data_2K8J # _entry.id 2K8J # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2K8J pdb_00002k8j 10.2210/pdb2k8j/pdb RCSB RCSB100810 ? ? WWPDB D_1000100810 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-01-13 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2024-05-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2K8J _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-09-12 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.content_type unspecified _pdbx_database_related.db_id 6087 _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'HCV p7' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Montserret, R.' 1 'Penin, F.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'NMR structure and ion channel activity of the p7 protein from hepatitis C virus.' J.Biol.Chem. 285 31446 31461 2010 JBCHA3 US 0021-9258 0071 ? 20667830 10.1074/jbc.M110.122895 1 'Structural and functional analysis of the HCV p7 protein.' 'Methods Mol.Biol.' 510 125 143 2009 ? US 1064-3745 ? ? 19009258 10.1007/978-1-59745-394-3_10 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Montserret, R.' 1 ? primary 'Saint, N.' 2 ? primary 'Vanbelle, C.' 3 ? primary 'Salvay, A.G.' 4 ? primary 'Simorre, J.P.' 5 ? primary 'Ebel, C.' 6 ? primary 'Sapay, N.' 7 ? primary 'Renisio, J.G.' 8 ? primary 'Bockmann, A.' 9 ? primary 'Steinmann, E.' 10 ? primary 'Pietschmann, T.' 11 ? primary 'Dubuisson, J.' 12 ? primary 'Chipot, C.' 13 ? primary 'Penin, F.' 14 ? 1 'Saint, N.' 15 ? 1 'Montserret, R.' 16 ? 1 'Chipot, C.' 17 ? 1 'Penin, F.' 18 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description p7tm2 _entity.formula_weight 3153.846 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'UNP residues 781 to 809' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code RLVPGAAYALYGVWPLLLLLLALPPRAYA _entity_poly.pdbx_seq_one_letter_code_can RLVPGAAYALYGVWPLLLLLLALPPRAYA _entity_poly.pdbx_strand_id X _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ARG n 1 2 LEU n 1 3 VAL n 1 4 PRO n 1 5 GLY n 1 6 ALA n 1 7 ALA n 1 8 TYR n 1 9 ALA n 1 10 LEU n 1 11 TYR n 1 12 GLY n 1 13 VAL n 1 14 TRP n 1 15 PRO n 1 16 LEU n 1 17 LEU n 1 18 LEU n 1 19 LEU n 1 20 LEU n 1 21 LEU n 1 22 ALA n 1 23 LEU n 1 24 PRO n 1 25 PRO n 1 26 ARG n 1 27 ALA n 1 28 TYR n 1 29 ALA n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'The protein was chemically synthesized. It is naturally found in hepatitis C virus.' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ARG 1 1 1 ARG ARG X . n A 1 2 LEU 2 2 2 LEU LEU X . n A 1 3 VAL 3 3 3 VAL VAL X . n A 1 4 PRO 4 4 4 PRO PRO X . n A 1 5 GLY 5 5 5 GLY GLY X . n A 1 6 ALA 6 6 6 ALA ALA X . n A 1 7 ALA 7 7 7 ALA ALA X . n A 1 8 TYR 8 8 8 TYR TYR X . n A 1 9 ALA 9 9 9 ALA ALA X . n A 1 10 LEU 10 10 10 LEU LEU X . n A 1 11 TYR 11 11 11 TYR TYR X . n A 1 12 GLY 12 12 12 GLY GLY X . n A 1 13 VAL 13 13 13 VAL VAL X . n A 1 14 TRP 14 14 14 TRP TRP X . n A 1 15 PRO 15 15 15 PRO PRO X . n A 1 16 LEU 16 16 16 LEU LEU X . n A 1 17 LEU 17 17 17 LEU LEU X . n A 1 18 LEU 18 18 18 LEU LEU X . n A 1 19 LEU 19 19 19 LEU LEU X . n A 1 20 LEU 20 20 20 LEU LEU X . n A 1 21 LEU 21 21 21 LEU LEU X . n A 1 22 ALA 22 22 22 ALA ALA X . n A 1 23 LEU 23 23 23 LEU LEU X . n A 1 24 PRO 24 24 24 PRO PRO X . n A 1 25 PRO 25 25 25 PRO PRO X . n A 1 26 ARG 26 26 26 ARG ARG X . n A 1 27 ALA 27 27 27 ALA ALA X . n A 1 28 TYR 28 28 28 TYR TYR X . n A 1 29 ALA 29 29 29 ALA ALA X . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2K8J _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2K8J _struct.title 'Solution structure of HCV p7 tm2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2K8J _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' _struct_keywords.text 'p7 polypeptide, HCV, ion chaneling, transmembrane, VIRAL PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code POLG_HCVJA _struct_ref.pdbx_db_accession P26662 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code RLVPGAAYALYGVWPLLLLLLALPPRAYA _struct_ref.pdbx_align_begin 781 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2K8J _struct_ref_seq.pdbx_strand_id X _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 29 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P26662 _struct_ref_seq.db_align_beg 781 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 809 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 29 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id GLY _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 5 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id ALA _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 22 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id GLY _struct_conf.beg_auth_asym_id X _struct_conf.beg_auth_seq_id 5 _struct_conf.end_auth_comp_id ALA _struct_conf.end_auth_asym_id X _struct_conf.end_auth_seq_id 22 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU X 2 ? ? 56.80 84.05 2 1 PRO X 4 ? ? -88.91 47.43 3 1 ALA X 7 ? ? -98.24 30.50 4 1 TYR X 28 ? ? 70.63 -50.94 5 2 ALA X 7 ? ? -98.78 30.63 6 2 ALA X 27 ? ? -152.84 60.15 7 3 LEU X 10 ? ? -109.50 -61.05 8 3 ALA X 22 ? ? -98.41 36.70 9 3 ALA X 27 ? ? 59.08 81.11 10 4 ALA X 27 ? ? -163.09 44.90 11 4 TYR X 28 ? ? -158.06 -64.33 12 5 ALA X 22 ? ? -95.89 38.69 13 5 ALA X 27 ? ? -164.69 34.98 14 5 TYR X 28 ? ? -158.77 -41.40 15 6 LEU X 2 ? ? 