HEADER OXIDOREDUCTASE 02-SEP-08 2JL1 TITLE STRUCTURAL INSIGHT INTO BIOREMEDIATION OF TRIPHENYLMETHANE DYES BY TITLE 2 CITROBACTER SP. TRIPHENYLMETHANE REDUCTASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRIPHENYLMETHANE REDUCTASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 2-287; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CITROBACTER SP. MY-5; SOURCE 3 ORGANISM_TAXID: 308866; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: ROSSETA GAMI (DE3) KEYWDS TRIPHENYLMETHANE REDUCTASE, OXIDOREDUCTASE, BIOREMEDIATION, KEYWDS 2 TRIPHENYLMETHANE EXPDTA X-RAY DIFFRACTION AUTHOR Y.KIM,H.J.PARK,S.N.KWAK,M.H.KIM REVDAT 5 13-DEC-23 2JL1 1 REMARK REVDAT 4 13-JUL-11 2JL1 1 VERSN REVDAT 3 24-FEB-09 2JL1 1 VERSN REVDAT 2 18-NOV-08 2JL1 1 JRNL REVDAT 1 23-SEP-08 2JL1 0 JRNL AUTH M.H.KIM,Y.KIM,H.J.PARK,J.S.LEE,S.N.KWAK,W.H.JUNG,S.G.LEE, JRNL AUTH 2 D.KIM,Y.C.LEE,T.K.OH JRNL TITL STRUCTURAL INSIGHT INTO BIOREMEDIATION OF TRIPHENYLMETHANE JRNL TITL 2 DYES BY CITROBACTER SP. TRIPHENYLMETHANE REDUCTASE JRNL REF J.BIOL.CHEM. V. 283 31981 2008 JRNL REFN ISSN 0021-9258 JRNL PMID 18782772 JRNL DOI 10.1074/JBC.M804092200 REMARK 2 REMARK 2 RESOLUTION. 1.96 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.96 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 3 NUMBER OF REFLECTIONS : 21246 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1142 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.96 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.01 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1284 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2230 REMARK 3 BIN FREE R VALUE SET COUNT : 73 REMARK 3 BIN FREE R VALUE : 0.3090 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2189 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 78 REMARK 3 SOLVENT ATOMS : 167 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.86000 REMARK 3 B22 (A**2) : -1.33000 REMARK 3 B33 (A**2) : -0.54000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.167 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.159 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.106 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.076 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.931 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2319 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3155 ; 1.379 ; 1.989 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 288 ; 5.829 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 94 ;39.019 ;25.319 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 372 ;14.352 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ; 9.537 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 372 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1690 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1071 ; 0.211 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1618 ; 0.301 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 150 ; 0.154 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 39 ; 0.200 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.252 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1471 ; 0.883 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2312 ; 1.304 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 949 ; 2.211 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 843 ; 3.432 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 287 REMARK 3 ORIGIN FOR THE GROUP (A): -5.8090 -18.9910 0.6390 REMARK 3 T TENSOR REMARK 3 T11: -0.0147 T22: -0.0708 REMARK 3 T33: -0.0552 T12: 0.0157 REMARK 3 T13: -0.0060 T23: -0.0328 REMARK 3 L TENSOR REMARK 3 L11: 0.9252 L22: 1.0808 REMARK 3 L33: 0.6919 L12: -0.1800 REMARK 3 L13: 0.3582 L23: -0.1536 REMARK 3 S TENSOR REMARK 3 S11: 0.0247 S12: 0.0979 S13: -0.1053 REMARK 3 S21: -0.0628 S22: 0.0074 S23: 0.0135 REMARK 3 S31: 0.1077 S32: 0.0617 S33: -0.0320 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2JL1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-SEP-08. REMARK 100 THE DEPOSITION ID IS D_1290037383. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUL-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 6C1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.23985 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22401 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.960 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -0.500 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 200 DATA REDUNDANCY : 11.70 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 28.8500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.96 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 83.3 REMARK 200 DATA REDUNDANCY IN SHELL : 7.80 REMARK 200 R MERGE FOR SHELL (I) : 0.40000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.810 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2VRB REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.05 M KH2PO4, 18% PEG8000, 10 MM REMARK 280 NADP, PH 8 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 38.04800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 38.04800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 29.63100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 70.19200 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 29.63100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 70.19200 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 38.04800 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 29.63100 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 70.19200 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 38.04800 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 29.63100 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 70.19200 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 TOTAL BURIED SURFACE AREA: 2240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 38.04800 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2025 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2069 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2146 LIES ON A SPECIAL POSITION. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP A1288 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1289 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1290 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1291 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1292 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1293 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2VRB RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE CITROBACTER SP. TRIPHENYLMETHANE REDUCTASE REMARK 900 COMPLEXED WITH NADP( H) REMARK 900 RELATED ID: 2VRC RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE CITROBACTER SP. TRIPHENYLMETHANE REDUCTASE REMARK 900 COMPLEXED WITH NADP( H) REMARK 999 REMARK 999 SEQUENCE REMARK 999 MET1 WAS REPLACED WITH PHENYLALANINE IN THE COORDINATE REMARK 999 FILE BECAUSE OF CLONING PROCEDURE. DBREF 2JL1 A 1 1 PDB 2JL1 2JL1 1 1 DBREF 2JL1 A 2 287 UNP Q2TNI4 Q2TNI4_9ENTR 2 287 SEQADV 2JL1 THR A 156 UNP Q2TNI4 ILE 156 CONFLICT SEQADV 2JL1 THR A 245 UNP Q2TNI4 ALA 245 CONFLICT SEQRES 1 A 287 PHE SER ILE ALA VAL THR GLY ALA THR GLY GLN LEU GLY SEQRES 2 A 287 GLY LEU VAL ILE GLN HIS LEU LEU LYS LYS VAL PRO ALA SEQRES 3 A 287 SER GLN ILE ILE ALA ILE VAL ARG ASN VAL GLU LYS ALA SEQRES 4 A 287 SER THR LEU ALA ASP GLN GLY VAL GLU VAL ARG HIS GLY SEQRES 