data_2KDV # _entry.id 2KDV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2KDV pdb_00002kdv 10.2210/pdb2kdv/pdb RCSB RCSB100998 ? ? WWPDB D_1000100998 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2KDW 'RppH mutant E53A' unspecified BMRB 16124 . unspecified # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2KDV _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2009-01-19 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bi, Y.' 1 'Li, H.' 2 'Jin, C.' 3 # _citation.id primary _citation.title 'Solution structure of RNA pyrophosphohydrolase RppH from Escherichia coli' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bi, Y.' 1 ? primary 'Li, H.' 2 ? primary 'Jin, C.' 3 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'RNA pyrophosphohydrolase' _entity.formula_weight 19435.281 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec 3.6.1.- _entity.pdbx_mutation ? _entity.pdbx_fragment 'residues 1-164' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'RppH, (Di)nucleoside polyphosphate hydrolase, Ap5A pyrophosphatase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLP KRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQE NTPK ; _entity_poly.pdbx_seq_one_letter_code_can ;MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLP KRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQE NTPK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ILE n 1 3 ASP n 1 4 ASP n 1 5 ASP n 1 6 GLY n 1 7 TYR n 1 8 ARG n 1 9 PRO n 1 10 ASN n 1 11 VAL n 1 12 GLY n 1 13 ILE n 1 14 VAL n 1 15 ILE n 1 16 CYS n 1 17 ASN n 1 18 ARG n 1 19 GLN n 1 20 GLY n 1 21 GLN n 1 22 VAL n 1 23 MET n 1 24 TRP n 1 25 ALA n 1 26 ARG n 1 27 ARG n 1 28 PHE n 1 29 GLY n 1 30 GLN n 1 31 HIS n 1 32 SER n 1 33 TRP n 1 34 GLN n 1 35 PHE n 1 36 PRO n 1 37 GLN n 1 38 GLY n 1 39 GLY n 1 40 ILE n 1 41 ASN n 1 42 PRO n 1 43 GLY n 1 44 GLU n 1 45 SER n 1 46 ALA n 1 47 GLU n 1 48 GLN n 1 49 ALA n 1 50 MET n 1 51 TYR n 1 52 ARG n 1 53 GLU n 1 54 LEU n 1 55 PHE n 1 56 GLU n 1 57 GLU n 1 58 VAL n 1 59 GLY n 1 60 LEU n 1 61 SER n 1 62 ARG n 1 63 LYS n 1 64 ASP n 1 65 VAL n 1 66 ARG n 1 67 ILE n 1 68 LEU n 1 69 ALA n 1 70 SER n 1 71 THR n 1 72 ARG n 1 73 ASN n 1 74 TRP n 1 75 LEU n 1 76 ARG n 1 77 TYR n 1 78 LYS n 1 79 LEU n 1 80 PRO n 1 81 LYS n 1 82 ARG n 1 83 LEU n 1 84 VAL n 1 85 ARG n 1 86 TRP n 1 87 ASP n 1 88 THR n 1 89 LYS n 1 90 PRO n 1 91 VAL n 1 92 CYS n 1 93 ILE n 1 94 GLY n 1 95 GLN n 1 96 LYS n 1 97 GLN n 1 98 LYS n 1 99 TRP n 1 100 PHE n 1 101 LEU n 1 102 LEU n 1 103 GLN n 1 104 LEU n 1 105 VAL n 1 106 SER n 1 107 GLY n 1 108 ASP n 1 109 ALA n 1 110 GLU n 1 111 ILE n 1 112 ASN n 1 113 MET n 1 114 GLN n 1 115 THR n 1 116 SER n 1 117 SER n 1 118 THR n 1 119 PRO n 1 120 GLU n 1 121 PHE n 1 122 ASP n 1 123 GLY n 1 124 TRP n 1 125 ARG n 1 126 TRP n 1 127 VAL n 1 128 SER n 1 129 TYR n 1 130 TRP n 1 131 TYR n 1 132 PRO n 1 133 VAL n 1 134 ARG n 1 135 GLN n 1 136 VAL n 1 137 VAL n 1 138 SER n 1 139 PHE n 1 140 LYS n 1 141 ARG n 1 142 ASP n 1 143 VAL n 1 144 TYR n 1 145 ARG n 1 146 ARG n 1 147 VAL n 1 148 MET