HEADER CALCIUM BINDING PROTEIN 12-JUL-10 2L0P TITLE SOLUTION STRUCTURE OF HUMAN APO-S100A1 PROTEIN BY NMR SPECTROSCOPY COMPND MOL_ID: 1; COMPND 2 MOLECULE: S100 CALCIUM BINDING PROTEIN A1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 54-147; COMPND 5 SYNONYM: S100 CALCIUM BINDING PROTEIN A1, ISOFORM CRA_A; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: S100A1, RP1-178F15.1-003, HCG_15470; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET30A+ KEYWDS S100A1, CALCIUM BINDING PROTEIN, EF-HAND, S100 FAMILY EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR M.NOWAKOWSKI,L.JAREMKO,M.JAREMKO,A.BIERZYNSKI,I.ZHUKOV,A.EJCHART REVDAT 3 22-FEB-17 2L0P 1 REMARK VERSN REVDAT 2 27-APR-11 2L0P 1 JRNL REVDAT 1 20-APR-11 2L0P 0 JRNL AUTH M.NOWAKOWSKI,L.JAREMKO,M.JAREMKO,I.ZHUKOV,A.BELCZYK, JRNL AUTH 2 A.BIERZYNSKI,A.EJCHART JRNL TITL SOLUTION NMR STRUCTURE AND DYNAMICS OF HUMAN APO-S100A1 JRNL TITL 2 PROTEIN. JRNL REF J.STRUCT.BIOL. V. 174 391 2011 JRNL REFN ISSN 1047-8477 JRNL PMID 21296671 JRNL DOI 10.1016/J.JSB.2011.01.011 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: STANDRAD SA.INP XPLOR PROTOCOL REMARK 4 REMARK 4 2L0P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JUL-10. REMARK 100 THE RCSB ID CODE IS RCSB101809. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 310 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : 1 MM [U-98% 13C; U-98% 15N] REMARK 210 S100A1, 0.1 MM SODIUM AZIDE, 50 REMARK 210 MM TRIS-D11, 1 MM EDTA, 50 MM REMARK 210 SODIUM CHLORIDE, 90% H2O/10% D2O; REMARK 210 1 MM [U-98% 15N] S100A1, 0.1 MM REMARK 210 SODIUM AZIDE, 50 MM TRIS(D11), 1 REMARK 210 MM EDTA-13, 15 MM SODIUM REMARK 210 CHLORIDE, 90% H2O/10% D2O; 1 MM REMARK 210 [U-98% 13C; U-98% 15N] S100A1, 1 REMARK 210 MM [U-98% 13C; U-98% 15N] S100A1, REMARK 210 0.1 MM SODIUM AZIDE, 50 MM TRIS- REMARK 210 D11, 1 MM EDTA, 50 MM SODIUM REMARK 210 CHLORIDE, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCO; 3D REMARK 210 HNCA; 3D HN(CO)CA; 3D (HCA)CO(CA) REMARK 210 NH; 3D CBCA(CO)NH; 3D HNCACB; 3D REMARK 210 C(CO)NH; 3D HBHA(CO)NH; 3D HCCH- REMARK 210 TOCSY; 2D 1H-15N HSQC (T1); 2D 1H REMARK 210 -15N HSQC (T2); 2D 1H-15N HSQC REMARK 210 BASED NOE; 2D 1H-13C HSQC REMARK 210 AROMATIC; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 3D 1H-13C REMARK 210 HSQC(AROMATIC)-NOESY; 3D 1H-13C REMARK 210 HSQC(ALIPHATIC)-NOESY; 3D 1H-15N REMARK 210 HSQC-NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 400 MHZ; 500 MHZ; 700 MHZ; 800 REMARK 210 MHZ REMARK 210 SPECTROMETER MODEL : INOVA; UNITYPLUS; VARIAN NMR REMARK 210 SYSTEMS REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 3.112, SPARKY, X-PLOR_ REMARK 210 NIH 2.2.5, CYANA 2.1 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 130 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2702 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10825 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.6 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 MET A 0 REMARK 465 MET B 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 21 -110.80 -65.32 REMARK 500 1 ASP A 24 -61.85 -140.02 REMARK 500 1 LYS A 25 -64.65 -139.84 REMARK 500 1 LEU A 45 -4.49 -55.06 REMARK 500 1 ASP A 66 -24.05 -37.78 REMARK 500 1 VAL A 69 -153.95 -92.69 REMARK 500 1 ALA A 84 20.79 -76.87 REMARK 500 1 CYS A 85 -42.71 -141.99 REMARK 500 1 LYS B 21 -110.81 -65.27 REMARK 500 1 ASP B 24 -61.91 -140.01 REMARK 500 1 LYS B 25 -64.71 -139.80 REMARK 500 1 LEU B 45 -4.47 -55.15 REMARK 500 1 ASP B 66 -24.07 -37.79 REMARK 500 1 VAL B 69 -153.22 -93.81 REMARK 500 1 ALA B 84 20.74 -76.84 REMARK 500 1 CYS B 85 -42.86 -141.89 REMARK 500 2 LYS A 21 -75.32 -82.31 REMARK 500 2 LYS A 25 -69.58 -145.17 REMARK 500 2 LEU A 45 -4.99 -53.79 REMARK 500 2 VAL A 69 -154.65 -92.43 REMARK 500 2 LYS B 21 -75.26 -82.30 REMARK 500 2 LYS B 25 -69.62 -145.22 REMARK 500 2 LEU B 45 -4.86 -53.95 REMARK 500 2 VAL B 69 -154.70 -93.47 REMARK 500 3 LYS A 21 -108.53 -58.58 REMARK 500 3 LYS A 25 -50.39 -148.17 REMARK 500 3 ALA A 47 39.24 -96.98 REMARK 500 3 VAL A 69 -154.72 -92.43 REMARK 500 3 LYS B 21 -108.66 -58.62 REMARK 500 3 LYS B 25 -50.47 -148.16 REMARK 500 3 ALA B 47 39.41 -96.87 REMARK 500 3 VAL B 69 -154.36 -93.58 REMARK 500 4 LYS A 21 -73.57 -55.38 REMARK 500 4 LYS A 25 -72.63 -145.58 REMARK 500 4 LEU A 45 -8.56 -55.82 REMARK 500 4 ASN A 64 44.33 -94.31 REMARK 500 4 ASP A 66 -28.87 -36.94 REMARK 500 4 VAL A 69 -154.29 -92.82 REMARK 500 4 GLU A 91 -51.10 -171.60 REMARK 500 4 ASN A 92 97.29 51.06 REMARK 500 4 LYS B 21 -73.53 -55.41 REMARK 500 4 LYS B 25 -72.52 -145.60 REMARK 500 4 LEU B 45 -8.58 -55.84 REMARK 500 4 ASN B 64 44.40 -94.28 REMARK 500 4 ASP B 66 -28.69 -36.93 REMARK 500 4 VAL B 69 -153.86 -94.41 REMARK 500 4 GLU B 91 -51.00 -171.62 REMARK 500 4 ASN B 92 97.25 51.01 REMARK 500 5 GLU A 22 -64.95 -145.72 REMARK 500 5 LYS A 25 -71.85 -154.47 REMARK 500 REMARK 500 THIS ENTRY HAS 266 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 16360 RELATED DB: BMRB REMARK 900 SEQUENCE-SPECIFIC RESONANCE ASSIGNMENTS AND RELAXATION REMARK 900 PARAMETERS FOR HUMAN APO-S100A1(AA) IN THE REDUCED FORM DBREF 2L0P A 0 93 UNP Q5T7Y6 Q5T7Y6_HUMAN 54 147 DBREF 2L0P B 0 93 UNP Q5T7Y6 Q5T7Y6_HUMAN 54 147 SEQRES 1 A 94 MET GLY SER GLU LEU GLU THR ALA MET GLU THR LEU ILE SEQRES 2 A 94 ASN VAL PHE HIS ALA HIS SER GLY LYS GLU GLY ASP LYS SEQRES 3 A 94 TYR LYS LEU SER LYS LYS GLU LEU LYS GLU LEU LEU GLN SEQRES 4 A 94 THR GLU LEU SER GLY PHE LEU ASP ALA GLN LYS ASP VAL SEQRES 5 A 94 ASP ALA VAL ASP LYS VAL MET LYS GLU LEU ASP GLU ASN SEQRES 6 A 94 GLY ASP GLY GLU VAL ASP PHE GLN GLU TYR VAL VAL LEU SEQRES 7 A 94 VAL ALA ALA LEU THR VAL ALA CYS ASN ASN PHE PHE TRP SEQRES 8 A 94 GLU ASN SER SEQRES 1 B 94 MET GLY SER GLU LEU GLU THR ALA MET GLU THR LEU ILE SEQRES 2 B 94 ASN VAL PHE HIS ALA HIS SER GLY LYS GLU GLY ASP LYS SEQRES 3 B 94 TYR LYS LEU SER LYS LYS GLU LEU LYS GLU LEU LEU GLN SEQRES 4 B 94 THR GLU LEU SER GLY PHE LEU ASP ALA GLN LYS ASP VAL SEQRES 5 B 94 ASP ALA VAL ASP LYS VAL MET LYS GLU LEU ASP GLU ASN SEQRES 6 B 94 GLY ASP GLY GLU VAL ASP PHE GLN GLU TYR VAL VAL LEU SEQRES 7 B 94 VAL ALA ALA LEU THR VAL ALA CYS ASN ASN PHE PHE TRP SEQRES 8 B 94 GLU ASN SER HELIX 1 1 SER A 2 GLY A 20 1 19 HELIX 2 2 SER A 29 LEU A 41 1 13 HELIX 3 3 GLY A 43 GLN A 48 1 6 HELIX 4 4 ASP A 50 ASN A 64 1 15 HELIX 5 5 ASP A 70 ASN A 87 1 18 HELIX 6 6 SER B 2 GLY B 20 1 19 HELIX 7 7 SER B 29 LEU B 41 1 13 HELIX 8 8 GLY B 43 GLN B 48 1 6 HELIX 9 9 ASP B 50 ASN B 64 1 15 HELIX 10 10 ASP B 70 ASN B 87 1 18 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1