data_2JN5 # _entry.id 2JN5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2JN5 pdb_00002jn5 10.2210/pdb2jn5/pdb RCSB RCSB100041 ? ? WWPDB D_1000100041 ? ? BMRB 15095 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-01-22 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2020-02-05 4 'Structure model' 1 3 2023-06-14 5 'Structure model' 1 4 2023-12-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Experimental preparation' 6 3 'Structure model' Other 7 3 'Structure model' 'Source and taxonomy' 8 4 'Structure model' 'Database references' 9 4 'Structure model' Other 10 5 'Structure model' 'Data collection' 11 5 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_database_status 3 3 'Structure model' pdbx_entity_src_syn 4 3 'Structure model' pdbx_nmr_sample_details 5 3 'Structure model' pdbx_nmr_software 6 3 'Structure model' pdbx_struct_assembly 7 3 'Structure model' pdbx_struct_oper_list 8 4 'Structure model' database_2 9 4 'Structure model' pdbx_database_status 10 5 'Structure model' chem_comp_atom 11 5 'Structure model' chem_comp_bond 12 5 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_pdbx_database_status.status_code_cs' 2 3 'Structure model' '_pdbx_entity_src_syn.details' 3 3 'Structure model' '_pdbx_entity_src_syn.ncbi_taxonomy_id' 4 3 'Structure model' '_pdbx_entity_src_syn.organism_common_name' 5 3 'Structure model' '_pdbx_entity_src_syn.organism_scientific' 6 3 'Structure model' '_pdbx_nmr_sample_details.contents' 7 3 'Structure model' '_pdbx_nmr_software.name' 8 4 'Structure model' '_database_2.pdbx_DOI' 9 4 'Structure model' '_database_2.pdbx_database_accession' 10 4 'Structure model' '_pdbx_database_status.status_code_nmr_data' 11 5 'Structure model' '_pdbx_database_status.deposit_site' # _pdbx_database_status.deposit_site RCSB _pdbx_database_status.entry_id 2JN5 _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2006-12-28 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data REL # _pdbx_database_related.db_name BMRB _pdbx_database_related.db_id 15095 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zhou, C.J.' 1 'Hu, H.Y.' 2 'Lin, D.H.' 3 # _citation.id primary _citation.title 'Interaction with synphilin-1 promotes inclusion formation of alpha-synuclein: mechanistic insights and pathological implication.' _citation.journal_abbrev 'Faseb J.' _citation.journal_volume 24 _citation.page_first 196 _citation.page_last 205 _citation.year 2010 _citation.journal_id_ASTM FAJOEC _citation.country US _citation.journal_id_ISSN 0892-6638 _citation.journal_id_CSD 2074 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19762560 _citation.pdbx_database_id_DOI 10.1096/fj.09-133082 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Xie, Y.Y.' 1 ? primary 'Zhou, C.J.' 2 ? primary 'Zhou, Z.R.' 3 ? primary 'Hong, J.' 4 ? primary 'Che, M.X.' 5 ? primary 'Fu, Q.S.' 6 ? primary 'Song, A.X.' 7 ? primary 'Lin, D.H.' 8 ? primary 'Hu, H.Y.' 9 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description Alpha-synuclein _entity.formula_weight 1357.704 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'residues 