data_2KOZ # _entry.id 2KOZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2KOZ pdb_00002koz 10.2210/pdb2koz/pdb RCSB RCSB101392 ? ? WWPDB D_1000101392 ? ? BMRB 16539 ? ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 2kp0 PDB 'Solution structure of nasonin-1M' unspecified 16539 BMRB . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2KOZ _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2009-10-04 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kouno, T.' 1 'Tian, C.' 2 'Luo, L.' 3 'Zhu, S.' 4 'Mizuguchi, M.' 5 # _citation.id primary _citation.title 'Solution structure of nasonin-1' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tian, C.' 1 ? primary 'Kouno, T.' 2 ? primary 'Luo, L.' 3 ? primary 'Mizuguchi, M.' 4 ? primary 'Zhu, S.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description nasonin-1 _entity.formula_weight 3566.044 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ACNDRDCSLDCIMKGYNTGSCVRGSCQCRRTSG _entity_poly.pdbx_seq_one_letter_code_can ACNDRDCSLDCIMKGYNTGSCVRGSCQCRRTSG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 CYS n 1 3 ASN n 1 4 ASP n 1 5 ARG n 1 6 ASP n 1 7 CYS n 1 8 SER n 1 9 LEU n 1 10 ASP n 1 11 CYS n 1 12 ILE n 1 13 MET n 1 14 LYS n 1 15 GLY n 1 16 TYR n 1 17 ASN n 1 18 THR n 1 19 GLY n 1 20 SER n 1 21 CYS n 1 22 VAL n 1 23 ARG n 1 24 GLY n 1 25 SER n 1 26 CYS n 1 27 GLN n 1 28 CYS n 1 29 ARG n 1 30 ARG n 1 31 THR n 1 32 SER n 1 33 GLY n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details 'chemically synthesized' # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 2KOZ _struct_ref.pdbx_db_accession 2KOZ _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ACNDRDCSLDCIMKGYNTGSCVRGSCQCRRTSG _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2KOZ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 33 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 2KOZ _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 33 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 33 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D DQF-COSY' 1 2 1 '2D 1H-1H TOCSY' 1 3 1 '2D 1H-1H NOESY' 1 4 2 '2D DQF-COSY' 1 5 2 '2D 1H-1H TOCSY' 1 6 2 '2D 1H-1H NOESY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pH 3.5 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '0.25-0.30mM Nasonin-1; 50mM [U-100% 2H] acetic acid; 20mM sodium chloride; 5% [U-100% 2H] D2O; 95% H2O/5% D2O' 1 '95% H2O/5% D2O' '0.25-0.30mM Nasonin-1; 50mM [U-100% 2H] acetic acid; 20mM sodium chloride; 100% [U-100% 2H] D2O; 100% D2O' 2 '100% D2O' # _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2KOZ _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 25 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2KOZ _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.representative_conformer 1 _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2KOZ _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Bruker Biospin' collection XwinNMR ? 1 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe ? 2 Goddard 'peak picking' Sparky ? 3 Brunger 'structure solution' X-PLOR ? 4 Brunger refinement X-PLOR ? 5 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2KOZ _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2KOZ _struct.title 'Solution structure of nasonin-1' _struct.pdbx_model_details 'lowest energy, model 1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2KOZ _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' _struct_keywords.text 'alpha/beta structure, disulfide bonds, DE NOVO PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id ASN _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 3 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id GLY _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 15 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id ASN _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 3 _struct_conf.end_auth_comp_id GLY _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 15 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 2 SG ? ? ? 