HEADER TRANSCRIPTION 28-JUL-10 2L1I OBSLTE 08-JUN-16 2L1I 5K5F TITLE NMR STRUCTURE OF THE HLTF HIRAN DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: HLTF PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: HIRAN DOMAIN (UNP RESIDUES 51 TO 171); COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HLTF; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET28A-LIC KEYWDS HIRAN DOMAIN, HLTF, TRANSCRIPTION FACTOR, DNA REPAIR, TRANSCRIPTION KEYWDS 2 REGULATION, TRANSCRIPTION, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS KEYWDS 3 CONSORTIUM, SGC EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR I.BEZSONOVA,D.NECULAI,J.WEIGELT,C.BOUNTRA,A.M.EDWARDS,C.H.ARROWSMITH, AUTHOR 2 S.DHE-PAGANON,STRUCTURAL GENOMICS CONSORTIUM REVDAT 2 08-JUN-16 2L1I 1 OBSLTE VERSN REVDAT 1 20-OCT-10 2L1I 0 JRNL AUTH D.NECULAI,I.BEZSONOVA,J.WEIGELT,C.BOUNTRA,A.EDWARDS, JRNL AUTH 2 C.ARROWSMITH,S.DHE-PAGANON JRNL TITL NMR STRUCTURE OF THE HLTF HIRAN DOMAIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2L1I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-JUL-10. REMARK 100 THE RCSB ID CODE IS RCSB101838. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : 0.1 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1-1.6 MM [U-100% 13C; U-100% REMARK 210 15N] HLTF HIRAN DOMAIN-1, 20 MM REMARK 210 SODIUM PHOSPHATE-2, 100 MM SODIUM REMARK 210 CHLORIDE-3, 10 % D2O-4, 90% H2O/ REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D CBCA(CO)NH; 3D HBHA(CO)NH; 3D REMARK 210 HNCA; 3D HNCO; 3D 1H-15N NOESY; REMARK 210 3D 1H-13C NOESY; 3D HCCH-TOCSY; REMARK 210 3D CC-TOCSY; 3D ARO-NOESY; 3D ARO REMARK 210 -TOCSY; 2D ARO-HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : SPARKY, CYANA, ABACUS, MDDNMR, REMARK 210 TALOS REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLN A 86 107.20 -161.61 REMARK 500 1 ASN A 106 -27.89 -32.31 REMARK 500 1 ASN A 125 35.90 -87.27 REMARK 500 1 LYS A 126 14.28 -19.10 REMARK 500 1 PHE A 142 140.22 -173.26 REMARK 500 1 THR A 143 86.95 -66.19 REMARK 500 2 PHE A 60 -73.45 -100.39 REMARK 500 2 TYR A 72 -43.94 -137.19 REMARK 500 2 ASN A 106 -50.94 65.58 REMARK 500 2 ASN A 125 33.93 -88.82 REMARK 500 2 LYS A 126 15.69 -18.32 REMARK 500 2 MET A 148 85.34 -69.82 REMARK 500 3 HIS A 66 10.55 -151.73 REMARK 500 3 TYR A 73 90.39 60.61 REMARK 500 3 ASN A 106 -63.05 67.90 REMARK 500 3 ASN A 125 33.46 -82.63 REMARK 500 3 LYS A 126 13.96 -18.42 REMARK 500 3 THR A 143 90.83 -66.90 REMARK 500 4 HIS A 66 85.64 -161.45 REMARK 500 4 LEU A 70 31.84 -89.24 REMARK 500 4 TYR A 72 -46.69 -135.96 REMARK 500 4 GLN A 86 113.47 -160.12 REMARK 500 4 PRO A 92 12.08 -54.10 REMARK 500 4 ASN A 106 -69.55 60.01 REMARK 500 4 GLN A 107 2.11 -63.31 REMARK 500 4 ASN A 125 31.94 -88.82 REMARK 500 4 LYS A 126 14.12 -18.80 REMARK 500 4 PHE A 142 107.87 -38.87 REMARK 500 5 VAL A 58 122.25 -37.23 REMARK 500 5 TYR A 72 -49.73 -138.95 REMARK 500 5 GLN A 86 108.73 -161.91 REMARK 500 