HEADER HYDROLASE 30-JAN-07 2JNP TITLE SOLUTION STRUCTURE OF MATRIX METALLOPROTEINASE 3 (MMP-3) IN THE TITLE 2 PRESENCE OF N-ISOBUTYL-N-[4-METHOXYPHENYLSULFONYL]GLYCYL HYDROXAMIC TITLE 3 ACID (NNGH) COMPND MOL_ID: 1; COMPND 2 MOLECULE: MATRIX METALLOPROTEINASE-3; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 88-248; COMPND 5 SYNONYM: MMP-3, STROMELYSIN-1, TRANSIN-1, SL-1; COMPND 6 EC: 3.4.24.17; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MMP3, STMY1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET21A KEYWDS METALLOPROTEINASE, MMP, HYDROLASE EXPDTA SOLUTION NMR NUMMDL 25 AUTHOR L.A.ALCARAZ,L.BANCI,I.BERTINI,F.CANTINI,A.DONAIRE,L.GONNELLI REVDAT 4 20-DEC-23 2JNP 1 REMARK REVDAT 3 05-FEB-20 2JNP 1 REMARK REVDAT 2 24-FEB-09 2JNP 1 VERSN REVDAT 1 11-DEC-07 2JNP 0 JRNL AUTH L.A.ALCARAZ,L.BANCI,I.BERTINI,F.CANTINI,A.DONAIRE,L.GONNELLI JRNL TITL MATRIX METALLOPROTEINASE-INHIBITOR INTERACTION: THE SOLUTION JRNL TITL 2 STRUCTURE OF THE CATALYTIC DOMAIN OF HUMAN MATRIX JRNL TITL 3 METALLOPROTEINASE-3 WITH DIFFERENT INHIBITORS JRNL REF J.BIOL.INORG.CHEM. V. 12 1197 2007 JRNL REFN ISSN 0949-8257 JRNL PMID 17710450 JRNL DOI 10.1007/S00775-007-0288-9 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TOPSPIN, AMBER 8 REMARK 3 AUTHORS : BRUKER BIOSPIN (TOPSPIN), CASE, DARDEN, CHEATHAM, REMARK 3 III, SIMMERLING, WANG, DUKE, LUO, AND KOLL (AMBER) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2JNP COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-JAN-07. REMARK 100 THE DEPOSITION ID IS D_1000100061. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 8 REMARK 210 IONIC STRENGTH : TRIS 0.02, NACL 3 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM MMP3, 20 MM TRIS, 300 MM REMARK 210 SODIUM CHLORIDE, 90% H2O/10% D2O; REMARK 210 1 MM [U-98% 13C; U-98% 15N] REMARK 210 MMP3, 20 MM TRIS, 300 MM SODIUM REMARK 210 CHLORIDE, 90% H2O/10% D2O; 1 MM REMARK 210 [U-99% 15N] MMP3, 20 MM TRIS, REMARK 210 300 MM SODIUM CHLORIDE, 90% H2O/ REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H NOESY; 2D 1H-15N HSQC; REMARK 210 2D 1H-13C HSQC; 3D CBCA(CO)NH; REMARK 210 3D HNCACB; 3D HCCH-TOCSY; 3D 1H- REMARK 210 15N NOESY; 3D 1H-13C NOESY; 3D REMARK 210 HN(CO)CA; FILTERED NOESY; 3D HNHA REMARK 210 SPECTROMETER FIELD STRENGTH : 900 MHZ; 800 MHZ; 500 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XEASY, CARA 1.2, CYANA, SPARKY REMARK 210 3.110, CSI 2.0 REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 400 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 25 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 1 GLU A 202 CD GLU A 202 OE2 0.094 REMARK 500 2 GLU A 202 CD GLU A 202 OE2 0.091 REMARK 500 3 GLU A 202 CD GLU A 202 OE2 0.098 REMARK 500 4 GLU A 202 CD GLU A 202 OE2 0.097 REMARK 500 5 GLU A 202 CD GLU A 202 OE2 0.097 REMARK 500 6 GLU A 202 CD GLU A 202 OE2 0.096 REMARK 500 7 GLU A 202 CD GLU A 202 OE2 0.097 REMARK 500 8 GLU A 202 CD GLU A 202 OE2 0.103 REMARK 500 9 GLU A 202 CD GLU A 202 OE2 0.081 REMARK 500 10 GLU A 202 CD GLU A 202 OE2 0.091 