n 1 149 LYS n 1 150 GLU n 1 151 PHE n 1 152 ALA n 1 153 SER n 1 154 VAL n 1 155 VAL n 1 156 MET n 1 157 SER n 1 158 LEU n 1 159 GLN n 1 160 GLU n 1 161 ASN n 1 162 THR n 1 163 PRO n 1 164 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'rppH, nudH, ygdP, b2830, JW2798' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain k12 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83333 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type vector _entity_src_gen.pdbx_host_org_vector pet21 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RPPH_ECOLI _struct_ref.pdbx_db_accession P0A776 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLP KRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQE NTPK ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2KDV _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 164 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P0A776 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 164 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 164 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '3D 1H-15N NOESY' 1 3 1 '3D 1H-13C NOESY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 90 _pdbx_nmr_exptl_sample_conditions.pH 5 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 303 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents ;50mM sodium acetate-1, 20mM sodium chloride-2, 40mM DTT-3, 10mM arginine-4, 10mM glutamic-5, 0.8mM [U-13C; U-15N] RppH protein-6, 90% H2O/10% D2O ; _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 600 Bruker AVANCE 1 'Bruker Avance' 800 Bruker AVANCE 2 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2KDV _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 21 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2KDV _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.representative_conformer 1 _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2KDV _pdbx_nmr_representative.selection_criteria 'minimized average' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe ? 1 'Johnson, One Moon Scientific' 'data analysis' NMRView ? 2 'Bruker Biospin' collection XwinNMR ? 3 'Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm' refinement Amber ? 4 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA ? 5 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2KDV _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2KDV _struct.title 'Solution structure of RNA Pyrophosphohydrolase RppH from Escherichia coli' _struct.pdbx_model_details 'minimized average, model 1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details 'minimized average' # _struct_keywords.entry_id 2KDV _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'nudix family, Hydrolase, Magnesium, Manganese, Zinc' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 45 ? GLY A 59 ? SER A 45 GLY A 59 1 ? 15 HELX_P HELX_P2 2 SER A 61 ? LYS A 63 ? SER A 61 LYS A 63 5 ? 3 HELX_P HELX_P3 3 GLY A 107 ? ILE A 111 ? GLY A 107 ILE A 111 5 ? 5 HELX_P HELX_P4 4 TYR A 131 ? VAL A 136 ? TYR A 131 VAL A 136 5 ? 