1_555 A CYS 21 SG ? ? A CYS 2 A CYS 21 1_555 ? ? ? ? ? ? ? 2.021 ? ? disulf2 disulf ? ? A CYS 7 SG ? ? ? 1_555 A CYS 26 SG ? ? A CYS 7 A CYS 26 1_555 ? ? ? ? ? ? ? 2.020 ? ? disulf3 disulf ? ? A CYS 11 SG ? ? ? 1_555 A CYS 28 SG ? ? A CYS 11 A CYS 28 1_555 ? ? ? ? ? ? ? 2.020 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 18 ? VAL A 22 ? THR A 18 VAL A 22 A 2 SER A 25 ? ARG A 29 ? SER A 25 ARG A 29 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id THR _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 18 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id THR _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 18 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id ARG _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 29 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id ARG _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 29 # _atom_sites.entry_id 2KOZ _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 CYS 2 2 2 CYS CYS A . n A 1 3 ASN 3 3 3 ASN ASN A . n A 1 4 ASP 4 4 4 ASP ASP A . n A 1 5 ARG 5 5 5 ARG ARG A . n A 1 6 ASP 6 6 6 ASP ASP A . n A 1 7 CYS 7 7 7 CYS CYS A . n A 1 8 SER 8 8 8 SER SER A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 ASP 10 10 10 ASP ASP A . n A 1 11 CYS 11 11 11 CYS CYS A . n A 1 12 ILE 12 12 12 ILE ILE A . n A 1 13 MET 13 13 13 MET MET A . n A 1 14 LYS 14 14 14 LYS LYS A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 TYR 16 16 16 TYR TYR A . n A 1 17 ASN 17 17 17 ASN ASN A . n A 1 18 THR 18 18 18 THR THR A . n A 1 19 GLY 19 19 19 GLY GLY A . n A 1 20 SER 20 20 20 SER SER A . n A 1 21 CYS 21 21 21 CYS CYS A . n A 1 22 VAL 22 22 22 VAL VAL A . n A 1 23 ARG 23 23 23 ARG ARG A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 CYS 26 26 26 CYS CYS A . n A 1 27 GLN 27 27 27 GLN GLN A . n A 1 28 CYS 28 28 28 CYS CYS A . n A 1 29 ARG 29 29 29 ARG ARG A . n A 1 30 ARG 30 30 30 ARG ARG A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 GLY 33 33 33 GLY GLY A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-10-06 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2020-02-26 4 'Structure model' 1 3 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' Other 5 4 'Structure model' 'Database references' 6 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_database_status 3 3 'Structure model' pdbx_nmr_software 4 3 'Structure model' pdbx_nmr_spectrometer 5 4 'Structure model' database_2 6 4 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_pdbx_database_status.status_code_cs' 2 3 'Structure model' '_pdbx_nmr_software.name' 3 3 'Structure model' '_pdbx_nmr_spectrometer.model' 4 4 'Structure model' '_database_2.pdbx_DOI' 5 4 'Structure model' '_database_2.pdbx_database_accession' 6 4 'Structure model' '_pdbx_database_status.status_code_nmr_data' # _pdbx_entry_details.entry_id 2KOZ _pdbx_entry_details.compound_details 'NASONIN-1 IS A NEWLY DESIGNED PEPTIDE WITH NEUROTOXIC AND ANTIMICROBIAL ACTIVITIES.' _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id Nasonin-1-1 ? 0.25-0.30 mM ? 1 'acetic acid-2' 50 ? mM '[U-100% 2H]' 1 'sodium chloride-3' 20 ? mM ? 1 D2O-4 5 ? % '[U-100% 2H]' 1 Nasonin-1-5 ? 0.25-0.30 mM ? 2 'acetic acid-6' 50 ? mM '[U-100% 2H]' 2 'sodium chloride-7' 20 ? mM ? 2 D2O-8 100 ? % '[U-100% 2H]' 2 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 2 O A THR 18 ? ? H A ARG 29 ? ? 1.58 2 3 O A CYS 7 ? ? H A CYS 11 ? ? 1.56 3 5 O A THR 18 ? ? H A ARG 29 ? ? 1.55 4 6 O A THR 18 ? ? H A ARG 29 ? ? 