REMARK 500 11 GLU A 202 CD GLU A 202 OE2 0.094 REMARK 500 12 GLU A 202 CD GLU A 202 OE2 0.093 REMARK 500 13 GLU A 202 CD GLU A 202 OE2 0.099 REMARK 500 14 GLU A 202 CD GLU A 202 OE2 0.101 REMARK 500 15 GLU A 202 CD GLU A 202 OE2 0.095 REMARK 500 16 GLU A 202 CD GLU A 202 OE2 0.093 REMARK 500 17 GLU A 202 CD GLU A 202 OE2 0.098 REMARK 500 18 GLU A 202 CD GLU A 202 OE2 0.090 REMARK 500 19 GLU A 202 CD GLU A 202 OE2 0.104 REMARK 500 20 GLU A 202 CD GLU A 202 OE2 0.097 REMARK 500 21 GLU A 202 CD GLU A 202 OE2 0.091 REMARK 500 22 GLU A 202 CD GLU A 202 OE2 0.099 REMARK 500 23 GLU A 202 CD GLU A 202 OE2 0.098 REMARK 500 24 GLU A 202 CD GLU A 202 OE2 0.092 REMARK 500 25 GLU A 202 CD GLU A 202 OE2 0.093 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 1 ARG A 93 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 1 ARG A 134 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 1 ASP A 177 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 1 ASP A 228 CB - CG - OD1 ANGL. DEV. = 10.1 DEGREES REMARK 500 1 ARG A 233 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 2 ARG A 100 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 2 ARG A 134 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 3 ARG A 93 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 3 ARG A 149 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 3 GLU A 184 OE1 - CD - OE2 ANGL. DEV. = -7.9 DEGREES REMARK 500 4 ARG A 134 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 4 ARG A 134 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 4 ASP A 237 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 5 TYR A 220 CB - CG - CD2 ANGL. DEV. = -4.6 DEGREES REMARK 500 5 ARG A 233 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 6 ARG A 93 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 6 ASP A 158 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 7 ARG A 93 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 7 ARG A 100 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 7 ARG A 149 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 7 GLU A 184 OE1 - CD - OE2 ANGL. DEV. = -7.8 DEGREES REMARK 500 7 ARG A 231 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 7 ARG A 231 NE - CZ - NH2 ANGL. DEV. = -4.6 DEGREES REMARK 500 8 ARG A 93 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 8 ARG A 149 NE - CZ - NH1 ANGL. DEV. = 4.4 DEGREES REMARK 500 8 PRO A 170 N - CA - CB ANGL. DEV. = 8.9 DEGREES REMARK 500 8 ARG A 231 CD - NE - CZ ANGL. DEV. = 9.7 DEGREES REMARK 500 8 ARG A 231 NE - CZ - NH1 ANGL. DEV. = 6.4 DEGREES REMARK 500 8 TYR A 246 CB - CG - CD2 ANGL. DEV. = -4.6 DEGREES REMARK 500 8 TYR A 246 CB - CG - CD1 ANGL. DEV. = 3.8 DEGREES REMARK 500 9 PRO A 160 N - CD - CG ANGL. DEV. = 10.3 DEGREES REMARK 500 9 GLU A 184 OE1 - CD - OE2 ANGL. DEV. = -7.9 DEGREES REMARK 500 10 ARG A 93 NE - CZ - NH1 ANGL. DEV. = 4.1 DEGREES REMARK 500 10 ARG A 100 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 10 GLU A 184 OE1 - CD - OE2 ANGL. DEV. = -7.8 DEGREES REMARK 500 11 ARG A 149 