data_2JK8 # _entry.id 2JK8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.382 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2JK8 pdb_00002jk8 10.2210/pdb2jk8/pdb PDBE EBI-36929 ? ? WWPDB D_1290036929 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2VY3 unspecified 'TYPE IV SECRETION SYSTEM EFFECTOR PROTEIN BEPA' PDB 2VZA unspecified 'TYPE IV SECRETION SYSTEM EFFECTOR PROTEIN BEPA' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2JK8 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2008-08-22 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Palanivelu, D.V.' 1 'Schirmer, T.' 2 # _citation.id primary _citation.title 'Fic Domain Catalyzed Adenylylation: Insight Provided by the Structural Analysis of the Type Iv Secretion System Effector Bepa.' _citation.journal_abbrev 'Protein Sci.' _citation.journal_volume 20 _citation.page_first 492 _citation.page_last ? _citation.year 2011 _citation.journal_id_ASTM PRCIEI _citation.country US _citation.journal_id_ISSN 0961-8368 _citation.journal_id_CSD 0795 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21213248 _citation.pdbx_database_id_DOI 10.1002/PRO.581 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Palanivelu, D.V.' 1 ? primary 'Goepfert, A.' 2 ? primary 'Meury, M.' 3 ? primary 'Guye, P.' 4 ? primary 'Dehio, C.' 5 ? primary 'Schirmer, T.' 6 ? # _cell.entry_id 2JK8 _cell.length_a 72.948 _cell.length_b 82.877 _cell.length_c 126.729 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2JK8 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PUTATIVE CELL FILAMENTATION PROTEIN (BEPA PROTEIN)' 34382.156 2 ? ? 'RESIDUES 1-302' 'N-TERMINAL (HIS)6-TAG WITH THROMBIN CLEAVAGE SITE' 2 non-polymer syn 'NICKEL (II) ION' 58.693 4 ? ? ? ? 3 non-polymer syn "ADENOSINE-5'-TRIPHOSPHATE" 507.181 1 ? ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 5 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 6 water nat water 18.015 7 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name BEPA # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MPKAKAKTKNTEIISPHHYVYPNTTTLKNKYGIKNLNAFLEKCSHDTAKAMINLREESLPEYFDTAYLCHIHQQLFKNTF EWAGYLRHIPFTFADGTTAAMPEMKRTGWKNAFAIGDEIQEGLQRLDQTLAEKNNLQGLTREEFNSEAIELFNSLNQLHP FREGNGRTQRLFFENLAKAAGHQLNFSLITKERMMVASVAVAENGDLEPMQHLFEDISNPEKIRLLKEFMHTMKNTGRNV NDRPVMVAKEGETYTGTYRGAGLEGFALNVKGAYIIGNIDHLPPEQLKILKPGDKITFTAPK ; _entity_poly.pdbx_seq_one_letter_code_can ;MPKAKAKTKNTEIISPHHYVYPNTTTLKNKYGIKNLNAFLEKCSHDTAKAMINLREESLPEYFDTAYLCHIHQQLFKNTF EWAGYLRHIPFTFADGTTAAMPEMKRTGWKNAFAIGDEIQEGLQRLDQTLAEKNNLQGLTREEFNSEAIELFNSLNQLHP FREGNGRTQRLFFENLAKAAGHQLNFSLITKERMMVASVAVAENGDLEPMQHLFEDISNPEKIRLLKEFMHTMKNTGRNV NDRPVMVAKEGETYTGTYRGAGLEGFALNVKGAYIIGNIDHLPPEQLKILKPGDKITFTAPK ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 PRO n 1 3 LYS n 1 4 ALA n 1 5 LYS n 1 6 ALA n 1 7 LYS n 1 8 THR n 1 9 LYS n 1 10 ASN n 1 11 THR n 1 12 GLU n 1 13 ILE n 1 14 ILE n 1 15 SER n 1 16 PRO n 1 17 HIS n 1 18 HIS n 1 19 TYR n 1 20 VAL n 1 21 TYR n 1 22 PRO n 1 23 ASN n 1 24 THR n 1 25 THR n 1 26 THR n 1 27 LEU n 1 28 LYS n 1 29 ASN n 1 30 LYS n 1 31 TYR n 1 32 GLY n 1 33 ILE n 1 34 LYS n 1 35 ASN n 1 36 LEU n 1 37 ASN n 1 38 ALA n 1 39 PHE n 1 40 LEU n 1 41 GLU n 1 42 LYS n 1 43 CYS n 1 44 SER n 1 45 HIS n 1 46 ASP n 1 47 THR n 1 48 ALA n 1 49 LYS n 1 50 ALA n 1 51 MET n 1 52 ILE n 1 53 ASN n 1 54 LEU n 1 55 ARG n 1 56 GLU n 1 57 GLU n 1 58 SER n 1 59 LEU n 1 60 PRO n 1 61 GLU n 1 62 TYR n 1 63 PHE n 1 64 ASP n 1 65 THR n 1 66 ALA n 1 67 TYR n 1 68 LEU n 1 69 CYS n 1 70 HIS n 1 71 ILE n 1 72 HIS n 1 73 GLN n 1 74 GLN n 1 75 LEU n 1 76 PHE n 1 77 LYS n 1 78 ASN n 1 79 THR n 1 80 PHE n 1 81 GLU n 1 82 TRP n 1 83 ALA n 1 84 GLY n 1 85 TYR n 1 86 LEU n 1 87 ARG n 1 88 HIS n 1 89 ILE n 1 90 PRO n 1 91 PHE n 1 92 THR n 1 93 PHE n 1 94 ALA n 1 95 ASP n 1 96 GLY n 1 97 THR n 1 98 THR n 1 99 ALA n 1 100 ALA n 1 101 MET n 1 102 PRO n 1 103 GLU n 1 104 MET n 1 105 LYS n 1 106 ARG n 1 107 THR n 1 108 GLY n 1 109 TRP n 1 110 LYS n 1 111 ASN n 1 112 ALA n 1 113 PHE n 1 114 ALA n 1 115 ILE n 1 116 GLY n 1 117 ASP n 1 118 GLU n 1 119 ILE n 1 120 GLN n 1 121 GLU n 1 122 GLY n 1 123 LEU n 1 124 GLN n 1 125 ARG n 1 126 LEU n 1 127 ASP n 1 128 GLN n 1 129 THR n 1 130 LEU n 1 131 ALA n 1 132 GLU n 1 133 LYS n 1 134 ASN n 1 135 ASN n 1 136 LEU n 1 137 GLN n 1 138 GLY n 1 139 LEU n 1 140 THR n 1 141 ARG n 1 142 GLU n 1 143 GLU n 1 144 PHE n 1 145 ASN n 1 146 SER n 1 147 GLU n 1 148 ALA n 1 149 ILE n 1 150 GLU n 1 151 LEU n 1 152 PHE n 1 153 ASN n 1 154 SER n 1 155 LEU n 1 156 ASN n 1 157 GLN n 1 158 LEU n 1 159 HIS n 1 160 PRO n 1 161 PHE n 1 162 ARG n 1 163 GLU n 1 164 GLY n 1 165 ASN n 1 166 GLY n 1 167 ARG n 1 168 THR n 1 169 GLN n 1 170 ARG n 1 171 LEU n 1 172 PHE n 1 173 PHE n 1 174 GLU n 1 175 ASN n 1 176 LEU n 1 177 ALA n 1 178 LYS n 1 179 ALA n 1 180 ALA n 1 181 GLY n 1 182 HIS n 1 183 GLN n 1 184 LEU n 1 185 ASN n 1 186 PHE n 1 187 SER n 1 188 LEU n 1 189 ILE n 1 190 THR n 1 191 LYS n 1 192 GLU n 1 193 ARG n 1 194 MET n 1 195 MET n 1 196 VAL n 1 197 ALA n 1 198 SER n 1 199 VAL n 1 200 ALA n 1 201 VAL n 1 202 ALA n 1 203 GLU n 1 204 ASN n 1 205 GLY n 1 206 ASP n 1 207 LEU n 1 208 GLU n 1 209 PRO n 1 210 MET n 1 211 GLN n 1 212 HIS n 1 213 LEU n 1 214 PHE n 1 215 GLU n 1 216 ASP n 1 217 ILE n 1 218 SER n 1 219 ASN n 1 220 PRO n 1 221 GLU n 1 222 LYS n 1 223 ILE n 1 224 ARG n 1 225 LEU n 1 226 LEU n 1 227 LYS n 1 228 GLU n 1 229 PHE n 1 230 MET n 1 231 HIS n 1 232 THR n 1 233 MET n 1 234 LYS n 1 235 ASN n 1 236 THR n 1 237 GLY n 1 238 ARG n 1 239 ASN n 1 240 VAL n 1 241 ASN n 1 242 ASP n 1 243 ARG n 1 244 PRO n 1 245 VAL n 1 246 MET n 1 247 VAL n 1 248 ALA n 1 249 LYS n 1 250 GLU n 1 251 GLY n 1 252 GLU n 1 253 THR n 1 254 TYR n 1 255 THR n 1 256 GLY n 1 257 THR n 1 258 TYR n 1 259 ARG n 1 260 GLY n 1 261 ALA n 1 262 GLY n 1 263 LEU n 1 264 GLU n 1 265 GLY n 1 266 PHE n 1 267 ALA n 1 268 LEU n 1 269 ASN n 1 270 VAL n 1 271 LYS n 1 272 GLY n 1 273 ALA n 1 274 TYR n 1 275 ILE n 1 276 ILE n 1 277 GLY n 1 278 ASN n 1 279 ILE n 1 280 ASP n 1 281 HIS n 1 282 LEU n 1 283 PRO n 1 284 PRO n 1 285 GLU n 1 286 GLN n 1 287 LEU n 1 288 LYS n 1 289 ILE n 1 290 LEU n 1 291 LYS n 1 292 PRO n 1 293 GLY n 1 294 ASP n 1 295 LYS n 1 296 ILE n 1 297 THR n 1 298 PHE n 1 299 THR n 1 300 ALA n 1 301 PRO n 1 302 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'BARTONELLA HENSELAE' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 38323 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc 49882 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant PLYSS _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PRUN _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q6G2A9_BARHE _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q6G2A9 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2JK8 A 1 ? 302 ? Q6G2A9 1 ? 302 ? 1 302 2 1 2JK8 B 1 ? 302 ? Q6G2A9 1 ? 302 ? 1 302 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 ATP non-polymer . "ADENOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O13 P3' 507.181 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 NI non-polymer . 'NICKEL (II) ION' ? 'Ni 2' 58.693 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2JK8 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2 _exptl_crystal.density_percent_sol 57 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.7 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'BETA-MERCAPTOETHANOL MIXED WITH 22 % POLYETHYLENE GLYCOL 4000, 0.1 M TRIS PH 8.7, 5 MM NICL2 IN A 1:1 (V:V) RATIO' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2006-05-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X06SA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X06SA _diffrn_source.pdbx_wavelength 0.9 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2JK8 _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 82.76 _reflns.d_resolution_high 2.73 _reflns.number_obs 17907 _reflns.number_all ? _reflns.percent_possible_obs 91.9 _reflns.pdbx_Rmerge_I_obs 0.10 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 5.60 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.45 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.80 _reflns_shell.d_res_low 2.95 _reflns_shell.percent_possible_all 55.9 _reflns_shell.Rmerge_I_obs 0.44 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.62 _reflns_shell.pdbx_redundancy 2.04 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2JK8 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.ls_number_reflns_obs 16976 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.00 _refine.ls_d_res_high 2.80 _refine.ls_percent_reflns_obs 91.7 _refine.ls_R_factor_obs 0.218 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.216 _refine.ls_R_factor_R_free 0.275 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 890 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.933 _refine.correlation_coeff_Fo_to_Fc_free 0.893 _refine.B_iso_mean 48.10 _refine.aniso_B[1][1] 1.26000 _refine.aniso_B[2][2] 1.35000 _refine.aniso_B[3][3] -2.61000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. DISORDERED REGIONS WERE MODELED STEREOCHEMICALLY. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. ; _refine.pdbx_starting_model 'PDB ENTRY 2VY3' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.413 _refine.overall_SU_ML 0.297 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 33.897 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 4668 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 15 _refine_hist.number_atoms_solvent 7 _refine_hist.number_atoms_total 4690 _refine_hist.d_res_high 2.80 _refine_hist.d_res_low 30.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.010 0.022 ? 4556 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 3066 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.189 1.949 ? 