1.58 5 6 O A VAL 22 ? ? H A SER 25 ? ? 1.59 6 7 O A VAL 22 ? ? H A SER 25 ? ? 1.59 7 8 O A CYS 7 ? ? H A CYS 11 ? ? 1.55 8 9 O A CYS 7 ? ? H A CYS 11 ? ? 1.54 9 9 H A ASN 17 ? ? O A ARG 29 ? ? 1.59 10 10 O A THR 18 ? ? H A ARG 29 ? ? 1.59 11 12 O A THR 18 ? ? H A ARG 29 ? ? 1.58 12 15 O A VAL 22 ? ? H A SER 25 ? ? 1.59 13 18 O A THR 18 ? ? H A ARG 29 ? ? 1.58 14 21 O A THR 18 ? ? H A ARG 29 ? ? 1.58 15 22 O A THR 18 ? ? H A ARG 29 ? ? 1.58 16 23 O A THR 18 ? ? H A ARG 29 ? ? 1.57 17 25 O A CYS 7 ? ? H A CYS 11 ? ? 1.57 18 25 O A THR 18 ? ? H A ARG 29 ? ? 1.59 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 16 ? ? -88.61 -146.73 2 1 ASN A 17 ? ? -130.24 -35.83 3 1 ARG A 23 ? ? 43.09 26.80 4 1 SER A 25 ? ? -129.11 -158.69 5 1 THR A 31 ? ? -111.43 77.15 6 2 TYR A 16 ? ? -89.19 -136.08 7 2 ASN A 17 ? ? -134.02 -36.05 8 2 ARG A 23 ? ? 47.07 25.02 9 2 SER A 25 ? ? -133.54 -156.09 10 3 TYR A 16 ? ? -96.73 -151.22 11 3 SER A 25 ? ? -125.10 -164.22 12 3 SER A 32 ? ? -133.82 -60.76 13 4 ASN A 3 ? ? 68.02 98.71 14 4 TYR A 16 ? ? -88.67 -146.12 15 4 SER A 20 ? ? -165.49 -169.35 16 4 ARG A 23 ? ? 60.44 -81.09 17 4 SER A 25 ? ? -145.14 -147.44 18 5 CYS A 2 ? ? -73.75 -163.87 19 5 ASN A 3 ? ? 176.75 137.88 20 5 TYR A 16 ? ? -94.17 -153.69 21 5 SER A 25 ? ? -133.21 -149.42 22 6 TYR A 16 ? ? -105.00 -110.10 23 6 ASN A 17 ? ? -163.54 -35.38 24 6 SER A 25 ? ? -119.76 -162.66 25 7 TYR A 16 ? ? -114.75 -138.83 26 7 ASN A 17 ? ? -131.68 -34.70 27 7 SER A 25 ? ? -122.98 -162.61 28 7 ARG A 30 ? ? -100.66 -150.74 29 8 TYR A 16 ? ? -88.69 -154.86 30 8 SER A 32 ? ? -148.64 50.82 31 9 TYR A 16 ? ? -88.41 -141.33 32 9 ARG A 23 ? ? 58.78 -82.16 33 10 TYR A 16 ? ? -88.61 -147.16 34 10 THR A 18 ? ? -175.89 -174.17 35 10 ARG A 23 ? ? 56.67 -83.44 36 10 SER A 25 ? ? -143.36 -151.09 37 10 ARG A 30 ? ? -88.18 -154.92 38 10 SER A 32 ? ? -166.97 92.03 39 11 TYR A 16 ? ? -113.01 -153.59 40 11 SER A 25 ? ? -136.30 -152.39 41 12 TYR A 16 ? ? -88.68 -149.91 42 12 THR A 18 ? ? -174.67 -174.15 43 12 ARG A 23 ? ? 62.12 -75.44 44 12 SER A 25 ? ? -147.42 -152.76 45 12 SER A 32 ? ? -163.56 74.08 46 13 ASN A 3 ? ? -39.51 145.15 47 13 TYR A 16 ? ? -88.89 -150.05 48 13 SER A 25 ? ? -123.19 -160.26 49 13 ARG A 30 ? ? -90.69 58.30 50 14 ASN A 3 ? ? -39.33 146.80 51 14 TYR A 16 ? ? -88.93 -147.06 52 14 SER A 25 ? ? -124.53 -162.12 53 14 ARG A 30 ? ? -91.80 -147.92 54 15 TYR A 16 ? ? -112.75 -154.09 55 15 THR A 18 ? ? -175.33 -169.15 56 15 SER A 25 ? ? -123.98 -145.60 57 15 ARG A 30 ? ? -107.35 68.89 58 16 CYS A 2 ? ? -69.76 -164.53 59 16 TYR A 16 ? ? -88.45 -143.09 60 16 ASN A 17 ? ? -132.82 -33.51 61 16 SER A 20 ? ? -166.01 -165.49 62 16 SER A 25 ? ? -120.66 -153.26 63 17 TYR A 16 ? ? -88.49 -143.46 64 17 ARG A 23 ? ? 62.95 -73.37 65 17 SER A 25 ? ? -134.45 -155.94 66 17 THR A 31 ? ? -94.61 34.19 67 18 ASN A 3 ? ? 60.14 101.64 68 18 TYR A 16 ? ? -91.23 -151.82 69 18 SER A 20 ? ? -166.54 -165.78 70 18 SER A 25 ? ? -135.65 -153.10 71 19 ASN A 3 ? ? 49.71 104.51 72 19 TYR A 16 ? ? -88.49 -152.02 73 19 SER A 25 ? ? -134.59 -156.77 74 19 ARG A 30 ? ? -96.57 -146.18 75 20 TYR A 16 ? ? -88.80 -140.23 76 20 THR A 18 ? ? -169.98 -161.66 77 20 SER A 25 ? ? -125.14 -156.51 78 21 ASN A 3 ? ? 64.21 115.15 79 21 TYR A 16 ? ? -88.77 -146.50 80 21 ASN A 17 ? ? -130.53 -31.19 81 21 SER A 25 ? ? -140.63 -152.69 82 22 TYR A 16 ? ? -88.53 -148.24 83 22 ASN A 17 ? ? -130.59 -35.48 84 23 ASN A 3 ? ? 67.85 116.26 85 23 TYR A 16 ? ? -88.74 -148.03 86 23 ARG A 23 ? ? 42.46 27.05 87 23 SER A 25 ? ? -129.03 -163.52 88 23 THR A 31 ? ? -106.38 53.65 89 24 TYR A 16 ? ? -88.54 -155.58 90 24 SER A 25 ? ? -135.60 -153.93 91 25 TYR A 16 ? ? -88.81 -147.71 92 25 ASN A 17 ? ? -130.91 -32.66 93 25 SER A 25 ? ? -121.36 -164.57 94 25 ARG A 30 ? ? -100.93 62.48 #