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 11 ASP A 158 CB - CG - OD1 ANGL. DEV. = 10.3 DEGREES REMARK 500 11 ARG A 231 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 11 ARG A 233 NE - CZ - NH1 ANGL. DEV. = 4.5 DEGREES REMARK 500 11 ARG A 233 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 13 ARG A 93 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 13 ARG A 134 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 13 PHE A 146 CB - CG - CD1 ANGL. DEV. = 4.7 DEGREES REMARK 500 13 HIS A 151 CB - CG - CD2 ANGL. DEV. = -10.2 DEGREES REMARK 500 13 ASP A 228 CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES REMARK 500 13 ARG A 231 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 14 ARG A 100 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 14 ASP A 158 CB - CG - OD1 ANGL. DEV. = -6.0 DEGREES REMARK 500 14 ASP A 177 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 14 ASP A 228 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 82 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 91 91.28 -56.46 REMARK 500 1 VAL A 102 28.08 -140.03 REMARK 500 1 GLU A 137 -76.82 7.76 REMARK 500 1 GLU A 139 101.97 89.28 REMARK 500 1 ARG A 149 17.12 47.28 REMARK 500 1 HIS A 151 28.92 -78.48 REMARK 500 1 PHE A 154 -31.96 -133.43 REMARK 500 1 TYR A 155 115.51 -174.75 REMARK 500 1 PRO A 156 -168.65 -74.43 REMARK 500 1 PRO A 160 89.78 -63.39 REMARK 500 1 LEU A 164 -55.04 -121.27 REMARK 500 1 ALA A 169 -71.41 -139.85 REMARK 500 1 ILE A 174 5.93 -65.37 REMARK 500 1 ASN A 175 100.23 -58.44 REMARK 500 1 ASN A 194 92.36 -66.61 REMARK 500 1 HIS A 224 -1.23 -57.60 REMARK 500 1 LEU A 229 1.85 -60.81 REMARK 500 1 LEU A 245 -72.26 -80.24 REMARK 500 1 TYR A 246 -70.84 -98.23 REMARK 500 2 LYS A 91 96.93 -56.50 REMARK 500 2 ARG A 149 7.39 -50.58 REMARK 500 2 HIS A 151 91.18 -63.61 REMARK 500 2 PHE A 154 -2.38 86.84 REMARK 500 2 PRO A 160 3.99 -64.13 REMARK 500 2 ALA A 169 -62.66 -136.81 REMARK 500 2 PRO A 172 -75.60 -82.00 REMARK 500 2 ILE A 174 4.53 -62.89 REMARK 500 2 ASN A 175 103.99 -58.98 REMARK 500 2 GLN A 185 94.42 -62.39 REMARK 500 2 THR A 190 16.79 57.72 REMARK 500 2 ASN A 194 99.59 -67.44 REMARK 500 2 HIS A 224 16.50 53.35 REMARK 500 2 LEU A 245 -72.11 -103.67 REMARK 500 3 LYS A 91 96.56 -54.10 REMARK 500 3 ARG A 93 -10.33 71.29 REMARK 500 3 PRO A 129 33.86 -74.60 REMARK 500 3 ARG A 149 -12.83 -45.28 REMARK 500 3 GLU A 150 29.20 -76.98 REMARK 500 3 PHE A 154 22.47 99.34 REMARK 500 3 TYR A 155 95.35 -170.17 REMARK 500 3 PHE A 157 64.65 28.80 REMARK 500 3 PRO A 160 11.07 -64.85 REMARK 500 3 ALA A 169 -73.72 -139.58 REMARK 500 3 ILE A 174 6.49 -67.54 REMARK 500 3 ASN A 175 102.93 -59.52 REMARK 500 3 PHE A 210 -111.74 -89.83 REMARK 500 3 ASN A 214 115.93 -165.08 REMARK 500 3 SER A 225 45.30 -72.60 REMARK 500 3 LEU A 245 -90.55 -73.28 REMARK 500 3 TYR A 246 -80.54 -87.47 REMARK 500 REMARK 500 THIS ENTRY HAS 481 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 TYR A 168 0.07 SIDE CHAIN REMARK 500 1 ARG A 231 0.09 SIDE CHAIN REMARK 500 1 ARG A 233 0.10 