6161 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.867 3.000 ? 7419 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.237 5.000 ? 567 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.219 24.977 ? 221 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 17.824 15.000 ? 734 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 16.102 15.000 ? 18 'X-RAY DIFFRACTION' ? r_chiral_restr 0.060 0.200 ? 678 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 5125 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 915 'X-RAY DIFFRACTION' ? r_nbd_refined 0.212 0.200 ? 957 'X-RAY DIFFRACTION' ? r_nbd_other 0.178 0.200 ? 2899 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.180 0.200 ? 2203 'X-RAY DIFFRACTION' ? r_nbtor_other 0.090 0.200 ? 2390 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.188 0.200 ? 58 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.137 0.200 ? 8 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.197 0.200 ? 19 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.132 0.200 ? 2 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.942 1.500 ? 2902 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.509 2.000 ? 4549 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 2.712 3.000 ? 1820 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 4.279 4.500 ? 1612 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 1 A 1106 0.20 0.05 'tight positional' 1 1 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 1435 0.14 0.05 'tight positional' 2 2 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 603 0.11 0.05 'tight positional' 3 3 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 1106 0.44 0.50 'tight thermal' 1 4 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 1435 0.35 0.50 'tight thermal' 2 5 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 603 0.19 0.50 'tight thermal' 3 6 'X-RAY DIFFRACTION' ? ? ? ? ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 12 _refine_ls_shell.d_res_high 2.80 _refine_ls_shell.d_res_low 2.92 _refine_ls_shell.number_reflns_R_work 1060 _refine_ls_shell.R_factor_R_work 0.3080 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.4090 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 56 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _struct_ncs_oper.id _struct_ncs_oper.code _struct_ncs_oper.details _struct_ncs_oper.matrix[1][1] _struct_ncs_oper.matrix[1][2] _struct_ncs_oper.matrix[1][3] _struct_ncs_oper.matrix[2][1] _struct_ncs_oper.matrix[2][2] _struct_ncs_oper.matrix[2][3] _struct_ncs_oper.matrix[3][1] _struct_ncs_oper.matrix[3][2] _struct_ncs_oper.matrix[3][3] _struct_ncs_oper.vector[1] _struct_ncs_oper.vector[2] _struct_ncs_oper.vector[3] 1 given ? 0.867950 -0.491520 -0.071200 -0.483790 -0.869150 0.102610 -0.112320 -0.054620 -0.992170 44.18100 145.42900 137.40600 2 given ? 0.868030 -0.494940 -0.039410 -0.493750 -0.868840 0.036520 -0.052310 -0.012240 -0.998560 42.97400 148.57200 134.81100 # loop_ _struct_ncs_dom.id _struct_ncs_dom.details _struct_ncs_dom.pdbx_ens_id 1 A 1 2 B 1 1 A 2 2 B 2 1 A 3 2 B 3 # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 1 A ILE 13 . A PRO 22 . A ILE 13 A PRO 22 1 ? 1 2 1 B ILE 13 . B PRO 22 . B ILE 13 B PRO 22 1 ? 1 1 2 A THR 26 . A ILE 33 . A THR 26 A ILE 33 1 ? 1 2 2 B THR 26 . B ILE 33 . B THR 26 B ILE 33 1 ? 1 1 3 A LEU 36 . A SER 58 . A LEU 36 A SER 58 1 ? 1 2 3 B LEU 36 . B SER 58 . B LEU 36 B SER 58 1 ? 1 1 4 A TYR 62 . A ALA 100 . A TYR 62 A ALA 100 1 ? 1 2 4 B TYR 62 . B ALA 100 . B TYR 62 B ALA 100 1 ? 1 1 5 C NI . . C NI . . A NI 501 A NI 501 1 ? 1 2 5 G NI . . G NI . . B NI 501 B NI 501 1 ? 1 1 6 J HOH . . J HOH . . A HOH 2001 A HOH 2002 1 ? 1 2 6 K HOH . . K HOH . . B HOH 2001 B HOH 2002 1 ? 1 1 7 D NI . . D NI . . A NI 502 A NI 502 1 ? 1 2 7 H NI . . H NI . . B NI 502 B NI 502 1 ? 1 1 8 J HOH . . J HOH . . A HOH 2003 A HOH 2003 1 ? 1 2 8 K HOH . . K HOH . . B HOH 2003 B HOH 2003 1 ? 2 1 1 A ARG 125 . A GLU 142 . A ARG 125 A GLU 142 1 ? 2 2 1 B ARG 125 . B GLU 142 . B ARG 125 B GLU 142 1 ? 2 1 2 A PHE 144 . A LEU 155 . A PHE 144 A LEU 155 1 ? 2 2 2 B PHE 144 . B LEU 155 . B PHE 144 B LEU 155 1 ? 2 1 3 A PRO 160 . A GLU 174 . A PRO 160 A GLU 174 1 ? 2 2 3 B PRO 160 . B GLU 174 . B PRO 160 B GLU 174 1 ? 2 1 4 A LEU 176 . A ARG 238 . A LEU 176 A ARG 238 1 ? 2 2 4 B LEU 176 . B ARG 238 . B LEU 176 B ARG 238 1 ? 3 1 1 A MET 246 . A GLY 256 . A MET 246 A GLY 256 1 ? 3 2 1 B MET 246 . B GLY 256 . B MET 246 B GLY 256 1 ? 3 1 2 A TYR 258 . A PRO 292 . A TYR 258 A PRO 292 1 ? 3 2 2 B TYR 258 . B PRO 292 . B TYR 258 B PRO 292 1 ? 3 1 3 A ILE 296 . A ALA 300 . A ILE 296 A ALA 300 1 ? 3 2 3 B ILE 296 . B ALA 300 . B ILE 296 B ALA 300 1 ? # loop_ _struct_ncs_ens.id _struct_ncs_ens.details 1 ? 2 ? 3 ? # _struct.entry_id 2JK8 _struct.title 'Type IV secretion system effector protein BepA complexed with a pyrophosphate moiety' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2JK8 _struct_keywords.pdbx_keywords 'CELL ADHESION' _struct_keywords.text 'T4SS, OB FOLD, FIC DOMAIN, SUBSTRATE PROTEIN, PROTEIN TRANSLOCATION, CELL ADHESION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 2 ? H N N 2 ? I N N 5 ? J N N 6 ? K N N 6 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 15 ? TYR A 19 ? SER A 15 TYR A 19 5 ? 5 HELX_P HELX_P2 2 ASN A 35 ? ARG A 55 ? ASN A 35 ARG A 55 1 ? 21 HELX_P HELX_P3 3 ASP A 64 ? LYS A 77 ? ASP A 64 LYS A 77 1 ? 14 HELX_P HELX_P4 4 GLY A 116 ? LYS A 133 ? GLY A 116 LYS A 133 1 ? 18 HELX_P HELX_P5 5 ASN A 134 ? GLN A 137 ? ASN A 134 GLN A 137 5 ? 4 HELX_P HELX_P6 6 THR A 140 ? HIS A 159 ? THR A 140 HIS A 159 1 ? 20 HELX_P HELX_P7 7 GLY A 164 ? ALA A 180 ? GLY A 164 ALA A 180 1 ? 17 HELX_P HELX_P8 8 ASN A 185 ? ILE A 189 ? ASN A 185 ILE A 189 5 ? 5 HELX_P HELX_P9 9 THR A 190 ? ASN A 204 ? THR A 190 ASN A 204 1 ? 15 HELX_P HELX_P10 10 LEU A 207 ? ASN A 219 ? LEU A 207 ASN A 219 1 ? 13 HELX_P HELX_P11 11 ASN A 219 ? MET A 233 ? ASN A 219 MET A 233 1 ? 15 HELX_P HELX_P12 12 ASN A 239 ? ARG A 243 ? ASN A 239 ARG A 243 5 ? 5 HELX_P HELX_P13 13 ASP A 280 ? LEU A 282 ? ASP A 280 LEU A 282 5 ? 3 HELX_P HELX_P14 14 PRO A 283 ? ILE A 289 ? PRO A 283 ILE A 289 1 ? 7 HELX_P HELX_P15 15 SER B 15 ? TYR B 19 ? SER B 15 TYR B 19 5 ? 5 HELX_P HELX_P16 16 ASN B 35 ? ARG B 55 ? ASN B 35 ARG B 55 1 ? 21 HELX_P HELX_P17 17 ASP B 64 ? LYS B 77 ? ASP B 64 LYS B 77 1 ? 14 HELX_P HELX_P18 18 ASP B 117 ? LYS B 133 ? ASP B 117 LYS B 133 1 ? 17 HELX_P HELX_P19 19 ASN B 134 ? GLN B 137 ? ASN B 134 GLN B 137 5 ? 4 HELX_P HELX_P20 20 THR B 140 ? HIS B 159 ? THR B 140 HIS B 159 1 ? 20 HELX_P HELX_P21 21 GLY B 164 ? GLY B 181 ? GLY B 164 GLY B 181 1 ? 18 HELX_P HELX_P22 22 ASN B 185 ? ILE B 189 ? ASN B 185 ILE B 189 5 ? 5 HELX_P HELX_P23 23 THR B 190 ? GLY B 205 ? THR B 190 GLY B 205 1 ? 16 HELX_P HELX_P24 24 LEU B 207 ? ASN B 219 ? LEU B 207 ASN B 219 1 ? 13 HELX_P HELX_P25 25 ASN B 219 ? LYS B 234 ? ASN B 219 LYS B 234 1 ? 16 HELX_P HELX_P26 26 ASP B 280 ? LEU B 282 ? ASP B 280 LEU B 282 5 ? 3 HELX_P HELX_P27 27 PRO B 283 ? ILE B 289 ? PRO B 283 ILE B 289 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A HIS 17 NE2 ? ? ? 1_555 C NI . NI ? ? A HIS 17 A NI 501 1_555 ? ? ? ? ? ? ? 2.073 ? ? metalc2 metalc ? ? A HIS 18 NE2 ? ? ? 1_555 C NI . NI ? ? A HIS 18 A NI 501 1_555 ? ? ? ? ? ? ? 2.026 ? ? metalc3 metalc ? ? A HIS 45 NE2 ? ? ? 1_555 D NI . NI ? ? A HIS 45 A NI 502 1_555 ? ? ? ? ? ? ? 2.076 ? ? metalc4 metalc ? ? A LYS 49 NZ ? ? ? 1_555 D NI . NI ? ? A LYS 49 A NI 502 1_555 ? ? ? ? ? ? ? 2.015 ? ? metalc5 metalc ? ? A GLU 163 OE2 ? ? ? 1_555 F MG . MG ? ? A GLU 163 A MG 702 1_555 ? ? ? ? ? ? ? 2.178 ? ? metalc6 metalc ? ? A HIS 231 NE2 ? ? ? 1_555 H NI . NI ? ? A HIS 231 B NI 502 1_555 ? ? ? ? ? ? ? 2.035 ? ? metalc7 metalc ? ? C NI . NI ? ? ? 1_555 J HOH . O ? ? A NI 501 A HOH 2001 1_555 ? ? ? ? ? ? ? 1.865 ? ? metalc8 metalc ? ? D NI . NI ? ? ? 1_555 J HOH . O ? ? A NI 502 A HOH 2003 1_555 ? ? ? ? ? ? ? 2.433 ? ? metalc9 metalc ? ? D NI . NI ? ? ? 1_555 B HIS 231 NE2 ? ? A NI 502 B HIS 231 1_555 ? ? ? ? ? ? ? 2.027 ? ? metalc10 metalc ? ? D NI . NI ? ? ? 1_555 K HOH . O ? ? A NI 502 B HOH 2003 1_555 ? ? ? ? ? ? ? 2.134 ? ? metalc11 metalc ? ? E ATP . O3A ? ? ? 1_555 F MG . MG ? ? A ATP 701 A MG 702 1_555 ? ? ? ? ? ? ? 2.179 ? ? metalc12 metalc ? ? E ATP . O2G ? ? ? 1_555 F MG . MG ? ? A ATP 701 A MG 702 1_555 ? ? ? ? ? ? ? 2.180 ? ? metalc13 metalc ? ? J HOH . O ? ? ? 1_555 H NI . NI ? ? A HOH 2004 B NI 502 1_555 ? ? ? ? ? ? ? 2.134 ? ? metalc14 metalc ? ? B HIS 17 NE2 ? ? ? 1_555 G NI . NI ? ? B HIS 17 B NI 501 1_555 ? ? ? ? ? ? ? 2.044 ? ? metalc15 metalc ? ? B HIS 18 NE2 ? ? ? 1_555 G NI . NI ? ? B HIS 18 B NI 501 1_555 ? ? ? ? ? ? ? 2.073 ? ? metalc16 metalc ? ? B HIS 45 NE2 ? ? ? 1_555 H NI . NI ? ? B HIS 45 B NI 502 1_555 ? ? ? ? ? ? ? 2.051 ? ? metalc17 metalc ? ? B LYS 49 NZ ? ? ? 1_555 H NI . NI ? ? B LYS 49 B NI 502 1_555 ? ? ? ? ? ? ? 2.003 ? ? metalc18 metalc ? ? G NI . NI ? ? ? 1_555 K HOH . O ? ? B NI 501 B HOH 2002 1_555 ? ? ? ? ? ? ? 2.239 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 2 ? AB ? 5 ? BA ? 