5 ASN A 106 -53.81 67.57 REMARK 500 5 GLN A 107 1.07 -61.56 REMARK 500 5 ASN A 125 32.25 -88.13 REMARK 500 5 LYS A 126 15.56 -19.34 REMARK 500 6 PHE A 60 -74.39 -93.28 REMARK 500 6 HIS A 66 88.88 -158.68 REMARK 500 6 LEU A 70 33.53 -99.30 REMARK 500 6 GLN A 86 108.57 -161.28 REMARK 500 6 ASN A 106 13.84 53.25 REMARK 500 6 ASN A 125 35.02 -87.99 REMARK 500 6 LYS A 126 14.56 -16.10 REMARK 500 7 HIS A 66 87.06 -168.16 REMARK 500 7 GLN A 86 114.21 -160.96 REMARK 500 7 ASN A 106 -73.52 60.14 REMARK 500 7 GLN A 107 4.84 -65.88 REMARK 500 7 VAL A 108 -5.65 -57.86 REMARK 500 7 ASN A 125 34.03 -89.02 REMARK 500 7 LYS A 126 14.10 -15.47 REMARK 500 7 PHE A 142 -155.66 -90.06 REMARK 500 REMARK 500 THIS ENTRY HAS 135 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN A 125 LYS A 126 1 -146.20 REMARK 500 ASN A 125 LYS A 126 2 -147.70 REMARK 500 ASN A 125 LYS A 126 3 -148.05 REMARK 500 ASN A 125 LYS A 126 4 -146.65 REMARK 500 ASN A 125 LYS A 126 5 -146.20 REMARK 500 ASN A 125 LYS A 126 6 -146.29 REMARK 500 ASN A 125 LYS A 126 7 -147.65 REMARK 500 ASN A 125 LYS A 126 8 -143.73 REMARK 500 ASN A 125 LYS A 126 9 -145.13 REMARK 500 ASN A 125 LYS A 126 10 -144.84 REMARK 500 ASN A 125 LYS A 126 11 -147.16 REMARK 500 ASN A 125 LYS A 126 12 -146.09 REMARK 500 ASN A 125 LYS A 126 13 -143.98 REMARK 500 ASN A 125 LYS A 126 14 -146.54 REMARK 500 ASN A 125 LYS A 126 15 -148.56 REMARK 500 ASN A 125 LYS A 126 16 -145.67 REMARK 500 ASN A 125 LYS A 126 18 -146.10 REMARK 500 ASN A 125 LYS A 126 19 -145.77 REMARK 500 ASN A 125 LYS A 126 20 -144.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 3 ASN A 125 -10.44 REMARK 500 4 ASN A 125 -10.10 REMARK 500 11 ASN A 125 -10.08 REMARK 500 18 ASN A 125 -10.13 REMARK 500 19 ASN A 125 -10.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 17085 RELATED DB: BMRB DBREF 2L1I A 51 171 UNP Q05DQ5 Q05DQ5_HUMAN 51 171 SEQADV 2L1I GLY A 50 UNP Q05DQ5 EXPRESSION TAG SEQRES 1 A 122 GLY SER ASP GLU GLU VAL ASP SER VAL LEU PHE GLY SER SEQRES 2 A 122 LEU ARG GLY HIS VAL VAL GLY LEU ARG TYR TYR THR GLY SEQRES 3 A 122 VAL VAL ASN ASN ASN GLU MET VAL ALA LEU GLN ARG ASP SEQRES 4 A 122 PRO ASN ASN PRO TYR ASP LYS ASN ALA ILE LYS VAL ASN SEQRES 5 A 122 ASN VAL ASN GLY ASN GLN VAL GLY HIS LEU LYS LYS GLU SEQRES 6 A 122 LEU ALA GLY ALA LEU ALA TYR ILE MET ASP ASN LYS LEU SEQRES 7 A 122 ALA GLN ILE GLU GLY VAL VAL PRO PHE GLY ALA ASN ASN SEQRES 8 A 122 ALA PHE THR MET PRO LEU HIS MET THR PHE TRP GLY LYS SEQRES 9 A 122 GLU GLU ASN ARG LYS ALA VAL SER ASP GLN LEU LYS LYS SEQRES 10 A 122 HIS GLY PHE LYS LEU HELIX 1 1 GLY A 50 ASP A 56 1 7 HELIX 2 2 TYR A 93 VAL A 100 1 8 HELIX 3 3 GLY A 105 GLY A 109 5 5 HELIX 4 4 HIS A 110 MET A 123 1 14 HELIX 5 5 LYS A 153 GLY A 168 1 16 SHEET 1 A 3 VAL A 83 ALA A 84 0 SHEET 2 A 3 ALA A 128 VAL A 133 -1 O GLY A 132 N VAL A 83 SHEET 3 A 3 HIS A 147 GLY A 152 -1 O TRP A 151 N GLN A 129 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1