6 HELX_P HELX_P5 5 VAL A 137 ? ASN A 161 ? VAL A 137 ASN A 161 1 ? 25 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LYS 89 A . ? LYS 89 A PRO 90 A ? PRO 90 A 1 -16.05 2 LYS 89 A . ? LYS 89 A PRO 90 A ? PRO 90 A 2 -10.29 3 LYS 89 A . ? LYS 89 A PRO 90 A ? PRO 90 A 3 -10.15 4 LYS 89 A . ? LYS 89 A PRO 90 A ? PRO 90 A 4 -10.34 5 LYS 89 A . ? LYS 89 A PRO 90 A ? PRO 90 A 5 -10.34 6 LYS 89 A . ? LYS 89 A PRO 90 A ? PRO 90 A 6 -10.14 7 LYS 89 A . ? LYS 89 A PRO 90 A ? PRO 90 A 7 -10.36 8 LYS 89 A . ? LYS 89 A PRO 90 A ? PRO 90 A 8 -10.34 9 LYS 89 A . ? LYS 89 A PRO 90 A ? PRO 90 A 9 -10.55 10 LYS 89 A . ? LYS 89 A PRO 90 A ? PRO 90 A 10 -10.34 11 LYS 89 A . ? LYS 89 A PRO 90 A ? PRO 90 A 11 -10.36 12 LYS 89 A . ? LYS 89 A PRO 90 A ? PRO 90 A 12 -10.46 13 LYS 89 A . ? LYS 89 A PRO 90 A ? PRO 90 A 13 -9.60 14 LYS 89 A . ? LYS 89 A PRO 90 A ? PRO 90 A 14 -10.41 15 LYS 89 A . ? LYS 89 A PRO 90 A ? PRO 90 A 15 -10.25 16 LYS 89 A . ? LYS 89 A PRO 90 A ? PRO 90 A 16 -11.08 17 LYS 89 A . ? LYS 89 A PRO 90 A ? PRO 90 A 17 -10.34 18 LYS 89 A . ? LYS 89 A PRO 90 A ? PRO 90 A 18 -10.24 19 LYS 89 A . ? LYS 89 A PRO 90 A ? PRO 90 A 19 -10.50 20 LYS 89 A . ? LYS 89 A PRO 90 A ? PRO 90 A 20 -10.37 21 LYS 89 A . ? LYS 89 A PRO 90 A ? PRO 90 A 21 -10.15 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 37 ? GLY A 39 ? GLN A 37 GLY A 39 A 2 TYR A 7 ? CYS A 16 ? TYR A 7 CYS A 16 A 3 GLY A 94 ? LEU A 104 ? GLY A 94 LEU A 104 A 4 VAL A 65 ? SER A 70 ? VAL A 65 SER A 70 B 1 GLN A 37 ? GLY A 39 ? GLN A 37 GLY A 39 B 2 TYR A 7 ? CYS A 16 ? TYR A 7 CYS A 16 B 3 GLY A 94 ? LEU A 104 ? GLY A 94 LEU A 104 B 4 LEU A 75 ? LYS A 78 ? LEU A 75 LYS A 78 C 1 TRP A 33 ? GLN A 34 ? TRP A 33 GLN A 34 C 2 GLN A 21 ? ARG A 27 ? GLN A 21 ARG A 27 C 3 PHE A 121 ? SER A 128 ? PHE A 121 SER A 128 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLY A 38 ? O GLY A 38 N VAL A 11 ? N VAL A 11 A 2 3 N VAL A 14 ? N VAL A 14 O LEU A 102 ? O LEU A 102 A 3 4 O LEU A 101 ? O LEU A 101 N LEU A 68 ? N LEU A 68 B 1 2 O GLY A 38 ? O GLY A 38 N VAL A 11 ? N VAL A 11 B 2 3 N VAL A 14 ? N VAL A 14 O LEU A 102 ? O LEU A 102 B 3 4 O GLN A 97 ? O GLN A 97 N LEU A 75 ? N LEU A 75 C 1 2 O GLN A 34 ? O GLN A 34 N ALA A 25 ? N ALA A 25 C 2 3 N VAL A 22 ? N VAL A 22 O VAL A 127 ? O VAL A 127 # _atom_sites.entry_id 2KDV _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 ILE 2 2 2 ILE ILE A . n A 1 3 ASP 3 3 3 ASP ASP A . n A 1 4 ASP 4 4 4 ASP ASP A . n A 1 5 ASP 5 5 5 ASP ASP A . n A 1 6 GLY 6 6 6 GLY GLY A . n A 1 7 TYR 7 7 7 TYR TYR A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 ASN 10 10 10 ASN ASN A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 CYS 16 16 16 CYS CYS A . n A 1 17 ASN 17 17 17 ASN ASN A . n A 1 18 ARG 18 18 18 ARG ARG A . n A 1 19 GLN 19 19 19 GLN GLN A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 GLN 21 21 21 GLN GLN A . n A 1 22 VAL 22 22 22 VAL VAL A . n A 1 23 MET 23 23 23 MET MET A . n A 1 24 TRP 24 24 24 TRP TRP A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 ARG 26 26 26 ARG ARG A . n A 1 27 ARG 27 27 27 ARG ARG