2 ? BB ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AB 1 2 ? parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel AB 4 5 ? anti-parallel BA 1 2 ? anti-parallel BB 1 2 ? parallel BB 2 3 ? anti-parallel BB 3 4 ? anti-parallel BB 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 PHE A 91 ? THR A 92 ? PHE A 91 THR A 92 AA 2 THR A 98 ? ALA A 99 ? THR A 98 ALA A 99 AB 1 VAL A 245 ? VAL A 247 ? VAL A 245 VAL A 247 AB 2 TYR A 274 ? ASN A 278 ? TYR A 274 ASN A 278 AB 3 GLY A 265 ? ASN A 269 ? GLY A 265 ASN A 269 AB 4 THR A 253 ? ALA A 261 ? THR A 253 ALA A 261 AB 5 LYS A 295 ? THR A 299 ? LYS A 295 THR A 299 BA 1 PHE B 91 ? THR B 92 ? PHE B 91 THR B 92 BA 2 THR B 98 ? ALA B 99 ? THR B 98 ALA B 99 BB 1 VAL B 245 ? VAL B 247 ? VAL B 245 VAL B 247 BB 2 ALA B 273 ? ASN B 278 ? ALA B 273 ASN B 278 BB 3 GLY B 265 ? VAL B 270 ? GLY B 265 VAL B 270 BB 4 THR B 253 ? ALA B 261 ? THR B 253 ALA B 261 BB 5 LYS B 295 ? THR B 299 ? LYS B 295 THR B 299 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N PHE A 91 ? N PHE A 91 O ALA A 99 ? O ALA A 99 AB 1 2 N MET A 246 ? N MET A 246 O TYR A 274 ? O TYR A 274 AB 2 3 N GLY A 277 ? N GLY A 277 O PHE A 266 ? O PHE A 266 AB 3 4 N ASN A 269 ? N ASN A 269 O THR A 257 ? O THR A 257 AB 4 5 N GLY A 256 ? N GLY A 256 O ILE A 296 ? O ILE A 296 BA 1 2 N PHE B 91 ? N PHE B 91 O ALA B 99 ? O ALA B 99 BB 1 2 N MET B 246 ? N MET B 246 O TYR B 274 ? O TYR B 274 BB 2 3 N GLY B 277 ? N GLY B 277 O PHE B 266 ? O PHE B 266 BB 3 4 N ASN B 269 ? N ASN B 269 O THR B 257 ? O THR B 257 BB 4 5 N GLY B 256 ? N GLY B 256 O ILE B 296 ? O ILE B 296 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NI 501 ? 4 'BINDING SITE FOR RESIDUE NI A 501' AC2 Software A NI 502 ? 5 'BINDING SITE FOR RESIDUE NI A 502' AC3 Software A ATP 701 ? 6 'BINDING SITE FOR RESIDUE ATP A 701' AC4 Software A MG 702 ? 2 'BINDING SITE FOR RESIDUE MG A 702' AC5 Software B NI 501 ? 3 'BINDING SITE FOR RESIDUE NI B 501' AC6 Software B NI 502 ? 4 'BINDING SITE FOR RESIDUE NI B 502' AC7 Software B CL 601 ? 3 'BINDING SITE FOR RESIDUE CL B 601' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 HIS A 17 ? HIS A 17 . ? 1_555 ? 2 AC1 4 HIS A 18 ? HIS A 18 . ? 1_555 ? 3 AC1 4 HOH J . ? HOH A 2001 . ? 1_555 ? 4 AC1 4 HOH J . ? HOH A 2002 . ? 1_555 ? 5 AC2 5 HIS A 45 ? HIS A 45 . ? 1_555 ? 6 AC2 5 LYS A 49 ? LYS A 49 . ? 1_555 ? 7 AC2 5 HOH J . ? HOH A 2003 . ? 1_555 ? 8 AC2 5 HIS B 231 ? HIS B 231 . ? 1_555 ? 9 AC2 5 HOH K . ? HOH B 2003 . ? 1_555 ? 10 AC3 6 GLU A 163 ? GLU A 163 . ? 1_555 ? 11 AC3 6 GLY A 164 ? GLY A 164 . ? 1_555 ? 12 AC3 6 ASN A 165 ? ASN A 165 . ? 1_555 ? 13 AC3 6 GLY A 166 ? GLY A 166 . ? 1_555 ? 14 AC3 6 ARG A 167 ? ARG A 167 . ? 1_555 ? 15 AC3 6 MG F . ? MG A 702 . ? 1_555 ? 16 AC4 2 GLU A 163 ? GLU A 163 . ? 1_555 ? 17 AC4 2 ATP E . ? ATP A 701 . ? 1_555 ? 18 AC5 3 HIS B 17 ? HIS B 17 . ? 1_555 ? 19 AC5 3 HIS B 18 ? HIS B 18 . ? 1_555 ? 20 AC5 3 HOH K . ? HOH B 2002 . ? 1_555 ? 21 AC6 4 HIS A 231 ? HIS A 231 . ? 1_555 ? 22 AC6 4 HOH J . ? HOH A 2004 . ? 1_555 ? 23 AC6 4 HIS B 45 ? HIS B 45 . ? 1_555 ? 24 AC6 4 LYS B 49 ? LYS B 49 . ? 1_555 ? 25 AC7 3 GLY B 164 ? GLY B 164 . ? 1_555 ? 26 AC7 3 GLY B 166 ? GLY B 166 . ? 1_555 ? 27 AC7 3 ARG B 167 ? ARG B 167 . ? 1_555 ? # _database_PDB_matrix.entry_id 2JK8 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2JK8 _atom_sites.fract_transf_matrix[1][1] 0.013708 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012066 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007891 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL MG N NI O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 PRO 2 2 ? ? ? A . n A 1 3 LYS 3 3 ? ? ? A . n A 1 4 ALA 4 4 ? ? ? A . n A 1 5 LYS 5 5 ? ? ? A . n A 1 6 ALA 6 6 ? ? ? A . n A 1 7 LYS 7 7 ? ? ? A . n A 1 8 THR 8 8 ? ? ? A . n A 1 9 LYS 9 9 ? ? ? A . n A 1 10 ASN 10 10 ? ? ? A . n A 1 11 THR 11 11 ? ? ? A . n A 1 12 GLU 12 12 12 GLU GLU A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 ILE 14 14 14 ILE ILE A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 PRO 16 16 16 PRO PRO A . n A 1 17 HIS 17 17 17 HIS HIS A . n A 1 18 HIS 18 18 18 HIS HIS A . n A 1 19 TYR 19 19 19 TYR TYR A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 TYR 21 21 21 TYR TYR A . n A 1 22 PRO 22 22 22 PRO PRO A . n A 1 23 ASN 23 23 23 ASN ASN A . n A 1 24 THR 24 24 24 THR THR A . n A 1 25 THR 25 25 25 THR THR A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 LYS 28 28 28 LYS LYS A . n A 1 29 ASN 29 29 29 ASN ASN A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 TYR 31 31 31 TYR TYR A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 LYS 34 34 34 LYS LYS A . n A 1 35 ASN 35 35 35 ASN ASN A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 PHE 39 39 39 PHE PHE A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 GLU 41 41 41 GLU GLU A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 CYS 43 43 43 CYS CYS A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 HIS 45 45 45 HIS HIS A . n A 1 46 ASP 46 46 46 ASP ASP A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 ALA 48 48 48 ALA ALA A . n A 1 49 LYS 49 49 49 LYS LYS A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 MET 51 51 51 MET MET A . n A 1 52 ILE 52 52 52 ILE ILE A . n A 1 53 ASN 53 53 53 ASN ASN A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 ARG 55 55 55 ARG ARG A . n A 1 56 GLU 56 56 56 GLU GLU A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 SER 58 58 58 SER SER A . n A 1 59 LEU 59 59 59 LEU LEU A . n A 1 60 PRO 60 60 60 PRO PRO A . n A 1 61 GLU 61 61 61 GLU GLU A . n A 1 62 TYR 62 62 62 TYR TYR A . n A 1 63 PHE 63 63 63 PHE PHE A . n A 1 64 ASP 64 64 64 ASP ASP A . n A 1 65 THR 65 65 65 THR THR A . n A 1 66 ALA 66 66 66 ALA ALA A . n A 1 67 TYR 67 67 67 TYR TYR A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 CYS 69 69 69 CYS CYS A . n A 1 70 HIS 70 70 70 HIS HIS A . n A 1 71 ILE 71 71 71 ILE ILE A . n A 1 72 HIS 72 72 72 HIS HIS A . n A 1 73 GLN 73 73 73 GLN GLN A . n A 1 74 GLN 74 74 74 GLN GLN A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 PHE 76 76 76 PHE PHE A . n A 1 77 LYS 77 77 77 LYS LYS A . n A 1 78 ASN 78 78 78 ASN ASN A . n A 1 79 THR 79 79 79 THR THR A . n A 1 80 PHE 80 80 80 PHE PHE A . n A 1 81 GLU 81 81 81 GLU GLU A . n A 1 82 TRP 82 82 82 TRP TRP A . n A 1 83 ALA 83 83 83 ALA ALA A . n A 1 84 GLY 84 84 84 GLY GLY A . n A 1 85 TYR 85 85 85 TYR TYR A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 ARG 87 87 87 ARG ARG A . n A 1 88 HIS 88 88 88 HIS HIS A . n A 1 89 ILE 89 89 89 ILE ILE A . n A 1 90 PRO 90 90 90 PRO PRO A . n A 1 91 PHE 91 91 91 PHE PHE A . n A 1 92 THR 92 92 92 THR THR A . n A 1 93 PHE 93 93 93 PHE PHE A . n A 1 94 ALA 94 94 94 ALA ALA A . n A 1 95 ASP 95 95 95 ASP ASP A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 THR 97 97 97 THR THR A . n A 1 98 THR 98 98 98 THR THR A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 ALA 100 100 100 ALA ALA A . n A 1 101 MET 101 101 101 MET MET A . n A 1 102 PRO 102 102 102 PRO PRO A . n A 1 103 GLU 103 103 103 GLU GLU A . n A 1 104 MET 104 104 104 MET MET A . n A 1 105 LYS 105 105 105 LYS LYS A . n A 1 106 ARG 106 106 106 ARG ARG A . n A 1 107 THR 107 107 107 THR THR A . n A 1 108 GLY 108 108 108 GLY GLY A . n A 1 109 TRP 109 109 109 TRP TRP A . n A 1 110 LYS 110 110 110 LYS LYS A . n A 1 111 ASN 111 111 111 ASN ASN A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 PHE 113 113 113 PHE PHE A . n A 1 114 ALA 114 114 114 ALA ALA A . n A 1 115 ILE 115 115 115 ILE ILE A . n A 1 116 GLY 116 116 116 GLY GLY A . n A 1 117 ASP 117 117 117 ASP ASP A . n A 1 118 GLU 118 118 118 GLU GLU A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 GLN 120 120 120 GLN GLN A . n A 1 121 GLU 121 121 121 GLU GLU A . n A 1 122 GLY 122 122 122 GLY GLY A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 GLN 124 124 124 GLN GLN A . n A 1 125 ARG 125 125 125 ARG ARG A . n A 1 126 LEU 126 126 126 LEU LEU A . n A 1 127 ASP 127 127 127 ASP ASP A . n A 1 128 GLN 128 128 128 GLN GLN A . n A 1 129 THR 129 129 129 THR THR A . n A 1 130 LEU 130 130 130 LEU LEU A . n A 1 131 ALA 131 131 131 ALA ALA A . n A 1 132 GLU 132 132 132 GLU GLU A . n A 1 133 LYS 133 133 133 LYS LYS A . n A 1 134 ASN 134 134 134 ASN ASN A . n A 1 135 ASN 135 135 135 ASN ASN A . n A 1 136 LEU 136 136 136 LEU LEU A . n A 1 137 GLN 137 137 137 GLN GLN A . n A 1 138 GLY 138 138 138 GLY GLY A . n A 1 139 LEU 139 139 139 LEU LEU A . n A 1 140 THR 140 140 140 THR THR A . n A 1 141 ARG 141 141 141 ARG ARG A . n A 1 142 GLU 142 142 142 GLU GLU A . n A 1 143 GLU 143 143 143 GLU GLU A . n A 1 144 PHE 144 144 144 PHE PHE A . n A 1 145 ASN 145 145 145 ASN ASN A . n A 1 146 SER 146 146 146 SER SER A . n A 1 147 GLU 147 147 147 GLU GLU A . n A 1 148 ALA 148 148 148 ALA ALA A . n A 1 149 ILE 149 149 149 ILE ILE A . n A 1 150 GLU 150 150 150 GLU GLU A . n A 1 151 LEU 151 151 151 LEU LEU A . n A 1 152 PHE 152 152 152 PHE PHE A . n A 1 153 ASN 153 153 153 ASN ASN A . n A 1 154 SER 154 154 154 SER SER A . n A 1 155 LEU 155 155 155 LEU LEU A . n A 1 156 ASN 156 156 156 ASN ASN A . n A 1 157 GLN 157 157 157 GLN GLN A . n A 1 158 LEU 158 158 158 LEU LEU A . n A 1 159 HIS 159 159 159 HIS HIS A . n A 1 160 PRO 160 160 160 PRO PRO A . n A 1 161 PHE 161 161 161 PHE PHE A . n A 1 162 ARG 162 162 162 ARG ARG A . n A 1 163 GLU 163 163 163 GLU GLU A . n A 1 164 GLY 164 164 164 GLY GLY A . n A 1 165 ASN 165 165 165 ASN ASN A . n A 1 166 GLY 166 166 166 GLY GLY A . n A 1 167 ARG 167 167 167 ARG ARG A . n A 1 168 THR 168 168 168 THR THR A . n A 1 169 GLN 169 169 169 GLN GLN A . n A 1 170 ARG 170 170 170 ARG ARG A . n A 1 171 LEU 171 171 171 LEU LEU A . n A 1 172 PHE 172 172 172 PHE PHE A . n A 1 173 PHE 173 173 173 PHE PHE A . n A 1 174 GLU 174 174 174 GLU GLU A . n A 1 175 ASN 175 175 175 ASN ASN A . n A 1 176 LEU 176 176 176 LEU LEU A . n A 1 177 ALA 177 177 177 ALA ALA A . n A 1 178 LYS 178 178 178 LYS LYS A . n A 1 179 ALA 179 179 179 ALA ALA A . n A 1 180 ALA 180 180 180 ALA ALA A . n A 1 181 GLY 181 181 181 GLY GLY A . n A 1 182 HIS 182 182 182 HIS HIS A . n A 1 183 GLN 183 183 183 GLN GLN A . n A 1 184 LEU 184 184 184 LEU LEU A . n A 1 185 ASN 185 185 185 ASN ASN A . n A 1 186 PHE 186 186 186 PHE PHE A . n A 1 187 SER 187 187 187 SER SER A . n A 1 188 LEU 188 188 188 LEU LEU A . n A 1 189 ILE 189 189 189 ILE ILE A . n A 1 190 THR 190 190 190 THR THR A . n A 1 191 LYS 191 191 191 LYS LYS A . n A 1 192 GLU 192 192 