63.74 173.82 16 6 ALA X 22 ? ? -95.51 31.65 17 6 ALA X 27 ? ? -106.34 48.73 18 7 VAL X 3 ? ? 55.67 -178.84 19 7 PRO X 4 ? ? -75.49 -160.16 20 7 ALA X 22 ? ? -94.16 30.43 21 7 ARG X 26 ? ? -132.96 -54.03 22 7 ALA X 27 ? ? -143.99 51.69 23 7 TYR X 28 ? ? 74.95 -40.23 24 9 LEU X 2 ? ? 59.04 102.07 25 9 ALA X 22 ? ? -109.20 49.40 26 10 ALA X 27 ? ? -119.79 54.56 27 10 TYR X 28 ? ? -152.15 -54.38 28 11 PRO X 25 ? ? -79.16 -75.52 29 11 ALA X 27 ? ? -93.20 45.64 30 12 LEU X 2 ? ? -153.20 -132.62 31 12 PRO X 4 ? ? -69.90 -93.51 32 12 TYR X 28 ? ? 57.93 73.72 33 13 LEU X 2 ? ? 51.21 77.20 34 13 TYR X 28 ? ? -162.92 -39.49 35 14 LEU X 2 ? ? 63.70 99.18 36 14 PRO X 4 ? ? -89.91 36.79 37 14 ARG X 26 ? ? -148.72 -54.65 38 14 ALA X 27 ? ? -133.49 -71.46 39 14 TYR X 28 ? ? -148.64 -61.70 40 15 LEU X 10 ? ? -128.67 -58.92 41 15 ARG X 26 ? ? -94.19 -67.28 42 15 ALA X 27 ? ? -159.62 59.03 43 15 TYR X 28 ? ? 73.60 -24.57 44 16 PRO X 4 ? ? -79.13 -163.79 45 16 ARG X 26 ? ? -87.06 48.01 46 16 TYR X 28 ? ? -138.27 -38.97 47 17 ALA X 22 ? ? -118.70 51.23 48 17 ALA X 27 ? ? -169.59 34.61 49 19 LEU X 2 ? ? -153.27 39.37 50 19 ARG X 26 ? ? -139.02 -65.42 51 20 TYR X 8 ? ? -130.34 -59.02 52 21 PRO X 24 ? ? -79.23 -70.09 53 21 ALA X 27 ? ? 61.43 77.78 54 22 PRO X 4 ? ? -75.60 -165.60 55 22 ALA X 27 ? ? -152.33 55.58 56 23 ARG X 26 ? ? -150.89 -54.08 57 23 TYR X 28 ? ? -162.10 -55.93 58 24 PRO X 4 ? ? -88.30 36.88 59 24 ALA X 27 ? ? -111.26 54.05 60 25 ALA X 22 ? ? -101.30 41.34 61 25 ALA X 27 ? ? 68.49 91.46 62 26 TYR X 8 ? ? -123.06 -60.75 63 26 ALA X 22 ? ? -109.43 51.58 64 26 PRO X 25 ? ? -73.57 -166.91 65 26 ALA X 27 ? ? -151.24 63.07 66 26 TYR X 28 ? ? -130.17 -52.89 67 27 ARG X 26 ? ? -117.68 -75.62 68 27 ALA X 27 ? ? -156.92 33.65 69 27 TYR X 28 ? ? -164.54 -37.92 70 28 LEU X 2 ? ? 62.85 106.94 71 28 PRO X 4 ? ? -79.67 -168.01 72 28 ARG X 26 ? ? -158.45 -65.11 73 28 ALA X 27 ? ? -154.86 42.91 74 29 LEU X 2 ? ? -104.38 76.88 75 29 PRO X 4 ? ? -89.06 38.89 76 29 ALA X 22 ? ? -109.44 51.17 77 29 ARG X 26 ? ? -162.04 -47.13 78 29 TYR X 28 ? ? -155.76 -52.48 79 30 ALA X 22 ? ? -93.90 33.95 80 30 ARG X 26 ? ? -105.08 48.50 81 30 TYR X 28 ? ? -171.05 -40.76 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 ARG X 1 ? ? 0.317 'SIDE CHAIN' 2 1 ARG X 26 ? ? 0.309 'SIDE CHAIN' 3 2 ARG X 1 ? ? 0.302 'SIDE CHAIN' 4 2 ARG X 26 ? ? 0.317 'SIDE CHAIN' 5 3 ARG X 1 ? ? 0.317 'SIDE CHAIN' 6 3 ARG X 26 ? ? 0.311 'SIDE CHAIN' 7 4 ARG X 1 ? ? 0.311 'SIDE CHAIN' 8 4 ARG X 26 ? ? 0.317 'SIDE CHAIN' 9 5 ARG X 1 ? ? 0.317 'SIDE CHAIN' 10 5 ARG X 26 ? ? 0.313 'SIDE CHAIN' 11 6 ARG X 1 ? ? 0.317 'SIDE CHAIN' 12 6 ARG X 26 ? ? 0.285 'SIDE CHAIN' 13 7 ARG X 1 ? ? 0.316 'SIDE CHAIN' 14 7 ARG X 26 ? ? 