A . n A 1 28 PHE 28 28 28 PHE PHE A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 GLN 30 30 30 GLN GLN A . n A 1 31 HIS 31 31 31 HIS HIS A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 TRP 33 33 33 TRP TRP A . n A 1 34 GLN 34 34 34 GLN GLN A . n A 1 35 PHE 35 35 35 PHE PHE A . n A 1 36 PRO 36 36 36 PRO PRO A . n A 1 37 GLN 37 37 37 GLN GLN A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 ILE 40 40 40 ILE ILE A . n A 1 41 ASN 41 41 41 ASN ASN A . n A 1 42 PRO 42 42 42 PRO PRO A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 GLU 44 44 44 GLU GLU A . n A 1 45 SER 45 45 45 SER SER A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 GLU 47 47 47 GLU GLU A . n A 1 48 GLN 48 48 48 GLN GLN A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 MET 50 50 50 MET MET A . n A 1 51 TYR 51 51 51 TYR TYR A . n A 1 52 ARG 52 52 52 ARG ARG A . n A 1 53 GLU 53 53 53 GLU GLU A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 PHE 55 55 55 PHE PHE A . n A 1 56 GLU 56 56 56 GLU GLU A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 VAL 58 58 58 VAL VAL A . n A 1 59 GLY 59 59 59 GLY GLY A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 SER 61 61 61 SER SER A . n A 1 62 ARG 62 62 62 ARG ARG A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 ASP 64 64 64 ASP ASP A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 ARG 66 66 66 ARG ARG A . n A 1 67 ILE 67 67 67 ILE ILE A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 ALA 69 69 69 ALA ALA A . n A 1 70 SER 70 70 70 SER SER A . n A 1 71 THR 71 71 71 THR THR A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 ASN 73 73 73 ASN ASN A . n A 1 74 TRP 74 74 74 TRP TRP A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 ARG 76 76 76 ARG ARG A . n A 1 77 TYR 77 77 77 TYR TYR A . n A 1 78 LYS 78 78 78 LYS LYS A . n A 1 79 LEU 79 79 79 LEU LEU A . n A 1 80 PRO 80 80 80 PRO PRO A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 ARG 82 82 82 ARG ARG A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 VAL 84 84 84 VAL VAL A . n A 1 85 ARG 85 85 85 ARG ARG A . n A 1 86 TRP 86 86 86 TRP TRP A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 THR 88 88 88 THR THR A . n A 1 89 LYS 89 89 89 LYS LYS A . n A 1 90 PRO 90 90 90 PRO PRO A . n A 1 91 VAL 91 91 91 VAL VAL A . n A 1 92 CYS 92 92 92 CYS CYS A . n A 1 93 ILE 93 93 93 ILE ILE A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 GLN 95 95 95 GLN GLN A . n A 1 96 LYS 96 96 96 LYS LYS A . n A 1 97 GLN 97 97 97 GLN GLN A . n A 1 98 LYS 98 98 98 LYS LYS A . n A 1 99 TRP 99 99 99 TRP TRP A . n A 1 100 PHE 100 100 100 PHE PHE A . n A 1 101 LEU 101 101 101 LEU LEU A . n A 1 102 LEU 102 102 102 LEU LEU A . n A 1 103 GLN 103 103 103 GLN GLN A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 VAL 105 105 105 VAL VAL A . n A 1 106 SER 106 106 106 SER SER A . n A 1 107 GLY 107 107 107 GLY GLY A . n A 1 108 ASP 108 108 108 ASP ASP A . n A 1 109 ALA 109 109 109 ALA ALA A . n A 1 110 GLU 110 110 110 GLU GLU A . n A 1 111 ILE 111 111 111 ILE ILE A . n A 1 112 ASN 112 112 112 