192 GLU GLU A . n A 1 193 ARG 193 193 193 ARG ARG A . n A 1 194 MET 194 194 194 MET MET A . n A 1 195 MET 195 195 195 MET MET A . n A 1 196 VAL 196 196 196 VAL VAL A . n A 1 197 ALA 197 197 197 ALA ALA A . n A 1 198 SER 198 198 198 SER SER A . n A 1 199 VAL 199 199 199 VAL VAL A . n A 1 200 ALA 200 200 200 ALA ALA A . n A 1 201 VAL 201 201 201 VAL VAL A . n A 1 202 ALA 202 202 202 ALA ALA A . n A 1 203 GLU 203 203 203 GLU GLU A . n A 1 204 ASN 204 204 204 ASN ASN A . n A 1 205 GLY 205 205 205 GLY GLY A . n A 1 206 ASP 206 206 206 ASP ASP A . n A 1 207 LEU 207 207 207 LEU LEU A . n A 1 208 GLU 208 208 208 GLU GLU A . n A 1 209 PRO 209 209 209 PRO PRO A . n A 1 210 MET 210 210 210 MET MET A . n A 1 211 GLN 211 211 211 GLN GLN A . n A 1 212 HIS 212 212 212 HIS HIS A . n A 1 213 LEU 213 213 213 LEU LEU A . n A 1 214 PHE 214 214 214 PHE PHE A . n A 1 215 GLU 215 215 215 GLU GLU A . n A 1 216 ASP 216 216 216 ASP ASP A . n A 1 217 ILE 217 217 217 ILE ILE A . n A 1 218 SER 218 218 218 SER SER A . n A 1 219 ASN 219 219 219 ASN ASN A . n A 1 220 PRO 220 220 220 PRO PRO A . n A 1 221 GLU 221 221 221 GLU GLU A . n A 1 222 LYS 222 222 222 LYS LYS A . n A 1 223 ILE 223 223 223 ILE ILE A . n A 1 224 ARG 224 224 224 ARG ARG A . n A 1 225 LEU 225 225 225 LEU LEU A . n A 1 226 LEU 226 226 226 LEU LEU A . n A 1 227 LYS 227 227 227 LYS LYS A . n A 1 228 GLU 228 228 228 GLU GLU A . n A 1 229 PHE 229 229 229 PHE PHE A . n A 1 230 MET 230 230 230 MET MET A . n A 1 231 HIS 231 231 231 HIS HIS A . n A 1 232 THR 232 232 232 THR THR A . n A 1 233 MET 233 233 233 MET MET A . n A 1 234 LYS 234 234 234 LYS LYS A . n A 1 235 ASN 235 235 235 ASN ASN A . n A 1 236 THR 236 236 236 THR THR A . n A 1 237 GLY 237 237 237 GLY GLY A . n A 1 238 ARG 238 238 238 ARG ARG A . n A 1 239 ASN 239 239 239 ASN ASN A . n A 1 240 VAL 240 240 240 VAL VAL A . n A 1 241 ASN 241 241 241 ASN ASN A . n A 1 242 ASP 242 242 242 ASP ASP A . n A 1 243 ARG 243 243 243 ARG ARG A . n A 1 244 PRO 244 244 244 PRO PRO A . n A 1 245 VAL 245 245 245 VAL VAL A . n A 1 246 MET 246 246 246 MET MET A . n A 1 247 VAL 247 247 247 VAL VAL A . n A 1 248 ALA 248 248 248 ALA ALA A . n A 1 249 LYS 249 249 249 LYS LYS A . n A 1 250 GLU 250 250 250 GLU GLU A . n A 1 251 GLY 251 251 251 GLY GLY A . n A 1 252 GLU 252 252 252 GLU GLU A . n A 1 253 THR 253 253 253 THR THR A . n A 1 254 TYR 254 254 254 TYR TYR A . n A 1 255 THR 255 255 255 THR THR A . n A 1 256 GLY 256 256 256 GLY GLY A . n A 1 257 THR 257 257 257 THR THR A . n A 1 258 TYR 258 258 258 TYR TYR A . n A 1 259 ARG 259 259 259 ARG ARG A . n A 1 260 GLY 260 260 260 GLY GLY A . n A 1 261 ALA 261 261 261 ALA ALA A . n A 1 262 GLY 262 262 262 GLY GLY A . n A 1 263 LEU 263 263 263 LEU LEU A . n A 1 264 GLU 264 264 264 GLU GLU A . n A 1 265 GLY 265 265 265 GLY GLY A . n A 1 266 PHE 266 266 266 PHE PHE A . n A 1 267 ALA 267 267 267 ALA ALA A . n A 1 268 LEU 268 268 268 LEU LEU A . n A 1 269 ASN 269 269 269 ASN ASN A . n A 1 270 VAL 270 270 270 VAL VAL A . n A 1 271 LYS 271 271 271 LYS LYS A . n A 1 272 GLY 272 272 272 GLY GLY A . n A 1 273 ALA 273 273 273 ALA ALA A . n A 1 274 TYR 274 274 274 TYR TYR A . n A 1 275 ILE 275 275 275 ILE ILE A . n A 1 276 ILE 276 276 276 ILE ILE A . n A 1 277 GLY 277 277 277 GLY GLY A . n A 1 278 ASN 278 278 278 ASN ASN A . n A 1 279 ILE 279 279 279 ILE ILE A . n A 1 280 ASP 280 280 280 ASP ASP A . n A 1 281 HIS 281 281 281 HIS HIS A . n A 1 282 LEU 282 282 282 LEU LEU A . n A 1 283 PRO 283 283 283 PRO PRO A . n A 1 284 PRO 284 284 284 PRO PRO A . n A 1 285 GLU 285 285 285 GLU GLU A . n A 1 286 GLN 286 286 286 GLN GLN A . n A 1 287 LEU 287 287 287 LEU LEU A . n A 1 288 LYS 288 288 288 LYS LYS A . n A 1 289 ILE 289 289 289 ILE ILE A . n A 1 290 LEU 290 290 290 LEU LEU A . n A 1 291 LYS 291 291 291 LYS LYS A . n A 1 292 PRO 292 292 292 PRO PRO A . n A 1 293 GLY 293 293 293 GLY GLY A . n A 1 294 ASP 294 294 294 ASP ASP A . n A 1 295 LYS 295 295 295 LYS LYS A . n A 1 296 ILE 296 296 296 ILE ILE A . n A 1 297 THR 297 297 297 THR THR A . n A 1 298 PHE 298 298 298 PHE PHE A . n A 1 299 THR 299 299 299 THR THR A . n A 1 300 ALA 300 300 300 ALA ALA A . n A 1 301 PRO 301 301 301 PRO PRO A . n A 1 302 LYS 302 302 302 LYS LYS A . n B 1 1 MET 1 1 ? ? ? B . n B 1 2 PRO 2 2 ? ? ? B . n B 1 3 LYS 3 3 ? ? ? B . n B 1 4 ALA 4 4 ? ? ? B . n B 1 5 LYS 5 5 ? ? ? B . n B 1 6 ALA 6 6 ? ? ? B . n B 1 7 LYS 7 7 ? ? ? B . n B 1 8 THR 8 8 ? ? ? B . n B 1 9 LYS 9 9 ? ? ? B . n B 1 10 ASN 10 10 ? ? ? B . n B 1 11 THR 11 11 ? ? ? B . n B 1 12 GLU 12 12 12 GLU GLU B . n B 1 13 ILE 13 13 13 ILE ILE B . n B 1 14 ILE 14 14 14 ILE ILE B . n B 1 15 SER 15 15 15 SER SER B . n B 1 16 PRO 16 16 16 PRO PRO B . n B 1 17 HIS 17 17 17 HIS HIS B . n B 1 18 HIS 18 18 18 HIS HIS B . n B 1 19 TYR 19 19 19 TYR TYR B . n B 1 20 VAL 20 20 20 VAL VAL B . n B 1 21 TYR 21 21 21 TYR TYR B . n B 1 22 PRO 22 22 22 PRO PRO B . n B 1 23 ASN 23 23 23 ASN ASN B . n B 1 24 THR 24 24 24 THR THR B . n B 1 25 THR 25 25 25 THR THR B . n B 1 26 THR 26 26 26 THR THR B . n B 1 27 LEU 27 27 27 LEU LEU B . n B 1 28 LYS 28 28 28 LYS LYS B . n B 1 29 ASN 29 29 29 ASN ASN B . n B 1 30 LYS 30 30 30 LYS LYS B . n B 1 31 TYR 31 31 31 TYR TYR B . n B 1 32 GLY 32 32 32 GLY GLY B . n B 1 33 ILE 33 33 33 ILE ILE B . n B 1 34 LYS 34 34 34 LYS LYS B . n B 1 35 ASN 35 35 35 ASN ASN B . n B 1 36 LEU 36 36 36 LEU LEU B . n B 1 37 ASN 37 37 37 ASN ASN B . n B 1 38 ALA 38 38 38 ALA ALA B . n B 1 39 PHE 39 39 39 PHE PHE B . n B 1 40 LEU 40 40 40 LEU LEU B . n B 1 41 GLU 41 41 41 GLU GLU B . n B 1 42 LYS 42 42 42 LYS LYS B . n B 1 43 CYS 43 43 43 CYS CYS B . n B 1 44 SER 44 44 44 SER SER B . n B 1 45 HIS 45 45 45 HIS HIS B . n B 1 46 ASP 46 46 46 ASP ASP B . n B 1 47 THR 47 47 47 THR THR B . n B 1 48 ALA 48 48 48 ALA ALA B . n B 1 49 LYS 49 49 49 LYS LYS B . n B 1 50 ALA 50 50 50 ALA ALA B . n B 1 51 MET 51 51 51 MET MET B . n B 1 52 ILE 52 52 52 ILE ILE B . n B 1 53 ASN 53 53 53 ASN ASN B . n B 1 54 LEU 54 54 54 LEU LEU B . n B 1 55 ARG 55 55 55 ARG ARG B . n B 1 56 GLU 56 56 56 GLU GLU B . n B 1 57 GLU 57 57 57 GLU GLU B . n B 1 58 SER 58 58 58 SER SER B . n B 1 59 LEU 59 59 59 LEU LEU B . n B 1 60 PRO 60 60 60 PRO PRO B . n B 1 61 GLU 61 61 61 GLU GLU B . n B 1 62 TYR 62 62 62 TYR TYR B . n B 1 63 PHE 63 63 63 PHE PHE B . n B 1 64 ASP 64 64 64 ASP ASP B . n B 1 65 THR 65 65 65 THR THR B . n B 1 66 ALA 66 66 66 ALA ALA B . n B 1 67 TYR 67 67 67 TYR TYR B . n B 1 68 LEU 68 68 68 LEU LEU B . n B 1 69 CYS 69 69 69 CYS CYS B . n B 1 70 HIS 70 70 70 HIS HIS B . n B 1 71 ILE 71 71 71 ILE ILE B . n B 1 72 HIS 72 72 72 HIS HIS B . n B 1 73 GLN 73 73 73 GLN GLN B . n B 1 74 GLN 74 74 74 GLN GLN B . n B 1 75 LEU 75 75 75 LEU LEU B . n B 1 76 PHE 76 76 76 PHE PHE B . n B 1 77 LYS 77 77 77 LYS LYS B . n B 1 78 ASN 78 78 78 ASN ASN B . n B 1 79 THR 79 79 79 THR THR B . n B 1 80 PHE 80 80 80 PHE PHE B . n B 1 81 GLU 81 81 81 GLU GLU B . n B 1 82 TRP 82 82 82 TRP TRP B . n B 1 83 ALA 83 83 83 ALA ALA B . n B 1 84 GLY 84 84 84 GLY GLY B . n B 1 85 TYR 85 85 85 TYR TYR B . n B 1 86 LEU 86 86 86 LEU LEU B . n B 1 87 ARG 87 87 87 ARG ARG B . n B 1 88 HIS 88 88 88 HIS HIS B . n B 1 89 ILE 89 89 89 ILE ILE B . n B 1 90 PRO 90 90 90 PRO PRO B . n B 1 91 PHE 91 91 91 PHE PHE B . n B 1 92 THR 92 92 92 THR THR B . n B 1 93 PHE 93 93 93 PHE PHE B . n B 1 94 ALA 94 94 94 ALA ALA B . n B 1 95 ASP 95 95 95 ASP ASP B . n B 1 96 GLY 96 96 96 GLY GLY B . n B 1 97 THR 97 97 97 THR THR B . n B 1 98 THR 98 98 98 THR THR B . n B 1 99 ALA 99 99 99 ALA ALA B . n B 1 100 ALA 100 100 100 ALA ALA B . n B 1 101 MET 101 101 101 MET MET B . n B 1 102 PRO 102 102 102 PRO PRO B . n B 1 103 GLU 103 103 103 GLU GLU B . n B 1 104 MET 104 104 104 MET MET B . n B 1 105 LYS 105 105 105 LYS LYS B . n B 1 106 ARG 106 106 106 ARG ARG B . n B 1 107 THR 107 107 107 THR THR B . n B 1 108 GLY 108 108 108 GLY GLY B . n B 1 109 TRP 109 109 109 TRP TRP B . n B 1 110 LYS 110 110 110 LYS LYS B . n B 1 111 ASN 111 111 111 ASN ASN B . n B 1 112 ALA 112 112 112 ALA ALA B . n B 1 113 PHE 113 113 113 PHE PHE B . n B 1 114 ALA 114 114 114 ALA ALA B . n B 1 115 ILE 115 115 115 ILE ILE B . n B 1 116 GLY 116 116 116 GLY GLY B . n B 1 117 ASP 117 117 117 ASP ASP B . n B 1 118 GLU 118 118 118 GLU GLU B . n B 1 119 ILE 119 119 119 ILE ILE B . n B 1 120 GLN 120 120 120 GLN GLN B . n B 1 121 GLU 121 121 121 GLU GLU B . n B 1 122 GLY 122 122 122 GLY GLY B . n B 1 123 LEU 123 123 123 LEU LEU B . n B 1 124 GLN 124 124 124 GLN GLN B . n B 1 125 ARG 125 125 125 ARG ARG B . n B 1 126 LEU 126 126 126 LEU LEU B . n B 1 127 ASP 127 127 127 ASP ASP B . n B 1 128 GLN 128 128 128 GLN GLN B . n B 1 129 THR 129 129 129 THR THR B . n B 1 130 LEU 130 130 130 LEU LEU B . n B 1 131 ALA 131 131 131 ALA ALA B . n B 1 132 GLU 132 132 132 GLU GLU B . n B 1 133 LYS 133 133 133 LYS LYS B . n B 1 134 ASN 134 134 134 ASN ASN B . n B 1 135 ASN 135 135 135 ASN ASN B . n B 1 136 LEU 136 136 136 LEU LEU B . n B 1 137 GLN 137 137 137 GLN GLN B . n B 1 138 GLY 138 138 138 GLY GLY B . n B 1 139 LEU 139 139 139 LEU LEU B . n B 1 140 THR 140 140 140 THR THR B . n B 1 141 ARG 141 141 141 ARG ARG B . n B 1 142 GLU 142 142 142 GLU GLU B . n B 1 143 GLU 143 143 143 GLU GLU B . n B 1 144 PHE 144 144 144 PHE PHE B . n B 1 145 ASN 145 145 145 ASN ASN B . n B 1 146 SER 146 146 146 SER SER B . n B 1 147 GLU 147 147 147 GLU GLU B . n B 1 148 ALA 148 148 148 ALA ALA B . n B 1 149 ILE 149 149 149 ILE ILE B . n B 1 150 GLU 150 150 150 GLU GLU B . n B 1 151 LEU 151 151 151 LEU LEU B . n B 1 152 PHE 152 152 152 PHE PHE B . n B 1 153 ASN 153 153 153 ASN ASN B . n B 1 154 SER 154 154 154 SER SER B . n B 1 155 LEU 155 155 155 LEU LEU B . n B 1 156 ASN 156 156 156 ASN ASN B . n B 1 157 GLN 157 157 157 GLN GLN B . n B 1 158 LEU 158 158 158 LEU LEU B . n B 1 