SIDE CHAIN REMARK 500 2 ARG A 100 0.09 SIDE CHAIN REMARK 500 3 ARG A 93 0.10 SIDE CHAIN REMARK 500 3 TYR A 155 0.12 SIDE CHAIN REMARK 500 4 TYR A 246 0.07 SIDE CHAIN REMARK 500 5 TYR A 223 0.07 SIDE CHAIN REMARK 500 5 TYR A 246 0.08 SIDE CHAIN REMARK 500 6 ARG A 93 0.09 SIDE CHAIN REMARK 500 6 HIS A 179 0.09 SIDE CHAIN REMARK 500 6 TYR A 223 0.09 SIDE CHAIN REMARK 500 6 PHE A 232 0.08 SIDE CHAIN REMARK 500 6 TYR A 246 0.08 SIDE CHAIN REMARK 500 7 HIS A 151 0.10 SIDE CHAIN REMARK 500 8 ARG A 100 0.13 SIDE CHAIN REMARK 500 8 ARG A 149 0.07 SIDE CHAIN REMARK 500 9 ARG A 134 0.12 SIDE CHAIN REMARK 500 9 ARG A 149 0.08 SIDE CHAIN REMARK 500 9 HIS A 179 0.09 SIDE CHAIN REMARK 500 10 ARG A 231 0.08 SIDE CHAIN REMARK 500 10 ARG A 233 0.09 SIDE CHAIN REMARK 500 11 ARG A 100 0.09 SIDE CHAIN REMARK 500 11 TYR A 104 0.07 SIDE CHAIN REMARK 500 11 HIS A 211 0.10 SIDE CHAIN REMARK 500 12 TYR A 104 0.09 SIDE CHAIN REMARK 500 12 HIS A 151 0.09 SIDE CHAIN REMARK 500 12 TYR A 155 0.10 SIDE CHAIN REMARK 500 13 TYR A 99 0.09 SIDE CHAIN REMARK 500 13 TYR A 104 0.08 SIDE CHAIN REMARK 500 13 ARG A 134 0.09 SIDE CHAIN REMARK 500 13 ARG A 149 0.13 SIDE CHAIN REMARK 500 13 HIS A 151 0.11 SIDE CHAIN REMARK 500 13 PHE A 180 0.08 SIDE CHAIN REMARK 500 13 TYR A 223 0.12 SIDE CHAIN REMARK 500 14 ARG A 93 0.08 SIDE CHAIN REMARK 500 14 ARG A 134 0.08 SIDE CHAIN REMARK 500 14 HIS A 211 0.09 SIDE CHAIN REMARK 500 15 TYR A 99 0.12 SIDE CHAIN REMARK 500 15 TYR A 223 0.08 SIDE CHAIN REMARK 500 16 ARG A 134 0.09 SIDE CHAIN REMARK 500 16 TYR A 155 0.09 SIDE CHAIN REMARK 500 16 ASP A 181 0.08 SIDE CHAIN REMARK 500 16 TYR A 223 0.08 SIDE CHAIN REMARK 500 16 ARG A 233 0.10 SIDE CHAIN REMARK 500 16 TYR A 246 0.12 SIDE CHAIN REMARK 500 17 TYR A 99 0.07 SIDE CHAIN REMARK 500 17 TYR A 155 0.10 SIDE CHAIN REMARK 500 17 TYR A 220 0.07 SIDE CHAIN REMARK 500 18 TYR A 223 0.08 SIDE CHAIN REMARK 500 REMARK 500 THIS ENTRY HAS 67 PLANE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 252 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 141 O REMARK 620 2 GLY A 173 O 137.4 REMARK 620 3 ASN A 175 O 65.8 76.9 REMARK 620 4 GLY A 176 O 64.8 120.1 68.8 REMARK 620 5 ASP A 177 OD1 110.4 107.6 125.5 62.5 REMARK 620 6 ASP A 177 OD2 141.0 63.3 100.2 76.2 46.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 251 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 158 OD1 REMARK 620 2 ASP A 158 OD2 47.4 REMARK 620 3 GLY A 159 O 82.0 82.5 REMARK 620 4 GLY A 161 O 109.7 62.7 83.3 REMARK 620 5 VAL A 163 O 89.6 68.9 147.3 69.9 REMARK 620 6 ASP A 181 OD2 85.9 124.3 125.2 150.0 85.2 REMARK 620 7 GLU A 184 OE1 141.2 135.3 63.4 84.3 129.0 99.