ASN ASN A . n A 1 113 MET 113 113 113 MET MET A . n A 1 114 GLN 114 114 114 GLN GLN A . n A 1 115 THR 115 115 115 THR THR A . n A 1 116 SER 116 116 116 SER SER A . n A 1 117 SER 117 117 117 SER SER A . n A 1 118 THR 118 118 118 THR THR A . n A 1 119 PRO 119 119 119 PRO PRO A . n A 1 120 GLU 120 120 120 GLU GLU A . n A 1 121 PHE 121 121 121 PHE PHE A . n A 1 122 ASP 122 122 122 ASP ASP A . n A 1 123 GLY 123 123 123 GLY GLY A . n A 1 124 TRP 124 124 124 TRP TRP A . n A 1 125 ARG 125 125 125 ARG ARG A . n A 1 126 TRP 126 126 126 TRP TRP A . n A 1 127 VAL 127 127 127 VAL VAL A . n A 1 128 SER 128 128 128 SER SER A . n A 1 129 TYR 129 129 129 TYR TYR A . n A 1 130 TRP 130 130 130 TRP TRP A . n A 1 131 TYR 131 131 131 TYR TYR A . n A 1 132 PRO 132 132 132 PRO PRO A . n A 1 133 VAL 133 133 133 VAL VAL A . n A 1 134 ARG 134 134 134 ARG ARG A . n A 1 135 GLN 135 135 135 GLN GLN A . n A 1 136 VAL 136 136 136 VAL VAL A . n A 1 137 VAL 137 137 137 VAL VAL A . n A 1 138 SER 138 138 138 SER SER A . n A 1 139 PHE 139 139 139 PHE PHE A . n A 1 140 LYS 140 140 140 LYS LYS A . n A 1 141 ARG 141 141 141 ARG ARG A . n A 1 142 ASP 142 142 142 ASP ASP A . n A 1 143 VAL 143 143 143 VAL VAL A . n A 1 144 TYR 144 144 144 TYR TYR A . n A 1 145 ARG 145 145 145 ARG ARG A . n A 1 146 ARG 146 146 146 ARG ARG A . n A 1 147 VAL 147 147 147 VAL VAL A . n A 1 148 MET 148 148 148 MET MET A . n A 1 149 LYS 149 149 149 LYS LYS A . n A 1 150 GLU 150 150 150 GLU GLU A . n A 1 151 PHE 151 151 151 PHE PHE A . n A 1 152 ALA 152 152 152 ALA ALA A . n A 1 153 SER 153 153 153 SER SER A . n A 1 154 VAL 154 154 154 VAL VAL A . n A 1 155 VAL 155 155 155 VAL VAL A . n A 1 156 MET 156 156 156 MET MET A . n A 1 157 SER 157 157 157 SER SER A . n A 1 158 LEU 158 158 158 LEU LEU A . n A 1 159 GLN 159 159 159 GLN GLN A . n A 1 160 GLU 160 160 160 GLU GLU A . n A 1 161 ASN 161 161 161 ASN ASN A . n A 1 162 THR 162 162 162 THR THR A . n A 1 163 PRO 163 163 163 PRO PRO A . n A 1 164 LYS 164 164 164 LYS LYS A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-01-26 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_nmr_spectrometer 4 3 'Structure model' pdbx_struct_assembly 5 3 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_software.name' 4 3 'Structure model' '_pdbx_nmr_spectrometer.model' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'sodium acetate-1' 50 ? mM ? 1 'sodium chloride-2' 20 ? mM ? 1 DTT-3 40 ? mM ? 1 arginine-4 10 ? mM ? 1 glutamic-5 10 ? mM ? 1 'RppH protein-6' 0.8 ? mM '[U-13C; U-15N]' 1 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HE1 A TRP 24 ? ? HB3 A TRP 33 ? ? 1.34 2 3 OD1 A ASP 64 ? ? HG A SER 106 ? ? 1.56 3 4 OD1 A ASP 64 ? ? HG A SER 106 ? ? 1.56 4 5 OD1 A ASP 64 ? ? HG A SER 106 ? ? 1.55 5 6 OD1 A ASP 64 ? ? HG A SER 106 ? ? 1.55 6 7 OD1 A ASP 64 ? ? HG A SER 106 ? ? 1.56 7 8 OD1 A ASP 64 ? ? HG A SER 106 ? ? 1.56 8 9 OD1 A ASP 64 ? ? HG A SER 106 ? ? 1.56 9 10 OD1 A ASP 64 ? ? HG A SER 106 ? ? 1.59 10 11 OD1 A ASP 64 ? ? HG A SER 106 ? ? 1.56 11 12 OD1 A ASP 64 ? ? HG A SER 106 ? ? 