159 HIS 159 159 159 HIS HIS B . n B 1 160 PRO 160 160 160 PRO PRO B . n B 1 161 PHE 161 161 161 PHE PHE B . n B 1 162 ARG 162 162 162 ARG ARG B . n B 1 163 GLU 163 163 163 GLU GLU B . n B 1 164 GLY 164 164 164 GLY GLY B . n B 1 165 ASN 165 165 165 ASN ASN B . n B 1 166 GLY 166 166 166 GLY GLY B . n B 1 167 ARG 167 167 167 ARG ARG B . n B 1 168 THR 168 168 168 THR THR B . n B 1 169 GLN 169 169 169 GLN GLN B . n B 1 170 ARG 170 170 170 ARG ARG B . n B 1 171 LEU 171 171 171 LEU LEU B . n B 1 172 PHE 172 172 172 PHE PHE B . n B 1 173 PHE 173 173 173 PHE PHE B . n B 1 174 GLU 174 174 174 GLU GLU B . n B 1 175 ASN 175 175 175 ASN ASN B . n B 1 176 LEU 176 176 176 LEU LEU B . n B 1 177 ALA 177 177 177 ALA ALA B . n B 1 178 LYS 178 178 178 LYS LYS B . n B 1 179 ALA 179 179 179 ALA ALA B . n B 1 180 ALA 180 180 180 ALA ALA B . n B 1 181 GLY 181 181 181 GLY GLY B . n B 1 182 HIS 182 182 182 HIS HIS B . n B 1 183 GLN 183 183 183 GLN GLN B . n B 1 184 LEU 184 184 184 LEU LEU B . n B 1 185 ASN 185 185 185 ASN ASN B . n B 1 186 PHE 186 186 186 PHE PHE B . n B 1 187 SER 187 187 187 SER SER B . n B 1 188 LEU 188 188 188 LEU LEU B . n B 1 189 ILE 189 189 189 ILE ILE B . n B 1 190 THR 190 190 190 THR THR B . n B 1 191 LYS 191 191 191 LYS LYS B . n B 1 192 GLU 192 192 192 GLU GLU B . n B 1 193 ARG 193 193 193 ARG ARG B . n B 1 194 MET 194 194 194 MET MET B . n B 1 195 MET 195 195 195 MET MET B . n B 1 196 VAL 196 196 196 VAL VAL B . n B 1 197 ALA 197 197 197 ALA ALA B . n B 1 198 SER 198 198 198 SER SER B . n B 1 199 VAL 199 199 199 VAL VAL B . n B 1 200 ALA 200 200 200 ALA ALA B . n B 1 201 VAL 201 201 201 VAL VAL B . n B 1 202 ALA 202 202 202 ALA ALA B . n B 1 203 GLU 203 203 203 GLU GLU B . n B 1 204 ASN 204 204 204 ASN ASN B . n B 1 205 GLY 205 205 205 GLY GLY B . n B 1 206 ASP 206 206 206 ASP ASP B . n B 1 207 LEU 207 207 207 LEU LEU B . n B 1 208 GLU 208 208 208 GLU GLU B . n B 1 209 PRO 209 209 209 PRO PRO B . n B 1 210 MET 210 210 210 MET MET B . n B 1 211 GLN 211 211 211 GLN GLN B . n B 1 212 HIS 212 212 212 HIS HIS B . n B 1 213 LEU 213 213 213 LEU LEU B . n B 1 214 PHE 214 214 214 PHE PHE B . n B 1 215 GLU 215 215 215 GLU GLU B . n B 1 216 ASP 216 216 216 ASP ASP B . n B 1 217 ILE 217 217 217 ILE ILE B . n B 1 218 SER 218 218 218 SER SER B . n B 1 219 ASN 219 219 219 ASN ASN B . n B 1 220 PRO 220 220 220 PRO PRO B . n B 1 221 GLU 221 221 221 GLU GLU B . n B 1 222 LYS 222 222 222 LYS LYS B . n B 1 223 ILE 223 223 223 ILE ILE B . n B 1 224 ARG 224 224 224 ARG ARG B . n B 1 225 LEU 225 225 225 LEU LEU B . n B 1 226 LEU 226 226 226 LEU LEU B . n B 1 227 LYS 227 227 227 LYS LYS B . n B 1 228 GLU 228 228 228 GLU GLU B . n B 1 229 PHE 229 229 229 PHE PHE B . n B 1 230 MET 230 230 230 MET MET B . n B 1 231 HIS 231 231 231 HIS HIS B . n B 1 232 THR 232 232 232 THR THR B . n B 1 233 MET 233 233 233 MET MET B . n B 1 234 LYS 234 234 234 LYS LYS B . n B 1 235 ASN 235 235 235 ASN ASN B . n B 1 236 THR 236 236 236 THR THR B . n B 1 237 GLY 237 237 237 GLY GLY B . n B 1 238 ARG 238 238 238 ARG ARG B . n B 1 239 ASN 239 239 239 ASN ASN B . n B 1 240 VAL 240 240 240 VAL VAL B . n B 1 241 ASN 241 241 241 ASN ASN B . n B 1 242 ASP 242 242 242 ASP ASP B . n B 1 243 ARG 243 243 243 ARG ARG B . n B 1 244 PRO 244 244 244 PRO PRO B . n B 1 245 VAL 245 245 245 VAL VAL B . n B 1 246 MET 246 246 246 MET MET B . n B 1 247 VAL 247 247 247 VAL VAL B . n B 1 248 ALA 248 248 248 ALA ALA B . n B 1 249 LYS 249 249 249 LYS LYS B . n B 1 250 GLU 250 250 250 GLU GLU B . n B 1 251 GLY 251 251 251 GLY GLY B . n B 1 252 GLU 252 252 252 GLU GLU B . n B 1 253 THR 253 253 253 THR THR B . n B 1 254 TYR 254 254 254 TYR TYR B . n B 1 255 THR 255 255 255 THR THR B . n B 1 256 GLY 256 256 256 GLY GLY B . n B 1 257 THR 257 257 257 THR THR B . n B 1 258 TYR 258 258 258 TYR TYR B . n B 1 259 ARG 259 259 259 ARG ARG B . n B 1 260 GLY 260 260 260 GLY GLY B . n B 1 261 ALA 261 261 261 ALA ALA B . n B 1 262 GLY 262 262 262 GLY GLY B . n B 1 263 LEU 263 263 263 LEU LEU B . n B 1 264 GLU 264 264 264 GLU GLU B . n B 1 265 GLY 265 265 265 GLY GLY B . n B 1 266 PHE 266 266 266 PHE PHE B . n B 1 267 ALA 267 267 267 ALA ALA B . n B 1 268 LEU 268 268 268 LEU LEU B . n B 1 269 ASN 269 269 269 ASN ASN B . n B 1 270 VAL 270 270 270 VAL VAL B . n B 1 271 LYS 271 271 271 LYS LYS B . n B 1 272 GLY 272 272 272 GLY GLY B . n B 1 273 ALA 273 273 273 ALA ALA B . n B 1 274 TYR 274 274 274 TYR TYR B . n B 1 275 ILE 275 275 275 ILE ILE B . n B 1 276 ILE 276 276 276 ILE ILE B . n B 1 277 GLY 277 277 277 GLY GLY B . n B 1 278 ASN 278 278 278 ASN ASN B . n B 1 279 ILE 279 279 279 ILE ILE B . n B 1 280 ASP 280 280 280 ASP ASP B . n B 1 281 HIS 281 281 281 HIS HIS B . n B 1 282 LEU 282 282 282 LEU LEU B . n B 1 283 PRO 283 283 283 PRO PRO B . n B 1 284 PRO 284 284 284 PRO PRO B . n B 1 285 GLU 285 285 285 GLU GLU B . n B 1 286 GLN 286 286 286 GLN GLN B . n B 1 287 LEU 287 287 287 LEU LEU B . n B 1 288 LYS 288 288 288 LYS LYS B . n B 1 289 ILE 289 289 289 ILE ILE B . n B 1 290 LEU 290 290 290 LEU LEU B . n B 1 291 LYS 291 291 291 LYS LYS B . n B 1 292 PRO 292 292 292 PRO PRO B . n B 1 293 GLY 293 293 293 GLY GLY B . n B 1 294 ASP 294 294 294 ASP ASP B . n B 1 295 LYS 295 295 295 LYS LYS B . n B 1 296 ILE 296 296 296 ILE ILE B . n B 1 297 THR 297 297 297 THR THR B . n B 1 298 PHE 298 298 298 PHE PHE B . n B 1 299 THR 299 299 299 THR THR B . n B 1 300 ALA 300 300 300 ALA ALA B . n B 1 301 PRO 301 301 301 PRO PRO B . n B 1 302 LYS 302 302 302 LYS LYS B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NI 1 501 501 NI NI A . D 2 NI 1 502 502 NI NI A . E 3 ATP 1 701 701 ATP ATP A . F 4 MG 1 702 702 MG MG A . G 2 NI 1 501 501 NI NI B . H 2 NI 1 502 502 NI NI B . I 5 CL 1 601 601 CL CL B . J 6 HOH 1 2001 2001 HOH HOH A . J 6 HOH 2 2002 2002 HOH HOH A . J 6 HOH 3 2003 2003 HOH HOH A . J 6 HOH 4 2004 2004 HOH HOH A . K 6 HOH 1 2001 2001 HOH HOH B . K 6 HOH 2 2002 2002 HOH HOH B . K 6 HOH 3 2003 2003 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,F,J 2 1 B,G,H,I,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 17 ? A HIS 17 ? 1_555 NI ? C NI . ? A NI 501 ? 1_555 NE2 ? A HIS 18 ? A HIS 18 ? 1_555 94.8 ? 2 NE2 ? A HIS 17 ? A HIS 17 ? 1_555 NI ? C NI . ? A NI 501 ? 1_555 O ? J HOH . ? A HOH 2001 ? 1_555 116.9 ? 3 NE2 ? A HIS 18 ? A HIS 18 ? 1_555 NI ? C NI . ? A NI 501 ? 1_555 O ? J HOH . ? A HOH 2001 ? 1_555 121.0 ? 4 NE2 ? A HIS 45 ? A HIS 45 ? 1_555 NI ? D NI . ? A NI 502 ? 1_555 NZ ? A LYS 49 ? A LYS 49 ? 1_555 84.3 ? 5 NE2 ? A HIS 45 ? A HIS 45 ? 1_555 NI ? D NI . ? A NI 502 ? 1_555 O ? J HOH . ? A HOH 2003 ? 1_555 101.5 ? 6 NZ ? A LYS 49 ? A LYS 49 ? 1_555 NI ? D NI . ? A NI 502 ? 1_555 O ? J HOH . ? A HOH 2003 ? 1_555 74.0 ? 7 NE2 ? A HIS 45 ? A HIS 45 ? 1_555 NI ? D NI . ? A NI 502 ? 1_555 NE2 ? B HIS 231 ? B HIS 231 ? 1_555 115.2 ? 8 NZ ? A LYS 49 ? A LYS 49 ? 1_555 NI ? D NI . ? A NI 502 ? 1_555 NE2 ? B HIS 231 ? B HIS 231 ? 1_555 125.4 ? 9 O ? J HOH . ? A HOH 2003 ? 1_555 NI ? D NI . ? A NI 502 ? 1_555 NE2 ? B HIS 231 ? B HIS 231 ? 1_555 139.0 ? 10 NE2 ? A HIS 45 ? A HIS 45 ? 1_555 NI ? D NI . ? A NI 502 ? 1_555 O ? K HOH . ? B HOH 2003 ? 1_555 115.0 ? 11 NZ ? A LYS 49 ? A LYS 49 ? 1_555 NI ? D NI . ? A NI 502 ? 1_555 O ? K HOH . ? B HOH 2003 ? 1_555 124.1 ? 12 O ? J HOH . ? A HOH 2003 ? 1_555 NI ? D NI . ? A NI 502 ? 1_555 O ? K HOH . ? B HOH 2003 ? 1_555 51.5 ? 13 NE2 ? B HIS 231 ? B HIS 231 ? 1_555 NI ? D NI . ? A NI 502 ? 1_555 O ? K HOH . ? B HOH 2003 ? 1_555 94.5 ? 14 OE2 ? A GLU 163 ? A GLU 163 ? 1_555 MG ? F MG . ? A MG 702 ? 1_555 O3A ? E ATP . ? A ATP 701 ? 1_555 72.3 ? 15 OE2 ? A GLU 163 ? A GLU 163 ? 1_555 MG ? F MG . ? A MG 702 ? 1_555 O2G ? E ATP . ? A ATP 701 ? 1_555 94.6 ? 16 O3A ? E ATP . ? A ATP 701 ? 1_555 MG ? F MG . ? A MG 702 ? 1_555 O2G ? E ATP . ? A ATP 701 ? 1_555 76.8 ? 17 NE2 ? A HIS 231 ? A HIS 231 ? 1_555 NI ? H NI . ? B NI 502 ? 1_555 O ? J HOH . ? A HOH 2004 ? 1_555 95.0 ? 18 NE2 ? A HIS 231 ? A HIS 231 ? 1_555 NI ? H NI . ? B NI 502 ? 1_555 NE2 ? B HIS 45 ? B HIS 45 ? 1_555 112.2 ? 19 O ? J HOH . ? A HOH 2004 ? 1_555 NI ? H NI . ? B NI 502 ? 1_555 NE2 ? B HIS 45 ? B HIS 45 ? 1_555 125.9 ? 20 NE2 ? A HIS 231 ? A HIS 231 ? 1_555 NI ? H NI . ? B NI 502 ? 1_555 NZ ? B LYS 49 ? B LYS 49 ? 1_555 129.1 ? 21 O ? J HOH . ? A HOH 2004 ? 1_555 NI ? H NI . ? B NI 502 ? 1_555 NZ ? B LYS 49 ? B LYS 49 ? 1_555 105.4 ? 22 NE2 ? B HIS 45 ? B HIS 45 ? 1_555 NI ? H NI . ? B NI 502 ? 1_555 NZ ? B LYS 49 ? B LYS 49 ? 1_555 92.6 ? 23 NE2 ? B HIS 17 ? B HIS 17 ? 1_555 NI ? G NI . ? B NI 501 ? 1_555 NE2 ? B HIS 18 ? B HIS 18 ? 1_555 104.4 ? 24 NE2 ? B HIS 17 ? B HIS 17 ? 1_555 NI ? G NI . ? B NI 501 ? 1_555 O ? K HOH . ? B HOH 2002 ? 1_555 134.8 ? 25 NE2 ? B HIS 18 ? B HIS 18 ? 1_555 NI ? G NI . ? B NI 501 ? 1_555 O ? K HOH . ? B HOH 2002 ? 1_555 117.