0.317 'SIDE CHAIN' 15 8 ARG X 1 ? ? 0.316 'SIDE CHAIN' 16 8 ARG X 26 ? ? 0.292 'SIDE CHAIN' 17 9 ARG X 1 ? ? 0.312 'SIDE CHAIN' 18 9 ARG X 26 ? ? 0.305 'SIDE CHAIN' 19 10 ARG X 1 ? ? 0.315 'SIDE CHAIN' 20 10 ARG X 26 ? ? 0.316 'SIDE CHAIN' 21 11 ARG X 1 ? ? 0.315 'SIDE CHAIN' 22 11 ARG X 26 ? ? 0.313 'SIDE CHAIN' 23 12 ARG X 1 ? ? 0.294 'SIDE CHAIN' 24 12 ARG X 26 ? ? 0.318 'SIDE CHAIN' 25 13 ARG X 1 ? ? 0.317 'SIDE CHAIN' 26 13 ARG X 26 ? ? 0.315 'SIDE CHAIN' 27 14 ARG X 1 ? ? 0.316 'SIDE CHAIN' 28 14 ARG X 26 ? ? 0.277 'SIDE CHAIN' 29 15 ARG X 1 ? ? 0.316 'SIDE CHAIN' 30 15 ARG X 26 ? ? 0.317 'SIDE CHAIN' 31 16 ARG X 1 ? ? 0.313 'SIDE CHAIN' 32 16 ARG X 26 ? ? 0.316 'SIDE CHAIN' 33 17 ARG X 1 ? ? 0.316 'SIDE CHAIN' 34 17 ARG X 26 ? ? 0.279 'SIDE CHAIN' 35 18 ARG X 1 ? ? 0.309 'SIDE CHAIN' 36 18 ARG X 26 ? ? 0.314 'SIDE CHAIN' 37 19 ARG X 1 ? ? 0.318 'SIDE CHAIN' 38 19 ARG X 26 ? ? 0.310 'SIDE CHAIN' 39 20 ARG X 1 ? ? 0.314 'SIDE CHAIN' 40 20 ARG X 26 ? ? 0.280 'SIDE CHAIN' 41 21 ARG X 1 ? ? 0.317 'SIDE CHAIN' 42 21 ARG X 26 ? ? 0.309 'SIDE CHAIN' 43 22 ARG X 1 ? ? 0.311 'SIDE CHAIN' 44 22 ARG X 26 ? ? 0.309 'SIDE CHAIN' 45 23 ARG X 1 ? ? 0.313 'SIDE CHAIN' 46 23 ARG X 26 ? ? 0.316 'SIDE CHAIN' 47 24 ARG X 1 ? ? 0.304 'SIDE CHAIN' 48 24 ARG X 26 ? ? 0.317 'SIDE CHAIN' 49 25 ARG X 1 ? ? 0.304 'SIDE CHAIN' 50 25 ARG X 26 ? ? 0.315 'SIDE CHAIN' 51 26 ARG X 1 ? ? 0.316 'SIDE CHAIN' 52 26 ARG X 26 ? ? 0.309 'SIDE CHAIN' 53 27 ARG X 1 ? ? 0.316 'SIDE CHAIN' 54 27 ARG X 26 ? ? 0.319 'SIDE CHAIN' 55 28 ARG X 1 ? ? 0.317 'SIDE CHAIN' 56 28 ARG X 26 ? ? 0.298 'SIDE CHAIN' 57 29 ARG X 1 ? ? 0.295 'SIDE CHAIN' 58 29 ARG X 26 ? ? 0.319 'SIDE CHAIN' 59 30 ARG X 1 ? ? 0.316 'SIDE CHAIN' 60 30 ARG X 26 ? ? 0.315 'SIDE CHAIN' # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations' _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 30 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2K8J _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2K8J _pdbx_nmr_representative.selection_criteria 'closest to the average' # _pdbx_nmr_sample_details.contents '1 mM p7tm2, trifluoroethanol/water' _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system trifluoroethanol/water # _pdbx_nmr_exptl_sample.component p7tm2 _pdbx_nmr_exptl_sample.concentration 1 _pdbx_nmr_exptl_sample.concentration_units mM _pdbx_nmr_exptl_sample.isotopic_labeling ? _pdbx_nmr_exptl_sample.solution_id 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength none _pdbx_nmr_exptl_sample_conditions.pH 7 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-1H NOESY' 1 2 1 '2D 1H-1H TOCSY' 1 3 1 '2D 1H-13C HSQC' # _pdbx_nmr_refine.entry_id 2K8J _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal Varian collection VNMR ? 