1-12' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Non-A beta component of AD amyloid, Non-A4 component of amyloid precursor, NACP' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code MDVFMKGLSKAK _entity_poly.pdbx_seq_one_letter_code_can MDVFMKGLSKAK _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASP n 1 3 VAL n 1 4 PHE n 1 5 MET n 1 6 LYS n 1 7 GLY n 1 8 LEU n 1 9 SER n 1 10 LYS n 1 11 ALA n 1 12 LYS n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name Human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 ASP 2 2 2 ASP ASP A . n A 1 3 VAL 3 3 3 VAL VAL A . n A 1 4 PHE 4 4 4 PHE PHE A . n A 1 5 MET 5 5 5 MET MET A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 SER 9 9 9 SER SER A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 LYS 12 12 12 LYS LYS A . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2JN5 _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 2JN5 _struct.title 'Solution Structure of a Dodecapeptide from Alpha-Synuclein Bound with Synphilin-1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2JN5 _struct_keywords.pdbx_keywords 'LIPID BINDING PROTEIN, PROTEIN FIBRIL' _struct_keywords.text 'Alpha-Synuclein, N-terminus, dodecapeptide, Synphilin-1, LIPID BINDING PROTEIN, PROTEIN FIBRIL' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_code SYUA_HUMAN _struct_ref.db_name UNP _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P37840 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code MDVFMKGLSKAK _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2JN5 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 12 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P37840 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 12 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 12 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 2 ? ? -151.30 81.11 2 1 VAL A 3 ? ? -152.78 -17.58 3 1 LEU A 8 ? ? -153.89 -41.45 4 1 SER A 9 ? ? -172.64 -35.23 5 1 LYS A 10 ? ? 48.81 78.69 6 2 VAL A 3 ? ? -159.29 -22.25 7 2 LEU A 8 ? ? -157.87 -34.79 8 2 SER A 9 ? ? -172.82 -40.64 9 2 LYS A 10 ? ? 52.48 78.01 10 3 VAL A 3 ? ? -152.35 -19.57 11 3 LEU A 8 ? ? -160.52 -38.08 12 3 SER A 9 ? ? -172.72 -45.21 13 4 VAL A 3 ? ? -157.75 -18.30 14 4 LEU A 8 ? ? -155.64 -39.49 15 4 SER A 9 ? ? -165.94 -43.47 16 4 LYS A 10 ? ? 52.66 82.08 17 5 VAL A 3 ? ? -151.39 -18.71 18 5 LEU A 8 ? ? -154.56 -43.25 19 5 SER A 9 ? ? -163.61 -39.46 20 5 LYS A 10 ? ? 52.64 79.85 21 6 ASP A 2 ? ? -150.70 73.53 22 6 VAL A 3 ? ? -140.42 -19.45 23 6 LEU A 8 ? ? -148.32 -44.29 24 6 SER A 9 ? ? -164.90 -35.57 25 6 LYS A 10 ? ? 51.41 83.24 26 7 VAL A 3 ? ? -159.16 -20.49 27 7 LEU A 8 ? ? -156.60 -41.64 28 7 SER A 9 ? ? -160.89 -41.59 29 7 LYS A 10 ? ? 51.89 74.95 30 8 ASP A 2 ? ? -150.97 87.96 31 8 VAL A 3 ? ? -157.39 -20.11 32 8 LEU A 8 ? ? -145.22 -42.10 33 8 SER A 9 ? ? -178.35 -34.24 34 8 LYS A 10 ? ? 53.88 88.09 35 9 ASP A 2 ? ? -150.66 83.63 36 9 VAL A 3 ? ? -151.39 -20.66 37 9 LEU A 8 ? ? -161.58 -47.33 38 9 SER A 9 ? ? -164.65 -40.04 39 9 LYS A 10 ? ? 