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-11-17 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2011-11-02 4 'Structure model' 1 3 2023-12-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Refinement description' 3 2 'Structure model' 'Version format compliance' 4 3 'Structure model' 'Database references' 5 3 'Structure model' Other 6 3 'Structure model' 'Refinement description' 7 4 'Structure model' Advisory 8 4 'Structure model' 'Data collection' 9 4 'Structure model' 'Database references' 10 4 'Structure model' 'Derived calculations' 11 4 'Structure model' Other 12 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_database_status 5 4 'Structure model' pdbx_initial_refinement_model 6 4 'Structure model' pdbx_struct_conn_angle 7 4 'Structure model' pdbx_unobs_or_zero_occ_atoms 8 4 'Structure model' struct_conn 9 4 'Structure model' struct_ncs_dom_lim 10 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.status_code_sf' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.value' 21 4 'Structure model' '_struct_conn.pdbx_dist_value' 22 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 23 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 24 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 25 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 26 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 27 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 28 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 29 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 30 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 31 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 32 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 33 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 34 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 35 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 36 4 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 37 4 'Structure model' '_struct_ncs_dom_lim.beg_label_asym_id' 38 4 'Structure model' '_struct_ncs_dom_lim.beg_label_comp_id' 39 4 'Structure model' '_struct_ncs_dom_lim.beg_label_seq_id' 40 4 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' 41 4 'Structure model' '_struct_ncs_dom_lim.end_label_asym_id' 42 4 'Structure model' '_struct_ncs_dom_lim.end_label_comp_id' 43 4 'Structure model' '_struct_ncs_dom_lim.end_label_seq_id' 44 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 45 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 46 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 11.2520 58.6920 49.1170 -0.2245 -0.2483 -0.0774 0.0103 -0.0166 -0.0047 1.9187 2.6720 3.9395 1.4178 -1.4854 -1.7031 -0.0495 -0.1113 -0.0754 -0.0508 -0.0820 0.0253 0.1646 0.2440 0.1315 'X-RAY DIFFRACTION' 2 ? refined 13.0790 57.2320 70.2250 -0.0263 0.0873 0.0905 -0.0638 0.0969 0.0246 3.0550 6.2845 2.2340 2.0837 2.5590 1.0824 0.1582 -0.2992 0.2638 0.4088 0.0946 -0.6650 -0.0765 0.6507 -0.2528 'X-RAY DIFFRACTION' 3 ? refined 17.4170 57.3400 86.3590 0.2889 0.7292 0.1507 -0.0257 -0.1337 -0.0014 9.6740 6.8666 4.8833 -0.7335 2.4002 -0.1113 -0.1276 -1.0011 0.2016 1.0129 0.0148 -0.1482 -0.0131 0.5944 0.1127 'X-RAY DIFFRACTION' 4 ? refined 21.5250 94.2920 84.5260 -0.1330 -0.2555 -0.0804 0.0191 0.0143 -0.0145 2.2678 4.5769 4.8670 -0.5189 0.5866 -0.2175 0.1117 -0.1234 -0.0584 -0.3135 -0.0626 0.2906 -0.2616 -0.0578 -0.0491 'X-RAY DIFFRACTION' 5 ? refined 23.4090 94.3690 63.1640 0.0281 -0.1562 0.0057 0.0217 -0.0696 0.0769 1.2181 6.0940 5.2964 0.2670 -0.1891 3.6994 0.2368 0.3518 -0.0298 -0.3076 -0.0279 -0.1221 -0.7984 0.1711 -0.2089 'X-RAY DIFFRACTION' 6 ? refined 26.4720 92.9970 47.2470 0.5440 0.5483 0.0231 0.1625 -0.0360 -0.0174 16.7805 8.0070 11.1992 -2.4527 0.4660 -0.9803 0.6209 2.7950 -0.1949 -1.9943 -0.7869 0.1658 -0.5049 -0.0145 0.1660 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 13 ? ? A 180 ? ? ? ? 'X-RAY DIFFRACTION' 2 1 A 501 ? ? A 502 ? ? ? ? 'X-RAY DIFFRACTION' 3 1 A 701 ? ? A 702 ? ? ? ? 'X-RAY DIFFRACTION' 4 1 A 2001 ? ? A 2004 ? ? ? ? 'X-RAY DIFFRACTION' 5 2 A 181 ? ? A 244 ? ? ? ? 'X-RAY DIFFRACTION' 6 3 A 245 ? ? A 302 ? ? ? ? 'X-RAY DIFFRACTION' 7 4 B 13 ? ? B 180 ? ? ? ? 'X-RAY DIFFRACTION' 8 4 B 501 ? ? B 502 ? ? ? ? 'X-RAY DIFFRACTION' 9 4 B 601 ? ? B 601 ? ? ? ? 'X-RAY DIFFRACTION' 10 5 B 181 ? ? B 244 ? ? ? ? 'X-RAY DIFFRACTION' 11 6 B 245 ? ? B 302 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 MOLREP phasing . ? 4 # _pdbx_entry_details.entry_id 2JK8 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;ADENOSINE-5'-TRIPHOSPHATE (ATP): ONLY TWO PHOSPHATES ARE VISIBLE IN THE DENSITY ; _pdbx_entry_details.sequence_details ;IN BOTH CHAINS, RESIDUES 1 TO 11 ARE MISSING DUE TO DISORDER AND RESIDUES 303 TO 544 ARE MISSING DUE TO PROTEOLYTIC CLEAVAGE AND - OR DISORDER. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 2003 ? ? O B HOH 2003 ? ? 2.00 2 1 O A HOH 2001 ? ? O A HOH 2002 ? ? 2.09 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 LEU _pdbx_validate_symm_contact.auth_seq_id_1 59 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 NH2 _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 ARG _pdbx_validate_symm_contact.auth_seq_id_2 243 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 4_466 _pdbx_validate_symm_contact.dist 2.16 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C A LYS 105 ? ? N A ARG 106 ? ? 1.195 1.336 -0.141 0.023 Y 2 1 C A ASN 111 ? ? N A ALA 112 ? ? 1.103 1.336 -0.233 0.023 Y 3 1 CD A ARG 125 ? ? NE A ARG 125 ? ? 1.213 1.460 -0.247 0.017 N 4 1 CB A VAL 240 ? ? CG2 A VAL 240 ? ? 1.659 1.524 0.135 0.021 N 5 1 CG A ARG 243 ? ? CD A ARG 243 ? ? 1.102 1.515 -0.413 0.025 N 6 1 CB A LYS 291 ? ? CG A LYS 291 ? ? 1.784 1.521 0.263 0.027 N 7 1 CB B GLU 103 ? ? CG B GLU 103 ? ? 1.713 1.517 0.196 0.019 N 8 1 C B MET 104 ? ? N B LYS 105 ? ? 1.057 1.336 -0.279 0.023 Y 9 1 CG B GLU 121 ? ? CD B GLU 121 ? ? 1.630 1.515 0.115 0.015 N 10 1 CD B ARG 125 ? ? NE B ARG 125 ? ? 1.890 1.460 0.430 0.017 N 11 1 CB B GLU 150 ? ? CG B GLU 150 ? ? 1.372 1.517 -0.145 0.019 N 12 1 CB B HIS 159 ? ? CG B HIS 159 ? ? 1.199 1.492 -0.293 0.016 N 13 1 CD B LYS 234 ? ? CE B LYS 234 ? ? 1.791 1.508 0.283 0.025 N 14 1 CB B GLU 285 ? ? CG B GLU 285 ? ? 1.399 1.517 -0.118 0.019 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CG A ARG 125 ? ? CD A ARG 125 ? ? NE A ARG 125 ? ? 133.44 111.80 21.64 2.10 N 2 1 CB A ARG 243 ? ? CG A ARG 243 ? ? CD A ARG 243 ? ? 131.55 111.60 19.95 2.60 N 3 1 NE A ARG 243 ? ? CZ A ARG 243 ? ? NH1 A ARG 243 ? ? 123.45 120.30 3.15 0.50 N 4 1 CB A LYS 295 ? ? CG A LYS 295 ? ? CD A LYS 295 ? ? 92.96 111.60 -18.64 2.60 N 5 1 CA B MET 104 ? ? C B MET 104 ? ? N B LYS 105 ? ? 133.34 117.20 16.14 2.20 Y 6 1 O B MET 104 ? ? C B MET 104 ? ? N B LYS 105 ? ? 104.24 122.70 -18.46 1.60 Y 7 1 CA B HIS 159 ? ? CB B HIS 159 ? ? CG B HIS 159 ? ? 141.80 113.60 28.20 1.70 N 8 1 CB B LYS 288 ? ? CG B LYS 288 ? ? CD B LYS 288 ? ? 95.57 111.60 -16.03 2.60 N 9 1 CB B LYS 302 ? ? CG B LYS 302 ? ? CD B LYS 302 ? ? 146.87 111.60 35.27 2.60 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 23 ? ? 66.22 -0.20 2 1 ASP A 64 ? ? -127.64 -169.46 3 1 GLU A 103 ? ? -87.53 -72.36 4 1 MET A 104 ? ? 103.82 -54.85 5 1 LYS A 105 ? ? 68.91 77.58 6 1 ILE A 289 ? ? -115.23 62.90 7 1 ILE B 13 ? ? -82.02 -72.66 8 1 MET B 104 ? ? -155.27 -113.12 9 1 ARG B 106 ? ? 91.71 50.17 10 1 HIS B 182 ? ? -114.83 -160.97 11 1 LEU B 184 ? ? -151.74 83.62 12 1 ILE B 289 ? ? -107.28 65.79 # loop_ _pdbx_validate_main_chain_plane.id _pdbx_validate_main_chain_plane.PDB_model_num _pdbx_validate_main_chain_plane.auth_comp_id _pdbx_validate_main_chain_plane.auth_asym_id _pdbx_validate_main_chain_plane.auth_seq_id _pdbx_validate_main_chain_plane.PDB_ins_code _pdbx_validate_main_chain_plane.label_alt_id _pdbx_validate_main_chain_plane.improper_torsion_angle 1 1 LYS A 105 ? ? 23.31 2 1 MET B 104 ? ? 10.46 # loop_ _pdbx_validate_polymer_linkage.id _pdbx_validate_polymer_linkage.PDB_model_num _pdbx_validate_polymer_linkage.auth_atom_id_1 _pdbx_validate_polymer_linkage.auth_asym_id_1 _pdbx_validate_polymer_linkage.auth_comp_id_1 _pdbx_validate_polymer_linkage.auth_seq_id_1 _pdbx_validate_polymer_linkage.PDB_ins_code_1 _pdbx_validate_polymer_linkage.label_alt_id_1 _pdbx_validate_polymer_linkage.auth_atom_id_2 _pdbx_validate_polymer_linkage.auth_asym_id_2 _pdbx_validate_polymer_linkage.auth_comp_id_2 _pdbx_validate_polymer_linkage.auth_seq_id_2 _pdbx_validate_polymer_linkage.PDB_ins_code_2 _pdbx_validate_polymer_linkage.label_alt_id_2 _pdbx_validate_polymer_linkage.dist 1 1 C A LYS 105 ? ? N A ARG 106 ? ? 1.20 2 1 C A ASN 111 ? ? N A ALA 112 ? ? 1.10 3 1 C B MET 104 ? ? N B LYS 105 ? ? 1.06 4 1 C B TRP 109 ? ? N B LYS 110 ? ? 1.75 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A GLU 121 ? CD ? A GLU 121 CD 2 1 Y 0 A GLU 121 ? OE1 ? A GLU 121 OE1 3 1 Y 0 A GLU 121 ? OE2 ? A GLU 121 OE2 4 1 Y 0 A ARG 125 ? NE ? A ARG 125 NE 5 1 Y 0 A ARG 125 ? CZ ? A ARG 125 CZ 6 1 Y 0 A ARG 125 ? NH1 ? A ARG 125 NH1 7 1 Y 0 A ARG 125 ? NH2 ? A ARG 125 NH2 8 1 Y 0 A LEU 126 ? CD1 ? A LEU 126 CD1 9 1 Y 0 A LEU 126 ? CD2 ? A LEU 126 CD2 10 1 Y 0 A GLU 142 ? CD ? A GLU 142 CD 11 1 Y 0 A GLU 142 ? OE1 ? A GLU 142 OE1 12 1 Y 0 A GLU 142 ? OE2 ? A GLU 142 OE2 13 1 Y 0 A LYS 178 ? CD ? A LYS 178 CD 14 1 Y 0 A LYS 178 ? CE ? A LYS 178 CE 15 1 Y 0 A LYS 178 ? NZ ? A LYS 178 NZ 16 1 Y 0 A LYS 191 ? CD ? A LYS 191 CD 17 1 Y 0 A LYS 191 ? CE ? A LYS 191 CE 18 1 Y 0 A LYS 191 ? NZ ? A LYS 191 NZ 19 1 Y 0 A LYS 227 ? CD ? A LYS 227 CD 20 1 Y 0 A LYS 227 ? CE ? A LYS 227 CE 21 1 Y 0 A LYS 227 ? NZ ? A LYS 227 NZ 22 1 Y 0 A LYS 234 ? CD ? A LYS 234 CD 23 1 Y 0 A LYS 234 ? CE ? A LYS 234 CE 24 1 Y 0 A LYS 234 ? NZ ? A LYS 234 NZ 25 1 Y 0 A ARG 238 ? CG ? A ARG 238 CG 26 1 Y 0 A ARG 238 ? CD ? A ARG 238 CD 27 1 Y 0 A ARG 238 ? NE ? A ARG 238 NE 28 1 Y 0 A ARG 238 ? CZ ? A ARG 238 CZ 29 1 Y 0 A ARG 238 ? NH1 ? A ARG 238 NH1 30 1 Y 0 A ARG 238 ? NH2 ? A ARG 238 NH2 31 1 Y 0 A VAL 240 ? CG1 ? A VAL 240 CG1 32 1 Y 0 A VAL 240 ? CG2 ? A VAL 240 CG2 33 1 Y 0 A ASP 242 ? CG ? A ASP 242 CG 34 1 Y 0 A ASP 242 ? OD1 ? A ASP 242 OD1 35 1 Y 0 A ASP 242 ? OD2 ? A ASP 242 OD2 36 1 Y 0 A ARG 243 ? CD ? A ARG 243 CD 37 1 Y 0 A ARG 243 ? NE ? A ARG 243 NE 38 1 Y 0 A ARG 243 ? CZ ? A ARG 243 CZ 39 1 Y 0 A ARG 243 ? NH1 ? A ARG 243 NH1 40 1 Y 0 A ARG 243 ? NH2 ? A ARG 243 NH2 41 1 Y 0 A ARG 259 ? CD ? A ARG 259 CD 42 1 Y 0 A ARG 259 ? NE ? A ARG 259 NE 43 1 Y 0 A ARG 259 ? CZ ? A ARG 259 CZ 44 1 Y 0 A ARG 259 ? NH1 ? A ARG 259 NH1 45 1 Y 0 A ARG 259 ? NH2 ? A ARG 259 NH2 46 1 Y 0 A LYS 271 ? CD ? A LYS 271 CD 47 1 Y 0 A LYS 271 ? CE ? A LYS 271 CE 48 1 Y 0 A LYS 271 ? NZ ? A LYS 271 NZ 49 1 Y 0 A LYS 288 ? CG ? A LYS 288 CG 50 1 Y 0 A LYS 288 ? CD ? A LYS 288 CD 51 1 Y 0 A LYS 288 ? CE ? A LYS 288 CE 52 1 Y 0 A LYS 288 ? NZ ? A LYS 288 NZ 53 1 Y 0 A LYS 291 ? CG ? A LYS 291 CG 54 1 Y 0 A LYS 291 ? CD ? A LYS 291 CD 55 1 Y 0 A LYS 291 ? CE ? A LYS 291 CE 56 1 Y 0 A LYS 291 ? NZ ? A LYS 291 NZ 57 1 Y 0 A LYS 295 ? CD ? A LYS 295 CD 58 1 Y 0 A LYS 295 ? CE ? A LYS 295 CE 59 1 Y 0 A LYS 295 ? NZ ? A LYS 295 NZ 60 1 Y 0 B LYS 42 ? CD ? B LYS 42 CD 61 1 Y 0 B LYS 42 ? CE ? B LYS 42 CE 62 1 Y 0 B LYS 42 ? NZ ? B LYS 42 NZ 63 1 Y 0 B LYS 77 ? CE ? B LYS 77 CE 64 1 Y 0 B LYS 77 ? NZ ? B LYS 77 NZ 65 1 Y 0 B GLU 103 ? CG ? B GLU 103 CG 66 1 Y 0 B GLU 103 ? CD ? B GLU 103 CD 67 1 Y 0 B GLU 103 ? OE1 ? B GLU 103 OE1 68 1 Y 0 B GLU 103 ? OE2 ? B GLU 103 OE2 69 1 Y 0 B LYS 110 ? CG ? B LYS 110 CG 70 1 Y 0 B LYS 110 ? CD ? B LYS 110 CD 71 1 Y 0 B LYS 110 ? CE ? B LYS 110 CE 72 1 Y 0 B LYS 110 ? NZ ? B LYS 110 NZ 73 1 Y 0 B GLU 118 ? CG ? B GLU 118 CG 74 1 Y 0 B GLU 118 ? CD ? B GLU 118 CD 75 1 Y 0 B GLU 118 ? OE1 ? B GLU 118 OE1 76 1 Y 0 B GLU 118 ? OE2 ? B GLU 118 OE2 77 1 Y 0 B GLU 121 ? CD ? B GLU 121 CD 78 1 Y 0 B GLU 121 ? OE1 ? B GLU 121 OE1 79 1 Y 0 B GLU 121 ? OE2 ? B GLU 121 OE2 80 1 Y 0 B ARG 125 ? NE ? B ARG 125 NE 81 1 Y 0 B ARG 125 ? CZ ? B ARG 125 CZ 82 1 Y 0 B ARG 125 ? NH1 ? B ARG 125 NH1 83 1 Y 0 B ARG 125 ? NH2 ? B ARG 125 NH2 84 1 Y 0 B GLU 142 ? CD ? B GLU 142 CD 85 1 Y 0 B GLU 142 ? OE1 ? B GLU 142 OE1 86 1 Y 0 B GLU 142 ? OE2 ? B GLU 142 OE2 87 1 Y 0 B GLU 150 ? CG ? B GLU 150 CG 88 1 Y 0 B GLU 150 ? CD ? B GLU 150 CD 89 1 Y 0 B GLU 150 ? OE1 ? B GLU 150 OE1 90 1 Y 0 B GLU 150 ? OE2 ? B GLU 150 OE2 91 1 Y 0 B HIS 159 ? CG ? B HIS 159 CG 92 1 Y 0 B HIS 159 ? ND1 ? B HIS 159 ND1 93 1 Y 0 B HIS 159 ? CD2 ? B HIS 159 CD2 94 1 Y 0 B HIS 159 ? CE1 ? B HIS 159 CE1 95 1 Y 0 B HIS 159 ? NE2 ? B HIS 159 NE2 96 1 Y 0 B LYS 178 ? CE ? B LYS 178 CE 97 1 Y 0 B LYS 178 ? NZ ? B LYS 178 NZ 98 1 Y 0 B LYS 191 ? CD ? B LYS 191 CD 99 1 Y 0 B LYS 191 ? CE ? B LYS 191 CE 100 1 Y 0 B LYS 191 ? NZ ? B LYS 191 NZ 101 1 Y 0 B LYS 227 ? CD ? B LYS 227 CD 102 1 Y 0 B LYS 227 ? CE ? B LYS 227 CE 103 1 Y 0 B LYS 227 ? NZ ? B LYS 227 NZ 104 1 Y 0 B LYS 234 ? CE ? B LYS 234 CE 105 1 Y 0 B LYS 234 ? NZ ? B LYS 234 NZ 106 1 Y 0 B LYS 249 ? CE ? B LYS 249 CE 107 1 Y 0 B LYS 249 ? NZ ? B LYS 249 NZ 108 1 Y 0 B ARG 259 ? CD ? B ARG 259 CD 109 1 Y 0 B ARG 259 ? NE ? B ARG 259 NE 110 1 Y 0 B ARG 259 ? CZ ? B ARG 259 CZ 111 1 Y 0 B ARG 259 ? NH1 ? B ARG 259 NH1 112 1 Y 0 B ARG 259 ? NH2 ? B ARG 259 NH2 113 1 Y 0 B LYS 271 ? CE ? B LYS 271 CE 114 1 Y 0 B LYS 271 ? NZ ? B LYS 271 NZ 115 1 Y 0 B GLU 285 ? CG ? B GLU 285 CG 116 1 Y 0 B GLU 285 ? CD ? B GLU 285 CD 117 1 Y 0 B GLU 285 ? OE1 ? B GLU 285 OE1 118 1 Y 0 B GLU 285 ? OE2 ? B GLU 285 OE2 119 1 Y 0 B LYS 288 ? CD ? B LYS 288 CD 120 1 Y 0 B LYS 288 ? CE ? B LYS 288 CE 121 1 Y 0 B LYS 288 ? NZ ? B LYS 288 NZ 122 1 Y 0 B ILE 289 ? CG1 ? B ILE 289 CG1 123 1 Y 0 B ILE 289 ? CG2 ? B ILE 289 CG2 124 1 Y 0 B ILE 289 ? CD1 ? B ILE 289 CD1 125 1 Y 0 B LYS 291 ? CG ? B LYS 291 CG 126 1 Y 0 B LYS 291 ? CD ? B LYS 291 CD 127 1 Y 0 B LYS 291 ? CE ? B LYS 291 CE 128 1 Y 0 B LYS 291 ? NZ ? B LYS 291 NZ 129 1 Y 0 B LYS 295 ? CD ? B LYS 295 CD 130 1 Y 0 B LYS 295 ? CE ? B LYS 295 CE 131 1 Y 0 B LYS 295 ? NZ ? B LYS 295 NZ 132 1 Y 0 B LYS 302 ? CD ? B LYS 302 CD 133 1 Y 0 B LYS 302 ? CE ? B LYS 302 CE 134 1 Y 0 B LYS 302 ? NZ ? B LYS 302 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A PRO 2 ? A PRO 2 3 1 Y 1 A LYS 3 ? A LYS 3 4 1 Y 1 A ALA 4 ? A ALA 4 5 1 Y 1 A LYS 5 ? A LYS 5 6 1 Y 1 A ALA 6 ? A ALA 6 7 1 Y 1 A LYS 7 ? A LYS 7 8 1 Y 1 A THR 8 ? A THR 8 9 1 Y 1 A LYS 9 ? A LYS 9 10 1 Y 1 A ASN 10 ? A ASN 10 11 1 Y 1 A THR 11 ? A THR 11 12 1 Y 0 A ARG 106 ? A ARG 106 13 1 Y 0 A THR 107 ? A THR 107 14 1 Y 0 A GLY 108 ? A GLY 108 15 1 Y 0 A TRP 109 ? A TRP 109 16 1 Y 0 A LYS 110 ? A LYS 110 17 1 Y 0 A ASN 111 ? A ASN 111 18 1 Y 1 B MET 1 ? B MET 1 19 1 Y 1 B PRO 2 ? B PRO 2 20 1 Y 1 B LYS 3 ? B LYS 3 21 1 Y 1 B ALA 4 ? B ALA 4 22 1 Y 1 B LYS 5 ? B LYS 5 23 1 Y 1 B ALA 6 ? B ALA 6 24 1 Y 1 B LYS 7 ? B LYS 7 25 1 Y 1 B THR 8 ? B THR 8 26 1 Y 1 B LYS 9 ? B LYS 9 27 1 Y 1 B ASN 10 ? B ASN 10 28 1 Y 1 B THR 11 ? B THR 11 29 1 Y 0 B LYS 105 ? B LYS 105 30 1 Y 0 B ARG 106 ? B ARG 106 31 1 Y 0 B THR 107 ? B THR 107 32 1 Y 0 B GLY 108 ? B GLY 108 33 1 Y 0 B TRP 109 ? B TRP 109 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 ATP PG P N N 74 ATP O1G O N N 75 ATP O2G O N N 76 ATP O3G O N N 77 ATP PB P N R 78 ATP O1B O N N 79 ATP O2B O N N 80 ATP O3B O N N 81 ATP PA P N R 82 ATP O1A O N N 83 ATP O2A O N N 84 ATP O3A O N N 85 ATP "O5'" O N N 86 ATP "C5'" C N N 87 ATP "C4'" C N R 88 ATP "O4'" O N N 89 ATP "C3'" C N S 90 ATP "O3'" O N N 91 ATP "C2'" C N R 92 ATP "O2'" O N N 93 ATP "C1'" C N R 94 ATP N9 N Y N 95 ATP C8 C Y N 96 ATP N7 N Y N 97 ATP C5 C Y N 98 ATP C6 C Y N 99 ATP N6 N N N 100 ATP N1 N Y N 101 ATP C2 C Y N 102 ATP N3 N Y N 103 ATP C4 C Y N 104 ATP HOG2 H N N 105 ATP HOG3 H N N 106 ATP HOB2 H N N 107 ATP HOA2 H N N 108 ATP "H5'1" H N N 109 ATP "H5'2" H N N 110 ATP "H4'" H N N 111 ATP "H3'" H N N 112 ATP "HO3'" H N N 113 ATP "H2'" H N N 114 ATP "HO2'" H N N 115 ATP "H1'" H N N 116 ATP H8 H N N 117 ATP HN61 H N N 118 ATP HN62 H N N 119 ATP H2 H N N 120 CL CL CL N N 121 CYS N N N N 122 CYS CA C N R 123 CYS C C N N 124 CYS O O N N 125 CYS CB C N N 126 CYS SG S N N 127 CYS OXT O N N 128 CYS H H N N 129 CYS H2 H N N 130 CYS HA H N N 131 CYS HB2 H N N 132 CYS HB3 H N N 133 CYS HG H N N 134 CYS HXT H N N 135 GLN N N N N 136 GLN CA C N S 137 GLN C C N N 138 GLN O O N N 139 GLN CB C N N 140 GLN CG C N N 141 GLN CD C N N 142 GLN OE1 O N N 143 GLN NE2 N N N 144 GLN OXT O N N 145 GLN H H N N 146 GLN H2 H N N 147 GLN HA H N N 148 GLN HB2 H N N 149 GLN HB3 H N N 150 GLN HG2 H N N 151 GLN HG3 H N N 152 GLN HE21 H N N 153 GLN HE22 H N N 154 GLN HXT H N N 155 GLU N N N N 156 GLU CA C N S 157 GLU C C N N 158 GLU O O N N 159 GLU CB C N N 160 GLU CG C N N 161 GLU CD C N N 162 GLU OE1 O N N 163 GLU OE2 O N N 164 GLU OXT O N N 165 GLU H H N N 166 GLU H2 H N N 167 GLU HA H N N 168 GLU HB2 H N N 169 GLU HB3 H N N 170 GLU HG2 H N N 171 GLU HG3 H N N 172 GLU HE2 H N N 173 GLU HXT H N N 174 GLY N N N N 175 GLY CA C N N 176 GLY C C N N 177 GLY O O N N 178 GLY OXT O N N 179 GLY H H N N 180 GLY H2 H N N 181 GLY HA2 H N N 182 GLY HA3 H N N 183 GLY HXT H N N 184 HIS N N N N 185 HIS CA C N S 186 HIS C C N N 187 HIS O O N N 188 HIS CB C N N 189 HIS CG C Y N 190 HIS ND1 N Y N 191 HIS CD2 C Y N 192 HIS CE1 C Y N 193 HIS NE2 N Y N 194 HIS OXT O N N 195 HIS H H N N 196 HIS H2 H N N 197 HIS HA H N N 198 HIS HB2 H N N 199 HIS HB3 H N N 200 HIS HD1 H N N 201 HIS HD2 H N N 202 HIS HE1 H N N 203 HIS HE2 H N N 204 HIS HXT H N N 205 HOH O O N N 206 HOH H1 H N N 207 HOH H2 H N N 208 ILE N N N N 209 ILE CA C N S 210 ILE C C N N 211 ILE O O N N 212 ILE CB C N S 213 ILE CG1 C N N 214 ILE CG2 C N N 215 ILE CD1 C N N 216 ILE OXT O N N 217 ILE H H N N 218 ILE H2 H N N 219 ILE HA H N N 220 ILE HB H N N 221 ILE HG12 H N N 222 ILE HG13 H N N 223 ILE HG21 H N N 224 ILE HG22 H N N 225 ILE HG23 H N N 226 ILE HD11 H N N 227 ILE HD12 H N N 228 ILE HD13 H N N 229 ILE HXT H N N 230 LEU N N N N 231 LEU CA C N S 232 LEU C C N N 233 LEU O O N N 234 LEU CB C N N 235 LEU CG C N N 236 LEU CD1 C N N 237 LEU CD2 C N N 238 LEU OXT O N N 239 LEU H H N N 240 LEU H2 H N N 241 LEU HA H N N 242 LEU HB2 H N N 243 LEU HB3 H N N 244 LEU HG H N N 245 LEU HD11 H N N 246 LEU HD12 H N N 247 LEU HD13 H N N 248 LEU HD21 H N N 249 LEU HD22 H N N 250 LEU HD23 H N N 251 LEU HXT H N N 252 LYS N N N N 253 LYS CA C N S 254 LYS C C N N 255 LYS O O N N 256 LYS CB C N N 257 LYS CG C N N 258 LYS CD C N N 259 LYS CE C N N 260 LYS NZ N N N 261 LYS OXT O N N 262 LYS H H N N 263 LYS H2 H N N 264 LYS HA H N N 265 LYS HB2 H N N 266 LYS HB3 H N N 267 LYS HG2 H N N 268 LYS HG3 H N N 269 LYS HD2 H N N 270 LYS HD3 H N N 271 LYS HE2 H N N 272 LYS HE3 H N N 273 LYS HZ1 H N N 274 LYS HZ2 H N N 275 LYS HZ3 H N N 276 LYS HXT H N N 277 MET N N N N 278 MET CA C N S 279 MET C C N N 280 MET O O N N 281 MET CB C N N 282 MET CG C N N 283 MET SD S N N 284 MET CE C N N 285 MET OXT O N N 286 MET H H N N 287 MET H2 H N N 288 MET HA H N N 289 MET HB2 H N N 290 MET HB3 H N N 291 MET HG2 H N N 292 MET HG3 H N N 293 MET HE1 H N N 294 MET HE2 H N N 295 MET HE3 H N N 296 MET HXT H N N 297 MG MG MG N N 298 NI NI NI N N 299 PHE N N N N 300 PHE CA C N S 301 PHE C C N N 302 PHE O O N N 303 PHE CB C N N 304 PHE CG C Y N 305 PHE CD1 C Y N 306 PHE CD2 C Y N 307 PHE CE1 C Y N 308 PHE CE2 C Y N 309 PHE CZ C Y N 310 PHE OXT O N N 311 PHE H H N N 312 PHE H2 H N N 313 PHE HA H N N 314 PHE HB2 H N N 315 PHE HB3 H N N 316 PHE HD1 H N N 317 PHE HD2 H N N 318 PHE HE1 H N N 319 PHE HE2 H N N 320 PHE HZ H N N 321 PHE HXT H N N 322 PRO N N N N 323 PRO CA C N S 324 PRO C C N N 325 PRO O O N N 326 PRO CB C N N 327 PRO CG C N N 328 PRO CD C N N 329 PRO OXT O N N 330 PRO H H N N 331 PRO HA H N N 332 PRO HB2 H N N 333 PRO HB3 H N N 334 PRO HG2 H N N 335 PRO HG3 H N N 336 PRO HD2 H N N 337 PRO HD3 H N N 338 PRO HXT H N N 339 SER N N N N 340 SER CA C N S 341 SER C C N N 342 SER O O N N 343 SER CB C N N 344 SER OG O N N 345 SER OXT O N N 346 SER H H N N 347 SER H2 H N N 348 SER HA H N N 349 SER HB2 H N N 350 SER HB3 H N N 351 SER HG H N N 352 SER HXT H N N 353 THR N N N N 354 THR CA C N S 355 THR C C N N 356 THR O O N N 357 THR CB C N R 358 THR OG1 O N N 359 THR CG2 C N N 360 THR OXT O N N 361 THR H H N N 362 THR H2 H N N 363 THR HA H N N 364 THR HB H N N 365 THR HG1 H N N 366 THR HG21 H N N 367 THR HG22 H N N 368 THR HG23 H N N 369 THR HXT H N N 370 TRP N N N N 371 TRP CA C N S 372 TRP C C N N 373 TRP O O N N 374 TRP CB C N N 375 TRP CG C Y N 376 TRP CD1 C Y N 377 TRP CD2 C Y N 378 TRP NE1 N Y N 379 TRP CE2 C Y N 380 TRP CE3 C Y N 381 TRP CZ2 C Y N 382 TRP CZ3 C Y N 