1.56 12 13 OD1 A ASP 64 ? ? HG A SER 106 ? ? 1.57 13 14 OD1 A ASP 64 ? ? HG A SER 106 ? ? 1.56 14 16 OD1 A ASP 64 ? ? HG A SER 106 ? ? 1.56 15 17 OD1 A ASP 64 ? ? HG A SER 106 ? ? 1.58 16 18 OD1 A ASP 64 ? ? HG A SER 106 ? ? 1.55 17 19 OD1 A ASP 64 ? ? HG A SER 106 ? ? 1.57 18 20 OD1 A ASP 64 ? ? HG A SER 106 ? ? 1.55 19 21 OD1 A ASP 64 ? ? HG A SER 106 ? ? 1.57 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CD _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 PRO _pdbx_validate_rmsd_bond.auth_seq_id_1 163 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 N _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 PRO _pdbx_validate_rmsd_bond.auth_seq_id_2 163 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.375 _pdbx_validate_rmsd_bond.bond_target_value 1.474 _pdbx_validate_rmsd_bond.bond_deviation -0.099 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.014 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A MET 1 ? ? CB A MET 1 ? ? CG A MET 1 ? ? 124.26 113.30 10.96 1.70 N 2 1 CB A TYR 7 ? ? CG A TYR 7 ? ? CD2 A TYR 7 ? ? 116.47 121.00 -4.53 0.60 N 3 1 CD A ARG 8 ? ? NE A ARG 8 ? ? CZ A ARG 8 ? ? 136.19 123.60 12.59 1.40 N 4 1 NE A ARG 8 ? ? CZ A ARG 8 ? ? NH1 A ARG 8 ? ? 126.78 120.30 6.48 0.50 N 5 1 NE A ARG 8 ? ? CZ A ARG 8 ? ? NH2 A ARG 8 ? ? 111.24 120.30 -9.06 0.50 N 6 1 CD A ARG 18 ? ? NE A ARG 18 ? ? CZ A ARG 18 ? ? 132.59 123.60 8.99 1.40 N 7 1 NE A ARG 18 ? ? CZ A ARG 18 ? ? NH1 A ARG 18 ? ? 127.37 120.30 7.07 0.50 N 8 1 NE A ARG 18 ? ? CZ A ARG 18 ? ? NH2 A ARG 18 ? ? 113.73 120.30 -6.57 0.50 N 9 1 CB A TRP 24 ? ? CG A TRP 24 ? ? CD2 A TRP 24 ? ? 138.07 126.60 11.47 1.30 N 10 1 CD1 A TRP 24 ? ? CG A TRP 24 ? ? CD2 A TRP 24 ? ? 98.56 106.30 -7.74 0.80 N 11 1 CD1 A TRP 24 ? ? NE1 A TRP 24 ? ? CE2 A TRP 24 ? ? 116.66 109.00 7.66 0.90 N 12 1 NE1 A TRP 24 ? ? CE2 A TRP 24 ? ? CD2 A TRP 24 ? ? 96.62 107.30 -10.68 1.00 N 13 1 CE2 A TRP 24 ? ? CD2 A TRP 24 ? ? CE3 A TRP 24 ? ? 106.54 118.70 -12.16 1.20 N 14 1 CE2 A TRP 24 ? ? CD2 A TRP 24 ? ? CG A TRP 24 ? ? 113.20 107.30 5.90 0.80 N 15 1 CZ3 A TRP 24 ? ? CH2 A TRP 24 ? ? CZ2 A TRP 24 ? ? 103.67 121.60 -17.93 1.20 N 16 1 CH2 A TRP 24 ? ? CZ2 A TRP 24 ? ? CE2 A TRP 24 ? ? 105.86 117.40 -11.54 1.00 N 17 1 NE A ARG 26 ? ? CZ A ARG 26 ? ? NH2 A ARG 26 ? ? 114.90 120.30 -5.40 0.50 N 18 1 NE A ARG 27 ? ? CZ A ARG 27 ? ? NH1 A ARG 27 ? ? 124.76 120.30 4.46 0.50 N 19 1 NE A ARG 27 ? ? CZ A ARG 27 ? ? NH2 A ARG 27 ? ? 113.35 120.30 -6.95 0.50 N 20 1 CA A TRP 33 ? ? CB A TRP 33 ? ? CG A TRP 33 ? ? 135.75 113.70 22.05 1.90 N 21 1 NE A ARG 52 ? ? CZ A ARG 52 ? ? NH2 A ARG 52 ? ? 116.44 120.30 -3.86 0.50 N 22 1 CG1 A VAL 58 ? ? CB A VAL 58 ? ? CG2 A VAL 58 ? ? 99.85 110.90 -11.05 1.60 N 23 1 CA A VAL 58 ? ? CB A VAL 58 ? ? CG2 A VAL 58 ? ? 120.06 110.90 9.16 1.50 N 24 1 NE A ARG 62 ? ? CZ A ARG 62 ? ? NH2 A ARG 62 ? ? 116.18 120.30 -4.12 0.50 N 25 1 NE A ARG 66 ? ? CZ A ARG 66 ? ? NH1 A ARG 66 ? ? 123.37 120.30 3.07 0.50 N 26 1 NE A ARG 66 ? ? CZ A ARG 66 ? ? NH2 A ARG 66 ? ? 115.97 120.30 -4.33 0.50 N 27 1 NE A ARG 76 ? ? CZ A ARG 76 ? ? NH2 A ARG 76 ? ? 