53.11 83.50 40 10 VAL A 3 ? ? -148.60 -17.19 41 10 LEU A 8 ? ? -159.42 -35.33 42 10 SER A 9 ? ? -161.00 -48.37 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 250 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2JN5 _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_ensemble_rms.atom_type ? _pdbx_nmr_ensemble_rms.bond_angle_rms_dev ? _pdbx_nmr_ensemble_rms.bond_angle_rms_dev_error ? _pdbx_nmr_ensemble_rms.chain_range_begin ? _pdbx_nmr_ensemble_rms.chain_range_end ? _pdbx_nmr_ensemble_rms.coord_average_rmsd_method ? _pdbx_nmr_ensemble_rms.covalent_bond_rms_dev ? _pdbx_nmr_ensemble_rms.covalent_bond_rms_dev_error ? _pdbx_nmr_ensemble_rms.dihedral_angles_rms_dev ? _pdbx_nmr_ensemble_rms.dihedral_angles_rms_dev_error ? _pdbx_nmr_ensemble_rms.distance_rms_dev 0.016 _pdbx_nmr_ensemble_rms.distance_rms_dev_error 0.002 _pdbx_nmr_ensemble_rms.entry_id 2JN5 _pdbx_nmr_ensemble_rms.improper_torsion_angle_rms_dev ? _pdbx_nmr_ensemble_rms.improper_torsion_angle_rms_dev_error ? _pdbx_nmr_ensemble_rms.peptide_planarity_rms_dev ? _pdbx_nmr_ensemble_rms.peptide_planarity_rms_dev_error ? _pdbx_nmr_ensemble_rms.residue_range_begin ? _pdbx_nmr_ensemble_rms.residue_range_end ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2JN5 _pdbx_nmr_representative.selection_criteria 'lowest energy' # _pdbx_nmr_sample_details.contents '1 mM entity, 20 mM sodium phosphate, 50 mM sodium chloride, 0.1 mM Synphilin-1, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id entity 1 mM ? 1 'sodium phosphate' 20 mM ? 1 'sodium chloride' 50 mM ? 1 Synphilin-1 0.1 mM ? 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-1H TOCSY' 1 2 1 '2D 1H-1H NOESY' # _pdbx_nmr_constraints.disulfide_bond_constraints_total_count ? _pdbx_nmr_constraints.entry_id 2JN5 _pdbx_nmr_constraints.hydrogen_bond_constraints_total_count ? _pdbx_nmr_constraints.NA_alpha-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_beta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_chi-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_delta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_epsilon-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_gamma-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_other-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_sugar_pucker_constraints_total_count ? _pdbx_nmr_constraints.NOE_constraints_total 123 _pdbx_nmr_constraints.NOE_interentity_total_count ? _pdbx_nmr_constraints.NOE_interproton_distance_evaluation ? _pdbx_nmr_constraints.NOE_intraresidue_total_count 89 _pdbx_nmr_constraints.NOE_long_range_total_count 1 _pdbx_nmr_constraints.NOE_medium_range_total_count 11 _pdbx_nmr_constraints.NOE_motional_averaging_correction ? _pdbx_nmr_constraints.NOE_pseudoatom_corrections ? _pdbx_nmr_constraints.NOE_sequential_total_count 22 _pdbx_nmr_constraints.protein_chi_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_other_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_phi_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_psi_angle_constraints_total_count ? # _pdbx_nmr_refine.details ? _pdbx_nmr_refine.entry_id 2JN5 _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRDraw 2.3 1 Goddard 'peak picking' Sparky 3.110 2 Goddard 'chemical shift assignment' Sparky 