383 TRP CH2 C Y N 384 TRP OXT O N N 385 TRP H H N N 386 TRP H2 H N N 387 TRP HA H N N 388 TRP HB2 H N N 389 TRP HB3 H N N 390 TRP HD1 H N N 391 TRP HE1 H N N 392 TRP HE3 H N N 393 TRP HZ2 H N N 394 TRP HZ3 H N N 395 TRP HH2 H N N 396 TRP HXT H N N 397 TYR N N N N 398 TYR CA C N S 399 TYR C C N N 400 TYR O O N N 401 TYR CB C N N 402 TYR CG C Y N 403 TYR CD1 C Y N 404 TYR CD2 C Y N 405 TYR CE1 C Y N 406 TYR CE2 C Y N 407 TYR CZ C Y N 408 TYR OH O N N 409 TYR OXT O N N 410 TYR H H N N 411 TYR H2 H N N 412 TYR HA H N N 413 TYR HB2 H N N 414 TYR HB3 H N N 415 TYR HD1 H N N 416 TYR HD2 H N N 417 TYR HE1 H N N 418 TYR HE2 H N N 419 TYR HH H N N 420 TYR HXT H N N 421 VAL N N N N 422 VAL CA C N S 423 VAL C C N N 424 VAL O O N N 425 VAL CB C N N 426 VAL CG1 C N N 427 VAL CG2 C N N 428 VAL OXT O N N 429 VAL H H N N 430 VAL H2 H N N 431 VAL HA H N N 432 VAL HB H N N 433 VAL HG11 H N N 434 VAL HG12 H N N 435 VAL HG13 H N N 436 VAL HG21 H N N 437 VAL HG22 H N N 438 VAL HG23 H N N 439 VAL HXT H N N 440 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 ATP PG O1G doub N N 70 ATP PG O2G sing N N 71 ATP PG O3G sing N N 72 ATP PG O3B sing N N 73 ATP O2G HOG2 sing N N 74 ATP O3G HOG3 sing N N 75 ATP PB O1B doub N N 76 ATP PB O2B sing N N 77 ATP PB O3B sing N N 78 ATP PB O3A sing N N 79 ATP O2B HOB2 sing N N 80 ATP PA O1A doub N N 81 ATP PA O2A sing N N 82 ATP PA O3A sing N N 83 ATP PA "O5'" sing N N 84 ATP O2A HOA2 sing N N 85 ATP "O5'" "C5'" sing N N 86 ATP "C5'" "C4'" sing N N 87 ATP "C5'" "H5'1" sing N N 88 ATP "C5'" "H5'2" sing N N 89 ATP "C4'" "O4'" sing N N 90 ATP "C4'" "C3'" sing N N 91 ATP "C4'" "H4'" sing N N 92 ATP "O4'" "C1'" sing N N 93 ATP "C3'" "O3'" sing N N 94 ATP "C3'" "C2'" sing N N 95 ATP "C3'" "H3'" sing N N 96 ATP "O3'" "HO3'" sing N N 97 ATP "C2'" "O2'" sing N N 98 ATP "C2'" "C1'" sing N N 99 ATP "C2'" "H2'" sing N N 100 ATP "O2'" "HO2'" sing N N 101 ATP "C1'" N9 sing N N 102 ATP "C1'" "H1'" sing N N 103 ATP N9 C8 sing Y N 104 ATP N9 C4 sing Y N 105 ATP C8 N7 doub Y N 106 ATP C8 H8 sing N N 107 ATP N7 C5 sing Y N 108 ATP C5 C6 sing Y N 109 ATP C5 C4 doub Y N 110 ATP C6 N6 sing N N 111 ATP C6 N1 doub Y N 112 ATP N6 HN61 sing N N 113 ATP N6 HN62 sing N N 114 ATP N1 C2 sing Y N 115 ATP C2 N3 doub Y N 116 ATP C2 H2 sing N N 117 ATP N3 C4 sing Y N 118 CYS N CA sing N N 119 CYS N H sing N N 120 CYS N H2 sing N N 121 CYS CA C sing N N 122 CYS CA CB sing N N 123 CYS CA HA sing N N 124 CYS C O doub N N 125 CYS C OXT sing N N 126 CYS CB SG sing N N 127 CYS CB HB2 sing N N 128 CYS CB HB3 sing N N 129 CYS SG HG sing N N 130 CYS OXT HXT sing N N 131 GLN N CA sing N N 132 GLN N H sing N N 133 GLN N H2 sing N N 134 GLN CA C sing N N 135 GLN CA CB sing N N 136 GLN CA HA sing N N 137 GLN C O doub N N 138 GLN C OXT sing N N 139 GLN CB CG sing N N 140 GLN CB HB2 sing N N 141 GLN CB HB3 sing N N 142 GLN CG CD sing N N 143 GLN CG HG2 sing N N 144 GLN CG HG3 sing N N 145 GLN CD OE1 doub N N 146 GLN CD NE2 sing N N 147 GLN NE2 HE21 sing N N 148 GLN NE2 HE22 sing N N 149 GLN OXT HXT sing N N 150 GLU N CA sing N N 151 GLU N H sing N N 152 GLU N H2 sing N N 153 GLU CA C sing N N 154 GLU CA CB sing N N 155 GLU CA HA sing N N 156 GLU C O doub N N 157 GLU C OXT sing N N 158 GLU CB CG sing N N 159 GLU CB HB2 sing N N 160 GLU CB HB3 sing N N 161 GLU CG CD sing N N 162 GLU CG HG2 sing N N 163 GLU CG HG3 sing N N 164 GLU CD OE1 doub N N 165 GLU CD OE2 sing N N 166 GLU OE2 HE2 sing N N 167 GLU OXT HXT sing N N 168 GLY N CA sing N N 169 GLY N H sing N N 170 GLY N H2 sing N N 171 GLY CA C sing N N 172 GLY CA HA2 sing N N 173 GLY CA HA3 sing N N 174 GLY C O doub N N 175 GLY C OXT sing N N 176 GLY OXT HXT sing N N 177 HIS N CA sing N N 178 HIS N H sing N N 179 HIS N H2 sing N N 180 HIS CA C sing N N 181 HIS CA CB sing N N 182 HIS CA HA sing N N 183 HIS C O doub N N 184 HIS C OXT sing N N 185 HIS CB CG sing N N 186 HIS CB HB2 sing N N 187 HIS CB HB3 sing N N 188 HIS CG ND1 sing Y N 189 HIS CG CD2 doub Y N 190 HIS ND1 CE1 doub Y N 191 HIS ND1 HD1 sing N N 192 HIS CD2 NE2 sing Y N 193 HIS CD2 HD2 sing N N 194 HIS CE1 NE2 sing Y N 195 HIS CE1 HE1 sing N N 196 HIS NE2 HE2 sing N N 197 HIS OXT HXT sing N N 198 HOH O H1 sing N N 199 HOH O H2 sing N N 200 ILE N CA sing N N 201 ILE N H sing N N 202 ILE N H2 sing N N 203 ILE CA C sing N N 204 ILE CA CB sing N N 205 ILE CA HA sing N N 206 ILE C O doub N N 207 ILE C OXT sing N N 208 ILE CB CG1 sing N N 209 ILE CB CG2 sing N N 210 ILE CB HB sing N N 211 ILE CG1 CD1 sing N N 212 ILE CG1 HG12 sing N N 213 ILE CG1 HG13 sing N N 214 ILE CG2 HG21 sing N N 215 ILE CG2 HG22 sing N N 216 ILE CG2 HG23 sing N N 217 ILE CD1 HD11 sing N N 218 ILE CD1 HD12 sing N N 219 ILE CD1 HD13 sing N N 220 ILE OXT HXT sing N N 221 LEU N CA sing N N 222 LEU N H sing N N 223 LEU N H2 sing N N 224 LEU CA C sing N N 225 LEU CA CB sing N N 226 LEU CA HA sing N N 227 LEU C O doub N N 228 LEU C OXT sing N N 229 LEU CB CG sing N N 230 LEU CB HB2 sing N N 231 LEU CB HB3 sing N N 232 LEU CG CD1 sing N N 233 LEU CG CD2 sing N N 234 LEU CG HG sing N N 235 LEU CD1 HD11 sing N N 236 LEU CD1 HD12 sing N N 237 LEU CD1 HD13 sing N N 238 LEU CD2 HD21 sing N N 239 LEU CD2 HD22 sing N N 240 LEU CD2 HD23 sing N N 241 LEU OXT HXT sing N N 242 LYS N CA sing N N 243 LYS N H sing N N 244 LYS N H2 sing N N 245 LYS CA C sing N N 246 LYS CA CB sing N N 247 LYS CA HA sing N N 248 LYS C O doub N N 249 LYS C OXT sing N N 250 LYS CB CG sing N N 251 LYS CB HB2 sing N N 252 LYS CB HB3 sing N N 253 LYS CG CD sing N N 254 LYS CG HG2 sing N N 255 LYS CG HG3 sing N N 256 LYS CD CE sing N N 257 LYS CD HD2 sing N N 258 LYS CD HD3 sing N N 259 LYS CE NZ sing N N 260 LYS CE HE2 sing N N 261 LYS CE HE3 sing N N 262 LYS NZ HZ1 sing N N 263 LYS NZ HZ2 sing N N 264 LYS NZ HZ3 sing N N 265 LYS OXT HXT sing N N 266 MET N CA sing N N 267 MET N H sing N N 268 MET N H2 sing N N 269 MET CA C sing N N 270 MET CA CB sing N N 271 MET CA HA sing N N 272 MET C O doub N N 273 MET C OXT sing N N 274 MET CB CG sing N N 275 MET CB HB2 sing N N 276 MET CB HB3 sing N N 277 MET CG SD sing N N 278 MET CG HG2 sing N N 279 MET CG HG3 sing N N 280 MET SD CE sing N N 281 MET CE HE1 sing N N 282 MET CE HE2 sing N N 283 MET CE HE3 sing N N 284 MET OXT HXT sing N N 285 PHE N CA sing N N 286 PHE N H sing N N 287 PHE N H2 sing N N 288 PHE CA C sing N N 289 PHE CA CB sing N N 290 PHE CA HA sing N N 291 PHE C O doub N N 292 PHE C OXT sing N N 293 PHE CB CG sing N N 294 PHE CB HB2 sing N N 295 PHE CB HB3 sing N N 296 PHE CG CD1 doub Y N 297 PHE CG CD2 sing Y N 298 PHE CD1 CE1 sing Y N 299 PHE CD1 HD1 sing N N 300 PHE CD2 CE2 doub Y N 301 PHE CD2 HD2 sing N N 302 PHE CE1 CZ doub Y N 303 PHE CE1 HE1 sing N N 304 PHE CE2 CZ sing Y N 305 PHE CE2 HE2 sing N N 306 PHE CZ HZ sing N N 307 PHE OXT HXT sing N N 308 PRO N CA sing N N 309 PRO N CD sing N N 310 PRO N H sing N N 311 PRO CA C sing N N 312 PRO CA CB sing N N 313 PRO CA HA sing N N 314 PRO C O doub N N 315 PRO C OXT sing N N 316 PRO CB CG sing N N 317 PRO CB HB2 sing N N 318 PRO CB HB3 sing N N 319 PRO CG CD sing N N 320 PRO CG HG2 sing N N 321 PRO CG HG3 sing N N 322 PRO CD HD2 sing N N 323 PRO CD HD3 sing N N 324 PRO OXT HXT sing N N 325 SER N CA sing N N 326 SER N H sing N N 327 SER N H2 sing N N 328 SER CA C sing N N 329 SER CA CB sing N N 330 SER CA HA sing N N 331 SER C O doub N N 332 SER C OXT sing N N 333 SER CB OG sing N N 334 SER CB HB2 sing N N 335 SER CB HB3 sing N N 336 SER OG HG sing N N 337 SER OXT HXT sing N N 338 THR N CA sing N N 339 THR N H sing N N 340 THR N H2 sing N N 341 THR CA C sing N N 342 THR CA CB sing N N 343 THR CA HA sing N N 344 THR C O doub N N 345 THR C OXT sing N N 346 THR CB OG1 sing N N 347 THR CB CG2 sing N N 348 THR CB HB sing N N 349 THR OG1 HG1 sing N N 350 THR CG2 HG21 sing N N 351 THR CG2 HG22 sing N N 352 THR CG2 HG23 sing N N 353 THR OXT HXT sing N N 354 TRP N CA sing N N 355 TRP N H sing N N 356 TRP N H2 sing N N 357 TRP CA C sing N N 358 TRP CA CB sing N N 359 TRP CA HA sing N N 360 TRP C O doub N N 361 TRP C OXT sing N N 362 TRP CB CG sing N N 363 TRP CB HB2 sing N N 364 TRP CB HB3 sing N N 365 TRP CG CD1 doub Y N 366 TRP CG CD2 sing Y N 367 TRP CD1 NE1 sing Y N 368 TRP CD1 HD1 sing N N 369 TRP CD2 CE2 doub Y N 370 TRP CD2 CE3 sing Y N 371 TRP NE1 CE2 sing Y N 372 TRP NE1 HE1 sing N N 373 TRP CE2 CZ2 sing Y N 374 TRP CE3 CZ3 doub Y N 375 TRP CE3 HE3 sing N N 376 TRP CZ2 CH2 doub Y N 377 TRP CZ2 HZ2 sing N N 378 TRP CZ3 CH2 sing Y N 379 TRP CZ3 HZ3 sing N N 380 TRP CH2 HH2 sing N N 381 TRP OXT HXT sing N N 382 TYR N CA sing N N 383 TYR N H sing N N 384 TYR N H2 sing N N 385 TYR CA C sing N N 386 TYR CA CB sing N N 387 TYR CA HA sing N N 388 TYR C O doub N N 389 TYR C OXT sing N N 390 TYR CB CG sing N N 391 TYR CB HB2 sing N N 392 TYR CB HB3 sing N N 393 TYR CG CD1 doub Y N 394 TYR CG CD2 sing Y N 395 TYR CD1 CE1 sing Y N 396 TYR CD1 HD1 sing N N 397 TYR CD2 CE2 doub Y N 398 TYR CD2 HD2 sing N N 399 TYR CE1 CZ doub Y N 400 TYR CE1 HE1 sing N N 401 TYR CE2 CZ sing Y N 402 TYR CE2 HE2 sing N N 403 TYR CZ OH sing N N 404 TYR OH HH sing N N 405 TYR OXT HXT sing N N 406 VAL N CA sing N N 407 VAL N H sing N N 408 VAL N H2 sing N N 409 VAL CA C sing N N 410 VAL CA CB sing N N 411 VAL CA HA sing N N 412 VAL C O doub N N 413 VAL C OXT sing N N 414 VAL CB CG1 sing N N 415 VAL CB CG2 sing N N 416 VAL CB HB sing N N 417 VAL CG1 HG11 sing N N 418 VAL CG1 HG12 sing N N 419 VAL CG1 HG13 sing N N 420 VAL CG2 HG21 sing N N 421 VAL CG2 HG22 sing N N 422 VAL CG2 HG23 sing N N 423 VAL OXT HXT sing N N 424 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'NICKEL (II) ION' NI 3 "ADENOSINE-5'-TRIPHOSPHATE" ATP 4 'MAGNESIUM ION' MG 5 'CHLORIDE ION' CL 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2VY3 _pdbx_initial_refinement_model.details 'PDB ENTRY 2VY3' #