1 'Schwieters, Kuszewski, Tjandra and Clore' refinement Xplor-NIH 2.16.0 2 'Schwieters, Kuszewski, Tjandra and Clore' 'structure solution' Xplor-NIH 2.16.0 3 Varian 'structure solution' VNMR ? 4 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 GLY N N N N 41 GLY CA C N N 42 GLY C C N N 43 GLY O O N N 44 GLY OXT O N N 45 GLY H H N N 46 GLY H2 H N N 47 GLY HA2 H N N 48 GLY HA3 H N N 49 GLY HXT H N N 50 LEU N N N N 51 LEU CA C N S 52 LEU C C N N 53 LEU O O N N 54 LEU CB C N N 55 LEU CG C N N 56 LEU CD1 C N N 57 LEU CD2 C N N 58 LEU OXT O N N 59 LEU H H N N 60 LEU H2 H N N 61 LEU HA H N N 62 LEU HB2 H N N 63 LEU HB3 H N N 64 LEU HG H N N 65 LEU HD11 H N N 66 LEU HD12 H N N 67 LEU HD13 H N N 68 LEU HD21 H N N 69 LEU HD22 H N N 70 LEU HD23 H N N 71 LEU HXT H N N 72 PRO N N N N 73 PRO CA C N S 74 PRO C C N N 75 PRO O O N N 76 PRO CB C N N 77 PRO CG C N N 78 PRO CD C N N 79 PRO OXT O N N 80 PRO H H N N 81 PRO HA H N N 82 PRO HB2 H N N 83 PRO HB3 H N N 84 PRO HG2 H N N 85 PRO HG3 H N N 86 PRO HD2 H N N 87 PRO HD3 H N N 88 PRO HXT H N N 89 TRP N N N N 90 TRP CA C N S 91 TRP C C N N 92 TRP O O N N 93 TRP CB C N N 94 TRP CG C Y N 95 TRP CD1 C Y N 96 TRP CD2 C Y N 97 TRP NE1 N Y N 98 TRP CE2 C Y N 99 TRP CE3 C Y N 100 TRP CZ2 C Y N 101 TRP CZ3 C Y N 102 TRP CH2 C Y N 103 TRP OXT O N N 104 TRP H H N N 105 TRP H2 H N N 106 TRP HA H N N 107 TRP HB2 H N N 108 TRP HB3 H N N 109 TRP HD1 H N N 110 TRP HE1 H N N 111 TRP HE3 H N N 112 TRP HZ2 H N N 113 TRP HZ3 H N N 114 TRP HH2 H N N 115 TRP HXT H N N 116 TYR N N N N 117 TYR CA C N S 118 TYR C C N N 119 TYR O O N N 120 TYR CB C N N 121 TYR CG C Y N 122 TYR CD1 C Y N 123 TYR CD2 C Y N 124 TYR CE1 C Y N 125 TYR CE2 C Y N 126 TYR CZ C Y N 127 TYR OH O N N 128 TYR OXT O N N 129 TYR H H N N 130 TYR H2 H N N 131 TYR HA H N N 132 TYR HB2 H N N 133 TYR HB3 H N N 134 TYR HD1 H N N 135 TYR HD2 H N N 136 TYR HE1 H N N 137 TYR HE2 H N N 138 TYR HH H N N 139 TYR HXT H N N 140 VAL N N N N 141 VAL CA C N S 142 VAL C C N N 143 VAL O O N N 144 VAL CB C N N 145 VAL CG1 C N N 146 VAL CG2 C N N 147 VAL OXT O N N 148 VAL H H N N 149 VAL H2 H N N 150 VAL HA H N N 151 VAL HB H N N 152 VAL HG11 H N N 153 VAL HG12 H N N 154 VAL HG13 H N N 155 VAL HG21 H N N 156 VAL HG22 H N N 157 VAL HG23 H N N 158 VAL HXT H N N 159 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 GLY N CA sing N N 39 GLY N H sing N N 40 GLY N H2 sing N N 41 GLY CA C sing N N 42 GLY CA HA2 sing N N 43 GLY CA HA3 sing N N 44 GLY C O doub N N 45 GLY C OXT sing N N 46 GLY OXT HXT sing N N 47 LEU N CA sing N N 48 LEU N H sing N N 49 LEU N H2 sing N N 