3.110 3 ;Linge, O'Donoghue and Nilges ; 'data analysis' ARIA 2.0 4 ;Linge, O'Donoghue and Nilges ; 'structure solution' ARIA 2.0 5 ;Linge, O'Donoghue and Nilges ; refinement ARIA 2.0 6 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ASP N N N N 14 ASP CA C N S 15 ASP C C N N 16 ASP O O N N 17 ASP CB C N N 18 ASP CG C N N 19 ASP OD1 O N N 20 ASP OD2 O N N 21 ASP OXT O N N 22 ASP H H N N 23 ASP H2 H N N 24 ASP HA H N N 25 ASP HB2 H N N 26 ASP HB3 H N N 27 ASP HD2 H N N 28 ASP HXT H N N 29 GLY N N N N 30 GLY CA C N N 31 GLY C C N N 32 GLY O O N N 33 GLY OXT O N N 34 GLY H H N N 35 GLY H2 H N N 36 GLY HA2 H N N 37 GLY HA3 H N N 38 GLY HXT H N N 39 LEU N N N N 40 LEU CA C N S 41 LEU C C N N 42 LEU O O N N 43 LEU CB C N N 44 LEU CG C N N 45 LEU CD1 C N N 46 LEU CD2 C N N 47 LEU OXT O N N 48 LEU H H N N 49 LEU H2 H N N 50 LEU HA H N N 51 LEU HB2 H N N 52 LEU HB3 H N N 53 LEU HG H N N 54 LEU HD11 H N N 55 LEU HD12 H N N 56 LEU HD13 H N N 57 LEU HD21 H N N 58 LEU HD22 H N N 59 LEU HD23 H N N 60 LEU HXT H N N 61 LYS N N N N 62 LYS CA C N S 63 LYS C C N N 64 LYS O O N N 65 LYS CB C N N 66 LYS CG C N N 67 LYS CD C N N 68 LYS CE C N N 69 LYS NZ N N N 70 LYS OXT O N N 71 LYS H H N N 72 LYS H2 H N N 73 LYS HA H N N 74 LYS HB2 H N N 75 LYS HB3 H N N 76 LYS HG2 H N N 77 LYS HG3 H N N 78 LYS HD2 H N N 79 LYS HD3 H N N 80 LYS HE2 H N N 81 LYS HE3 H N N 82 LYS HZ1 H N N 83 LYS HZ2 H N N 84 LYS HZ3 H N N 85 LYS HXT H N N 86 MET N N N N 87 MET CA C N S 88 MET C C N N 89 MET O O N N 90 MET CB C N N 91 MET CG C N N 92 MET SD S N N 93 MET CE C N N 94 MET OXT O N N 95 MET H H N N 96 MET H2 H N N 97 MET HA H N N 98 MET HB2 H N N 99 MET HB3 H N N 100 MET HG2 H N N 101 MET HG3 H N N 102 MET HE1 H N N 103 MET HE2 H N N 104 MET HE3 H N N 105 MET HXT H N N 106 PHE N N N N 107 PHE CA C N S 108 PHE C C N N 109 PHE O O N N 110 PHE CB C N N 111 PHE CG C Y N 112 PHE CD1 C Y N 113 PHE CD2 C Y N 114 PHE CE1 C Y N 115 PHE CE2 C Y N 116 PHE CZ C Y N 117 PHE OXT O N N 118 PHE H H N N 119 PHE H2 H N N 120 PHE HA H N N 121 PHE HB2 H N N 122 PHE HB3 H N N 123 PHE HD1 H N N 124 PHE HD2 H N N 125 PHE HE1 H N N 126 PHE HE2 H N N 127 PHE HZ H N N 128 PHE HXT H N N 129 SER N N N N 130 SER CA C N S 131 SER C C N N 132 SER O O N N 133 SER CB C N N 134 SER OG O N N 135 SER OXT O N N 136 SER H H N N 137 SER H2 H N N 138 SER HA H N N 139 SER HB2 H N N 140 SER HB3 H N N 141 SER HG H N N 142 SER HXT H N N 143 VAL N N N N 144 VAL CA C N S 145 VAL C C N N 146 VAL O O N N 147 VAL CB C N N 148 VAL CG1 C N N 149 VAL CG2 C N N 150 VAL OXT O N N 151 VAL H H N N 152 VAL H2 H N N 153 VAL HA H N N 154 VAL HB H N N 155 VAL HG11 H N N 156 VAL HG12 H N N 157 VAL HG13 H N N 158 VAL HG21 H N N 159 VAL HG22 H N N 160 VAL HG23 H N N 161 VAL HXT H N N 162 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ASP N CA sing N N 13 ASP N H sing N N 14 ASP N H2 sing N N 15 ASP CA C sing N N 16 ASP CA CB sing N N 17 ASP CA HA sing N N 18 ASP C O doub N N 19 ASP C OXT sing N N 20 ASP CB CG sing N N 21 ASP CB HB2 sing N N 22 ASP CB HB3 sing N N 23 ASP CG OD1 doub N N 24 ASP CG OD2 sing N N 25 ASP OD2 HD2 sing N N 26 ASP OXT HXT sing N N 