115.95 120.30 -4.35 0.50 N 28 1 CB A TYR 77 ? ? CG A TYR 77 ? ? CD1 A TYR 77 ? ? 116.46 121.00 -4.54 0.60 N 29 1 CB A TYR 129 ? ? CG A TYR 129 ? ? CD2 A TYR 129 ? ? 115.95 121.00 -5.05 0.60 N 30 1 CB A TYR 131 ? ? CG A TYR 131 ? ? CD1 A TYR 131 ? ? 116.20 121.00 -4.80 0.60 N 31 1 CA A PRO 132 ? ? CB A PRO 132 ? ? CG A PRO 132 ? ? 116.42 104.80 11.62 1.90 N 32 1 NE A ARG 134 ? ? CZ A ARG 134 ? ? NH2 A ARG 134 ? ? 115.36 120.30 -4.94 0.50 N 33 1 CD A ARG 141 ? ? NE A ARG 141 ? ? CZ A ARG 141 ? ? 114.70 123.60 -8.90 1.40 N 34 1 NE A ARG 141 ? ? CZ A ARG 141 ? ? NH2 A ARG 141 ? ? 116.64 120.30 -3.66 0.50 N 35 1 NE A ARG 145 ? ? CZ A ARG 145 ? ? NH1 A ARG 145 ? ? 123.91 120.30 3.61 0.50 N 36 1 NE A ARG 145 ? ? CZ A ARG 145 ? ? NH2 A ARG 145 ? ? 113.77 120.30 -6.53 0.50 N 37 1 CD1 A PHE 151 ? ? CG A PHE 151 ? ? CD2 A PHE 151 ? ? 104.52 118.30 -13.78 1.30 N 38 1 CG A PHE 151 ? ? CD1 A PHE 151 ? ? CE1 A PHE 151 ? ? 111.79 120.80 -9.01 1.10 N 39 1 CA A THR 162 ? ? CB A THR 162 ? ? CG2 A THR 162 ? ? 101.48 112.40 -10.92 1.40 N 40 1 N A PRO 163 ? ? CA A PRO 163 ? ? CB A PRO 163 ? ? 111.04 103.30 7.74 1.20 N 41 1 CA A PRO 163 ? ? C A PRO 163 ? ? N A LYS 164 ? ? 100.31 117.20 -16.89 2.20 Y 42 2 C A THR 162 ? ? N A PRO 163 ? ? CA A PRO 163 ? ? 129.59 119.30 10.29 1.50 Y 43 3 NE A ARG 145 ? ? CZ A ARG 145 ? ? NH2 A ARG 145 ? ? 117.28 120.30 -3.02 0.50 N 44 4 NE A ARG 145 ? ? CZ A ARG 145 ? ? NH2 A ARG 145 ? ? 117.30 120.30 -3.00 0.50 N 45 5 NE A ARG 52 ? ? CZ A ARG 52 ? ? NH2 A ARG 52 ? ? 116.71 120.30 -3.59 0.50 N 46 7 NE A ARG 52 ? ? CZ A ARG 52 ? ? NH2 A ARG 52 ? ? 117.18 120.30 -3.12 0.50 N 47 12 NE A ARG 27 ? ? CZ A ARG 27 ? ? NH2 A ARG 27 ? ? 116.92 120.30 -3.38 0.50 N 48 17 NE A ARG 27 ? ? CZ A ARG 27 ? ? NH1 A ARG 27 ? ? 123.99 120.30 3.69 0.50 N 49 19 NE A ARG 145 ? ? CZ A ARG 145 ? ? NH2 A ARG 145 ? ? 117.28 120.30 -3.02 0.50 N 50 21 NE A ARG 26 ? ? CZ A ARG 26 ? ? NH2 A ARG 26 ? ? 117.10 120.30 -3.20 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 4 ? ? -164.16 -53.00 2 1 ARG A 85 ? ? -103.15 75.44 3 1 THR A 162 ? ? 26.03 62.09 4 2 ASP A 3 ? ? -72.18 -72.87 5 2 ASP A 4 ? ? -162.25 -49.96 6 2 GLN A 114 ? ? -147.66 33.02 7 2 THR A 162 ? ? 48.63 26.65 8 2 PRO A 163 ? ? 12.95 49.84 9 3 ASP A 4 ? ? -163.90 -50.47 10 3 GLU A 57 ? ? -94.39 -60.85 11 3 GLU A 110 ? ? -90.49 50.96 12 4 ILE A 2 ? ? 64.81 129.20 13 4 ASP A 4 ? ? -163.43 -51.28 14 4 GLN A 114 ? ? -117.69 75.29 15 5 ILE A 2 ? ? 67.50 135.15 16 5 ASP A 4 ? ? -164.14 -49.43 17 5 ASN A 112 ? ? -120.34 -52.73 18 5 GLN A 114 ? ? -153.79 78.46 19 5 PRO A 163 ? ? -67.41 -178.49 20 6 ASP A 4 ? ? -164.00 -50.47 21 6 THR A 162 ? ? -143.90 59.31 22 7 ASP A 4 ? ? -164.09 -49.54 23 7 HIS A 31 ? ? 65.06 -23.38 24 7 GLN A 114 ? ? -119.19 71.84 25 7 THR A 162 ? ? -142.22 50.10 26 8 ASP A 4 ? ? -164.47 -49.76 27 8 GLU A 120 ? ? -76.62 32.50 28 8 ASP A 122 ? ? -149.75 17.48 29 8 THR A 162 ? ? 39.60 64.68 30 9 GLN A 114 ? ? -112.73 74.32 31 10 ASP A 4 ? ? -162.21 -53.84 32 10 GLU A 57 ? ? -91.04 -61.09 33 11 ASP A 4 ? ? -164.74 -48.78 34 11 ASN A 112 ? ? -122.23 -51.84 35 11 GLN A 114 ? ? -140.58 29.84 36 11 THR A 162 ? ? 