 PHE PHE B . n B 1 30 ALA 30 32 32 ALA ALA B . n B 1 31 VAL 31 33 33 VAL VAL B . n B 1 32 GLU 32 34 34 GLU GLU B . n B 1 33 TYR 33 35 35 TYR TYR B . n B 1 34 PHE 34 36 36 PHE PHE B . n B 1 35 THR 35 37 37 THR THR B . n B 1 36 ARG 36 38 38 ARG ARG B . n B 1 37 LEU 37 39 39 LEU LEU B . n B 1 38 ARG 38 40 40 ARG ARG B . n B 1 39 GLU 39 41 41 GLU GLU B . n B 1 40 ALA 40 42 42 ALA ALA B . n B 1 41 ARG 41 43 43 ARG ARG B . n C 2 1 GLN 1 4 4 GLN GLN C . n C 2 2 ILE 2 5 5 ILE ILE C . n C 2 3 GLU 3 6 6 GLU GLU C . n C 2 4 TYR 4 7 7 TYR TYR C . n C 2 5 LEU 5 8 8 LEU LEU C . n C 2 6 ALA 6 9 9 ALA ALA C . n C 2 7 LYS 7 10 10 LYS LYS C . n C 2 8 GLN 8 11 11 GLN GLN C . n C 2 9 ILE 9 12 12 ILE ILE C . n C 2 10 VAL 10 13 13 VAL VAL C . n C 2 11 ASP 11 14 14 ASP ASP C . n C 2 12 ASN 12 15 15 ASN ASN C . n C 2 13 ALA 13 16 16 ALA ALA C . n C 2 14 ILE 14 17 17 ILE ILE C . n C 2 15 GLN 15 18 18 GLN GLN C . n C 2 16 GLN 16 19 19 GLN GLN C . n C 2 17 ALA 17 20 20 ALA ALA C . n C 2 18 LYS 18 21 21 LYS LYS C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 DTD 1 1044 1044 DTD DTD A . E 3 DTD 1 1045 1045 DTD DTD A . F 4 HOH 1 2001 2001 HOH HOH A . F 4 HOH 2 2002 2002 HOH HOH A . F 4 HOH 3 2003 2003 HOH HOH A . F 4 HOH 4 2004 2004 HOH HOH A . F 4 HOH 5 2005 2005 HOH HOH A . F 4 HOH 6 2006 2006 HOH HOH A . F 4 HOH 7 2007 2007 HOH HOH A . F 4 HOH 8 2008 2008 HOH HOH A . F 4 HOH 9 2009 2009 HOH HOH A . F 4 HOH 10 2010 2010 HOH HOH A . F 4 HOH 11 2011 2011 HOH HOH A . F 4 HOH 12 2012 2012 HOH HOH A . F 4 HOH 13 2013 2013 HOH HOH A . F 4 HOH 14 2014 2014 HOH HOH A . F 4 HOH 15 2015 2015 HOH HOH A . F 4 HOH 16 2016 2016 HOH HOH A . F 4 HOH 17 2017 2017 HOH HOH A . F 4 HOH 18 2018 2018 HOH HOH A . F 4 HOH 19 2019 2019 HOH HOH A . F 4 HOH 20 2020 2020 HOH HOH A . F 4 HOH 21 2021 2021 HOH HOH A . F 4 HOH 22 2022 2022 HOH HOH A . F 4 HOH 23 2023 2023 HOH HOH A . F 4 HOH 24 2024 2024 HOH HOH A . F 4 HOH 25 2025 2025 HOH HOH A . F 4 HOH 26 2026 2026 HOH HOH A . F 4 HOH 27 2027 2027 HOH HOH A . F 4 HOH 28 2028 2028 HOH HOH A . F 4 HOH 29 2029 2029 HOH HOH A . F 4 HOH 30 2030 2030 HOH HOH A . F 4 HOH 31 2031 2031 HOH HOH A . F 4 HOH 32 2032 2032 HOH HOH A . F 4 HOH 33 2033 2033 HOH HOH A . F 4 HOH 34 2034 2034 HOH HOH A . F 4 HOH 35 2035 2035 HOH HOH A . F 4 HOH 36 2036 2036 HOH HOH A . F 4 HOH 37 2037 2037 HOH HOH A . F 4 HOH 38 2038 2038 HOH HOH A . F 4 HOH 39 2039 2039 HOH HOH A . G 4 HOH 1 2001 2001 HOH HOH B . G 4 HOH 2 2002 2002 HOH HOH B . G 4 HOH 3 2003 2003 HOH HOH B . G 4 HOH 4 2004 2004 HOH HOH B . G 4 HOH 5 2005 2005 HOH HOH B . G 4 HOH 6 2006 2006 HOH HOH B . G 4 HOH 7 2007 2007 HOH HOH B . G 4 