27 GLY N CA sing N N 28 GLY N H sing N N 29 GLY N H2 sing N N 30 GLY CA C sing N N 31 GLY CA HA2 sing N N 32 GLY CA HA3 sing N N 33 GLY C O doub N N 34 GLY C OXT sing N N 35 GLY OXT HXT sing N N 36 LEU N CA sing N N 37 LEU N H sing N N 38 LEU N H2 sing N N 39 LEU CA C sing N N 40 LEU CA CB sing N N 41 LEU CA HA sing N N 42 LEU C O doub N N 43 LEU C OXT sing N N 44 LEU CB CG sing N N 45 LEU CB HB2 sing N N 46 LEU CB HB3 sing N N 47 LEU CG CD1 sing N N 48 LEU CG CD2 sing N N 49 LEU CG HG sing N N 50 LEU CD1 HD11 sing N N 51 LEU CD1 HD12 sing N N 52 LEU CD1 HD13 sing N N 53 LEU CD2 HD21 sing N N 54 LEU CD2 HD22 sing N N 55 LEU CD2 HD23 sing N N 56 LEU OXT HXT sing N N 57 LYS N CA sing N N 58 LYS N H sing N N 59 LYS N H2 sing N N 60 LYS CA C sing N N 61 LYS CA CB sing N N 62 LYS CA HA sing N N 63 LYS C O doub N N 64 LYS C OXT sing N N 65 LYS CB CG sing N N 66 LYS CB HB2 sing N N 67 LYS CB HB3 sing N N 68 LYS CG CD sing N N 69 LYS CG HG2 sing N N 70 LYS CG HG3 sing N N 71 LYS CD CE sing N N 72 LYS CD HD2 sing N N 73 LYS CD HD3 sing N N 74 LYS CE NZ sing N N 75 LYS CE HE2 sing N N 76 LYS CE HE3 sing N N 77 LYS NZ HZ1 sing N N 78 LYS NZ HZ2 sing N N 79 LYS NZ HZ3 sing N N 80 LYS OXT HXT sing N N 81 MET N CA sing N N 82 MET N H sing N N 83 MET N H2 sing N N 84 MET CA C sing N N 85 MET CA CB sing N N 86 MET CA HA sing N N 87 MET C O doub N N 88 MET C OXT sing N N 89 MET CB CG sing N N 90 MET CB HB2 sing N N 91 MET CB HB3 sing N N 92 MET CG SD sing N N 93 MET CG HG2 sing N N 94 MET CG HG3 sing N N 95 MET SD CE sing N N 96 MET CE HE1 sing N N 97 MET CE HE2 sing N N 98 MET CE HE3 sing N N 99 MET OXT HXT sing N N 100 PHE N CA sing N N 101 PHE N H sing N N 102 PHE N H2 sing N N 103 PHE CA C sing N N 104 PHE CA CB sing N N 105 PHE CA HA sing N N 106 PHE C O doub N N 107 PHE C OXT sing N N 108 PHE CB CG sing N N 109 PHE CB HB2 sing N N 110 PHE CB HB3 sing N N 111 PHE CG CD1 doub Y N 112 PHE CG CD2 sing Y N 113 PHE CD1 CE1 sing Y N 114 PHE CD1 HD1 sing N N 115 PHE CD2 CE2 doub Y N 116 PHE CD2 HD2 sing N N 117 PHE CE1 CZ doub Y N 118 PHE CE1 HE1 sing N N 119 PHE CE2 CZ sing Y N 120 PHE CE2 HE2 sing N N 121 PHE CZ HZ sing N N 122 PHE OXT HXT sing N N 123 SER N CA sing N N 124 SER N H sing N N 125 SER N H2 sing N N 126 SER CA C sing N N 127 SER CA CB sing N N 128 SER CA HA sing N N 129 SER C O doub N N 130 SER C OXT sing N N 131 SER CB OG sing N N 132 SER CB HB2 sing N N 133 SER CB HB3 sing N N 134 SER OG HG sing N N 135 SER OXT HXT sing N N 136 VAL N CA sing N N 137 VAL N H sing N N 138 VAL N H2 sing N N 139 VAL CA C sing N N 140 VAL CA CB sing N N 141 VAL CA HA sing N N 142 VAL C O doub N N 143 VAL C OXT sing N N 144 VAL CB CG1 sing N N 145 VAL CB CG2 sing N N 146 VAL CB HB sing N N 147 VAL CG1 HG11 sing N N 148 VAL CG1 HG12 sing N N 149 VAL CG1 HG13 sing N N 150 VAL CG2 HG21 sing N N 151 VAL CG2 HG22 sing N N 152 VAL CG2 HG23 sing N N 153 VAL OXT HXT sing N N 154 # _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.model INOVA _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'Varian INOVA' # _atom_sites.entry_id 2JN5 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_