50 LEU CA C sing N N 51 LEU CA CB sing N N 52 LEU CA HA sing N N 53 LEU C O doub N N 54 LEU C OXT sing N N 55 LEU CB CG sing N N 56 LEU CB HB2 sing N N 57 LEU CB HB3 sing N N 58 LEU CG CD1 sing N N 59 LEU CG CD2 sing N N 60 LEU CG HG sing N N 61 LEU CD1 HD11 sing N N 62 LEU CD1 HD12 sing N N 63 LEU CD1 HD13 sing N N 64 LEU CD2 HD21 sing N N 65 LEU CD2 HD22 sing N N 66 LEU CD2 HD23 sing N N 67 LEU OXT HXT sing N N 68 PRO N CA sing N N 69 PRO N CD sing N N 70 PRO N H sing N N 71 PRO CA C sing N N 72 PRO CA CB sing N N 73 PRO CA HA sing N N 74 PRO C O doub N N 75 PRO C OXT sing N N 76 PRO CB CG sing N N 77 PRO CB HB2 sing N N 78 PRO CB HB3 sing N N 79 PRO CG CD sing N N 80 PRO CG HG2 sing N N 81 PRO CG HG3 sing N N 82 PRO CD HD2 sing N N 83 PRO CD HD3 sing N N 84 PRO OXT HXT sing N N 85 TRP N CA sing N N 86 TRP N H sing N N 87 TRP N H2 sing N N 88 TRP CA C sing N N 89 TRP CA CB sing N N 90 TRP CA HA sing N N 91 TRP C O doub N N 92 TRP C OXT sing N N 93 TRP CB CG sing N N 94 TRP CB HB2 sing N N 95 TRP CB HB3 sing N N 96 TRP CG CD1 doub Y N 97 TRP CG CD2 sing Y N 98 TRP CD1 NE1 sing Y N 99 TRP CD1 HD1 sing N N 100 TRP CD2 CE2 doub Y N 101 TRP CD2 CE3 sing Y N 102 TRP NE1 CE2 sing Y N 103 TRP NE1 HE1 sing N N 104 TRP CE2 CZ2 sing Y N 105 TRP CE3 CZ3 doub Y N 106 TRP CE3 HE3 sing N N 107 TRP CZ2 CH2 doub Y N 108 TRP CZ2 HZ2 sing N N 109 TRP CZ3 CH2 sing Y N 110 TRP CZ3 HZ3 sing N N 111 TRP CH2 HH2 sing N N 112 TRP OXT HXT sing N N 113 TYR N CA sing N N 114 TYR N H sing N N 115 TYR N H2 sing N N 116 TYR CA C sing N N 117 TYR CA CB sing N N 118 TYR CA HA sing N N 119 TYR C O doub N N 120 TYR C OXT sing N N 121 TYR CB CG sing N N 122 TYR CB HB2 sing N N 123 TYR CB HB3 sing N N 124 TYR CG CD1 doub Y N 125 TYR CG CD2 sing Y N 126 TYR CD1 CE1 sing Y N 127 TYR CD1 HD1 sing N N 128 TYR CD2 CE2 doub Y N 129 TYR CD2 HD2 sing N N 130 TYR CE1 CZ doub Y N 131 TYR CE1 HE1 sing N N 132 TYR CE2 CZ sing Y N 133 TYR CE2 HE2 sing N N 134 TYR CZ OH sing N N 135 TYR OH HH sing N N 136 TYR OXT HXT sing N N 137 VAL N CA sing N N 138 VAL N H sing N N 139 VAL N H2 sing N N 140 VAL CA C sing N N 141 VAL CA CB sing N N 142 VAL CA HA sing N N 143 VAL C O doub N N 144 VAL C OXT sing N N 145 VAL CB CG1 sing N N 146 VAL CB CG2 sing N N 147 VAL CB HB sing N N 148 VAL CG1 HG11 sing N N 149 VAL CG1 HG12 sing N N 150 VAL CG1 HG13 sing N N 151 VAL CG2 HG21 sing N N 152 VAL CG2 HG22 sing N N 153 VAL CG2 HG23 sing N N 154 VAL OXT HXT sing N N 155 # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 500 Varian UNITYPLUS 1 'Varian UnityPlus' 800 Varian INOVA 2 'Varian INOVA' # _atom_sites.entry_id 2K8J _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_