HOH 8 2008 2008 HOH HOH B . G 4 HOH 9 2009 2009 HOH HOH B . G 4 HOH 10 2010 2010 HOH HOH B . G 4 HOH 11 2011 2011 HOH HOH B . G 4 HOH 12 2012 2012 HOH HOH B . G 4 HOH 13 2013 2013 HOH HOH B . G 4 HOH 14 2014 2014 HOH HOH B . G 4 HOH 15 2015 2015 HOH HOH B . G 4 HOH 16 2016 2016 HOH HOH B . G 4 HOH 17 2017 2017 HOH HOH B . G 4 HOH 18 2018 2018 HOH HOH B . G 4 HOH 19 2019 2019 HOH HOH B . G 4 HOH 20 2020 2020 HOH HOH B . G 4 HOH 21 2021 2021 HOH HOH B . G 4 HOH 22 2022 2022 HOH HOH B . G 4 HOH 23 2023 2023 HOH HOH B . G 4 HOH 24 2024 2024 HOH HOH B . G 4 HOH 25 2025 2025 HOH HOH B . G 4 HOH 26 2026 2026 HOH HOH B . G 4 HOH 27 2027 2027 HOH HOH B . G 4 HOH 28 2028 2028 HOH HOH B . G 4 HOH 29 2029 2029 HOH HOH B . G 4 HOH 30 2030 2030 HOH HOH B . G 4 HOH 31 2031 2031 HOH HOH B . G 4 HOH 32 2032 2032 HOH HOH B . G 4 HOH 33 2033 2033 HOH HOH B . G 4 HOH 34 2034 2034 HOH HOH B . G 4 HOH 35 2035 2035 HOH HOH B . G 4 HOH 36 2036 2036 HOH HOH B . G 4 HOH 37 2037 2037 HOH HOH B . G 4 HOH 38 2038 2038 HOH HOH B . G 4 HOH 39 2039 2039 HOH HOH B . G 4 HOH 40 2040 2040 HOH HOH B . G 4 HOH 41 2041 2041 HOH HOH B . G 4 HOH 42 2042 2042 HOH HOH B . G 4 HOH 43 2043 2043 HOH HOH B . G 4 HOH 44 2044 2044 HOH HOH B . G 4 HOH 45 2045 2045 HOH HOH B . G 4 HOH 46 2046 2046 HOH HOH B . H 4 HOH 1 2001 2001 HOH HOH C . H 4 HOH 2 2002 2002 HOH HOH C . H 4 HOH 3 2003 2003 HOH HOH C . H 4 HOH 4 2004 2004 HOH HOH C . H 4 HOH 5 2005 2005 HOH HOH C . H 4 HOH 6 2006 2006 HOH HOH C . H 4 HOH 7 2007 2007 HOH HOH C . H 4 HOH 8 2008 2008 HOH HOH C . H 4 HOH 9 2009 2009 HOH HOH C . H 4 HOH 10 2010 2010 HOH HOH C . H 4 HOH 11 2011 2011 HOH HOH C . H 4 HOH 12 2012 2012 HOH HOH C . H 4 HOH 13 2013 2013 HOH HOH C . H 4 HOH 14 2014 2014 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-11-08 2 'Structure model' 1 1 2017-02-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Derived calculations' 2 2 'Structure model' 'Non-polymer description' 3 2 'Structure model' Other 4 2 'Structure model' 'Source and taxonomy' 5 2 'Structure model' 'Structure summary' 6 2 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 PHASER phasing . ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OE2 A GLU 41 ? ? O A HOH 2032 ? ? 2.15 2 1 N A ILE 5 ? ? O A HOH 2002 ? ? 2.18 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 C GLN 4 ? CG ? C GLN 1 CG 2 1 Y 1 C GLN 4 ? CD ? C GLN 1 CD 3 1 Y 1 C GLN 4 ? OE1 ? C GLN 1 OE1 4 1 Y 1 C GLN 4 ? NE2 ? C GLN 1 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ILE 3 ? A ILE 1 2 1 Y 1 A GLN 4 ? A GLN 2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'DITHIANE DIOL' DTD 4 water HOH #