39.35 62.59 37 12 ASP A 4 ? ? -164.74 -48.92 38 13 ASP A 4 ? ? -162.85 -53.42 39 13 GLU A 110 ? ? -82.58 48.08 40 13 GLN A 114 ? ? -151.87 71.03 41 13 THR A 162 ? ? -160.34 79.55 42 13 PRO A 163 ? ? -76.48 22.93 43 14 ILE A 2 ? ? 62.53 117.66 44 14 ASP A 4 ? ? -163.04 -53.31 45 14 HIS A 31 ? ? 64.55 -21.84 46 14 ASN A 112 ? ? -120.60 -50.98 47 14 GLN A 114 ? ? -154.71 76.96 48 14 PRO A 163 ? ? -66.98 -178.93 49 15 ILE A 2 ? ? 66.76 134.76 50 15 ASP A 4 ? ? -163.06 -51.68 51 15 GLN A 114 ? ? -119.80 75.50 52 15 THR A 162 ? ? 73.71 140.61 53 15 PRO A 163 ? ? -80.34 33.46 54 16 ASP A 4 ? ? -164.00 -49.97 55 16 GLU A 160 ? ? -89.56 40.99 56 16 ASN A 161 ? ? 39.21 7.89 57 17 ASP A 3 ? ? -66.48 -77.46 58 17 ASP A 4 ? ? -164.47 -44.94 59 17 GLN A 114 ? ? -102.55 71.81 60 18 ASP A 4 ? ? -147.71 -118.81 61 18 TYR A 7 ? ? 59.40 153.15 62 18 GLN A 114 ? ? -153.26 69.66 63 19 ILE A 2 ? ? 61.43 122.77 64 19 ASP A 4 ? ? -162.68 -52.64 65 19 GLU A 110 ? ? -91.71 51.76 66 19 GLN A 114 ? ? -150.31 73.89 67 19 PRO A 163 ? ? -69.30 -178.88 68 20 ASP A 4 ? ? -163.40 -50.69 69 20 GLN A 114 ? ? -104.91 63.32 70 20 THR A 162 ? ? 38.89 56.44 71 21 ASP A 4 ? ? -163.34 -52.40 72 21 HIS A 31 ? ? 56.18 -0.37 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 ASN _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 161 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 THR _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 162 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -142.57 # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id PRO _pdbx_validate_main_chain_plane.auth_asym_id A _pdbx_validate_main_chain_plane.auth_seq_id 163 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle 12.03 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 ARG A 8 ? ? 0.097 'SIDE CHAIN' 2 1 ARG A 27 ? ? 0.081 'SIDE CHAIN' 3 1 ARG A 62 ? ? 0.251 'SIDE CHAIN' 4 1 TYR A 77 ? ? 0.114 'SIDE CHAIN' 5 1 TYR A 129 ? ? 0.081 'SIDE CHAIN' 6 1 ARG A 141 ? ? 0.253 'SIDE CHAIN' 7 1 PHE A 151 ? ? 0.187 'SIDE CHAIN' 8 2 TYR A 51 ? ? 0.093 'SIDE CHAIN' 9 3 ARG A 27 ? ? 0.078 'SIDE CHAIN' 10 4 TYR A 51 ? ? 0.075 'SIDE CHAIN' 11 5 ARG A 27 ? ? 0.077 'SIDE CHAIN' 12 6 ARG A 27 ? ? 0.078 'SIDE CHAIN' 13 7 TYR A 51 ? ? 0.066 'SIDE CHAIN' 14 9 TYR A 51 ? ? 0.092 'SIDE CHAIN' 15 10 TYR A 51 ? ? 0.070 'SIDE CHAIN' 16 11 ARG A 18 ? ? 0.088 'SIDE CHAIN' 17 12 ARG A 26 ? ? 0.102 'SIDE CHAIN' 18 12 TYR A 51 ? ? 0.063 'SIDE CHAIN' 19 13 ARG A 27 ? ? 0.086 'SIDE CHAIN' 20 13 ARG A 66 ? ? 0.275 'SIDE CHAIN' 21 14 ARG A 27 ? ? 0.108 'SIDE CHAIN' 22 14 TYR A 51 ? ? 0.083 'SIDE CHAIN' 23 15 TYR A 51 ? ? 0.075 'SIDE CHAIN' 24 17 TYR A 51 ? ? 0.092 'SIDE CHAIN' 25 18 ARG A 27 ? ? 0.091 'SIDE CHAIN' 26 18 TYR A 51 ? ? 0.063 'SIDE CHAIN' 27 19 TYR A 51 ? ? 0.080 'SIDE CHAIN' 28 19 ARG A 52 ? ? 0.077 'SIDE CHAIN' 29 19 TYR A 77 ? ? 0.087 'SIDE CHAIN' 30 19 ARG A 146 ? ? 0.078 'SIDE CHAIN' 31 20 TYR A 51 ? ? 0.076 'SIDE CHAIN' 32 20 TYR A 77 ? ? 0.069 'SIDE CHAIN' #