5 A 287 ASP TYR ASN GLN PRO GLU SER LEU GLN LYS ALA PHE ALA SEQRES 6 A 287 GLY VAL SER LYS LEU LEU PHE ILE SER GLY PRO HIS TYR SEQRES 7 A 287 ASP ASN THR LEU LEU ILE VAL GLN HIS ALA ASN VAL VAL SEQRES 8 A 287 LYS ALA ALA ARG ASP ALA GLY VAL LYS HIS ILE ALA TYR SEQRES 9 A 287 THR GLY TYR ALA PHE ALA GLU GLU SER ILE ILE PRO LEU SEQRES 10 A 287 ALA HIS VAL HIS LEU ALA THR GLU TYR ALA ILE ARG THR SEQRES 11 A 287 THR ASN ILE PRO TYR THR PHE LEU ARG ASN ALA LEU TYR SEQRES 12 A 287 THR ASP PHE PHE VAL ASN GLU GLY LEU ARG ALA SER THR SEQRES 13 A 287 GLU SER GLY ALA ILE VAL THR ASN ALA GLY SER GLY ILE SEQRES 14 A 287 VAL ASN SER VAL THR ARG ASN GLU LEU ALA LEU ALA ALA SEQRES 15 A 287 ALA THR VAL LEU THR GLU GLU GLY HIS GLU ASN LYS THR SEQRES 16 A 287 TYR ASN LEU VAL SER ASN GLN PRO TRP THR PHE ASP GLU SEQRES 17 A 287 LEU ALA GLN ILE LEU SER GLU VAL SER GLY LYS LYS VAL SEQRES 18 A 287 VAL HIS GLN PRO VAL SER PHE GLU GLU GLU LYS ASN PHE SEQRES 19 A 287 LEU VAL ASN ALA GLY VAL PRO GLU PRO PHE THR GLU ILE SEQRES 20 A 287 THR ALA ALA ILE TYR ASP ALA ILE SER LYS GLY GLU ALA SEQRES 21 A 287 SER LYS THR SER ASP ASP LEU GLN LYS LEU ILE GLY SER SEQRES 22 A 287 LEU THR PRO LEU LYS GLU THR VAL LYS GLN ALA LEU LYS SEQRES 23 A 287 MET HET NAP A1288 48 HET GOL A1289 12 HET GOL A1290 6 HET GOL A1291 6 HET GOL A1292 6 HET GOL A1293 6 HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETNAM GOL GLYCEROL HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 NAP C21 H28 N7 O17 P3 FORMUL 3 GOL 5(C3 H8 O3) FORMUL 8 HOH *167(H2 O) HELIX 1 1 GLY A 10 LEU A 21 1 12 HELIX 2 2 PRO A 25 SER A 27 5 3 HELIX 3 3 ALA A 39 GLN A 45 1 7 HELIX 4 4 GLN A 56 PHE A 64 1 9 HELIX 5 5 ASP A 79 ALA A 97 1 19 HELIX 6 6 PHE A 109 SER A 113 5 5 HELIX 7 7 PRO A 116 THR A 131 1 16 HELIX 8 8 TYR A 143 VAL A 148 1 6 HELIX 9 9 ASN A 149 GLY A 151 5 3 HELIX 10 10 LEU A 152 GLY A 159 1 8 HELIX 11 11 THR A 174 THR A 187 1 14 HELIX 12 12 THR A 205 GLY A 218 1 14 HELIX 13 13 SER A 227 ALA A 238 1 12 HELIX 14 14 PRO A 241 LYS A 257 1 17 HELIX 15 15 ASP A 265 GLY A 272 1 8 HELIX 16 16 PRO A 276 LYS A 286 1 11 SHEET 1 AA 7 GLU A 48 HIS A 51 0 SHEET 2 AA 7 ILE A 29 VAL A 33 1 O ILE A 29 N GLU A 48 SHEET 3 AA 7 ILE A 3 VAL A 5 1 O ILE A 3 N ILE A 30 SHEET 4 AA 7 LYS A 69 PHE A 72 1 O LYS A 69 N ALA A 4 SHEET 5 AA 7 HIS A 101 TYR A 107 1 O HIS A 101 N LEU A 70 SHEET 6 AA 7 TYR A 135 ASN A 140 1 O THR A 136 N TYR A 104 SHEET 7 AA 7 LYS A 194 LEU A 198 1 O LYS A 194 N PHE A 137 SHEET 1 AB 2 ALA A 160 THR A 163 0 SHEET 2 AB 2 VAL A 222 PRO A 225 1 O VAL A 222 N ILE A 161 SITE 1 AC1 27 GLY A 7 THR A 9 GLY A 10 GLN A 11 SITE 2 AC1 27 LEU A 12 ARG A 34 LYS A 38 GLY A 52 SITE 3 AC1 27 ASP A 53 TYR A 54 ASN A 55 ILE A 73 SITE 4 AC1 27 SER A 74 GLY A 75 PRO A 76 HIS A 77 SITE 5 AC1 27 ALA A 141 LEU A 142 TYR A 143 ARG A 175 SITE 6 AC1 27 HOH A2003 HOH A2006 HOH A2007 HOH A2011 SITE 7 AC1 27 HOH A2031 HOH A2162 HOH A2164 SITE 1 AC2 10 THR A 144 SER A 172 VAL A 173 GLU A 177 SITE 2 AC2 10 SER A 200 GLN A 202 THR A 275 HOH A2118 SITE 3 AC2 10 HOH A2159 HOH A2165 SITE 1 AC3 5 GLU A 111 LEU A 122 GLU A 125 TYR A 126 SITE 2 AC3 5 ARG A 129 SITE 1 AC4 8 LYS A 69 HIS A 101 THR A 136 VAL A 185 SITE 2 AC4 8 GLU A 188 GLY A 190 HIS A 191 GLU A 192 SITE 1 AC5 10 TYR A 107 ALA A 108 PHE A 109 ALA A 141 SITE 2 AC5 10 LEU A 142 ASN A 171 GLU A 259 ALA A 260 SITE 3 AC5 10 HOH A2142 HOH A2167 SITE 1 AC6 7 TYR A 78 ASP A 79 ASN A 80 THR A 81 SITE 2 AC6 7 ARG A 95 THR A 130 THR A 131 CRYST1 59.262 140.384 76.096 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016874 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007123 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013141 0.00000