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 250 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 211 NE2 REMARK 620 2 NGH A 253 O4 154.9 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 249 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 250 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 251 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 252 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NGH A 253 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 15120 RELATED DB: BMRB DBREF 2JNP A 88 248 UNP P08254 MMP3_HUMAN 105 265 SEQRES 1 A 161 GLY ILE PRO LYS TRP ARG LYS THR HIS LEU THR TYR ARG SEQRES 2 A 161 ILE VAL ASN TYR THR PRO ASP LEU PRO LYS ASP ALA VAL SEQRES 3 A 161 ASP SER ALA VAL GLU LYS ALA LEU LYS VAL TRP GLU GLU SEQRES 4 A 161 VAL THR PRO LEU THR PHE SER ARG LEU TYR GLU GLY GLU SEQRES 5 A 161 ALA ASP ILE MET ILE SER PHE ALA VAL ARG GLU HIS GLY SEQRES 6 A 161 ASP PHE TYR PRO PHE ASP GLY PRO GLY ASN VAL LEU ALA SEQRES 7 A 161 HIS ALA TYR ALA PRO GLY PRO GLY ILE ASN GLY ASP ALA SEQRES 8 A 161 HIS PHE ASP ASP ASP GLU GLN TRP THR LYS ASP THR THR SEQRES 9 A 161 GLY THR ASN LEU PHE LEU VAL ALA ALA HIS GLU ILE GLY SEQRES 10 A 161 HIS SER LEU GLY LEU PHE HIS SER ALA ASN THR GLU ALA SEQRES 11 A 161 LEU MET TYR PRO LEU TYR HIS SER LEU THR ASP LEU THR SEQRES 12 A 161 ARG PHE ARG LEU SER GLN ASP ASP ILE ASN GLY ILE GLN SEQRES 13 A 161 SER LEU TYR GLY PRO HET ZN A 249 1 HET ZN A 250 1 HET CA A 251 1 HET CA A 252 1 HET NGH A 253 40 HETNAM ZN ZINC ION HETNAM CA CALCIUM ION HETNAM NGH N-ISOBUTYL-N-[4-METHOXYPHENYLSULFONYL]GLYCYL HYDROXAMIC HETNAM 2 NGH ACID FORMUL 2 ZN 2(ZN 2+) FORMUL 4 CA 2(CA 2+) FORMUL 6 NGH C13 H20 N2 O5 S HELIX 1 1 PRO A 90 LYS A 94 5 5 HELIX 2 2 PRO A 109 THR A 128 1 20 HELIX 3 3 LEU A 108 LEU A 209 1 102 HELIX 4 4 SER A 235 TYR A 246 1 12 SHEET 1 A 5 THR A 131 ARG A 134 0 SHEET 2 A 5 HIS A 96 VAL A 102 1 N TYR A 99 O SER A 133 SHEET 3 A 5 ILE A 142 ALA A 147 1 O ILE A 142 N THR A 98 SHEET 4 A 5 ASP A 177 ASP A 181 1 O ALA A 178 N MET A 143 SHEET 5 A 5 ALA A 165 TYR A 168 -1 N TYR A 168 O ASP A 177 SHEET 1 B 2 TRP A 186 THR A 187 0 SHEET 2 B 2 THR A 193 ASN A 194 1 O THR A 193 N THR A 187 LINK O ASP A 141 CA CA A 252 1555 1555 2.64 LINK NE2 HIS A 151 ZN ZN A 249 1555 1555 2.27 LINK OD1 ASP A 158 CA CA A 251 1555 1555 2.59 LINK OD2 ASP A 158 CA CA A 251 1555 1555 2.74 LINK O GLY A 159 CA CA A 251 1555 1555 2.79 LINK O GLY A 161 CA CA A 251 1555 1555 2.85 LINK O VAL A 163 CA CA A 251 1555 1555 2.62 LINK O GLY A 173 CA CA A 252 1555 1555 2.87 LINK O ASN A 175 CA CA A 252 1555 1555 2.68 LINK O GLY A 176 CA CA A 252 1555 1555 2.67 LINK OD1 ASP A 177 CA CA A 252 1555 1555 2.79 LINK OD2 ASP A 177 CA CA A 252 1555 1555 2.54 LINK OD2 ASP A 181 CA CA A 251 1555 1555 2.54 LINK OE1 GLU A 184 CA CA A 251 1555 1555 2.51 LINK NE2 HIS A 211 ZN ZN A 250 1555 1555 2.30 LINK ZN ZN A 250 O4 NGH A 253 1555 1555 2.37 SITE 1 AC1 4 HIS A 151 ASP A 153 HIS A 166 HIS A 179 SITE 1 AC2 4 HIS A 201 HIS A 205 HIS A 211 NGH A 253 SITE 1 AC3 6 ASP A 158 GLY A 159 GLY A 161 VAL A 163 SITE 2 AC3 6 ASP A 181 GLU A 184 SITE 1 AC4 5 ASP A 141 GLY A 173 ASN A 175 GLY A 176 SITE 2 AC4 5 ASP A 177 SITE 1 AC5 14 ASN A 162 VAL A 163 LEU A 164 ALA A 165 SITE 2 AC5 14 HIS A 166 ALA A 167 LEU A 197 HIS A 201 SITE 3 AC5 14 GLU A 202 HIS A 205 HIS A 211 LEU A 218 SITE 4 AC5 14 TYR A 220 ZN A 250 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1